Rhiza Labs FluTracker Forum

A1581G

JN807991.1 Influenza A virus (A/eurasian sparrowhawk/Korea/Q94/2011(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 28.2 28.2 100% 1.7 100%
JN807989.1 Influenza A virus (A/eurasian eagle owl/Korea/Q133/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 28.2 28.2 100% 1.7 100%
JN613380.1 Influenza A virus (A/duck/Nepal/DTS24/2010(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 28.2 28.2 100% 1.7 100%

_________________
www.twitter.com/hniman

T1601C
JN807982.1 Influenza A virus (A/chicken/Korea/YS171/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 28.2 28.2 100% 1.7 100%
JN807999.1 Influenza A virus (A/wild bird/Korea/IS18/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 28.2 28.2 100% 1.7 100%
JN807991.1 Influenza A virus (A/eurasian sparrowhawk/Korea/Q94/2011(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 28.2 28.2 100% 1.7 100%
JN807984.1 Influenza A virus (A/duck/Korea/AS117/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 28.2 28.2 100% 1.7 100%
JN807998.1 Influenza A virus (A/whooper swan/Korea/Q28/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 28.2 28.2 100% 1.7 100%
JN807989.1 Influenza A virus (A/eurasian eagle owl/Korea/Q133/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 28.2 28.2 100% 1.7 100%
JN807987.1 Influenza A virus (A/duck/Korea/NJ83/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 28.2 28.2 100% 1.7 100%

