Rhiza Labs FluTracker Forum

Mexico 2012 H1N1pdm09 sequences at Genbank

CY110743 Human 4 H1N1 Mexico 2012/01/26 1745 Influenza A virus (A/Mexico/InDRE1474/2012(H1N1)) yes
CY110744 Human 6 H1N1 Mexico 2012/01/26 1438 Influenza A virus (A/Mexico/InDRE1474/2012(H1N1)) yes
CY110745 Human 4 H1N1 Mexico 2012/01/19 1745 Influenza A virus (A/Mexico/InDRE689/2012(H1N1)) yes
CY110746 Human 6 H1N1 Mexico 2012/01/19 1094 Influenza A virus (A/Mexico/InDRE689/2012(H1N1))

_________________
www.twitter.com/hniman

LOCUS CY110743 1745 bp cRNA linear VRL 17-FEB-2012
DEFINITION Influenza A virus (A/Mexico/InDRE1474/2012(H1N1)) hemagglutinin
(HA) gene, complete cds.
ACCESSION CY110743
VERSION CY110743.1 GI:376319285
DBLINK BioProject: PRJNA37813
KEYWORDS .
SOURCE Influenza A virus (A/Mexico/InDRE1474/2012(H1N1))
ORGANISM Influenza A virus (A/Mexico/InDRE1474/2012(H1N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 1745)
AUTHORS Ramirez-Gonzalez,J.E., Alcantara-Perez,P.A.,
Rodriguez-Maldonado,Ap., Rodriguez-Reyes,B.D., Wong-Arambula,C.E.,
Del Mazo-Lopez,J.C., Cortes-Ortiz,I., Barrera-Badillo,G.,
Lopez-Martinez,I. and Alpuche-Aranda,C.
TITLE Genetic characterization of pandemic Influenza H1N1 virus in Mexico
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1745)
AUTHORS Alcantara-Perez,P.A., Rodriguez-Maldonado,A.P.,
Rodriguez-Reyes,B.D., Wong-Arambula,C.E., Del Mazo-lopez,J.C.,
Cortes-Ortiz,I., Barrera-Badillo,G., Lopez-Martinez,I.,
Alpuche-Aranda,C. and Ramirez-Gonzalez,J.E.
TITLE Direct Submission
JOURNAL Submitted (17-FEB-2012) Biologia Molecular y Validacion de
Tecnicas, InDRE-SSA, Carpio 470 Col. Santo Tomas, Mexico, D.F.
11340, Mexico
FEATURES Location/Qualifiers
source 1..1745
/organism="Influenza A virus
(A/Mexico/InDRE1474/2012(H1N1))"
/mol_type="viral cRNA"
/strain="A/Mexico/InDRE1474/2012"
/serotype="H1N1"
/isolation_source="Nasopharyngeal swab"
/host="human; gender M; age 2"
/db_xref="taxon:1149775"
/segment="4"
/country="Mexico: Mexico City"
/collection_date="26-Jan-2012"
gene 1..1701
/gene="HA"
CDS 1..1701
/gene="HA"
/function="receptor binding and fusion protein"
/codon_start=1
/product="hemagglutinin"
/protein_id="AFB18654.1"
/db_xref="GI:376319286"
/translation="MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVT
HSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECETLSTASSWSYIVETSSS
DNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKG
FYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTTADQQSLYQNADTYVFV
GTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMER
DAGSGIIISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATG
LRNVPSIQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDKI
TNKVNSVIEKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER
TLDYHDSNVKNLYEKVRNQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSE
EAKLNREEIDGVKLESTRIYQILAIYSTAASSLVLVVSLGAISFWMCSNGSLQCRICI
"
sig_peptide 1..51
/gene="HA"
mat_peptide 52..1032
/gene="HA"
/product="HA1"
mat_peptide 1033..1698
/gene="HA"
/product="HA2"
ORIGIN
1 atgaaggcaa tactagtagt tctgctatat acatttgcaa ccgcaaatgc agacacattg
61 tgtataggtt accatgcgaa caattcaaca gacactgtag acacagtact agaaaagaat
121 gtaacagtaa cacactctgt taatcttcta gaagacaagc ataacgggaa actatgcaaa
181 ctaagagggg tagccccatt gcatttgggt aaatgtaaca ttgctggctg gatcctggga
241 aatccagagt gtgaaacact ctccacagca agctcatggt cctacattgt ggaaacatct
301 agttcagaca atggaacgtg ttacccagga gatttcatcg attatgagga gctaagagag
361 caattgagct cagtgtcatc atttgaaagg tttgagatat tccccaagac aagttcatgg
421 cccaatcatg actcgaacaa aggtgtaacg gcagcatgtc ctcatgctgg agcaaaaggc
481 ttctacaaaa atttaatatg gctagttaaa aaaggaaatt catacccaaa gctcagcaaa
541 tcctacatta atgataaagg gaaagaagtc ctcgtgctat ggggcattca ccatccatct
601 actactgctg accaacaaag tctctatcag aatgcagata catatgtttt tgtggggaca
661 tcaagataca gcaagaagtt caagccggaa atagcaataa gacccaaagt gagggatcaa
721 gaagggagaa tgaactatta ctggacacta gtagagccgg gagacaaaat aacattcgaa
781 gcaactggaa atctagtggt accgagatat gcattcgcaa tggaaagaga tgctggatct
841 ggtattatca tttcagatac accagtccac gattgcaata caacttgtca gacacccaag
901 ggtgctataa acaccagcct cccatttcag aatatacatc cgatcacaat tggaaaatgt
961 ccaaaatatg taaaaagcac aaaattgaga ctggccacag gattgaggaa tgtcccgtct
1021 attcaatcta gaggcctatt tggggccatt gccggcttca ttgaaggggg gtggacaggg
1081 atggtagatg gatggtacgg ttatcaccat caaaatgagc aggggtcagg atatgcagcc
1141 gacctgaaga gcacacagaa tgccattgac aagattacta acaaagtaaa ttctgttatt
1201 gaaaaaatga atacacagtt cacagcagta ggtaaagagt tcaaccacct ggaaaaaaga
1261 atagagaatt taaataaaaa agttgatgat gggttcctgg acatttggac ttacaatgcc
1321 gaactgttgg ttctattgga aaatgaaaga actttggact accacgattc aaatgtgaag
1381 aacttatatg aaaaggtaag aaaccagtta aaaaacaatg ccaaggaaat tggaaatggc
1441 tgctttgaat tttaccacaa atgcgataac acgtgtatgg aaagtgtcaa aaatgggact
1501 tatgactacc caaaatactc agaggaagca aaattaaaca gagaagaaat agatggggta
1561 aagctggaat caacaaggat ttaccagatt ttggcgatct attcaactgc cgccagttca
1621 ttggtactgg tagtctccct gggggcaatc agtttttgga tgtgctctaa tgggtctcta
1681 cagtgtagaa tatgtattta acattaggat ttcagaagca tgagaaaaac acccttgttt
1741 ctact

