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niman
PostPosted: Mon Apr 16, 2012 11:22 am 
Online

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27328
Location: Pittsburgh, PA USA
EPI293965 A/Minnesota/11/2010 (A/H3N2) segment 4 (HA) 3142.3 0.000000e+00 1701/1701 (100%)
EPI361495 A/swine/Indiana/A00968322/2010 (A/H3N2) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%)
EPI291898 A/Wisconsin/12/2010 (A/H3N2) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%)
EPI361505 A/swine/Illinois/A01076719/2010 (A/H3N2) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI361493 A/swine/Indiana/A00968321/2010 (A/H3N2) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI328900 A/Minnesota/11/2010 X-203A (A/H3N2) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI312980 A/Pennsylvania/40/2010 (A/H3N2) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI328898 A/Minnesota/11/2010 X-203 (A/H3N2) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%)
EPI317003 A/swine/Indiana/A0109091/2010 (A/H3N2) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%)
EPI342603 A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%)
EPI324857 A/swine/North Carolina/A01049436/2011 (A/H3N2) segment 4 (HA) 3114.6 0.000000e+00 1696/1701 (99%)
EPI366030 A/Utah/10/2012 (A/H3N2) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%)
EPI339171 A/Maine/06/2011 (A/H3N2) segment 4 (HA) 3109.0 0.000000e+00 1695/1701 (99%)
EPI338561 A/swine/Indiana/A01049745/2011 (A/H3N2) segment 4 (HA) 3105.3 0.000000e+00 1694/1701 (99%)
EPI346440 A/Iowa/08/2011 (A/H3N2) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%)
EPI346432 A/Iowa/07/2011 (A/H3N2) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%)
EPI346424 A/Iowa/09/2011 (A/H3N2) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%)
EPI342704 A/Iowa/09/2011 (A/H3N2) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%)
EPI338562 A/swine/Indiana/A01049744/2011 (A/H3N2) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%)
EPI342696 A/Iowa/08/2011 (A/H3N2) segment 4 (HA) 3099.8 0.000000e+00 1693/1701 (99%)
EPI351662 A/swine/Iowa/A01202659/2011 (A/H3N2) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI351653 A/swine/Iowa/A01202640/2011 (A/H3N2) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI347607 A/Iowa/08/2011 (A/H3N2) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI347604 A/Iowa/07/2011 (A/H3N2) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI338421 A/swine/Indiana/A01049653/2011 (A/H3N2) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI344389 A/Indiana/10/2011 (A/H3N2) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI340984 A/Indiana/10/2011 (A/H3N2) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI348782 A/Indiana/10/2011 X-213 (A/H3N2) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI346493 A/West Virginia/06/2011 (A/H3N2) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI344397 A/Indiana/10/2011 (A/H3N2) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI344405 A/Indiana/08/2011 (A/H3N2) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI333152 A/Indiana/08/2011 (A/H3N2) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI335610 A/Pennsylvania/09/2011 (A/H3N2) segment 4 (HA) 3077.6 0.000000e+00 1689/1701 (99%)
EPI291838 A/Minnesota/09/2010 (A/H3N2) segment 4 (HA) 3057.3 0.000000e+00 1669/1676 (99%)
EPI291893 A/Wisconsin/12/2010 (A/H3N2) segment 4 (HA) 2983.5 0.000000e+00 1617/1618 (99%)
EPI222910 A/swine/Minnesota/7931/2007 (A/H3N2) segment 4 (HA) 2942.8 0.000000e+00 1667/1703 (97%)
EPI337441 A/swine/Minnesota/00611/2005 (A/H3N2) segment 4 (HA) 2931.8 0.000000e+00 1664/1702 (97%)
EPI314335 A/turkey/BC/1529-3/2005 (A/H3N2) segment 4 (HA) 2915.1 0.000000e+00 1661/1702 (97%)
EPI103199 A/swine/Ontario/33853/2005 (A/H3N2) segment 4 (HA) 2915.1 0.000000e+00 1661/1702 (97%)
EPI103127 A/Ontario/RV1273/2005 (A/H3N2) segment 4 (HA) 2915.1 0.000000e+00 1661/1702 (97%)
EPI229372 A/turkey/OH/313053/2004 (A/H3N2) segment 4 (HA) 2909.6 0.000000e+00 1661/1703 (97%)
EPI103181 A/swine/Manitoba/12707/2005 (A/H3N2) segment 4 (HA) 2904.1 0.000000e+00 1659/1702 (97%)
EPI103145 A/swine/Alberta/14722/2005 (A/H3N2) segment 4 (HA) 2904.1 0.000000e+00 1659/1702 (97%)
EPI101389 A/turkey/Ohio/313053/04 (A/H3N2) segment 4 (HA) 2904.1 0.000000e+00 1660/1703 (97%)
EPI289638 A/swine/Minnesota/1300/2007 (A/H3N2) segment 4 (HA) 2893.0 0.000000e+00 1657/1702 (97%)
EPI158876 A/turkey/MN/366767/2005 (A/H3N2) segment 4 (HA) 2893.0 0.000000e+00 1657/1702 (97%)
EPI337384 A/swine/Nebraska/00722/2005 (A/H0) segment 4 (HA) 2881.9 0.000000e+00 1655/1702 (97%)
EPI168645 A/turkey/Minnesota/366767/2005 (A/H3N2) segment 4 (HA) 2876.4 0.000000e+00 1655/1703 (97%)
EPI103217 A/turkey/Ontario/31232/2005 (A/H3N2) segment 4 (HA) 2876.4 0.000000e+00 1655/1703 (97%)
EPI337545 A/swine/Minnesota/00484/2005 (A/H3N2) segment 4 (HA) 2870.8 0.000000e+00 1653/1702 (97%)
EPI228922 A/turkey/Illinois/2004 (A/H3N2) segment 4 (HA) 2870.8 0.000000e+00 1655/1704 (97%)
EPI337349 A/swine/Minnesota/01146/2006 (A/H3N2) segment 4 (HA) 2865.3 0.000000e+00 1652/1702 (97%)
EPI227574 A/turkey/NC/353568/2005 (A/H3N2) segment 4 (HA) 2865.3 0.000000e+00 1652/1702 (97%)
EPI168650 A/turkey/North Carolina/353568/2005 (A/H3N2) segment 4 (HA) 2865.3 0.000000e+00 1652/1702 (97%)
EPI337401 A/swine/Minnesota/02782/2009 (A/H3N2) segment 4 (HA) 2859.7 0.000000e+00 1653/1704 (97%)
EPI166252 A/swine/Minnesota/SG-00234/2005 (A/H3N2) segment 4 (HA) 2857.9 0.000000e+00 1643/1690 (97%)
EPI337529 A/swine/Minnesota/001332/2006 (A/H3N2) segment 4 (HA) 2854.2 0.000000e+00 1651/1703 (96%)
EPI225756 A/swine/Minnesota/66853/2006 (A/H3N2) segment 4 (HA) 2854.2 0.000000e+00 1651/1703 (96%)
EPI98712 A/swine/MI/PU243/04 (A/H3N1) segment 4 (HA) 2850.5 0.000000e+00 1649/1702 (96%)
EPI182817 A/swine/Quebec/4001/2005 (A/H3N2) segment 4 (HA) 2848.7 0.000000e+00 1649/1702 (96%)
EPI222756 A/swine/Minnesota/1145/2007 (A/H3N2) segment 4 (HA) 2843.1 0.000000e+00 1648/1702 (96%)
EPI128344 A/Ontario/1252/2007 (A/H3N2) segment 4 (HA) 2843.1 0.000000e+00 1648/1702 (96%)
EPI166255 A/swine/Minnesota/SG-00235/2007 (A/H3N2) segment 4 (HA) 2841.3 0.000000e+00 1640/1690 (97%)
EPI166258 A/swine/Minnesota/SG-00236/2007 (A/H3N2) segment 4 (HA) 2839.4 0.000000e+00 1639/1689 (97%)
EPI337409 A/swine/Minnesota/01862/2007 (A/H3N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1703 (96%)
EPI225758 A/swine/Minnesota/66960/2006 (A/H3N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1703 (96%)
EPI222674 A/swine/Oklahoma/008722/2007 (A/H3N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1703 (96%)
EPI184448 A/swine/North Carolina/R08-001877-D08-013371/2008 (A/H3N2) segment 4 (HA) 2837.6 0.000000e+00 1648/1703 (96%)
EPI314635 A/swine/QC/2108-2/2009 (A/H3N2) segment 4 (HA) 2832.0 0.000000e+00 1647/1703 (96%)
EPI225753 A/swine/Minnesota/65767/2006 (A/H3N2) segment 4 (HA) 2832.0 0.000000e+00 1647/1703 (96%)
EPI222959 A/swine/Minnesota/578/2007 (A/H3N2) segment 4 (HA) 2832.0 0.000000e+00 1647/1703 (96%)
EPI103163 A/swine/British Columbia/28103/2005 (A/H3N2) segment 4 (HA) 2832.0 0.000000e+00 1647/1703 (96%)
EPI222657 A/swine/Minnesota/5947/2007 (A/H3N2) segment 4 (HA) 2826.5 0.000000e+00 1646/1703 (96%)
EPI166278 A/swine/Minnesota/SG-00242/2006 (A/H3N2) segment 4 (HA) 2826.5 0.000000e+00 1639/1693 (96%)
EPI222961 A/swine/Minnesota/761/2007 (A/H3N2) segment 4 (HA) 2815.4 0.000000e+00 1644/1703 (96%)
EPI314679 A/swine/QC/414/2009 (A/H3N2) segment 4 (HA) 2811.7 0.000000e+00 1645/1704 (96%)
EPI309154 A/swine/Pennsylvania/62170-3/2010 (A/H3N2) segment 4 (HA) 2809.9 0.000000e+00 1642/1702 (96%)
EPI309153 A/swine/Pennsylvania/62170-1/2010 (A/H3N2) segment 4 (HA) 2809.9 0.000000e+00 1642/1702 (96%)
EPI312689 A/swine/Minnesota/239105/2009 (A/H3N2) segment 4 (HA) 2804.3 0.000000e+00 1640/1701 (96%)
EPI259504 A/swine/Minnesota/03008/2010 (A/H3N2) segment 4 (HA) 2804.3 0.000000e+00 1644/1705 (96%)
EPI182824 A/mink/Nova Scotia/1055488/2007 (A/H3N2) segment 4 (HA) 2804.3 0.000000e+00 1641/1702 (96%)
EPI354961 A/swine/Minnesota/A01076196/2010 (A/H3N2) segment 4 (HA) 2800.6 0.000000e+00 1641/1702 (96%)
EPI361432 A/swine/Minnesota/A01047396/2011 (A/H3N2) segment 4 (HA) 2798.8 0.000000e+00 1639/1701 (96%)
EPI317007 A/swine/Iowa/A01049112/2010 (A/H3N2) segment 4 (HA) 2798.8 0.000000e+00 1643/1705 (96%)
EPI291872 A/Pennsylvania/14/2010 (A/H3N2) segment 4 (HA) 2798.8 0.000000e+00 1640/1702 (96%)
EPI291870 A/Pennsylvania/14/2010 (A/H3N2) segment 4 (HA) 2798.8 0.000000e+00 1640/1702 (96%)
EPI291865 A/Pennsylvania/14/2010 (A/H3N2) segment 4 (HA) 2798.8 0.000000e+00 1640/1702 (96%)
EPI222682 A/swine/Oklahoma/011506/2007 (A/H3N2) segment 4 (HA) 2798.8 0.000000e+00 1641/1703 (96%)
EPI347613 A/Pennsylvania/14/2010 (A/H3N2) segment 4 (HA) 2795.1 0.000000e+00 1639/1702 (96%)
EPI338542 A/swine/Nebraska/A01049937/2011 (A/H3N2) segment 4 (HA) 2793.3 0.000000e+00 1642/1705 (96%)
EPI318095 A/swine/Iowa/A01049113/2010 (A/H3N2) segment 4 (HA) 2793.3 0.000000e+00 1642/1705 (96%)
EPI324849 A/swine/Iowa/A01049254/2010 (A/H3N2) segment 4 (HA) 2787.7 0.000000e+00 1640/1704 (96%)
EPI324844 A/swine/Nebraska/A01049235/2010 (A/H3N2) segment 4 (HA) 2787.7 0.000000e+00 1641/1705 (96%)
EPI314796 A/swine/Pennsylvania/602170-4/2010 (A/H3N2) segment 4 (HA) 2787.7 0.000000e+00 1638/1702 (96%)
EPI314666 A/swine/QC/1698-2/2009 (A/H3N2) segment 4 (HA) 2787.7 0.000000e+00 1640/1704 (96%)
EPI314665 A/swine/QC/1698-1/2009 (A/H3N2) segment 4 (HA) 2787.7 0.000000e+00 1640/1704 (96%)
EPI318106 A/swine/Iowa/A01049185/2010 (A/H3N2) segment 4 (HA) 2782.2 0.000000e+00 1638/1703 (96%)
EPI314667 A/swine/QC/1698-4/2009 (A/H3N2) segment 4 (HA) 2782.2 0.000000e+00 1639/1704 (96%)
EPI314643 A/swine/QC/382/2009 (A/H3N2) segment 4 (HA) 2782.2 0.000000e+00 1638/1703 (96%)
EPI361497 A/swine/Illinois/A01047183/2010 (A/H3N2) segment 4 (HA) 2778.5 0.000000e+00 1631/1693 (96%)