_________________
www.twitter.com/hniman

A1653G

JN807976.1 Influenza A virus (A/baikal teal/Korea/Q524/2010(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807975.1 Influenza A virus (A/baikal teal/Korea/Q34/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807982.1 Influenza A virus (A/chicken/Korea/YS171/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807986.1 Influenza A virus (A/duck/Korea/IC360/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807990.1 Influenza A virus (A/eurasian eagle owl/Korea/Q196/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807973.1 Influenza A virus (A/eurasian eagle owl/Korea/Q178/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807981.1 Influenza A virus (A/chicken/Korea/SJ378/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807974.1 Influenza A virus (A/eurasian eagle owl/Korea/Q182/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807993.1 Influenza A virus (A/mandarin duck/Korea/Q525/2010(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807999.1 Influenza A virus (A/wild bird/Korea/IS18/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807988.1 Influenza A virus (A/duck/Korea/YA54/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807991.1 Influenza A virus (A/eurasian sparrowhawk/Korea/Q94/2011(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 24.3 24.3 100% 26 100%
JN807984.1 Influenza A virus (A/duck/Korea/AS117/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807978.1 Influenza A virus (A/chicken/Korea/IC546/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807985.1 Influenza A virus (A/duck/Korea/Cheonan/2010(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807977.1 Influenza A virus (A/chicken/Korea/Asan90/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807998.1 Influenza A virus (A/whooper swan/Korea/Q28/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807989.1 Influenza A virus (A/eurasian eagle owl/Korea/Q133/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807983.1 Influenza A virus (A/common Ketrel/Korea/Q197/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807987.1 Influenza A virus (A/duck/Korea/NJ83/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807995.1 Influenza A virus (A/quail/Korea/GC395/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807979.1 Influenza A virus (A/chicken/Korea/Iksan/2010(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
CY110854.1 Influenza A virus (A/common buzzard/Bulgaria/38WB/2010(H5N1)) hemagglutinin (HA) gene, partial cds 24.3 24.3 100% 26 100%
AB675741.1 Influenza A virus (A/chicken/Mie/1/2011(H5N1)) HA gene for hemagglutinin, complete cds 24.3 24.3 100% 26 100%
AB675740.1 Influenza A virus (A/chicken/Aichi/T1/2011(H5N1)) HA gene for haemagglutinin, complete cds 24.3 24.3 100% 26 100%
AB675739.1 Influenza A virus (A/chicken/Miyazaki/M6/2011(H5N1)) HA gene for haemagglutinin, complete cds 24.3 24.3 100% 26 100%
CY110738.1 Influenza A virus (A/whooper swan/Hamanaka/2011(H5N1)) hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
HQ020364.1 Influenza A virus (A/bar-headed goose/Qinghai/1/2010(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
AB677931.1 Influenza A virus (A/hooded crane/Kagoshima/4612J008/2010(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB677923.1 Influenza A virus (A/tundra swan/Tottori/12-002/2010(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB677915.1 Influenza A virus (A/peregrine falcon/Aichi/2302O017/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB677907.1 Influenza A virus (A/peregrine falcon/Kyoto/2602A009/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB677899.1 Influenza A virus (A/great drested grebe/Hyogo/2802E082/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB677891.1 Influenza A virus (A/mandarin duck/Kochi/3901C005/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB677883.1 Influenza A virus (A/owl/Tokushima/3602A023/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB677875.1 Influenza A virus (A/mandarin duck/Miyazaki/22M807-1/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB677867.1 Influenza A virus (A/mandarin duck/Nagasaki/4202A023/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB677859.1 Influenza A virus (A/mandarin duck/Oita/4402B056/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB677851.1 Influenza A virus (A/tufted duck/Yamaguchi/3502B007/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB677843.1 Influenza A virus (A/common pochard/Shimane/5502B024/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB676810.1 Influenza A virus (A/goshawk/Tochigi/64/2011(H5N1)) HA gene for haemagglutinin, complete cds 24.3 24.3 100% 26 100%
AB675544.1 Influenza A virus (A/tufted duck/Fukushima/7/2011(H5N1)) viral cRNA, segment 4, complete sequence
AB675503.1 Influenza A virus (A/tufted duck/Fukushima/4/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB675536.1 Influenza A virus (A/tufted duck/Fukushima/5/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
CY098291.1 Influenza A virus (A/herring gull/Mongolia/833T/2009(H5N1)) hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
AB612901.1 Influenza A virus (A/duck/Hokkaido/WZ83/2010(H5N1)) viral cRNA, segment 4, complete sequence