_________________
www.twitter.com/hniman

LOCUS CY110745 1745 bp cRNA linear VRL 17-FEB-2012
DEFINITION Influenza A virus (A/Mexico/InDRE689/2012(H1N1)) hemagglutinin (HA)
gene, complete cds.
ACCESSION CY110745
VERSION CY110745.1 GI:376319289
DBLINK BioProject: PRJNA37813
KEYWORDS .
SOURCE Influenza A virus (A/Mexico/InDRE689/2012(H1N1))
ORGANISM Influenza A virus (A/Mexico/InDRE689/2012(H1N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 1745)
AUTHORS Ramirez-Gonzalez,J.E., Alcantara-Perez,P.A.,
Rodriguez-Maldonado,Ap., Rodriguez-Reyes,B.D., Wong-Arambula,C.E.,
Del Mazo-Lopez,J.C., Cortes-Ortiz,I., Barrera-Badillo,G.,
Lopez-Martinez,I. and Alpuche-Aranda,C.
TITLE Genetic characterization of pandemic Influenza H1N1 virus in Mexico
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1745)
AUTHORS Alcantara-Perez,P.A., Rodriguez-Maldonado,A.P.,
Rodriguez-Reyes,B.D., Wong-Arambula,C.E., Del Mazo-lopez,J.C.,
Cortes-Ortiz,I., Barrera-Badillo,G., Lopez-Martinez,I.,
Alpuche-Aranda,C. and Ramirez-Gonzalez,J.E.
TITLE Direct Submission
JOURNAL Submitted (17-FEB-2012) Biologia Molecular y Validacion de
Tecnicas, InDRE-SSA, Carpio 470 Col. Santo Tomas, Mexico, D.F.
11340, Mexico
FEATURES Location/Qualifiers
source 1..1745
/organism="Influenza A virus
(A/Mexico/InDRE689/2012(H1N1))"
/mol_type="viral cRNA"
/strain="A/Mexico/InDRE689/2012"
/serotype="H1N1"
/isolation_source="Nasopharyngeal swab"
/host="human; gender F; age 35"
/db_xref="taxon:1149774"
/segment="4"
/country="Mexico: Mexico City"
/collection_date="19-Jan-2012"
gene 1..1701
/gene="HA"
CDS 1..1701
/gene="HA"
/function="receptor binding and fusion protein"
/codon_start=1
/product="hemagglutinin"
/protein_id="AFB18656.1"
/db_xref="GI:376319290"
/translation="MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVT
HSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECETLSTASSWSYIVETSSS
DNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKG
FYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTTADQQSLYQNADTYVFV
GTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMER
DAGSGIIISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATG
LRNVPSIQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDKI
TNKVNSVIEKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER
TLDYHDSNVKNLYEKVRNQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSE
EAKLNREEIDGVKLESTRIYQILAIYSTAASSLVLVVSLGAISFWMCSNGSLQCRICI
"
sig_peptide 1..51
/gene="HA"
mat_peptide 52..1032
/gene="HA"
/product="HA1"
mat_peptide 1033..1698
/gene="HA"
/product="HA2"
ORIGIN
1 atgaaggcaa tactagtagt tctgctatat acatttgcaa ccgcaaatgc agacacatta
61 tgtataggtt accatgcgaa caattcaaca gacactgtag acacagtact agaaaagaat
121 gtaacagtaa cacactctgt taatcttcta gaagacaagc ataacgggaa actatgcaaa
181 ctaagagggg tagccccatt gcatttgggt aaatgtaaca ttgctggctg gatcctggga
241 aatccagagt gtgaaacact ctccacagca agctcatggt cctacattgt ggaaacatct
301 agttcagaca atggaacgtg ttacccagga gatttcatcg attatgagga gctaagagag
361 caattgagct cagtgtcatc atttgaaagg tttgagatat tccccaagac aagttcatgg
421 cccaatcatg actcgaacaa aggtgtaacg gcagcatgtc ctcatgctgg agcaaaaggc
481 ttctacaaaa atttaatatg gctagttaaa aaaggaaatt catacccaaa gctcagcaaa
541 tcctacatta atgataaagg gaaagaagtc ctcgtgctat ggggcattca ccatccatct
601 actactgctg accaacaaag tctctatcag aatgcagata catatgtttt tgtggggaca
661 tcaagataca gcaagaagtt caagccggaa atagcaataa gacccaaagt gagggatcaa
721 gaagggagaa tgaactatta ctggacacta gtagagccgg gagacaaaat aacattcgaa
781 gcaactggaa atctagtggt accgagatat gcattcgcaa tggaaagaga tgctggatct
841 ggtattatca tttcagatac accagtccac gattgcaata caacttgtca gacacccaag
901 ggtgctataa acaccagcct cccatttcag aatatacatc cgatcacaat tggaaaatgt
961 ccaaaatatg taaaaagcac aaaattgaga ctggccacag gattgaggaa tgtcccgtct
1021 attcaatcta gaggcctatt tggggccatt gccggcttca ttgaaggggg gtggacaggg
1081 atggtagatg gatggtacgg ttatcaccat caaaatgagc aggggtcagg atatgcagcc
1141 gacctgaaga gcacacaaaa tgccattgac aagattacta acaaagtaaa ttctgttatt
1201 gaaaaaatga atacacagtt cacagcagta ggtaaagagt tcaaccacct ggaaaaaaga
1261 atagagaatt taaataaaaa agttgatgat gggttcctgg acatttggac ttacaatgcc
1321 gaactgttgg ttctattgga aaatgaaaga actttggact accacgattc aaatgtgaag
1381 aacttatatg aaaaggtaag aaaccagtta aaaaacaatg ccaaggaaat tggaaatggc
1441 tgctttgaat tttaccacaa atgcgataac acgtgtatgg aaagtgtcaa aaatgggact
1501 tatgactacc caaaatactc agaggaagca aaattaaaca gagaagaaat agatggggta
1561 aagctggaat caacaaggat ttaccagatt ttggcgatct attcaactgc cgccagttca
1621 ttggtactgg tagtctccct gggggcaatc agtttttgga tgtgctctaa tgggtctcta
1681 cagtgtagaa tatgtattta acattaggat ttcagaagca tgagaaaaac acccttgttt
1741 ctact