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niman
PostPosted: Mon Apr 16, 2012 11:25 am 
Online

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27328
Location: Pittsburgh, PA USA
EPI351680 A/swine/Indiana/A00968321/2010 (A/H3N2) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%)
EPI351664 A/swine/Iowa/A01202659/2011 (A/H3N2) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%)
EPI344390 A/Indiana/10/2011 (A/H3N2) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%)
EPI344383 A/Indiana/10/2011 (A/H3N2) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%)
EPI340977 A/Indiana/10/2011 (A/H3N2) segment 5 (NP) 2758.2 0.000000e+00 1495/1496 (99%)
EPI351686 A/swine/Indiana/A00968322/2010 (A/H3N2) segment 5 (NP) 2752.6 0.000000e+00 1494/1496 (99%)
EPI351654 A/swine/Iowa/A01202640/2011 (A/H3N2) segment 5 (NP) 2752.6 0.000000e+00 1494/1496 (99%)
EPI339164 A/Maine/06/2011 (A/H3N2) segment 5 (NP) 2752.6 0.000000e+00 1494/1496 (99%)
EPI312981 A/Pennsylvania/40/2010 (A/H3N2) segment 5 (NP) 2752.6 0.000000e+00 1494/1496 (99%)
EPI293966 A/Minnesota/11/2010 (A/H3N2) segment 5 (NP) 2748.9 0.000000e+00 1493/1496 (99%)
EPI291892 A/Wisconsin/12/2010 (A/H3N2) segment 5 (NP) 2748.9 0.000000e+00 1493/1496 (99%)
EPI342602 A/swine/NY/A01104005/2011 (A/H3N2) segment 5 (NP) 2747.1 0.000000e+00 1493/1496 (99%)
EPI344398 A/Indiana/08/2011 (A/H3N2) segment 5 (NP) 2741.5 0.000000e+00 1492/1496 (99%)
EPI335630 A/Indiana/08/2011 (A/H3N2) segment 5 (NP) 2741.5 0.000000e+00 1492/1496 (99%)
EPI335619 A/Pennsylvania/11/2011 (A/H3N2) segment 5 (NP) 2741.5 0.000000e+00 1492/1496 (99%)
EPI333146 A/Indiana/08/2011 (A/H3N2) segment 5 (NP) 2741.5 0.000000e+00 1492/1496 (99%)
EPI291864 A/Pennsylvania/14/2010 (A/H3N2) segment 5 (NP) 2741.5 0.000000e+00 1492/1496 (99%)
EPI335611 A/Pennsylvania/09/2011 (A/H3N2) segment 5 (NP) 2736.0 0.000000e+00 1491/1496 (99%)
EPI366023 A/Utah/10/2012 (A/H3N2) segment 5 (NP) 2730.5 0.000000e+00 1490/1496 (99%)
EPI346486 A/West Virginia/06/2011 (A/H3N2) segment 5 (NP) 2730.5 0.000000e+00 1490/1496 (99%)
EPI346494 A/Minnesota/19/2011 (A/H1N2) segment 5 (NP) 2724.9 0.000000e+00 1489/1496 (99%)
EPI346433 A/Iowa/08/2011 (A/H3N2) segment 5 (NP) 2724.9 0.000000e+00 1489/1496 (99%)
EPI346425 A/Iowa/07/2011 (A/H3N2) segment 5 (NP) 2724.9 0.000000e+00 1489/1496 (99%)
EPI346417 A/Iowa/09/2011 (A/H3N2) segment 5 (NP) 2724.9 0.000000e+00 1489/1496 (99%)
EPI342689 A/Iowa/08/2011 (A/H3N2) segment 5 (NP) 2724.9 0.000000e+00 1489/1496 (99%)
EPI342681 A/Iowa/07/2011 (A/H3N2) segment 5 (NP) 2724.9 0.000000e+00 1489/1496 (99%)
EPI314792 A/swine/Minnesota/A01047613/2010 (A/H1N1) segment 5 (NP) 2724.9 0.000000e+00 1489/1496 (99%)
EPI302683 A/swine/Pennsylvania/62170-4/2010 (A/H3N2) segment 5 (NP) 2724.9 0.000000e+00 1489/1496 (99%)
EPI302682 A/swine/Pennsylvania/62170-3/2010 (A/H3N2) segment 5 (NP) 2724.9 0.000000e+00 1489/1496 (99%)
EPI302670 A/swine/Pennsylvania/62170-1/2010 (A/H3N2) segment 5 (NP) 2719.4 0.000000e+00 1488/1496 (99%)
EPI361473 A/swine/Iowa/A01049036/2010 (A/H3N2) segment 5 (NP) 2713.8 0.000000e+00 1487/1496 (99%)
EPI337039 A/swine/Iowa/A01049035/2010 (A/H3N2) segment 5 (NP) 2713.8 0.000000e+00 1487/1496 (99%)
EPI337034 A/swine/Iowa/A01049034/2010 (A/H3N2) segment 5 (NP) 2713.8 0.000000e+00 1487/1496 (99%)
EPI302671 A/swine/Pennsylvania/62170-2/2010 (A/H3N2) segment 5 (NP) 2713.8 0.000000e+00 1487/1496 (99%)
EPI342697 A/Iowa/09/2011 (A/H3N2) segment 5 (NP) 2710.2 0.000000e+00 1481/1488 (99%)
EPI244301 A/Kansas/13/2009 (A/H3N2) segment 5 (NP) 2702.8 0.000000e+00 1485/1496 (99%)
EPI346917 A/Wisconsin/28/2011 (A/H1N1) segment 5 (NP) 2700.9 0.000000e+00 1484/1495 (99%)
EPI291822 A/Michigan/09/2007 (A/H1N2) segment 5 (NP) 2691.7 0.000000e+00 1483/1496 (99%)
EPI353833 A/swine/Illinois/A01047528/2010 (A/H3N2) segment 5 (NP) 2675.1 0.000000e+00 1480/1496 (98%)
EPI337532 A/swine/Minnesota/001332/2006 (A/H3N2) segment 5 (NP) 2675.1 0.000000e+00 1480/1496 (98%)
EPI323268 A/swine/Minnesota/66853/2006 (A/H3N2) segment 5 (NP) 2675.1 0.000000e+00 1480/1496 (98%)
EPI361425 A/swine/Illinois/A01047188/2010 (A/H3N2) segment 5 (NP) 2669.5 0.000000e+00 1479/1496 (98%)
EPI337596 A/swine/Illinois/01917/2007 (A/H1N1) segment 5 (NP) 2669.5 0.000000e+00 1479/1496 (98%)
EPI337588 A/swine/Illinois/01918/2007 (A/H1N1) segment 5 (NP) 2669.5 0.000000e+00 1479/1496 (98%)
EPI337412 A/swine/Minnesota/01862/2007 (A/H3N2) segment 5 (NP) 2669.5 0.000000e+00 1479/1496 (98%)
EPI323262 A/swine/Minnesota/578/2007 (A/H3N2) segment 5 (NP) 2669.5 0.000000e+00 1479/1496 (98%)
EPI295328 A/swine/South Dakota/152B/2009 (A/H1N2) segment 5 (NP) 2669.5 0.000000e+00 1479/1496 (98%)
EPI184493 A/swine/Minnesota/SG-00239/2007 (A/H1N2) segment 5 (NP) 2669.5 0.000000e+00 1479/1496 (98%)
EPI337556 A/swine/Illinois/02251/2008 (A/H1N1) segment 5 (NP) 2664.0 0.000000e+00 1478/1496 (98%)
EPI361441 A/swine/Illinois/A01047529/2010 (A/H3N2) segment 5 (NP) 2658.4 0.000000e+00 1477/1496 (98%)