AB612909.1 Influenza A virus (A/duck/Hokkaido/WZ101/2010(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
HQ695910.1 Influenza A virus (A/mallard/Korea/1195/2010(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN202558.1 Influenza A virus (A/Mallard duck/Korea/W401/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
AB629713.1 Influenza A virus (A/peregrine falcon/Aomori/7/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB629700.1 Influenza A virus (A/tundra swan/Fukushima/207/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB629698.1 Influenza A virus (A/tufted duck/Fukushima/16/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB620022.1 Influenza A virus (A/whooper swan/Hokkaido/3/2011(H5N1)) viral cRNA, segment 4, complete sequence
AB621345.1 Influenza A virus (A/pintail/Hokkaido/1/2011(H5N1)) viral cRNA, segment 4, complete sequence
AB621347.1 Influenza A virus (A/whooper swan/Hokkaido/6/2011(H5N1)) viral cRNA, segment 4, complete sequence
AB621349.1 Influenza A virus (A/greater scaup/Hokkaido/2/2011(H5N1)) viral cRNA, segment 4, complete sequence
AB610972.2 Influenza A virus (A/whooper swan/Hokkaido/4/2011(H5N1)) viral cRNA, segment 4, complete sequence
AB629702.1 Influenza A virus (A/greater scaup/Hokkaido/28/2011(H5N1)) viral cRNA, segment 4, complete sequence
AB629704.1 Influenza A virus (A/whooper swan/Hokkaido/13-27/2011(H5N1)) viral cRNA, segment 4, complete sequence
AB629706.1 Influenza A virus (A/whooper swan/Hokkaido/A13/2011(H5N1)) viral cRNA, segment 4, complete sequence
AB629708.1 Influenza A virus (A/whooper swan/Hokkaido/13-21/2011(H5N1)) viral cRNA, segment 4, complete sequence
AB675568.1 Influenza A virus (A/whooper swan/Hokkaido/3/2011(H5N1)) viral cRNA, segment 4, complete sequence
AB675576.1 Influenza A virus (A/whooper swan/Hokkaido/6/2011(H5N1)) viral cRNA, segment 4, complete sequence
AB675558.1 Influenza A virus (A/pintail/Hokkaido/1/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
JF699675.1 Influenza A virus (A/mandarin duck/Korea/K10-515/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JF699674.1 Influenza A virus (A/mandarin duck/Korea/K10-485/2010(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JF699673.1 Influenza A virus (A/mandarin duck/Korea/K10-483/2010(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds
JN202559.1 Influenza A virus (A/Mallard duck/Korea/W404/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds
JN807980.1 Influenza A virus (A/chicken/Korea/PT412/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds
JN807994.1 Influenza A virus (A/pheasant/Korea/PT411/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds
JN807996.1 Influenza A virus (A/turkey/Korea/DDC518/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JF699672.1 Influenza A virus (A/mandarin duck/Korea/K10-480/2010(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
AB617579.1 Influenza A virus (A/peregrine falcon/Tochigi/15/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB615237.1 Influenza A virus (A/tufted duck/Fukushima/2/2011(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
HM006747.1 Influenza A virus (A/whooper swan/Mongolia/9/2009(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 24.3 24.3 100% 26 100%
HM006746.1 Influenza A virus (A/whooper swan/Mongolia/8/2009(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 24.3 24.3 100% 26 100%
HM006745.1 Influenza A virus (A/whooper swan/Mongolia/7/2009(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 24.3 24.3 100% 26 100%
HM006743.1 Influenza A virus (A/whooper swan/Mongolia/6/2009(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 24.3 24.3 100% 26 100%
HM006742.1 Influenza A virus (A/whooper swan/Mongolia/5/2009(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 24.3 24.3 100% 26 100%
HM006741.1 Influenza A virus (A/whooper swan/Mongolia/4/2009(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 24.3 24.3 100% 26 100%
HM006740.1 Influenza A virus (A/whooper swan/Mongolia/2/2009(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 24.3 24.3 100% 26 100%
HM006738.1 Influenza A virus (A/whooper swan/Mongolia/1/2009(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 24.3 24.3 100% 26 100%
HQ131674.1 Influenza A virus (A/great crested grebe/Tyva/22/2010(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
HM172079.1 Influenza A virus (A/chicken/Guizhou/7/2008(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
AB569609.1 Influenza A virus (A/whooper swan/Mongolia/21/2010(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB569607.1 Influenza A virus (A/whooper swan/Mongolia/11/2010(H5N1)) viral cRNA, segment 4, complete sequence 24.3 24.3 100% 26 100%
AB520708.1 Influenza A virus (A/whooper swan/Mongolia/6/2009(H5N1)) HA gene for haemagglutinin, complete cds 24.3 24.3 100% 26 100%
AB517667.1 Influenza A virus (A/whooper swan/Mongolia/8/2009(H5N1)) HA gene for haemagglutinin, complete cds 24.3 24.3 100% 26 100%
AB517665.1 Influenza A virus (A/whooper swan/Mongolia/2/2009(H5N1)) HA gene for haemagglutinin, complete cds 24.3 24.3 100% 26 100%
GQ386142.1 Influenza A virus (A/grebe/Tyva/3/2009(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%