_________________
www.twitter.com/hniman

EPI353907 A/Mexico/3723/2011 (A/H1N1 pdm09) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%)
EPI353385 A/Alabama/01/2012 (A/H1N1 pdm09) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%)
EPI353426 A/Texas/05/2012 (A/H1N1 pdm09) segment 4 (HA) 3133.0 0.000000e+00 1699/1701 (99%)
EPI353405 A/Mexico/3720/2011 (A/H1N1 pdm09) segment 4 (HA) 3133.0 0.000000e+00 1699/1701 (99%)
EPI352602 A/Texas/02/2012 (A/H1N1 pdm09) segment 4 (HA) 3133.0 0.000000e+00 1699/1701 (99%)
EPI353423 A/Texas/04/2012 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353411 A/Mexico/56/2011 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353399 A/Maine/01/2012 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353388 A/California/52/2011 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353402 A/Mexico/210/2012 (A/H1N1 pdm09) segment 4 (HA) 3127.5 0.000000e+00 1698/1701 (99%)
EPI353391 A/Colorado/01/2012 (A/H1N1 pdm09) segment 4 (HA) 3125.7 0.000000e+00 1697/1701 (99%)
EPI349358 A/Pennsylvania/16/2011 (A/H1N1 pdm09) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%)
EPI353910 A/Mexico/254/2012 (A/H1N1 pdm09) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%)
EPI353408 A/Mexico/52/2011 (A/H1N1 pdm09) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%)
EPI315878 A/Thailand/CU-H2698/2010 (A/H1N1) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%)
EPI332333 A/Bangkok/INS477/2010 (A/H1N1) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI332317 A/Bangkok/INS479/2010 (A/H1N1) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI332117 A/Bangkok/INS514/2010 (A/H1N1) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI325551 A/American Samoa/4520/2011 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313320 A/Tehran/5963/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313318 A/Tehran/5958/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313284 A/Karaj/6072/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313282 A/Karaj/5987/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313280 A/Karaj/5985/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313201 A/Ghom/215/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI307854 A/Beijing/3907/2010 (A/H1N1) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI301435 A/Tehran/5652/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI298421 A/Karaj/5327/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI336021 A/Ankara/02/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI332253 A/Bangkok/INS492/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI332173 A/Bangkok/INS504/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI332069 A/Khon Kaen/INS523/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI331620 A/SOUTH AUCKLAND/4/2011 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1690/1698 (99%)
EPI321227 A/Sydney/DD3-51/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI316000 A/Thailand/CU-H2358/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI315862 A/Thailand/CU-B4339/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI315730 A/Thailand/CU-H2543/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI313286 A/Karaj/6076/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI313278 A/Karaj/5924/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI313276 A/Karaj/5921/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI313272 A/Karaj/5607/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI304619 A/Ulaanbaatar/190/2011 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI304607 A/Tehran/5675/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI302117 A/Japan/8736/2011 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI301437 A/Tehran/5858/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI307849 A/Beijing/3884/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1690/1699 (99%)
EPI301722 A/California/23/2010 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1691/1701 (99%)
EPI351224 A/Novosibirsk/107k/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI351222 A/Novosibirsk/104k/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI349541 A/Taiwan/2883/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI347816 A/Shenzhen/127/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI338389 A/Latvia/1-138/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI335590 A/Bangkok/INS484/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI335566 A/Bangkok/INS488/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI335550 A/Bangkok/INS502/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI335534 A/Bangkok/INS509/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI333448 A/Moscow/WRAIR1929P/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI332717 A/Phiippines/TMC11-9/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI332309 A/Bangkok/INS480/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI332277 A/Bangkok/INS485/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI332141 A/Bangkok/INS510/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI330324 A/Gansu-Chengguan/SWL579/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI330284 A/Jiangsu-Xinpu/SWL187/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI330076 A/Hunan-Furong/SWL410/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI326202 A/Ukraine/102/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI326195 A/Macedonia/86/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI324430 A/Sydney/DD3-58/2011 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI321019 A/Sydney/DD3-15/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI319434 A/Brussels/S0004/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI315886 A/Thailand/CU-H2911/2011 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI313274 A/Karaj/5795/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI310026 A/Mississippi/04/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI309937 A/Laos/1096/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI309846 A/Deajeon/2780/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI307338 A/Ontario/720545/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI307166 A/Moscow/IIV-33/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI304621 A/Karaj/5685/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI304609 A/Karaj/5718/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI302345 A/BRUNEI/237/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1689/1698 (99%)
EPI302129 A/Arkansas/06/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI302115 A/Japan/8153/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI294405 A/BRUNEI/218/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1689/1698 (99%)
EPI310164 A/Washington/05/2011 (A/H1N1 pdm09) segment 4 (HA) 3085.0 0.000000e+00 1690/1701 (99%)
EPI351215 A/Novosibirsk/105d/2011 (A/H1N1 pdm09) segment 4 (HA) 3083.2 0.000000e+00 1690/1701 (99%)
EPI309934 A/Korea/664/2010 (A/H1N1 pdm09) segment 4 (HA) 3083.2 0.000000e+00 1690/1701 (99%)
EPI351220 A/Novosibirsk/53k/2011 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI346677 A/Iceland/3/2011 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI342454 A/North Carolina/09/2011 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI336843 A/Finland/17/2010 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI336840 A/Finland/20/2010 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI336831 A/Finland/29/2010 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI336828 A/Finland/32/2010 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI333328 A/Moscow/WRAIR4305N/2011 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI332269 A/Bangkok/INS489/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI332229 A/Bangkok/INS495/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI332213 A/Bangkok/INS498/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI332109 A/Bangkok/INS517/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI332077 A/Khon Kaen/INS522/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI332045 A/Bangkok/INS513/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI331605 A/MACAU/200808/2011 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1688/1698 (99%)