EPI353838 A/swine/Illinois/A01076719/2010 (A/H3N2) segment 5 (NP) 2658.4 0.000000e+00 1477/1496 (98%)
EPI337564 A/swine/Illinois/01981/2008 (A/H1N1) segment 5 (NP) 2658.4 0.000000e+00 1477/1496 (98%)
EPI312650 A/swine/Indiana/240218/2010 (A/H1N2) segment 5 (NP) 2658.4 0.000000e+00 1477/1496 (98%)
EPI281256 A/swine/Minnesota/02011/2008 (A/H1N2) segment 5 (NP) 2654.8 0.000000e+00 1471/1488 (98%)
EPI337580 A/swine/Illinois/02385/2008 (A/H1N1) segment 5 (NP) 2652.9 0.000000e+00 1476/1496 (98%)
EPI158879 A/turkey/MN/366767/2005 (A/H3N2) segment 5 (NP) 2652.9 0.000000e+00 1476/1496 (98%)
EPI337604 A/swine/Illinois/02510/2009 (A/H1N1) segment 5 (NP) 2647.4 0.000000e+00 1475/1496 (98%)
EPI337436 A/swine/Minnesota/02905/2009 (A/H1N1) segment 5 (NP) 2647.4 0.000000e+00 1475/1496 (98%)
EPI337396 A/swine/Illinois/02064/2008 (A/H1N1) segment 5 (NP) 2647.4 0.000000e+00 1475/1496 (98%)
EPI337372 A/swine/Illinois/02238/2008 (A/H1N1) segment 5 (NP) 2647.4 0.000000e+00 1475/1496 (98%)
EPI255762 A/swine/MN/48683/2002 (A/H1N1) segment 5 (NP) 2647.4 0.000000e+00 1475/1496 (98%)
EPI164042 A/swine/Korea/CAS08/2005 (A/H1N1) segment 5 (NP) 2647.4 0.000000e+00 1475/1496 (98%)
EPI281255 A/swine/Missouri/02060/2008 (A/H1N1) segment 5 (NP) 2645.5 0.000000e+00 1472/1492 (98%)
EPI337378 A/swine/Minnesota/001200/2006 (A/H1N1) segment 5 (NP) 2641.8 0.000000e+00 1474/1496 (98%)
EPI337359 A/swine/Minnesota/SG1138/2002 (A/H1N1) segment 5 (NP) 2641.8 0.000000e+00 1474/1496 (98%)
EPI312706 A/swine/North Carolina/239108/2010 (A/H1N2) segment 5 (NP) 2641.8 0.000000e+00 1474/1496 (98%)
EPI164041 A/swine/Korea/CAN01/2004 (A/H1N1) segment 5 (NP) 2641.8 0.000000e+00 1474/1496 (98%)
EPI281252 A/swine/Nebraska/02013/2008 (A/H1N1) segment 5 (NP) 2640.0 0.000000e+00 1472/1493 (98%)
EPI351692 A/swine/Indiana/A01049349/2010 (A/H3N2) segment 5 (NP) 2636.3 0.000000e+00 1473/1496 (98%)
EPI347205 A/swine/Ohio/FAH2-1/2008 (A/H1N1) segment 5 (NP) 2636.3 0.000000e+00 1471/1494 (98%)
EPI337572 A/swine/Illinois/02695/2009 (A/H1N1) segment 5 (NP) 2636.3 0.000000e+00 1473/1496 (98%)
EPI291816 A/Iowa/16/2009 (A/H3N2) segment 5 (NP) 2636.3 0.000000e+00 1473/1496 (98%)
EPI291851 A/Missouri/04/2006 (A/H1N1) segment 5 (NP) 2634.4 0.000000e+00 1470/1492 (98%)
EPI337352 A/swine/Minnesota/01146/2006 (A/H3N2) segment 5 (NP) 2630.7 0.000000e+00 1472/1496 (98%)
EPI335052 A/swine/Minnesota/6998/2003 (A/H1N1) segment 5 (NP) 2630.7 0.000000e+00 1472/1496 (98%)
EPI323256 A/swine/Minnesota/1300/2007 (A/H3N2) segment 5 (NP) 2630.7 0.000000e+00 1472/1496 (98%)
EPI292006 A/swine/Iowa/H02NJ56371/2002 (A/H1N1) segment 5 (NP) 2630.7 0.000000e+00 1472/1496 (98%)
EPI291993 A/swine/Iowa/H03UWF2/2003 (A/H1N1) segment 5 (NP) 2630.7 0.000000e+00 1472/1496 (98%)
EPI291884 A/Texas/14/2008 (A/H1N1) segment 5 (NP) 2630.7 0.000000e+00 1472/1496 (98%)
EPI168646 A/turkey/Minnesota/366767/2005 (A/H3N2) segment 5 (NP) 2630.7 0.000000e+00 1472/1496 (98%)
EPI337540 A/swine/Minnesota/02475/2008 (A/H1N1) segment 5 (NP) 2625.2 0.000000e+00 1471/1496 (98%)
EPI292005 A/swine/Iowa/H02NJ56391/2002 (A/H1N1) segment 5 (NP) 2625.2 0.000000e+00 1471/1496 (98%)
EPI292001 A/swine/Iowa/H03G1/2003 (A/H1N1) segment 5 (NP) 2625.2 0.000000e+00 1471/1496 (98%)
EPI291995 A/swine/Iowa/H03LS4/2003 (A/H1N1) segment 5 (NP) 2625.2 0.000000e+00 1471/1496 (98%)
EPI337365 A/swine/Minnesota/00709/2005 (A/H3N2) segment 5 (NP) 2619.7 0.000000e+00 1470/1496 (98%)
EPI291994 A/swine/Iowa/H03US3/2003 (A/H1N1) segment 5 (NP) 2619.7 0.000000e+00 1470/1496 (98%)
EPI281254 A/swine/North Carolina/02023/2008 (A/H1N1) segment 5 (NP) 2616.0 0.000000e+00 1464/1488 (98%)
EPI354949 A/swine/North Carolina/A01076178/2009 (A/H3N2) segment 5 (NP) 2608.6 0.000000e+00 1468/1496 (98%)
EPI353828 A/swine/Illinois/A01047183/2010 (A/H3N2) segment 5 (NP) 2608.6 0.000000e+00 1468/1496 (98%)
EPI292004 A/swine/Iowa/H02PW7/2002 (A/H1N1) segment 5 (NP) 2608.6 0.000000e+00 1468/1496 (98%)
EPI291999 A/swine/Iowa/H03HO7/2003 (A/H3N2) segment 5 (NP) 2608.6 0.000000e+00 1468/1496 (98%)
EPI291806 A/Iowa/05/2007 (A/H1N1) segment 5 (NP) 2608.6 0.000000e+00 1468/1496 (98%)
EPI361465 A/swine/Iowa/A01049033/2010 (A/H3N2) segment 5 (NP) 2603.0 0.000000e+00 1467/1496 (98%)
EPI337524 A/swine/Minnesota/001581/2007 (A/H1N1) segment 5 (NP) 2603.0 0.000000e+00 1467/1496 (98%)
EPI337404 A/swine/Minnesota/02782/2009 (A/H3N2) segment 5 (NP) 2603.0 0.000000e+00 1468/1497 (98%)
EPI307930 A/swine/Pennsylvania/057108-1/2010 (A/H3N2) segment 5 (NP) 2603.0 0.000000e+00 1468/1497 (98%)
EPI291998 A/swine/Iowa/H03HS5/2003 (A/H1N1) segment 5 (NP) 2597.5 0.000000e+00 1466/1496 (97%)
EPI291829 A/Minnesota/03/2008 (A/H1N1) segment 5 (NP) 2597.5 0.000000e+00 1467/1497 (97%)
EPI337500 A/swine/Minnesota/SG1144/2006 (A/H1N1) segment 5 (NP) 2592.0 0.000000e+00 1465/1496 (97%)
EPI337388 A/swine/Nebraska/00722/2005 (A/H0) segment 5 (NP) 2592.0 0.000000e+00 1465/1496 (97%)