_________________
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C1670G

JN807975.1 Influenza A virus (A/baikal teal/Korea/Q34/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807990.1 Influenza A virus (A/eurasian eagle owl/Korea/Q196/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%
JN807991.1 Influenza A virus (A/eurasian sparrowhawk/Korea/Q94/2011(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 24.3 24.3 100% 26 100%
JN807989.1 Influenza A virus (A/eurasian eagle owl/Korea/Q133/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 24.3 24.3 100% 26 100%

_________________
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T1640A T1643A T1656C C1670G

JN807991.1 Influenza A virus (A/eurasian sparrowhawk/Korea/Q94/2011(H5N1)) segment 4 hemagglutinin (HA) gene, partial cds 61.9 61.9 100% 9e-10 100%
JN807989.1 Influenza A virus (A/eurasian eagle owl/Korea/Q133/2011(H5N1)) segment 4 hemagglutinin (HA) gene, complete cds 61.9 61.9 100% 9e-10 100%

_________________
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Query 1381 AAGAACCTTTACGATAAGGTCAGAGTACAGCCTAAGGATAACGGAAAAGATTTGGGGAAC 1440
JN807989 1381 ............................................................ 1440
JN807991 1381 ...........................................C......G.....T... 1440
JN807976 1381 ........................C......T.........T.C......G.....T... 1440
JN807990 1381 ........................C......T.........T.C......G.....T... 1440
JN807984 1381 ........................C......T.........T.C......G.....T... 1440
JN807998 1381 ........................C......T.........T.C......G.....T... 1440
AB612901 1395 ........................C......T.........T.C......G.....T... 1454
JN807985 1381 ........................C......T.........T.C......G.....T... 1440
JN807977 1381 ........................C......T.........T.C............T... 1440
JN807987 1381 ........................C...T..T.........T.C.G....G.....T... 1440
AB677923 1395 ........................C......T.........T.C......G.....T... 1454
AB677891 1395 ........................C......T.........T.C......G.....T... 1454
AB676810 1395 ........................C......T.........T.C......G.....T... 1454
JF699675 1381 ........................C......T.........T.C......G.....T... 1440
JF699674 1381 ........................C......T.........T.C......G.....T... 1440
JF699673 1381 ........................C......T.........T.C......G.....T... 1440
AB675739 1381 ........................C......T.........T.C......G.....T... 1440
AB677859 1395 ........................C......T.........T.C......G.....T... 1454
JN807973 1381 ........................C....A.T.........T.C......G.....T... 1440
JN807981 1381 ........................C......T.........T.C......G.....T... 1440
JN807993 1381 ........................C......T.........T.C......G.....T... 1440
JN807979 1381 ........................C......T.........T.C......G.....T... 1440
AB675741 1381 ........................C......T.........T.C......G.....T... 1440
AB677915 1395 ........................C......T.........T.C......G.....T... 1454
HQ695910 1381 ........................C......T.........T.C......G.....T... 1440
JN202558 1381 ........................C......T.........T.C......G.....T... 1440
AB617579 1395 ........................C......T.........T.C......G.....T... 1454
AB569609 1395 ........................C......T.........T.C......G.....T... 1454
JN807986 1381 ........................C......T.........T.C............T... 1440
JN807999 1381 ........................C......T.........T.C......G.....T... 1440
JN807983 1381 ........................C......T.........T.C......G.....T... 1440
JN807995 1381 ........C...............C......T.........T.C......G.....T... 1440
AB677931 1395 ........................C......T.........T.C......G.....T... 1454
AB677875 1395 ........................C......T.........T.C......G.....T... 1454
AB677867 1395 ........................C......T.........T.C......G.....T... 1454
JF699672 1381 ........................C......T.........T.C......G.....T... 1440
JN807975 1381 ...............................T.........T.C......G.....T... 1440
AB675544 1395 ........................C......T.........T.C......G.....T... 1454
AB675536 1395 ........................C......T.........T.C......G.....T... 1454
AB629713 1395 ........................C......T.........T.C......G.....T... 1454
AB520708 1381 ........................C......T.........T.C......G.....T... 1440
AB517667 1395 ........................C......T.........T.C......G.....T... 1454
AB517665 1395 ........................C......T.........T.C......G.....T... 1454