_________________
www.twitter.com/hniman

EPI353907 A/Mexico/3723/2011 (A/H1N1 pdm09) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%)
EPI353385 A/Alabama/01/2012 (A/H1N1 pdm09) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%)
EPI353426 A/Texas/05/2012 (A/H1N1 pdm09) segment 4 (HA) 3133.0 0.000000e+00 1699/1701 (99%)
EPI353405 A/Mexico/3720/2011 (A/H1N1 pdm09) segment 4 (HA) 3133.0 0.000000e+00 1699/1701 (99%)
EPI352602 A/Texas/02/2012 (A/H1N1 pdm09) segment 4 (HA) 3133.0 0.000000e+00 1699/1701 (99%)
EPI353423 A/Texas/04/2012 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353411 A/Mexico/56/2011 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353399 A/Maine/01/2012 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353388 A/California/52/2011 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353402 A/Mexico/210/2012 (A/H1N1 pdm09) segment 4 (HA) 3127.5 0.000000e+00 1698/1701 (99%)
EPI353391 A/Colorado/01/2012 (A/H1N1 pdm09) segment 4 (HA) 3125.7 0.000000e+00 1697/1701 (99%)
EPI349358 A/Pennsylvania/16/2011 (A/H1N1 pdm09) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%)
EPI353910 A/Mexico/254/2012 (A/H1N1 pdm09) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%)
EPI353408 A/Mexico/52/2011 (A/H1N1 pdm09) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%)
EPI315878 A/Thailand/CU-H2698/2010 (A/H1N1) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%)
EPI332333 A/Bangkok/INS477/2010 (A/H1N1) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI332317 A/Bangkok/INS479/2010 (A/H1N1) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI332117 A/Bangkok/INS514/2010 (A/H1N1) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI325551 A/American Samoa/4520/2011 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313320 A/Tehran/5963/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313318 A/Tehran/5958/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313284 A/Karaj/6072/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313282 A/Karaj/5987/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313280 A/Karaj/5985/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313201 A/Ghom/215/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI307854 A/Beijing/3907/2010 (A/H1N1) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI301435 A/Tehran/5652/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI298421 A/Karaj/5327/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI336021 A/Ankara/02/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI332253 A/Bangkok/INS492/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI332173 A/Bangkok/INS504/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI332069 A/Khon Kaen/INS523/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI331620 A/SOUTH AUCKLAND/4/2011 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1690/1698 (99%)
EPI321227 A/Sydney/DD3-51/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI316000 A/Thailand/CU-H2358/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI315862 A/Thailand/CU-B4339/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI315730 A/Thailand/CU-H2543/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI313286 A/Karaj/6076/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI313278 A/Karaj/5924/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI313276 A/Karaj/5921/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI313272 A/Karaj/5607/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI304619 A/Ulaanbaatar/190/2011 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI304607 A/Tehran/5675/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI302117 A/Japan/8736/2011 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI301437 A/Tehran/5858/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI307849 A/Beijing/3884/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1690/1699 (99%)
EPI301722 A/California/23/2010 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1691/1701 (99%)
EPI351224 A/Novosibirsk/107k/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI351222 A/Novosibirsk/104k/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI349541 A/Taiwan/2883/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI347816 A/Shenzhen/127/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI338389 A/Latvia/1-138/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI335590 A/Bangkok/INS484/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI335566 A/Bangkok/INS488/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI335550 A/Bangkok/INS502/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI335534 A/Bangkok/INS509/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI333448 A/Moscow/WRAIR1929P/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI332717 A/Phiippines/TMC11-9/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI332309 A/Bangkok/INS480/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI332277 A/Bangkok/INS485/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI332141 A/Bangkok/INS510/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI330324 A/Gansu-Chengguan/SWL579/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI330284 A/Jiangsu-Xinpu/SWL187/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI330076 A/Hunan-Furong/SWL410/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI326202 A/Ukraine/102/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI326195 A/Macedonia/86/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI324430 A/Sydney/DD3-58/2011 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI321019 A/Sydney/DD3-15/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI319434 A/Brussels/S0004/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI315886 A/Thailand/CU-H2911/2011 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI313274 A/Karaj/5795/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI310026 A/Mississippi/04/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI309937 A/Laos/1096/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI309846 A/Deajeon/2780/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI307338 A/Ontario/720545/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI307166 A/Moscow/IIV-33/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI304621 A/Karaj/5685/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI304609 A/Karaj/5718/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI302345 A/BRUNEI/237/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1689/1698 (99%)
EPI302129 A/Arkansas/06/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI302115 A/Japan/8153/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI294405 A/BRUNEI/218/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1689/1698 (99%)
EPI310164 A/Washington/05/2011 (A/H1N1 pdm09) segment 4 (HA) 3085.0 0.000000e+00 1690/1701 (99%)
EPI351215 A/Novosibirsk/105d/2011 (A/H1N1 pdm09) segment 4 (HA) 3083.2 0.000000e+00 1690/1701 (99%)
EPI309934 A/Korea/664/2010 (A/H1N1 pdm09) segment 4 (HA) 3083.2 0.000000e+00 1690/1701 (99%)
EPI351220 A/Novosibirsk/53k/2011 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI346677 A/Iceland/3/2011 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI342454 A/North Carolina/09/2011 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI336843 A/Finland/17/2010 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI336840 A/Finland/20/2010 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI336831 A/Finland/29/2010 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI336828 A/Finland/32/2010 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI333328 A/Moscow/WRAIR4305N/2011 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI332269 A/Bangkok/INS489/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI332229 A/Bangkok/INS495/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI332213 A/Bangkok/INS498/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI332109 A/Bangkok/INS517/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI332077 A/Khon Kaen/INS522/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI332045 A/Bangkok/INS513/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI331605 A/MACAU/200808/2011 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1688/1698 (99%)

_________________
www.twitter.com/hniman

How do these isolates compare with the pH1N1 used in the trivalent vaccine and with those that killed several people in Chihuahua late last season?