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niman
PostPosted: Mon Apr 16, 2012 11:27 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 27328
Location: Pittsburgh, PA USA
EPI361506 A/swine/Illinois/A01076719/2010 (A/H3N2) segment 6 (NA) 2599.4 0.000000e+00 1409/1410 (99%)
EPI361496 A/swine/Indiana/A00968322/2010 (A/H3N2) segment 6 (NA) 2599.4 0.000000e+00 1409/1410 (99%)
EPI361494 A/swine/Indiana/A00968321/2010 (A/H3N2) segment 6 (NA) 2599.4 0.000000e+00 1409/1410 (99%)
EPI291897 A/Wisconsin/12/2010 (A/H3N2) segment 6 (NA) 2595.7 0.000000e+00 1408/1410 (99%)
EPI291891 A/Wisconsin/12/2010 (A/H3N2) segment 6 (NA) 2564.3 0.000000e+00 1392/1394 (99%)
EPI312982 A/Pennsylvania/40/2010 (A/H3N2) segment 6 (NA) 2553.2 0.000000e+00 1386/1388 (99%)
EPI291836 A/Minnesota/09/2010 (A/H3N2) segment 6 (NA) 2547.7 0.000000e+00 1385/1388 (99%)
EPI317023 A/swine/Illinois/A01049074/2010 (A/H1N2) segment 6 (NA) 2532.9 0.000000e+00 1397/1410 (99%)
EPI338458 A/swine/Iowa/A01049525/2011 (A/H1N2) segment 6 (NA) 2510.7 0.000000e+00 1393/1410 (98%)
EPI222956 A/swine/Minnesota/1300/2007 (A/H3N2) segment 6 (NA) 2505.2 0.000000e+00 1392/1410 (98%)
EPI337531 A/swine/Minnesota/001332/2006 (A/H3N2) segment 6 (NA) 2499.6 0.000000e+00 1391/1410 (98%)
EPI184450 A/swine/North Carolina/R08-001877-D08-013371/2008 (A/H3N2) segment 6 (NA) 2499.6 0.000000e+00 1391/1410 (98%)
EPI222960 A/swine/Minnesota/578/2007 (A/H3N2) segment 6 (NA) 2483.0 0.000000e+00 1388/1410 (98%)
EPI337403 A/swine/Minnesota/02782/2009 (A/H3N2) segment 6 (NA) 2477.5 0.000000e+00 1387/1410 (98%)
EPI291821 A/Michigan/09/2007 (A/H1N2) segment 6 (NA) 2471.9 0.000000e+00 1386/1410 (98%)
EPI354978 A/swine/North Carolina/A01076204/2010 (A/H3N2) segment 6 (NA) 2455.3 0.000000e+00 1383/1410 (98%)
EPI337334 A/swine/Kentucky/SG1118/2003 (A/H0) segment 6 (NA) 2455.3 0.000000e+00 1383/1410 (98%)
EPI229374 A/turkey/OH/313053/2004 (A/H3N2) segment 6 (NA) 2455.3 0.000000e+00 1383/1410 (98%)
EPI101393 A/turkey/Ohio/313053/04 (A/H3N2) segment 6 (NA) 2455.3 0.000000e+00 1383/1410 (98%)
EPI227576 A/turkey/NC/353568/2005 (A/H3N2) segment 6 (NA) 2449.8 0.000000e+00 1382/1410 (98%)
EPI225757 A/swine/Minnesota/66960/2006 (A/H3N2) segment 6 (NA) 2449.8 0.000000e+00 1382/1410 (98%)
EPI354993 A/swine/Minnesota/A01076218/2010 (A/H3N2) segment 6 (NA) 2444.2 0.000000e+00 1381/1410 (97%)
EPI314333 A/turkey/BC/1529-3/2005 (A/H3N2) segment 6 (NA) 2444.2 0.000000e+00 1381/1410 (97%)
EPI354986 A/swine/North Carolina/A01076212/2010 (A/H3N2) segment 6 (NA) 2438.7 0.000000e+00 1380/1410 (97%)
EPI307939 A/swine/Iowa/A01057188/2010 (A/H3N2) segment 6 (NA) 2438.7 0.000000e+00 1380/1410 (97%)
EPI182818 A/swine/Quebec/4001/2005 (A/H3N2) segment 6 (NA) 2438.7 0.000000e+00 1380/1410 (97%)
EPI103212 A/turkey/Ontario/31232/2005 (A/H3N2) segment 6 (NA) 2436.9 0.000000e+00 1379/1409 (97%)
EPI103158 A/swine/British Columbia/28103/2005 (A/H3N2) segment 6 (NA) 2436.9 0.000000e+00 1379/1409 (97%)
EPI337547 A/swine/Minnesota/00484/2005 (A/H3N2) segment 6 (NA) 2433.2 0.000000e+00 1379/1410 (97%)
EPI337443 A/swine/Minnesota/00611/2005 (A/H3N2) segment 6 (NA) 2433.2 0.000000e+00 1379/1410 (97%)
EPI337411 A/swine/Minnesota/01862/2007 (A/H3N2) segment 6 (NA) 2433.2 0.000000e+00 1379/1410 (97%)
EPI337343 A/swine/Iowa/01700/2007 (A/H3N2) segment 6 (NA) 2433.2 0.000000e+00 1379/1410 (97%)
EPI318089 A/swine/Iowa/A01049160/2010 (A/H3N2) segment 6 (NA) 2433.2 0.000000e+00 1379/1410 (97%)
EPI295334 A/swine/South Dakota/152B/2009 (A/H1N2) segment 6 (NA) 2433.2 0.000000e+00 1379/1410 (97%)
EPI292294 A/swine/Minnesota/44837-3/2009 (A/H1N2) segment 6 (NA) 2433.2 0.000000e+00 1379/1410 (97%)
EPI168652 A/turkey/North Carolina/353568/2005 (A/H3N2) segment 6 (NA) 2433.2 0.000000e+00 1379/1410 (97%)
EPI103194 A/swine/Ontario/33853/2005 (A/H3N2) segment 6 (NA) 2433.2 0.000000e+00 1379/1410 (97%)
EPI103122 A/Ontario/RV1273/2005 (A/H3N2) segment 6 (NA) 2433.2 0.000000e+00 1379/1410 (97%)
EPI337952 A/swine/Illinois/02450/2008 (A/H0) segment 6 (NA) 2427.6 0.000000e+00 1378/1410 (97%)
EPI324812 A/swine/Pennsylvania/A01049256/2010 (A/H3N2) segment 6 (NA) 2427.6 0.000000e+00 1378/1410 (97%)
EPI302645 A/swine/Illinois/53612-1/2009 (A/H3N2) segment 6 (NA) 2427.6 0.000000e+00 1378/1410 (97%)
EPI235273 A/swine/North Carolina/2003 (A/H3N2) segment 6 (NA) 2427.6 0.000000e+00 1378/1410 (97%)
EPI228924 A/turkey/Illinois/2004 (A/H3N2) segment 6 (NA) 2427.6 0.000000e+00 1378/1410 (97%)
EPI337386 A/swine/Nebraska/00722/2005 (A/H0) segment 6 (NA) 2422.1 0.000000e+00 1377/1410 (97%)
EPI318091 A/swine/Illinois/A01049164/2010 (A/H1N2) segment 6 (NA) 2422.1 0.000000e+00 1378/1411 (97%)
EPI103176 A/swine/Manitoba/12707/2005 (A/H3N2) segment 6 (NA) 2422.1 0.000000e+00 1378/1411 (97%)
EPI361442 A/swine/Illinois/A01047529/2010 (A/H3N2) segment 6 (NA) 2416.5 0.000000e+00 1376/1410 (97%)
EPI337364 A/swine/Minnesota/00709/2005 (A/H3N2) segment 6 (NA) 2416.5 0.000000e+00 1377/1411 (97%)
EPI302660 A/swine/Illinois/53612-6/2010 (A/H3N2) segment 6 (NA) 2411.0 0.000000e+00 1375/1410 (97%)
EPI302657 A/swine/Illinois/53612-5/2009 (A/H3N2) segment 6 (NA) 2411.0 0.000000e+00 1375/1410 (97%)
EPI302654 A/swine/Illinois/53612-4/2009 (A/H3N2) segment 6 (NA) 2411.0 0.000000e+00 1375/1410 (97%)
EPI158878 A/turkey/MN/366767/2005 (A/H3N2) segment 6 (NA) 2411.0 0.000000e+00 1375/1410 (97%)
EPI337351 A/swine/Minnesota/01146/2006 (A/H3N2) segment 6 (NA) 2405.5 0.000000e+00 1374/1410 (97%)
EPI324811 A/swine/Iowa/A01049254/2010 (A/H3N2) segment 6 (NA) 2405.5 0.000000e+00 1375/1411 (97%)
EPI302648 A/swine/Illinois/53612-2/2009 (A/H3N2) segment 6 (NA) 2405.5 0.000000e+00 1374/1410 (97%)
EPI168647 A/turkey/Minnesota/366767/2005 (A/H3N2) segment 6 (NA) 2405.5 0.000000e+00 1374/1410 (97%)
EPI103140 A/swine/Alberta/14722/2005 (A/H3N2) segment 6 (NA) 2405.5 0.000000e+00 1375/1411 (97%)
EPI361498 A/swine/Illinois/A01047183/2010 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1374/1411 (97%)
EPI361426 A/swine/Illinois/A01047188/2010 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1374/1411 (97%)
EPI358524 A/England/520/2003 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1374/1411 (97%)
EPI324805 A/swine/Iowa/A01049228/2010 (A/H1N2) segment 6 (NA) 2399.9 0.000000e+00 1374/1411 (97%)
EPI302651 A/swine/Illinois/53612-3/2009 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1373/1410 (97%)
EPI222962 A/swine/Minnesota/761/2007 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1373/1410 (97%)
EPI139315 A/Denmark/4/2002 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1375/1412 (97%)
EPI139304 A/Denmark/01/2002 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1375/1412 (97%)
EPI94378 A/Canterbury/56/2002 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1375/1412 (97%)
EPI20187 A/Denmark/63/03 (A/H3N2) segment 6 (NA) 2399.9 0.000000e+00 1374/1411 (97%)
EPI358306 A/Scotland/50/2003 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1373/1411 (97%)
EPI222656 A/swine/Minnesota/5947/2007 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI95749 A/Canterbury/64/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI95673 A/Canterbury/15/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI95635 A/Canterbury/09/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI95081 A/Canterbury/46/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI95043 A/Canterbury/13/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI95024 A/Canterbury/04/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94853 A/Canterbury/66/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94834 A/Canterbury/58/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94815 A/Canterbury/44/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94682 A/Canterbury/20/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94644 A/Canterbury/14/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94492 A/Canterbury/81/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94454 A/Canterbury/75/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94397 A/Canterbury/59/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94321 A/Canterbury/49/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94264 A/Canterbury/41/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94226 A/Canterbury/22/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94188 A/Canterbury/16/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94074 A/Canterbury/05/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94055 A/Canterbury/02/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI94036 A/Canterbury/01/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI93257 A/Canterbury/443/2003 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1373/1411 (97%)
EPI93200 A/Canterbury/440/2003 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1373/1411 (97%)
EPI93048 A/Canterbury/431/2003 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1373/1411 (97%)
EPI92497 A/Canterbury/386/2003 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1373/1411 (97%)
EPI83443 A/New York/406/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI62224 A/Auckland/614/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI53073 A/New York/99/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI37434 A/Dunedin/3/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI36047 A/Waikato/52/2002 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)
EPI28237 A/New York/80/2001 (A/H3N2) segment 6 (NA) 2394.4 0.000000e+00 1374/1412 (97%)