JN807974 1381 ........................C......T.........T.C......G.....T... 1440
JN807988 1381 ........................C......T.........T.C......G.....T... 1440
AB677883 1395 ........................C......T.........T.C......G.....T... 1454
CY098291 1395 ........................C......T.........T.C......G.....T... 1454
GQ386142 1397 ........................C......T.........T.C......G.....T... 1456
JN807992 1381 ........................C......T.........T.C......G.....T... 1440
AB677851 1395 ........................C......T.........T.C......G.....T... 1454
AB629700 1395 ........................C......T.........T.C......G.....T... 1454
AB629698 1395 ........................C......T.........T.C......G.....T... 1454
AB615237 1395 ........................C......T.........T.CG.....G.....T... 1454
AB523767 1395 ........................C......T.........T.C......G.....T... 1454
AB523759 1395 ........................C......T.........T.C......G.....T... 1454
AB523366 1395 ........................C......T.........T.C......G.....T... 1454
AB521999 1395 ........................C......T.........T.C......G.....T... 1454
AB675740 1381 ........................C......T.........T.C......G.....T... 1440
CY110738 1381 ........................C......T.........T.C......G.....T... 1440
AB620022 1395 ........................C......T.........T.C......G.....T... 1454
AB523368 1395 ........................C......T.........T.C......G.....T... 1454
AB522001 1395 ........................C......T.........T.C......G.....T... 1454
GQ386150 1397 ........................C......T.........T.C......G.....T... 1456
JN807982 1381 ........................C......T.........T.C......G.....T... 1440
AB677843 1395 ........................C......T.........T.C......G.....T... 1454
HQ131674 1424 ........................C......T.........T.C......G.....T... 1483
CY063318 1409 ........................C......T.........T.C......G.....T... 1468
AB523775 1395 ........................C......T.........T.C......G.....T... 1454
HQ020375 1414 ........................C......T.........T.C......G.....T... 1473
HQ020367 1407 ........................C......T.........T.C......G.....T... 1466
AB677907 1395 ........................C......T.........T.C......G.....T... 1454
AB677899 1395 ........................C......T.........T.C......G.....T... 1454
JN613389 1381 ........................C......T.........T.C......G.....T... 1440
AB569607 1395 ........................C......T.........T.C......G.....T... 1454
JN613385 1381 ........................C......T.........T.C......G.....T... 1440
HM006730 1373 ........................C......T.........T.C......G.....T... 1432
JN613386 1381 ........................C......T.........T.C......G.....T... 1440
HQ020371 1412 ........................C......T.........T.C......G.....T... 1471
HQ020369 1417 ........................C......T.........T.C......G.....T... 1476
HM006745 1366 ........................C......T.........T.C......G.....T... 1425
HM006742 1370 ........................C......T.........T.C......G.....T... 1429
HQ020374 1423 ........................C......T.........T.C......G.....T... 1482
HQ020372 1417 ........................C......T.........T.C......G.....T... 1476
HQ020370 1414 ........................C......T.........T.C......G.....T... 1473
HQ020364 1455 ........................C......T.........T.C......G.....T... 1514
HM006733 1374 ........................C......T.........T.C......G.....T... 1433
JN543373 1394 ........................C......T.........T.C......GC....T... 1453
GQ338087 1397 ........................C......T.........T.C......G.....T..T 1456
JN807978 1381 ........................C......T.........T.C......G.....T... 1440
HQ020368 1414 ........................C......T.........T.C......G.....T... 1473
JN613388 1381 ........................C......T.........T.C......G.....T... 1440
JN613380 1381 ........................C......T.........T.C......G.....T... 1440
JN613390 1381 ........................C......T.........T.C......G.....T... 1440
JN613384 1381 ........................C......T.........T.C......G.....T... 1440
JN613383 1381 ........................C......T.........T.C......G.....T... 1440
CY098352 1381 ........................C......T......C..T.C......GC....T... 1440
CY098344 1381 ........................C......T......C..T.C......GC....T... 1440
CY098337 1381 ........................C......T......C..T.C......GC....T... 1440
GQ338084 1397 ........................C......T.........T.C......G.....T..T 1456
HM006735 1360 ........................C......T.........T.C......G.....T... 1419

