Rhiza Labs FluTracker Forum

WHO regional center in Australia has released new H1N1 sequences as well as a new H1N1 vaccine target A/Victoria/502/2010 (IVR-159) which has Q226R (as did A/South Carolina/02/2010). A sequence from an egg isolate, released a year ago had D225G, while an MDCK isolate is wild type at 225 and 226.

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INFLUENZA (47): ECDC REPORT, VIRUS CHARACTERIZATION
***************************************************
A ProMED-mail post
<http://www.promedmail.org>
ProMED-mail is a program of the
International Society for Infectious Diseases
<http://www.isid.org>

[1]
Date: Mon 15 Aug 2011
Source: CIDRAP (Center for Infectious Disease Research & Policy) News
[edited]
<http://www.cidrap.umn.edu/cidrap/content/fs/food/news/aug1511newsscan.html>


EU report says flu virus isolates still well matched to vaccine
---------------------------------------------------------------
The latest technical report on influenza viruses from the European
Centre for Disease Prevention and Control (ECDC) [see item (2) below],
based on 250 specimens received from European countries from February
to June [2011], shows that although the viruses varied genetically,
those that predominate remain quite well matched to the currently
recommended vaccine. Specifically, all 2009 H1N1 virus groups
represented show antigenic similarity to the A/California/7/2009
vaccine virus, and viruses of the B/Victoria/2/87 lineage remain
genetically and antigenically similar to the B/Brisbane/60/2008
vaccine virus. Isolates of influenza A/H3N2 and of the B/Yamagata
lineage also continued to be received but neither appeared to fall
outside current vaccine coverage.

--
Communicated by:
ProMED-mail
<promed@promedmail.org>

******
[2]
Date: Fri 12 Aug 2011
Source: European Centre for Disease Prevention and Control (ECDC)
[edited]
<http://ecdc.europa.eu/en/press/news/Lists/News/ECDC_DispForm.aspx?List=32e43ee8-e230-4424-a783-85742124029a&ID=470&RootFolder=%2Fen%2Fpress%2Fnews%2FLists%2FNews>


ECDC updates its technical document on influenza virus
characterisation
----------------------------------------------------------------------
Today [12 Aug 2011], the ECDC [European Centre for Disease Prevention
and Control] published its technical document on influenza virus
characterisation. Since the last influenza virus characterisation
report, 250 virus specimens collected from February to June 2011 have
been received from EU and EU-affiliated countries. More specifically,
influenza A(H1N1)pdm, influenza A(H3N2), and influenza B/Victoria- and
B/Yamagata-lineage viruses have been characterised genetically and
antigenically. Some of the findings are:

- Recently isolated A(H1N1)pdm [also designated A(H1N1) 2009] viruses
continue to fall into several genetic groups but all groups show
antigenic similarity to the currently recommended vaccine virus
A/California/7/2009.
- A(H3N2) viruses fall into distinct genetic groups but there is no
consistent correlation of altered antigenicity with any genetic group,
compared with the vaccine virus A/Perth/16/2009.
- Influenza B viruses of the B/Victoria/2/87 lineage predominate over
those of the B/Yamagata/16/88 lineage. Most of the B/Victoria/2/87
lineage viruses remain genetically and antigenically similar to the
currently recommended vaccine virus B/Brisbane/60/2008.
- The majority of influenza B viruses of the B/Yamagata-lineage are in
the B/Bangladesh/3333/2007 genetic clade but viruses received from 3
countries with Baltic coastlines fall within a different genetic
clade.

--
Communicated by:
ProMED-mail
<promed@promedmail.org>

[These data indicate that overall the currently recommended vaccine is
well-matched to the influenza viruses that have been circulating in
Europe during the past winter. - Mod.CP]

[see also:
Influenza (44): WHO update 20110716.2155]
.................................................cp/mj/mpp