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niman
PostPosted: Mon Apr 16, 2012 11:28 am 
Online

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27328
Location: Pittsburgh, PA USA
EPI361507 A/swine/Illinois/A01076719/2010 (A/H3N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI354987 A/swine/North Carolina/A01076212/2010 (A/H3N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI354979 A/swine/North Carolina/A01076204/2010 (A/H3N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI354971 A/swine/Minnesota/A01076199/2010 (A/H3N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI351687 A/swine/Indiana/A00968322/2010 (A/H3N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI351681 A/swine/Indiana/A00968321/2010 (A/H3N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI338511 A/swine/Indiana/A01049744/2011 (A/H3N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI338510 A/swine/Indiana/A01049745/2011 (A/H3N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI338508 A/swine/Iowa/A01049846/2011 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI338502 A/swine/Illinois/A01049952/2011 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI338501 A/swine/Illinois/A01049967/2011 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI338500 A/swine/Illinois/A01049968/2011 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI338499 A/swine/Illinois/A01049969/2011 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI338489 A/swine/Iowa/A01049506/2011 (A/H1N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI338479 A/swine/Indiana/A01049653/2011 (A/H3N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI324838 A/swine/North Carolina/A01049436/2011 (A/H3N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI317039 A/swine/Indiana/A0109091/2010 (A/H3N2) segment 7 (MP) 1797.9 0.000000e+00 976/978 (99%)
EPI361467 A/swine/Iowa/A01049033/2010 (A/H3N2) segment 7 (MP) 1792.4 0.000000e+00 975/978 (99%)
EPI361443 A/swine/Illinois/A01047529/2010 (A/H3N2) segment 7 (MP) 1792.4 0.000000e+00 975/978 (99%)
EPI318077 A/swine/Iowa/A01049160/2010 (A/H3N2) segment 7 (MP) 1792.4 0.000000e+00 975/978 (99%)
EPI316956 A/swine/Iowa/A01049032/2010 (A/H3N2) segment 7 (MP) 1792.4 0.000000e+00 975/978 (99%)
EPI316955 A/swine/Iowa/A01049031/2010 (A/H3N2) segment 7 (MP) 1792.4 0.000000e+00 975/978 (99%)
EPI302687 A/swine/Pennsylvania/62170-4/2010 (A/H3N2) segment 7 (MP) 1792.4 0.000000e+00 975/978 (99%)
EPI302678 A/swine/Pennsylvania/62170-3/2010 (A/H3N2) segment 7 (MP) 1792.4 0.000000e+00 975/978 (99%)
EPI302675 A/swine/Pennsylvania/62170-2/2010 (A/H3N2) segment 7 (MP) 1792.4 0.000000e+00 975/978 (99%)
EPI302666 A/swine/Pennsylvania/62170-1/2010 (A/H3N2) segment 7 (MP) 1792.4 0.000000e+00 975/978 (99%)
EPI358126 A/swine/North Carolina/A01202768/2011 (A/H3N2) segment 7 (MP) 1786.8 0.000000e+00 974/978 (99%)
EPI347608 A/Minnesota/19/2011 (A/H1N2) segment 7 (MP) 1786.8 0.000000e+00 974/978 (99%)
EPI337434 A/swine/Minnesota/02905/2009 (A/H1N1) segment 7 (MP) 1786.8 0.000000e+00 974/978 (99%)
EPI293968 A/Minnesota/11/2010 (A/H3N2) segment 7 (MP) 1785.0 0.000000e+00 967/968 (99%)
EPI291890 A/Wisconsin/12/2010 (A/H3N2) segment 7 (MP) 1783.1 0.000000e+00 966/967 (99%)
EPI358127 A/swine/Iowa/A01203001/2011 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 973/978 (99%)
EPI353679 A/swine/North Carolina/A01048807/2011 (A/H1N2) segment 7 (MP) 1781.3 0.000000e+00 973/978 (99%)
EPI353678 A/swine/North Carolina/A01048779/2011 (A/H3N2) segment 7 (MP) 1781.3 0.000000e+00 973/978 (99%)
EPI353676 A/swine/North Carolina/A01202766/2011 (A/H3N2) segment 7 (MP) 1781.3 0.000000e+00 973/978 (99%)
EPI353677 A/swine/Iowa/A01202770/2011 (A/H1N2) segment 7 (MP) 1775.8 0.000000e+00 972/978 (99%)
EPI312983 A/Pennsylvania/40/2010 (A/H3N2) segment 7 (MP) 1768.4 0.000000e+00 960/962 (99%)
EPI307932 A/swine/Pennsylvania/057108-1/2010 (A/H3N2) segment 7 (MP) 1768.4 0.000000e+00 971/978 (99%)
EPI281227 A/swine/Iowa/02096/2008 (A/H1N1) segment 7 (MP) 1768.4 0.000000e+00 971/978 (99%)
EPI291862 A/Pennsylvania/14/2010 (A/H3N2) segment 7 (MP) 1766.5 0.000000e+00 961/964 (99%)
EPI346496 A/Minnesota/19/2011 (A/H1N2) segment 7 (MP) 1761.0 0.000000e+00 960/964 (99%)
EPI289658 A/swine/Iowa/46519-4/2008 (A/H1N1) segment 7 (MP) 1759.1 0.000000e+00 969/978 (99%)
EPI337376 A/swine/Minnesota/001200/2006 (A/H1N1) segment 7 (MP) 1757.3 0.000000e+00 969/978 (99%)
EPI291827 A/Minnesota/03/2008 (A/H1N1) segment 7 (MP) 1757.3 0.000000e+00 969/978 (99%)
EPI337402 A/swine/Minnesota/02782/2009 (A/H3N2) segment 7 (MP) 1751.7 0.000000e+00 968/978 (98%)
EPI337350 A/swine/Minnesota/01146/2006 (A/H3N2) segment 7 (MP) 1751.7 0.000000e+00 968/978 (98%)
EPI291804 A/Iowa/05/2007 (A/H1N1) segment 7 (MP) 1746.2 0.000000e+00 965/975 (98%)
EPI337522 A/swine/Minnesota/001581/2007 (A/H1N1) segment 7 (MP) 1740.7 0.000000e+00 964/975 (98%)
EPI255757 A/swine/MN/23506/2009 (A/H1N1) segment 7 (MP) 1740.7 0.000000e+00 966/978 (98%)
EPI347611 A/Pennsylvania/14/2010 (A/H3N2) segment 7 (MP) 1737.0 0.000000e+00 945/948 (99%)
EPI219371 A/swine/Oklahoma/001142/2009 (A/H3N2) segment 7 (MP) 1735.1 0.000000e+00 965/978 (98%)
EPI219363 A/swine/Kansas/015252/2009 (A/H3N2) segment 7 (MP) 1735.1 0.000000e+00 965/978 (98%)
EPI347207 A/swine/Ohio/FAH2-1/2008 (A/H1N1) segment 7 (MP) 1733.3 0.000000e+00 964/977 (98%)
EPI338509 A/swine/Iowa/A01049762/2011 (A/H1N1) segment 7 (MP) 1729.6 0.000000e+00 964/978 (98%)
EPI337333 A/swine/Kentucky/SG1118/2003 (A/H0) segment 7 (MP) 1729.6 0.000000e+00 964/978 (98%)
EPI184451 A/swine/North Carolina/R08-001877-D08-013371/2008 (A/H3N2) segment 7 (MP) 1729.6 0.000000e+00 964/978 (98%)
EPI168648 A/turkey/Minnesota/366767/2005 (A/H3N2) segment 7 (MP) 1729.6 0.000000e+00 964/978 (98%)
EPI158877 A/turkey/MN/366767/2005 (A/H3N2) segment 7 (MP) 1729.6 0.000000e+00 964/978 (98%)
EPI338505 A/swine/Iillinois/A01049905/2011 (A/H1N1) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI338486 A/swine/Iowa/A01049630/2011 (A/H1N1) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI338485 A/swine/Iowa/A01049631/2011 (A/H1N1) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI337458 A/swine//Ohio/02026/2008 (A/H1N1) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI337442 A/swine/Minnesota/00611/2005 (A/H3N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI323267 A/swine/Minnesota/66853/2006 (A/H3N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI314332 A/turkey/BC/1529-3/2005 (A/H3N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI295330 A/swine/South Dakota/152B/2009 (A/H1N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI292295 A/swine/Minnesota/44837-3/2009 (A/H1N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI291820 A/Michigan/09/2007 (A/H1N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI291785 A/Illinois/09/2007 (A/H1N1) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI229373 A/turkey/OH/313053/2004 (A/H3N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI222685 A/swine/Oklahoma/011506/2007 (A/H3N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI220544 A/ferret/Iowa/15828/2008 (A/H1N1) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI155077 A/swine/Quebec/4001/2005 (A/H3N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI103196 A/swine/Ontario/33853/2005 (A/H3N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI103178 A/swine/Manitoba/12707/2005 (A/H3N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI103160 A/swine/British Columbia/28103/2005 (A/H3N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI103142 A/swine/Alberta/14722/2005 (A/H3N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI103124 A/Ontario/RV1273/2005 (A/H3N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI101391 A/turkey/Ohio/313053/04 (A/H3N2) segment 7 (MP) 1724.0 0.000000e+00 963/978 (98%)
EPI337546 A/swine/Minnesota/00484/2005 (A/H3N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI337530 A/swine/Minnesota/001332/2006 (A/H3N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI337514 A/swine/Minnesota/001444/2007 (A/H3N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI337394 A/swine/Illinois/02064/2008 (A/H1N1) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI337385 A/swine/Nebraska/00722/2005 (A/H0) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI337363 A/swine/Minnesota/00709/2005 (A/H3N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI323259 A/swine/Minnesota/578/2007 (A/H3N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI323258 A/swine/Minnesota/1300/2007 (A/H3N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI318071 A/swine/Iowa/A01049113/2010 (A/H3N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI317043 A/swine/Iowa/A01049112/2010 (A/H3N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI292292 A/swine/North Carolina/44837-2/2009 (A/H1N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI291904 A/Ohio/02/2007 (A/H1N1) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI291855 A/Ohio/01/2007 (A/H1N1) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI281235 A/swine/Ohio/02026/2008 (A/H1N1) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI281231 A/swine/Missouri/02060/2008 (A/H1N1) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI281230 A/swine/North Carolina/02023/2008 (A/H1N1) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI235274 A/swine/North Carolina/2003 (A/H3N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI228925 A/turkey/Illinois/2004 (A/H3N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI220886 A/swine/Oklahoma/020736-2/2008 (A/H1N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI220862 A/swine/Oklahoma/020734-2/2008 (A/H1N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)
EPI220854 A/swine/Oklahoma/016179-9/2008 (A/H1N2) segment 7 (MP) 1718.5 0.000000e+00 962/978 (98%)