_________________
www.twitter.com/hniman

Query 1441 GGATGTGTGGAGTTCTCTCACAAATGTAATAATGAAACTTTCCAAAGTGTAGGAAACGCA 1500
JN807989 1441 ............................................................ 1500
JN807991 1441 .....................................G.A.GG................. 1500
JN807976 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN807990 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN807984 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN807998 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB612901 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
JN807985 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN807977 1441 ..T...T.C.......A...................TG.A.GG................. 1500
JN807987 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB677923 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB677891 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB676810 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
JF699675 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JF699674 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JF699673 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB675739 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB677859 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
JN807973 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN807981 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN807993 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN807979 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB675741 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB677915 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
HQ695910 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN202558 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB617579 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB569609 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
JN807986 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN807999 1441 ..T...T.C.......A...................TG.A.GG........A........ 1500
JN807983 1441 ..T...T.C.......A...................TG.A.GG........A....T.G. 1500
JN807995 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB677931 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB677875 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB677867 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
JF699672 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN807975 1441 ..T...T.C...........................TG.A.GG.............A... 1500
AB675544 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB675536 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB629713 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB520708 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB517667 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB517665 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
JN807974 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN807988 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB677883 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
CY098291 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
GQ386142 1457 ..T...T.C.......A...................TG.A.GG........A......G. 1516
JN807992 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB677851 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB629700 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB629698 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB615237 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB523767 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB523759 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB523366 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB521999 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB675740 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
CY110738 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB620022 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB523368 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB522001 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
GQ386150 1457 ..T...T.C.......A...................TG.A.GG........A......G. 1516
JN807982 1441 ......T.C.......A...................TG.A.GG........A......G. 1500
AB677843 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
HQ131674 1484 ..T...T.C.......A...................TG.A.GG........A......G. 1543
CY063318 1469 ..T...T.C.......A...................TG.A.GG........A......G. 1528
AB523775 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
HQ020375 1474 ..T...T.C.......A...................TG.A.GG........A......G. 1533
HQ020367 1467 ..T...T.C.......A...................TG.A.GG........A......G. 1526
AB677907 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
AB677899 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
JN613389 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
AB569607 1455 ..T...T.C.......A...................TG.A.GG........A......G. 1514
JN613385 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
HM006730 1433 ..T...T.C.......A...................TG.A.GG........A......G. 1492
JN613386 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
HQ020371 1472 ..T...T.C.......A...................TG.A.GG........A......G. 1531
HQ020369 1477 ..T...T.C.......A...................TG.A.GG........A......G. 1536
HM006745 1426 ..T...T.C.......A...................TG.A.GG........A......G. 1485
HM006742 1430 ..T...T.C.......A...................TG.A.GG........A......G. 1489
HQ020374 1483 ..T...T.C.......A...................TG.A.GG........A......G. 1542
HQ020372 1477 ..T...T.C.......A...................TG.A.GG........A......G. 1536
HQ020370 1474 ..T...T.C.......A...................TG.A.GG........A......G. 1533
HQ020364 1515 ..T...T.C.......A...................TG.A.GG........A......G. 1574
HM006733 1434 ..T...T.C.......A...................TG.A.GG........A......G. 1493
JN543373 1454 ..T...T.C.......A...................TG.A.GG........A......G. 1513
GQ338087 1457 ..T...T.C.......A...................TG.A.GG........A......G. 1516
JN807978 1441 ..T...T.C.......A..........C........TG.A.GG........A......G. 1500
HQ020368 1474 ..T...T.C.......A...................TG.A.GG........A......G. 1533
JN613388 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN613380 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN613390 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN613384 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
JN613383 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
CY098352 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
CY098344 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
CY098337 1441 ..T...T.C.......A...................TG.A.GG........A......G. 1500
GQ338084 1457 ..T...T.C.......A...................TG.A.GG........A......G. 1516
HM006735 1420 ..T...T.C.......A...................TG.A.GG........A......G. 1479