_________________
I used to think I had to understand in order to believe, but then I realized that I had to believe in order to understand. - Augustine

These are the clade with S188T, which became dominant worldwide last season.

_________________
www.twitter.com/hniman

first seen in India, May 2010

_________________
no patents on genes, publish the GISAID sequences !

EPI355257 A/Mexico/InDRE689/2012 (A/H1N1) segment 4 (HA) 3142.3 0.000000e+00 1701/1701 (100%)
EPI356265 A/California/12/2012 (A/H1N1 pdm09) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%)
EPI356259 A/Missouri/03/2012 (A/H1N1 pdm09) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%)
EPI355209 A/Colorado/01/2012 (A/H1N1 pdm09) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%)
EPI353907 A/Mexico/3723/2011 (A/H1N1 pdm09) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%)
EPI353385 A/Alabama/01/2012 (A/H1N1 pdm09) segment 4 (HA) 3136.7 0.000000e+00 1700/1701 (99%)
EPI353426 A/Texas/05/2012 (A/H1N1 pdm09) segment 4 (HA) 3133.0 0.000000e+00 1699/1701 (99%)
EPI353405 A/Mexico/3720/2011 (A/H1N1 pdm09) segment 4 (HA) 3133.0 0.000000e+00 1699/1701 (99%)
EPI352602 A/Texas/02/2012 (A/H1N1 pdm09) segment 4 (HA) 3133.0 0.000000e+00 1699/1701 (99%)
EPI356271 A/North Carolina/04/2012 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI355255 A/Mexico/InDRE1474/2012 (A/H1N1) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353423 A/Texas/04/2012 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353411 A/Mexico/56/2011 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353399 A/Maine/01/2012 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353388 A/California/52/2011 (A/H1N1 pdm09) segment 4 (HA) 3131.2 0.000000e+00 1699/1701 (99%)
EPI353402 A/Mexico/210/2012 (A/H1N1 pdm09) segment 4 (HA) 3127.5 0.000000e+00 1698/1701 (99%)
EPI353391 A/Colorado/01/2012 (A/H1N1 pdm09) segment 4 (HA) 3125.7 0.000000e+00 1697/1701 (99%)
EPI349358 A/Pennsylvania/16/2011 (A/H1N1 pdm09) segment 4 (HA) 3125.7 0.000000e+00 1698/1701 (99%)
EPI356281 A/Texas/18/2012 (A/H1N1 pdm09) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%)
EPI353910 A/Mexico/254/2012 (A/H1N1 pdm09) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%)
EPI353408 A/Mexico/52/2011 (A/H1N1 pdm09) segment 4 (HA) 3120.1 0.000000e+00 1697/1701 (99%)
EPI356274 A/Delaware/01/2012 (A/H1N1 pdm09) segment 4 (HA) 3105.3 0.000000e+00 1694/1701 (99%)
EPI315878 A/Thailand/CU-H2698/2010 (A/H1N1) segment 4 (HA) 3103.5 0.000000e+00 1694/1701 (99%)
EPI356262 A/Idaho/03/2012 (A/H1N1 pdm09) segment 4 (HA) 3099.8 0.000000e+00 1693/1701 (99%)
EPI332333 A/Bangkok/INS477/2010 (A/H1N1) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI332317 A/Bangkok/INS479/2010 (A/H1N1) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI332117 A/Bangkok/INS514/2010 (A/H1N1) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI325551 A/American Samoa/4520/2011 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313320 A/Tehran/5963/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313318 A/Tehran/5958/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313284 A/Karaj/6072/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313282 A/Karaj/5987/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313280 A/Karaj/5985/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI313201 A/Ghom/215/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI307854 A/Beijing/3907/2010 (A/H1N1) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI301435 A/Tehran/5652/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI298421 A/Karaj/5327/2010 (A/H1N1 pdm09) segment 4 (HA) 3098.0 0.000000e+00 1693/1701 (99%)
EPI356280 A/Utah/06/2012 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1692/1701 (99%)
EPI336021 A/Ankara/02/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI332253 A/Bangkok/INS492/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI332173 A/Bangkok/INS504/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI332069 A/Khon Kaen/INS523/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI331620 A/SOUTH AUCKLAND/4/2011 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1690/1698 (99%)