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niman
PostPosted: Mon Apr 16, 2012 11:30 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 27328
Location: Pittsburgh, PA USA
EPI351688 A/swine/Indiana/A00968322/2010 (A/H3N2) segment 8 (NS) 1557.8 0.000000e+00 843/843 (100%)
EPI351682 A/swine/Indiana/A00968321/2010 (A/H3N2) segment 8 (NS) 1557.8 0.000000e+00 843/843 (100%)
EPI346495 A/Minnesota/19/2011 (A/H1N2) segment 8 (NS) 1557.8 0.000000e+00 843/843 (100%)
EPI335614 A/Pennsylvania/09/2011 (A/H3N2) segment 8 (NS) 1557.8 0.000000e+00 843/843 (100%)
EPI312978 A/Pennsylvania/40/2010 (A/H3N2) segment 8 (NS) 1557.8 0.000000e+00 843/843 (100%)
EPI293969 A/Minnesota/11/2010 (A/H3N2) segment 8 (NS) 1557.8 0.000000e+00 843/843 (100%)
EPI344399 A/Indiana/08/2011 (A/H3N2) segment 8 (NS) 1552.3 0.000000e+00 842/843 (99%)
EPI342599 A/swine/NY/A01104005/2011 (A/H3N2) segment 8 (NS) 1552.3 0.000000e+00 842/843 (99%)
EPI335633 A/Indiana/08/2011 (A/H3N2) segment 8 (NS) 1552.3 0.000000e+00 842/843 (99%)
EPI333147 A/Indiana/08/2011 (A/H3N2) segment 8 (NS) 1552.3 0.000000e+00 842/843 (99%)
EPI244304 A/Kansas/13/2009 (A/H3N2) segment 8 (NS) 1552.3 0.000000e+00 842/843 (99%)
EPI314794 A/swine/Minnesota/A01047613/2010 (A/H1N1) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%)
EPI291889 A/Wisconsin/12/2010 (A/H3N2) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%)
EPI346434 A/Iowa/08/2011 (A/H3N2) segment 8 (NS) 1546.8 0.000000e+00 841/843 (99%)
EPI346426 A/Iowa/07/2011 (A/H3N2) segment 8 (NS) 1546.8 0.000000e+00 841/843 (99%)
EPI346418 A/Iowa/09/2011 (A/H3N2) segment 8 (NS) 1546.8 0.000000e+00 841/843 (99%)
EPI342698 A/Iowa/09/2011 (A/H3N2) segment 8 (NS) 1546.8 0.000000e+00 841/843 (99%)
EPI342690 A/Iowa/08/2011 (A/H3N2) segment 8 (NS) 1546.8 0.000000e+00 841/843 (99%)
EPI335625 A/Pennsylvania/10/2011 (A/H3N2) segment 8 (NS) 1546.8 0.000000e+00 841/843 (99%)
EPI335622 A/Pennsylvania/11/2011 (A/H3N2) segment 8 (NS) 1546.8 0.000000e+00 841/843 (99%)
EPI302684 A/swine/Pennsylvania/62170-4/2010 (A/H3N2) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%)
EPI302681 A/swine/Pennsylvania/62170-3/2010 (A/H3N2) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%)
EPI302669 A/swine/Pennsylvania/62170-1/2010 (A/H3N2) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%)
EPI291861 A/Pennsylvania/14/2010 (A/H3N2) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%)
EPI291834 A/Minnesota/09/2010 (A/H3N2) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%)
EPI339165 A/Maine/06/2011 (A/H3N2) segment 8 (NS) 1541.2 0.000000e+00 840/843 (99%)
EPI291819 A/Michigan/09/2007 (A/H1N2) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%)
EPI351658 A/swine/Iowa/A01202640/2011 (A/H3N2) segment 8 (NS) 1535.7 0.000000e+00 839/843 (99%)
EPI344391 A/Indiana/10/2011 (A/H3N2) segment 8 (NS) 1535.7 0.000000e+00 839/843 (99%)
EPI344384 A/Indiana/10/2011 (A/H3N2) segment 8 (NS) 1535.7 0.000000e+00 839/843 (99%)
EPI340978 A/Indiana/10/2011 (A/H3N2) segment 8 (NS) 1535.7 0.000000e+00 839/843 (99%)
EPI366024 A/Utah/10/2012 (A/H3N2) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%)
EPI302672 A/swine/Pennsylvania/62170-2/2010 (A/H3N2) segment 8 (NS) 1532.0 0.000000e+00 836/839 (99%)
EPI346487 A/West Virginia/06/2011 (A/H3N2) segment 8 (NS) 1520.9 0.000000e+00 825/826 (99%)
EPI323271 A/swine/Minnesota/66960/2006 (A/H3N2) segment 8 (NS) 1508.0 0.000000e+00 834/843 (98%)
EPI342682 A/Iowa/07/2011 (A/H3N2) segment 8 (NS) 1506.1 0.000000e+00 819/821 (99%)
EPI347217 A/swine/Ohio/FAH1-1/2007 (A/H1N1) segment 8 (NS) 1491.4 0.000000e+00 831/843 (98%)
EPI173662 A/swine/OH/511445/2007 (A/H1N1) segment 8 (NS) 1491.4 0.000000e+00 831/843 (98%)
EPI337461 A/swine//Ohio/02026/2008 (A/H1N1) segment 8 (NS) 1485.8 0.000000e+00 830/843 (98%)
EPI281223 A/swine/Ohio/02026/2008 (A/H1N1) segment 8 (NS) 1485.8 0.000000e+00 830/843 (98%)
EPI291903 A/Ohio/02/2007 (A/H1N1) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%)
EPI291854 A/Ohio/01/2007 (A/H1N1) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%)
EPI229376 A/turkey/OH/313053/2004 (A/H3N2) segment 8 (NS) 1480.3 0.000000e+00 829/843 (98%)
EPI291784 A/Illinois/09/2007 (A/H1N1) segment 8 (NS) 1476.6 0.000000e+00 825/838 (98%)
EPI291950 A/swine/Iowa/H03UWF2/2003 (A/H1N1) segment 8 (NS) 1474.7 0.000000e+00 828/843 (98%)
EPI324022 A/swine/QC/1531-3/2009 (A/H1N1) segment 8 (NS) 1471.1 0.000000e+00 824/838 (98%)
EPI15030 A/SW/IN/14810-S/01 (A/H1N2) segment 8 (NS) 1471.1 0.000000e+00 824/838 (98%)
EPI15028 A/SW/IN/14810-T/01 (A/H1N2) segment 8 (NS) 1471.1 0.000000e+00 824/838 (98%)
EPI101397 A/turkey/Ohio/313053/04 (A/H3N2) segment 8 (NS) 1469.2 0.000000e+00 827/843 (98%)
EPI307933 A/swine/Pennsylvania/057108-1/2010 (A/H3N2) segment 8 (NS) 1465.5 0.000000e+00 824/839 (98%)
EPI291960 A/swine/Iowa/H03BF5/2003 (A/H3N2) segment 8 (NS) 1465.5 0.000000e+00 823/838 (98%)
EPI337445 A/swine/Minnesota/00611/2005 (A/H3N2) segment 8 (NS) 1463.7 0.000000e+00 826/843 (97%)
EPI337360 A/swine/Minnesota/SG1138/2002 (A/H1N1) segment 8 (NS) 1463.7 0.000000e+00 826/843 (97%)
EPI335025 A/swine/North Carolina/38448-1/2005 (A/H1N1) segment 8 (NS) 1463.7 0.000000e+00 826/843 (97%)
EPI281224 A/swine/Iowa/02039/2008 (A/H1N2) segment 8 (NS) 1463.7 0.000000e+00 826/843 (97%)
EPI235275 A/swine/North Carolina/2003 (A/H3N2) segment 8 (NS) 1463.7 0.000000e+00 826/843 (97%)
EPI228926 A/turkey/Illinois/2004 (A/H3N2) segment 8 (NS) 1463.7 0.000000e+00 826/843 (97%)
EPI227578 A/turkey/NC/353568/2005 (A/H3N2) segment 8 (NS) 1463.7 0.000000e+00 826/843 (97%)
EPI227561 A/swine/Oklahoma/D05-52884/2005 (A/H1N2) segment 8 (NS) 1463.7 0.000000e+00 826/843 (97%)
EPI98720 A/swine/MI/PU243/04 (A/H3N1) segment 8 (NS) 1463.7 0.000000e+00 826/843 (97%)
EPI25405 A/turkey/North Carolina/12344/03 (A/H3N2) segment 8 (NS) 1463.7 0.000000e+00 826/843 (97%)
EPI222648 A/swine/Minnesota/07002083/2007 (A/H1N1) segment 8 (NS) 1461.8 0.000000e+00 824/840 (98%)
EPI291952 A/swine/Iowa/H03LS4/2003 (A/H1N1) segment 8 (NS) 1460.0 0.000000e+00 822/838 (98%)
EPI222639 A/swine/Kansas/77778/2007 (A/H1N1) segment 8 (NS) 1460.0 0.000000e+00 821/836 (98%)
EPI182820 A/swine/Quebec/4001/2005 (A/H3N2) segment 8 (NS) 1460.0 0.000000e+00 822/838 (98%)
EPI164075 A/swine/Korea/CAS09/2006 (A/H3N2) segment 8 (NS) 1460.0 0.000000e+00 822/838 (98%)
EPI103189 A/swine/Ontario/33853/2005 (A/H3N2) segment 8 (NS) 1460.0 0.000000e+00 822/838 (98%)
EPI103171 A/swine/Manitoba/12707/2005 (A/H3N2) segment 8 (NS) 1460.0 0.000000e+00 822/838 (98%)
EPI103117 A/Ontario/RV1273/2005 (A/H3N2) segment 8 (NS) 1460.0 0.000000e+00 822/838 (98%)
EPI337389 A/swine/Nebraska/00722/2005 (A/H0) segment 8 (NS) 1458.1 0.000000e+00 825/843 (97%)
EPI337353 A/swine/Minnesota/01146/2006 (A/H3N2) segment 8 (NS) 1458.1 0.000000e+00 825/843 (97%)
EPI323204 A/swine/Minnesota/65767/2006 (A/H3N2) segment 8 (NS) 1458.1 0.000000e+00 825/843 (97%)
EPI314331 A/turkey/BC/1529-3/2005 (A/H3N2) segment 8 (NS) 1458.1 0.000000e+00 825/843 (97%)
EPI168654 A/turkey/North Carolina/353568/2005 (A/H3N2) segment 8 (NS) 1458.1 0.000000e+00 825/843 (97%)
EPI98736 A/swine/IN/PU542/04 (A/H3N1) segment 8 (NS) 1458.1 0.000000e+00 825/843 (97%)
EPI291963 A/swine/Iowa/H02NJ56371/2002 (A/H1N1) segment 8 (NS) 1454.4 0.000000e+00 821/838 (97%)
EPI164074 A/swine/Korea/CAS07/2005 (A/H3N2) segment 8 (NS) 1454.4 0.000000e+00 821/838 (97%)
EPI164073 A/swine/Korea/CAN04/2005 (A/H3N2) segment 8 (NS) 1454.4 0.000000e+00 821/838 (97%)
EPI164062 A/swine/Korea/CAS08/2005 (A/H1N1) segment 8 (NS) 1454.4 0.000000e+00 821/838 (97%)
EPI103207 A/turkey/Ontario/31232/2005 (A/H3N2) segment 8 (NS) 1454.4 0.000000e+00 821/838 (97%)
EPI103153 A/swine/British Columbia/28103/2005 (A/H3N2) segment 8 (NS) 1454.4 0.000000e+00 821/838 (97%)
EPI103135 A/swine/Alberta/14722/2005 (A/H3N2) segment 8 (NS) 1454.4 0.000000e+00 821/838 (97%)
EPI9401 A/Swine/Ohio/891/01 (A/H1N2) segment 8 (NS) 1454.4 0.000000e+00 821/838 (97%)
EPI337549 A/swine/Minnesota/00484/2005 (A/H3N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI337525 A/swine/Minnesota/001581/2007 (A/H1N1) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI337517 A/swine/Minnesota/001444/2007 (A/H3N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI337366 A/swine/Minnesota/00709/2005 (A/H3N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI337345 A/swine/Iowa/01700/2007 (A/H3N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI327283 A/swine/Texas/4199-2/1998 (A/H3N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI324168 A/SW/MB/5-5/2009 (A/H1N1) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI291958 A/swine/Iowa/H03G1/2003 (A/H1N1) segment 8 (NS) 1452.6 0.000000e+00 825/844 (97%)
EPI222678 A/swine/Oklahoma/008722/2007 (A/H3N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI222655 A/swine/Minnesota/1145/2007 (A/H3N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI220928 A/swine/Texas/050593/2008 (A/H1N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI220895 A/swine/Oklahoma/032726/2008 (A/H1N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI220855 A/swine/Oklahoma/016179-9/2008 (A/H1N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI220839 A/swine/Oklahoma/011521-5/2008 (A/H1N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI220831 A/swine/Oklahoma/011521-4/2008 (A/H1N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI220823 A/swine/Oklahoma/011289-9/2008 (A/H1N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)
EPI220815 A/swine/Oklahoma/011289-8/2008 (A/H1N2) segment 8 (NS) 1452.6 0.000000e+00 824/843 (97%)

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PostPosted: Mon Apr 16, 2012 11:58 am 
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niman wrote:
niman wrote:
niman wrote:
6 of the H3N2v swine sequences from 2011 or 2012 had an H1N1pdm09 M gene, but none had an H3 gene that matched the human cases from 2010-2012. Two of the 2010 sequences had an H3 match, but the MP sequences were from swine.

Only two of the H3 sequences (A/swine/Minnesota/A01076999/2010 and A/swine/Minnesota/A01134337/2010) matched, and as noted above, the M gene was swine.

All eight gene segments were released for A/swine/Minnesota/A01076999/2010, and the the PB1 had E618D.

The three A/swine/Minnesota/A01134337/2010 sequences were closely related to A/swine/Minnesota/A01076999/2010, suggesting that both sequences were closely related to human H3n2v sequences from 2010.

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PostPosted: Mon Apr 16, 2012 2:49 pm 
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Commentary

http://www.recombinomics.com/News/04161 ... S_NOT.html

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PostPosted: Sun Apr 22, 2012 6:30 am 
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H1 sequences released by USDA at Genbank