_________________
www.twitter.com/hniman

Query 1621 TCTCTAGGGCGGACAATCAAGAAGGCTGGTCTGTCCTTATGGATGTGTTGCAACGGATCG 1680
JN807989 1621 ............................................................ 1680
JN807991 1621 ..C.........G............................................... 1680
JN807976 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JN807990 1621 ..C....T..T.G......T..T............T........................ 1680
JN807984 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JN807998 1621 ..C....T..T.G......T..T............T.............C.......... 1680
AB612901 1635 ..C....T..T.G......T..T............T.............C.......... 1694
JN807985 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JN807977 1621 ..C....TA.T.G.........T............T.............C.......... 1680
JN807987 1621 ..C....T....G.........T..........................C.......... 1680
AB677923 1635 ..C....T..TAG......T..T............T.............C.......... 1694
AB677891 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB676810 1635 ..C....T..T.G......T..T............T.............C.......... 1694
JF699675 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JF699674 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JF699673 1621 ..C....T..T.G......T..T............T.............C.......... 1680
AB675739 1621 ..C....T..T.G......T..T............T.............C.......... 1680
AB677859 1635 ..C....T..T.G......T..T............T.............C.......... 1694
JN807973 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JN807981 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JN807993 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JN807979 1621 ..C....T..T.G......T..T............T..C..........C.......... 1680
AB675741 1621 ..C....T..T.G......T..T............T.............C.......... 1680
AB677915 1635 ..C....T..T.G......T..T............T.............C.......... 1694
HQ695910 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JN202558 1621 ..C....T..T.G......T..T............T.............C.......... 1680
AB617579 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB569609 1635 ..C....T..T.G......T..T............T.............C.......... 1694
JN807986 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JN807999 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JN807983 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JN807995 1621 ..C....T..T.G......T..T............T.............C.......... 1680
AB677931 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB677875 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB677867 1635 ..C....T..T.G......T..T............T.............C.......... 1694
JF699672 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JN807975 1621 ..C....T..T.G......T.GT............T........................ 1680
AB675544 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB675536 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB629713 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB520708 1621 ..C....T..T.G......T..T............T.............C......G... 1680
AB517667 1635 ..C....T..T.G......T..T............T.............C......G... 1694
AB517665 1635 ..C....T..T.G......T..T............T.............C......G... 1694
JN807974 1621 ..C....T..T.G......T..T............T.............C.......... 1680
JN807988 1621 ..C....T..T.G......T..T............T.............C.......... 1680
AB677883 1635 ..C....T..T.G......T..T............T.............C.......... 1694
CY098291 1635 ..C....T..T.G......T..T............T.............C......G... 1694
GQ386142 1637 ..C....T..T.G......T..T............T.............C......G... 1696
JN807992 1621 ..C....T..T.G......T..T.........A..T.............C.......... 1680
AB677851 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB629700 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB629698 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB615237 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB523767 1635 ..C....T..T.G......T..T.........A..T.............C......G... 1694
AB523759 1635 ..C....T..T.G......T..T.........A..T.............C......G... 1694
AB523366 1635 ..C....T..T.G......T..T.........A..T.............C......G... 1694
AB521999 1635 ..C....T..T.G......T..T.........A..T.............C......G... 1694
AB675740 1621 ..C....T..T.G......T..T............T.............C.......... 1680
CY110738 1621 ..C....T..T.G......T..T............T.............C.......... 1680