EPI321227 A/Sydney/DD3-51/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI316000 A/Thailand/CU-H2358/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI315862 A/Thailand/CU-B4339/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI315730 A/Thailand/CU-H2543/2010 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI313286 A/Karaj/6076/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI313278 A/Karaj/5924/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI313276 A/Karaj/5921/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI313272 A/Karaj/5607/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI304619 A/Ulaanbaatar/190/2011 (A/H1N1) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI304607 A/Tehran/5675/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI302117 A/Japan/8736/2011 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI301437 A/Tehran/5858/2010 (A/H1N1 pdm09) segment 4 (HA) 3092.4 0.000000e+00 1692/1701 (99%)
EPI307849 A/Beijing/3884/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1690/1699 (99%)
EPI301722 A/California/23/2010 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1691/1701 (99%)
EPI351224 A/Novosibirsk/107k/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI351222 A/Novosibirsk/104k/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI349541 A/Taiwan/2883/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI347816 A/Shenzhen/127/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI338389 A/Latvia/1-138/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI335590 A/Bangkok/INS484/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI335566 A/Bangkok/INS488/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI335550 A/Bangkok/INS502/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI335534 A/Bangkok/INS509/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI333448 A/Moscow/WRAIR1929P/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI332717 A/Phiippines/TMC11-9/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI332309 A/Bangkok/INS480/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI332277 A/Bangkok/INS485/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI332141 A/Bangkok/INS510/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI330324 A/Gansu-Chengguan/SWL579/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI330284 A/Jiangsu-Xinpu/SWL187/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI330076 A/Hunan-Furong/SWL410/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI326202 A/Ukraine/102/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI326195 A/Macedonia/86/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI324430 A/Sydney/DD3-58/2011 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI321019 A/Sydney/DD3-15/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI319434 A/Brussels/S0004/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI315886 A/Thailand/CU-H2911/2011 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI313274 A/Karaj/5795/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI310026 A/Mississippi/04/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI309937 A/Laos/1096/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI309846 A/Deajeon/2780/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI307338 A/Ontario/720545/2010 (A/H1N1) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI307166 A/Moscow/IIV-33/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI304621 A/Karaj/5685/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI304609 A/Karaj/5718/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI302345 A/BRUNEI/237/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1689/1698 (99%)
EPI302129 A/Arkansas/06/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI302115 A/Japan/8153/2011 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1691/1701 (99%)
EPI294405 A/BRUNEI/218/2010 (A/H1N1 pdm09) segment 4 (HA) 3086.9 0.000000e+00 1689/1698 (99%)
EPI310164 A/Washington/05/2011 (A/H1N1 pdm09) segment 4 (HA) 3085.0 0.000000e+00 1690/1701 (99%)
EPI351215 A/Novosibirsk/105d/2011 (A/H1N1 pdm09) segment 4 (HA) 3083.2 0.000000e+00 1690/1701 (99%)
EPI309934 A/Korea/664/2010 (A/H1N1 pdm09) segment 4 (HA) 3083.2 0.000000e+00 1690/1701 (99%)
EPI351220 A/Novosibirsk/53k/2011 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI346677 A/Iceland/3/2011 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI342454 A/North Carolina/09/2011 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI336843 A/Finland/17/2010 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)
EPI336840 A/Finland/20/2010 (A/H1N1 pdm09) segment 4 (HA) 3081.3 0.000000e+00 1690/1701 (99%)

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www.twitter.com/hniman

Over the past several weeks, the proportion of 2009 H1N1 viruses identified has increased nationally and in several regions, most notably in Regions 6, 8, and 9.
(Western states including TX & CA)
http://www.cdc.gov/flu/weekly/

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www.twitter.com/hniman