JQ809753 Swine 4 H1N2 USA 2010/12/07 1698 Influenza A virus (A/swine/Illinois/A01047525/2010(H1N2)) yes
JQ809790 Swine 6 H1N2 USA 2010/12/07 1410 Influenza A virus (A/swine/Illinois/A01047525/2010(H1N2)) yes
JQ809720 Swine 4 H1N1 USA 2010/12/02 1701 Influenza A virus (A/swine/Illinois/A01047530/2010(H1N1)) yes
JQ809757 Swine 6 H1N1 USA 2010/12/02 1410 Influenza A virus (A/swine/Illinois/A01047530/2010(H1N1)) yes
JQ809721 Swine 4 H1N1 USA 2010/12/16 1701 Influenza A virus (A/swine/Illinois/A01047738/2010(H1N1)) yes
JQ809758 Swine 6 H1N1 USA 2010/12/16 1410 Influenza A virus (A/swine/Illinois/A01047738/2010(H1N1)) yes
JQ809722 Swine 4 H1N1 USA 2010/12/16 1701 Influenza A virus (A/swine/Illinois/A01047741/2010(H1N1)) yes
JQ809759 Swine 6 H1N1 USA 2010/12/16 1410 Influenza A virus (A/swine/Illinois/A01047741/2010(H1N1)) yes
JQ809754 Swine 4 H1N2 USA 2011/12/22 1698 Influenza A virus (A/swine/Illinois/A01047779/2011(H1N2)) yes
JQ809791 Swine 6 H1N2 USA 2011/12/22 1410 Influenza A virus (A/swine/Illinois/A01047779/2011(H1N2)) yes
JQ809755 Swine 4 H1N2 USA 2011/01/03 1698 Influenza A virus (A/swine/Illinois/A01047805/2011(H1N2)) yes
JQ809792 Swine 6 H1N2 USA 2011/01/03 1410 Influenza A virus (A/swine/Illinois/A01047805/2011(H1N2)) yes
JQ809756 Swine 4 H1N2 USA 2011/01/03 1698 Influenza A virus (A/swine/Illinois/A01047806/2011(H1N2)) yes
JQ809793 Swine 6 H1N2 USA 2011/01/03 1410 Influenza A virus (A/swine/Illinois/A01047806/2011(H1N2)) yes
JQ809724 Swine 4 H1N1 USA 2011/01/12 1701 Influenza A virus (A/swine/Illinois/A01047930/2011(H1N1)) yes
JQ809761 Swine 6 H1N1 USA 2011/01/12 1410 Influenza A virus (A/swine/Illinois/A01047930/2011(H1N1)) yes
JQ809725 Swine 4 H1N1 USA 2011/01/17 1701 Influenza A virus (A/swine/Illinois/A01047984/2011(H1N1)) yes
JQ809762 Swine 6 H1N1 USA 2011/01/17 1410 Influenza A virus (A/swine/Illinois/A01047984/2011(H1N1)) yes
JQ809727 Swine 4 H1N1 USA 2010/02/21 1701 Influenza A virus (A/swine/Illinois/A01076194/2010(H1N1)) yes
JQ809764 Swine 6 H1N1 USA 2010/02/21 1410 Influenza A virus (A/swine/Illinois/A01076194/2010(H1N1)) yes
JQ809728 Swine 4 H1N1 USA 2010/04/11 1701 Influenza A virus (A/swine/Illinois/A01076203/2010(H1N1)) yes
JQ809765 Swine 6 H1N1 USA 2010/04/11 1410 Influenza A virus (A/swine/Illinois/A01076203/2010(H1N1)) yes
JQ809752 Swine 4 H1N2 USA 2010/09/27 1701 Influenza A virus (A/swine/Illinois/A01076365/2010(H1N2)) yes
JQ809789 Swine 6 H1N2 USA 2010/09/27 1410 Influenza A virus (A/swine/Illinois/A01076365/2010(H1N2)) yes
JQ809729 Swine 4 H1N1 USA 2010/11/01 1701 Influenza A virus (A/swine/Illinois/A01076907/2010(H1N1)) yes
JQ809766 Swine 6 H1N1 USA 2010/11/01 1410 Influenza A virus (A/swine/Illinois/A01076907/2010(H1N1)) yes
JQ809730 Swine 4 H1N1 USA 2011/01/26 1701 Influenza A virus (A/swine/Illinois/A01134201/2011(H1N1)) yes
JQ809767 Swine 6 H1N1 USA 2011/01/26 1410 Influenza A virus (A/swine/Illinois/A01134201/2011(H1N1)) yes
JQ809731 Swine 4 H1N1 USA 2011/01/31 1701 Influenza A virus (A/swine/Illinois/A01134216/2011(H1N1)) yes
JQ809768 Swine 6 H1N1 USA 2011/01/31 1410 Influenza A virus (A/swine/Illinois/A01134216/2011(H1N1)) yes
JQ809732 Swine 4 H1N1 USA 2011/02/08 1701 Influenza A virus (A/swine/Illinois/A01134373/2011(H1N1)) yes
JQ809769 Swine 6 H1N1 USA 2011/02/08 1410 Influenza A virus (A/swine/Illinois/A01134373/2011(H1N1)) yes
JQ809733 Swine 4 H1N1 USA 2011/03/10 1701 Influenza A virus (A/swine/Illinois/A01134707/2011(H1N1)) yes
JQ809770 Swine 6 H1N1 USA 2011/03/10 1410 Influenza A virus (A/swine/Illinois/A01134707/2011(H1N1)) yes
JQ809737 Swine 4 H1N1 USA 2010/07/11 1701 Influenza A virus (A/swine/Iowa/A01076215/2010(H1N1)) yes
JQ809774 Swine 6 H1N1 USA 2010/07/11 1410 Influenza A virus (A/swine/Iowa/A01076215/2010(H1N1)) yes
JQ809738 Swine 4 H1N1 USA 2010/08/01 1701 Influenza A virus (A/swine/Iowa/A01076217/2010(H1N1)) yes
JQ809775 Swine 6 H1N1 USA 2010/08/01 1410 Influenza A virus (A/swine/Iowa/A01076217/2010(H1N1)) yes
JQ809723 Swine 4 H1N1 USA 2011/03/29 1701 Influenza A virus (A/swine/Iowa/A01201152/2011(H1N1)) yes
JQ809760 Swine 6 H1N1 USA 2011/03/29 1410 Influenza A virus (A/swine/Iowa/A01201152/2011(H1N1)) yes
JQ809726 Swine 4 H1N1 USA 2011/01/06 1701 Influenza A virus (A/swine/Minnesota/A01047970/2011(H1N1)) yes
JQ809763 Swine 6 H1N1 USA 2011/01/06 1410 Influenza A virus (A/swine/Minnesota/A01047970/2011(H1N1)) yes
JQ809734 Swine 4 H1N1 USA 2010/04/25 1701 Influenza A virus (A/swine/Minnesota/A01076208/2010(H1N1)) yes
JQ809771 Swine 6 H1N1 USA 2010/04/25 1410 Influenza A virus (A/swine/Minnesota/A01076208/2010(H1N1)) yes
JQ809735 Swine 4 H1N1 USA 2011/08/30 1701 Influenza A virus (A/swine/Minnesota/A01116287/2011(H1N1)) yes
JQ809772 Swine 6 H1N1 USA 2011/08/30 1410 Influenza A virus (A/swine/Minnesota/A01116287/2011(H1N1)) yes
JQ809736 Swine 4 H1N1 USA 2011/09/07 1701 Influenza A virus (A/swine/Minnesota/A01116330/2011(H1N1)) yes
JQ809773 Swine 6 H1N1 USA 2011/09/07 1410 Influenza A virus (A/swine/Minnesota/A01116330/2011(H1N1)) yes
JQ809739 Swine 4 H1N1 USA 2011/11/01 1701 Influenza A virus (A/swine/Minnesota/A01116887/2011(H1N1)) yes
JQ809776 Swine 6 H1N1 USA 2011/11/01 1410 Influenza A virus (A/swine/Minnesota/A01116887/2011(H1N1)) yes
JQ809740 Swine 4 H1N1 USA 2010/11/15 1701 Influenza A virus (A/swine/Minnesota/A01134525/2010(H1N1)) yes
JQ809777 Swine 6 H1N1 USA 2010/11/15 1410 Influenza A virus (A/swine/Minnesota/A01134525/2010(H1N1)) yes
JQ809741 Swine 4 H1N1 USA 2011/02/22 1701 Influenza A virus (A/swine/Minnesota/A01134527/2011(H1N1)) yes
JQ809778 Swine 6 H1N1 USA 2011/02/22 1410 Influenza A virus (A/swine/Minnesota/A01134527/2011(H1N1)) yes
JQ809742 Swine 4 H1N1 USA 2010/11/23 1701 Influenza A virus (A/swine/Minnesota/A01134590/2010(H1N1)) yes
JQ809779 Swine 6 H1N1 USA 2010/11/23 1410 Influenza A virus (A/swine/Minnesota/A01134590/2010(H1N1)) yes
JQ809743 Swine 4 H1N1 USA 2010/11/23 1701 Influenza A virus (A/swine/Minnesota/A01134591/2010(H1N1)) yes
JQ809780 Swine 6 H1N1 USA 2010/11/23 1410 Influenza A virus (A/swine/Minnesota/A01134591/2010(H1N1)) yes
JQ809744 Swine 4 H1N1 USA 2011/02/23 1701 Influenza A virus (A/swine/Minnesota/A01134649/2011(H1N1)) yes
JQ809781 Swine 6 H1N1 USA 2011/02/23 1410 Influenza A virus (A/swine/Minnesota/A01134649/2011(H1N1)) yes
JQ809745 Swine 4 H1N1 USA 2011/03/18 1701 Influenza A virus (A/swine/Minnesota/A01134815/2011(H1N1)) yes
JQ809782 Swine 6 H1N1 USA 2011/03/18 1410 Influenza A virus (A/swine/Minnesota/A01134815/2011(H1N1)) yes
JQ809746 Swine 4 H1N1 USA 2011/03/18 1701 Influenza A virus (A/swine/Minnesota/A01134830/2011(H1N1)) yes
JQ809783 Swine 6 H1N1 USA 2011/03/18 1410 Influenza A virus (A/swine/Minnesota/A01134830/2011(H1N1)) yes
JQ809747 Swine 4 H1N1 USA 2010/02/07 1701 Influenza A virus (A/swine/Missouri/A01076190/2010(H1N1)) yes
JQ809784 Swine 6 H1N1 USA 2010/02/07 1410 Influenza A virus (A/swine/Missouri/A01076190/2010(H1N1)) yes
JQ809748 Swine 4 H1N1 USA 2010/03/21 1701 Influenza A virus (A/swine/North/Carolina/A01076201/2010(H1N1)) yes
JQ809785 Swine 6 H1N1 USA 2010/03/21 1410 Influenza A virus (A/swine/North/Carolina/A01076201/2010(H1N1)) yes
JQ809749 Swine 4 H1N1 USA 2010/06/27 1701 Influenza A virus (A/swine/North/Carolina/A01076213/2010(H1N1)) yes
JQ809786 Swine 6 H1N1 USA 2010/06/27 1410 Influenza A virus (A/swine/North/Carolina/A01076213/2010(H1N1)) yes
JQ809750 Swine 4 H1N1 USA 2011/03/24 1701 Influenza A virus (A/swine/Oklahoma/A01134906/2011(H1N1)) yes
JQ809787 Swine 6 H1N1 USA 2011/03/24 1410 Influenza A virus (A/swine/Oklahoma/A01134906/2011(H1N1)) yes
JQ809751 Swine 4 H1N1 USA 2011/05/09 1701 Influenza A virus (A/swine/South/Dakota/A01201469/2011(H1N1)) yes
JQ809788 Swine 6 H1N1 USA 2011/05/09 1410 Influenza A virus (A/swine/South/Dakota/A01201469/2011(H1N1)) yes

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niman
PostPosted: Thu Apr 26, 2012 4:42 am 
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More swine sequences released