AB620022 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB523368 1635 ..C....T..T.G......T..T.........A..T.............C......G... 1694
AB522001 1635 ..C....T..T.G......T..T.........A..T.............C......G... 1694
GQ386150 1637 ..C....T..T.G......T..T.........A..T.............C......G... 1696
JN807982 1621 ..C...CT.GT........T..T............TC.C..............T.....C 1680
AB677843 1635 ..C....T..T.G......T..T............T.............C.......... 1694
HQ131674 1664 ..C....T..T.G......T..T............T.............C......G... 1723
CY063318 1649 ..C....T..T.G......T..T.........A..T.............C......G... 1708
AB523775 1635 ..C....T..T.G......T..T.........A..T.............C......G... 1694
HQ020375 1654 ..C....T..T.G......T..T.........A..T.............C......G... 1713
HQ020367 1647 ..C....T..T.G......T..T.........A..T.............C......G... 1706
AB677907 1635 ..C....T..T.G......T..T............T.............C.......... 1694
AB677899 1635 ..C....T..T.G......T..T............T.............C.......... 1694
JN613389 1621 ..C....T..T.G......T..T.........A..T.............C......G... 1680
AB569607 1635 ..C....T..T.G......T..T............T.............C......G... 1694
JN613385 1621 ..C....T..T.G......T..T.........A..T.............C......G... 1680
HM006730 1613 ..C....T..T.G......T..T.........A..T.............C......G... 1672
JN613386 1621 ..C....T..T.G......T..T.........A..T.............C......G... 1680
HQ020371 1652 ..C....T..T.G......T..T.........A..T.............C......G... 1711
HQ020369 1657 ..C....T..T.G......T..T.........A..T.............C......G... 1716
HM006745 1606 ..C....T..T.G......T..T............T.............C......G... 1665
HM006742 1610 ..C....T..T.G......T..T............T.............C......G... 1669
HQ020374 1663 ..C....T..T.G......T..T.........A..T.............C......G... 1722
HQ020372 1657 ..C....T..T.G......T..T.........A..T.............C......G... 1716
HQ020370 1654 ..C....T..T.G......T..T.........A..T.............C......G... 1713
HQ020364 1695 ..C....T..T.G......T..T............T.............C......G... 1754
HM006733 1614 ..C....T..T.G......T..T.........A..T.............C......G... 1673
JN543373 1634 ..C....T..T.G......T..T.........A..T.............C......G... 1693
GQ338087 1637 ..C....T..T.G......T..T.........A..T.............C......G... 1696
JN807978 1621 ..C....T..T.G......T..T............T.......A.....C.......... 1680
HQ020368 1654 ..C....T..T.G......T..T.........A..T.............C......G... 1713
JN613388 1621 ..C....T..T.G......T..T.........A..T..G..........C......G... 1680
JN613380 1621 ..C....T..T.G......T..T.........A..T..G..........C......G... 1680
JN613390 1621 ..C....T..T.G......T..T.........A..T..G..........C......G... 1680
JN613384 1621 ..C....T..T.G......T..T.........A..T..G..........C......G... 1680
JN613383 1621 ..C....T..T.G......T..T.........A..T..G..........C......G... 1680
CY098352 1621 ..C....T..T.G......T..T.........A..T.............C......G... 1680
CY098344 1621 ..C....T..T.G......T..T.........A..T.............C......G... 1680
CY098337 1621 ..C....T..T.G......T..T.........A..T.............C......G... 1680
GQ338084 1637 ..C....T..T.G......T..T.........A..T.............C......G... 1696
HM006735 1600 ..C....T..T.G......T..T.........A..T.............C......G... 1659

_________________
www.twitter.com/hniman

The above data demonstrates that the four newly acquire polymorphisms list above are shared by the above wild bird (sparrowhawk and eage owl) sequences, which can also be seen in various BLAST results, which provide multipe examples of consecutive newly acquired polymorphisms shared by the above two isolates, which are interupted by additional clusters found only in the eargle owl sequence (JN807989 ) signaling multiple recombination events.

_________________
www.twitter.com/hniman

The travel logs (polymorphism pedigrees) identify sources of the acquire polymorphisms. However, the number of wild bird H5 low path sequences are limited, so not all sequences trace back to the original (donor) sources.

In many instances the polymorphisms are shared among the recently released clade 2.3.2 sequences in Korea, providing additional evidence of multiple recombination events between closely related sequences, which is common. Like the longer stretches of newly acquired sequences, sources outside of recent H5N1 clade 2.3.2 sequences are not found in the Genbank or GISAID databases.

_________________
www.twitter.com/hniman