JQ738152 Swine 1 H3N2 USA 2011/10/20 2280 Influenza A virus (A/swine/Illinois/A00857138a/2011(H3N2)) yes
JQ738153 Swine 2 H3N2 USA 2011/10/20 2274 Influenza A virus (A/swine/Illinois/A00857138a/2011(H3N2)) yes
JQ738154 Swine 3 H3N2 USA 2011/10/20 2151 Influenza A virus (A/swine/Illinois/A00857138a/2011(H3N2)) yes
JQ738155 Swine 4 H3N2 USA 2011/10/20 1701 Influenza A virus (A/swine/Illinois/A00857138a/2011(H3N2)) yes
JQ738156 Swine 5 H3N2 USA 2011/10/20 1497 Influenza A virus (A/swine/Illinois/A00857138a/2011(H3N2)) yes
JQ738157 Swine 6 H3N2 USA 2011/10/20 1410 Influenza A virus (A/swine/Illinois/A00857138a/2011(H3N2)) yes
JQ738158 Swine 7 H3N2 USA 2011/10/20 982 Influenza A virus (A/swine/Illinois/A00857138a/2011(H3N2)) yes
JQ738159 Swine 8 H3N2 USA 2011/10/20 838 Influenza A virus (A/swine/Illinois/A00857138a/2011(H3N2)) yes
JQ738160 Swine 1 H3N2 USA 2011/10/20 2280 Influenza A virus (A/swine/Illinois/A00857138b/2011(H3N2)) yes
JQ738161 Swine 2 H3N2 USA 2011/10/20 2274 Influenza A virus (A/swine/Illinois/A00857138b/2011(H3N2)) yes
JQ738162 Swine 3 H3N2 USA 2011/10/20 2151 Influenza A virus (A/swine/Illinois/A00857138b/2011(H3N2)) yes
JQ738163 Swine 4 H3N2 USA 2011/10/20 1701 Influenza A virus (A/swine/Illinois/A00857138b/2011(H3N2)) yes
JQ738164 Swine 5 H3N2 USA 2011/10/20 1497 Influenza A virus (A/swine/Illinois/A00857138b/2011(H3N2)) yes
JQ738165 Swine 6 H3N2 USA 2011/10/20 1410 Influenza A virus (A/swine/Illinois/A00857138b/2011(H3N2)) yes
JQ738166 Swine 7 H3N2 USA 2011/10/20 982 Influenza A virus (A/swine/Illinois/A00857138b/2011(H3N2)) yes
JQ738167 Swine 8 H3N2 USA 2011/10/20 838 Influenza A virus (A/swine/Illinois/A00857138b/2011(H3N2)) yes
JQ738144 Swine 1 H3N2 USA 2011/11/28 2280 Influenza A virus (A/swine/Illinois/A00857300/2011(H3N2)) yes
JQ738145 Swine 2 H3N2 USA 2011/11/28 2274 Influenza A virus (A/swine/Illinois/A00857300/2011(H3N2)) yes
JQ738146 Swine 3 H3N2 USA 2011/11/28 2151 Influenza A virus (A/swine/Illinois/A00857300/2011(H3N2)) yes
JQ738147 Swine 4 H3N2 USA 2011/11/28 1701 Influenza A virus (A/swine/Illinois/A00857300/2011(H3N2)) yes
JQ738148 Swine 5 H3N2 USA 2011/11/28 1497 Influenza A virus (A/swine/Illinois/A00857300/2011(H3N2)) yes
JQ738149 Swine 6 H3N2 USA 2011/11/28 1410 Influenza A virus (A/swine/Illinois/A00857300/2011(H3N2)) yes
JQ738150 Swine 7 H3N2 USA 2011/11/28 982 Influenza A virus (A/swine/Illinois/A00857300/2011(H3N2)) yes
JQ738151 Swine 8 H3N2 USA 2011/11/28 838 Influenza A virus (A/swine/Illinois/A00857300/2011(H3N2)) yes
JQ738168 Swine 1 H3N2 USA 2012/01/05 2280 Influenza A virus (A/swine/Illinois/A00857304a/2012(H3N2)) yes
JQ738169 Swine 2 H3N2 USA 2012/01/05 2274 Influenza A virus (A/swine/Illinois/A00857304a/2012(H3N2)) yes
JQ738170 Swine 3 H3N2 USA 2012/01/05 2151 Influenza A virus (A/swine/Illinois/A00857304a/2012(H3N2)) yes
JQ738171 Swine 4 H3N2 USA 2012/01/05 1701 Influenza A virus (A/swine/Illinois/A00857304a/2012(H3N2)) yes
JQ738172 Swine 5 H3N2 USA 2012/01/05 1497 Influenza A virus (A/swine/Illinois/A00857304a/2012(H3N2)) yes
JQ738173 Swine 6 H3N2 USA 2012/01/05 1410 Influenza A virus (A/swine/Illinois/A00857304a/2012(H3N2)) yes
JQ738174 Swine 7 H3N2 USA 2012/01/05 982 Influenza A virus (A/swine/Illinois/A00857304a/2012(H3N2)) yes
JQ738175 Swine 8 H3N2 USA 2012/01/05 838 Influenza A virus (A/swine/Illinois/A00857304a/2012(H3N2)) yes
JQ738176 Swine 1 H3N2 USA 2012/01/05 2280 Influenza A virus (A/swine/Illinois/A00857304b/2012(H3N2)) yes
JQ738177 Swine 2 H3N2 USA 2012/01/05 2274 Influenza A virus (A/swine/Illinois/A00857304b/2012(H3N2)) yes
JQ738178 Swine 3 H3N2 USA 2012/01/05 2151 Influenza A virus (A/swine/Illinois/A00857304b/2012(H3N2)) yes
JQ738179 Swine 4 H3N2 USA 2012/01/05 1701 Influenza A virus (A/swine/Illinois/A00857304b/2012(H3N2)) yes
JQ738180 Swine 5 H3N2 USA 2012/01/05 1497 Influenza A virus (A/swine/Illinois/A00857304b/2012(H3N2)) yes
JQ738181 Swine 6 H3N2 USA 2012/01/05 1410 Influenza A virus (A/swine/Illinois/A00857304b/2012(H3N2)) yes
JQ738182 Swine 7 H3N2 USA 2012/01/05 982 Influenza A virus (A/swine/Illinois/A00857304b/2012(H3N2)) yes
JQ738183 Swine 8 H3N2 USA 2012/01/05 838 Influenza A virus (A/swine/Illinois/A00857304b/2012(H3N2)) yes
JQ398772 Swine 4 H1N1 USA 2010/12/06 1701 Influenza A virus (A/swine/Iowa/A01049210/2010(H1N1)) yes
JQ398759 Swine 6 H1N1 USA 2010/12/06 1410 Influenza A virus (A/swine/Iowa/A01049210/2010(H1N1)) yes
JQ398748 Swine 7 H1N1 USA 2010/12/06 982 Influenza A virus (A/swine/Iowa/A01049210/2010(H1N1)) yes
JQ738184 Swine 1 H3N2 USA 2010/12/06 2280 Influenza A virus (A/swine/Iowa/A01049210/2010(H3N2)) yes
JQ738185 Swine 2 H3N2 USA 2010/12/06 2297 Influenza A virus (A/swine/Iowa/A01049210/2010(H3N2)) yes
JQ738186 Swine 3 H3N2 USA 2010/12/06 2151 Influenza A virus (A/swine/Iowa/A01049210/2010(H3N2)) yes
JQ738187 Swine 5 H3N2 USA 2010/12/06 1497 Influenza A virus (A/swine/Iowa/A01049210/2010(H3N2)) yes
JQ738188 Swine 8 H3N2 USA 2010/12/06 838 Influenza A virus (A/swine/Iowa/A01049210/2010(H3N2)) yes
CY086912 Swine 4 H1N1 USA 2010/09/08 1746 Influenza A virus (A/swine/Minnesota/226128/2010(H1N1)) yes
CY086915 Swine 7 H1N1 USA 2010/09/08 1002 Influenza A virus (A/swine/Minnesota/226128/2010(H1N1)) yes
CY086914 Swine 6 H1N1 USA 2010/09/08 1436 Influenza A virus (A/swine/Minnesota/226128/2010(H1N1)) yes
CY086916 Swine 8 H1N1 USA 2010/09/08 864 Influenza A virus (A/swine/Minnesota/226128/2010(H1N1)) yes
CY086913 Swine 5 H1N1 USA 2010/09/08 1520 Influenza A virus (A/swine/Minnesota/226128/2010(H1N1)) yes
CY086911 Swine 3 H1N1 USA 2010/09/08 2142 Influenza A virus (A/swine/Minnesota/226128/2010(H1N1))
CY086910 Swine 2 H1N1 USA 2010/09/08 1450 Influenza A virus (A/swine/Minnesota/226128/2010(H1N1))
CY086909 Swine 1 H1N1 USA 2010/09/08 1899 Influenza A virus (A/swine/Minnesota/226128/2010(H1N1))
JF312050 Swine 1 H1N2 USA 2010/12/07 2280 Influenza A virus (A/swine/Minnesota/A01047604/2010(H1N2)) yes
JF312051 Swine 2 H1N2 USA 2010/12/07 2274 Influenza A virus (A/swine/Minnesota/A01047604/2010(H1N2)) yes
JF312052 Swine 3 H1N2 USA 2010/12/07 2151 Influenza A virus (A/swine/Minnesota/A01047604/2010(H1N2)) yes
JF312053 Swine 4 H1N2 USA 2010/12/07 1748 Influenza A virus (A/swine/Minnesota/A01047604/2010(H1N2)) yes
JF312054 Swine 5 H1N2 USA 2010/12/07 1497 Influenza A virus (A/swine/Minnesota/A01047604/2010(H1N2)) yes
JF312055 Swine 6 H1N2 USA 2010/12/07 1410 Influenza A virus (A/swine/Minnesota/A01047604/2010(H1N2)) yes
JQ738189 Swine 7 H1N2 USA 2010/12/07 982 Influenza A virus (A/swine/Minnesota/A01047604/2010(H1N2)) yes
JF312056 Swine 8 H1N2 USA 2010/12/07 838 Influenza A virus (A/swine/Minnesota/A01047604/2010(H1N2)) yes
JF312057 Swine 1 H1N1 USA 2010/12/10 2280 Influenza A virus (A/swine/Minnesota/A01047613/2010(H1N1)) yes
JF312058 Swine 2 H1N1 USA 2010/12/10 2469 Influenza A virus (A/swine/Minnesota/A01047613/2010(H1N1)) yes
JF312059 Swine 3 H1N1 USA 2010/12/10 2151 Influenza A virus (A/swine/Minnesota/A01047613/2010(H1N1)) yes
JF312060 Swine 4 H1N1 USA 2010/12/10 1750 Influenza A virus (A/swine/Minnesota/A01047613/2010(H1N1)) yes
JF312061 Swine 5 H1N1 USA 2010/12/10 1497 Influenza A virus (A/swine/Minnesota/A01047613/2010(H1N1)) yes
JF312062 Swine 6 H1N1 USA 2010/12/10 1410 Influenza A virus (A/swine/Minnesota/A01047613/2010(H1N1)) yes
JQ738190 Swine 7 H1N1 USA 2010/12/10 982 Influenza A virus (A/swine/Minnesota/A01047613/2010(H1N1)) yes
JF312063 Swine 8 H1N1 USA 2010/12/10 838 Influenza A virus (A/swine/Minnesota/A01047613/2010(H1N1)) yes
JQ809748 Swine 4 H1N1 USA 2010/03/21 1701 Influenza A virus (A/swine/North Carolina/A01076201/2010(H1N1)) yes
JQ809785 Swine 6 H1N1 USA 2010/03/21 1410 Influenza A virus (A/swine/North Carolina/A01076201/2010(H1N1)) yes
JQ809749 Swine 4 H1N1 USA 2010/06/27 1701 Influenza A virus (A/swine/North Carolina/A01076213/2010(H1N1)) yes
JQ809786 Swine 6 H1N1 USA 2010/06/27 1410 Influenza A virus (A/swine/North Carolina/A01076213/2010(H1N1)) yes
JQ809751 Swine 4 H1N1 USA 2011/05/09 1701 Influenza A virus (A/swine/South Dakota/A01201469/2011(H1N1)) yes
JQ809788 Swine 6 H1N1 USA 2011/05/09 1410 Influenza A virus (A/swine/South Dakota/A01201469/2011(H1N1))

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gsgs
PostPosted: Thu Apr 26, 2012 5:23 am 
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Joined: Tue Sep 01, 2009 11:54 pm
Posts: 1775
Location: germany
perfect human match in 5 Illinois swines, full genomes


the 3 Illinois swine from 2011 match very well in all 8 segments to
A/IN/10/2011/10/22 , isolated 2 days later


the 2 Illinois swine from 2012/01/05 are reassorted 123568+47 or 12368+457

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