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Pure propaganda

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Top 100 HA matches

EPI331269 IVR-159(A/VICTORIA/502/2010) (A/H1N1 swl) segment 4 (HA) 3118.3 0.000000e+00 1688/1688 (100%)
EPI331668 A/VICTORIA/502/2010 (A/H1N1 swl) segment 4 (HA) 3112.7 0.000000e+00 1687/1688 (99%)
EPI278599 A/Victoria/502/2010 (A/H1N1 swl) segment 4 (HA) 3107.2 0.000000e+00 1686/1688 (99%)
EPI280335 A/Brisbane/10/2010 (A/H1N1 swl) segment 4 (HA) 3098.0 0.000000e+00 1684/1688 (99%)
EPI332389 A/North Fitzroy/INS469/2010 (A/H1N1) segment 4 (HA) 3096.1 0.000000e+00 1684/1688 (99%)
EPI332205 A/Bangkok/INS499/2010 (A/H1N1) segment 4 (HA) 3096.1 0.000000e+00 1684/1688 (99%)
EPI321203 A/Sydney/DD3-47/2010 (A/H1N1) segment 4 (HA) 3096.1 0.000000e+00 1684/1688 (99%)
EPI295752 A/England/3380426/2010 (A/H1N1 swl) segment 4 (HA) 3096.1 0.000000e+00 1684/1688 (99%)
EPI279043 A/SINGAPORE/572/2010 (A/H1N1 swl) segment 4 (HA) 3096.1 0.000000e+00 1684/1688 (99%)
EPI279038 A/SINGAPORE/584/2010 (A/H1N1 swl) segment 4 (HA) 3096.1 0.000000e+00 1684/1688 (99%)
EPI278594 A/Brisbane/10/2010 (A/H1N1 swl) segment 4 (HA) 3096.1 0.000000e+00 1684/1688 (99%)
EPI301692 A/Taiwan/439/2010 (A/H1N1 swl) segment 4 (HA) 3092.4 0.000000e+00 1683/1688 (99%)
EPI280338 A/Brisbane/12/2010 (A/H1N1 swl) segment 4 (HA) 3092.4 0.000000e+00 1683/1688 (99%)
EPI271772 A/Singapore/SS004/2010 (A/H1N1 swl) segment 4 (HA) 3092.4 0.000000e+00 1683/1688 (99%)
EPI332301 A/Bangkok/INS481/2010 (A/H1N1) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI320947 A/Sydney/DD3-05/2010 (A/H1N1) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI302538 A/Shanghai-Zhangning/SWL1700/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI301427 A/Milano/4/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI294279 A/TOWNSVILLE/28/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI279101 A/BRISBANE/21/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI279053 A/DARWIN/44/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI279035 A/DARWIN/35/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI279015 A/DARWIN/29/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI279012 A/DARWIN/23/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI279009 A/DARWIN/17/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI279006 A/DARWIN/12/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI279003 A/DARWIN/7/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI279000 A/DARWIN/3/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI278595 A/Brisbane/12/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI278580 A/Norway/445/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI272049 A/VICTORIA/800/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI258164 A/Fujian-Licheng/SWL126/2010 (A/H1N1 swl) segment 4 (HA) 3090.6 0.000000e+00 1683/1688 (99%)
EPI332061 A/Westmead/INS524/2010 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI331699 A/SYDNEY/23/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI331698 A/SYDNEY/27/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI324657 A/Chile/29/2010 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI324641 A/Chile/23/2010 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI323655 A/England/862/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI323631 A/England/1111/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI321059 A/Sydney/DD3-22/2010 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI321051 A/Sydney/DD3-19/2010 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI321043 A/Sydney/DD3-18/2010 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI320963 A/Sydney/DD3-07/2010 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI320955 A/Sydney/DD3-06/2010 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI313249 A/Hong Kong/433397/2009 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI308865 A/San Diego/INS194/2009 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI308613 A/Terrassa/INS94/2009 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI302574 A/Thailand/C602/2010 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI297199 A/Sendai/TU1004/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI297165 A/Sendai/TU502/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI297157 A/Sendai/TU483/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI294414 A/AUCKLAND/118/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI294144 A/SYDNEY/16/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI294076 A/TOWNSVILLE/13/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI292184 A/Finland/605/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI281685 A/Alagoas/140/2010 (A/H1N1) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI279168 A/PERTH/518/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI279068 A/BRISBANE/17/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI279056 A/DARWIN/46/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI279040 A/SINGAPORE/585/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI279032 A/PERTH/12/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI277268 A/Bangkok/INS428/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI277049 A/Singapore/527/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI277034 A/Singapore/471/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI276588 A/ENG/911/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI276555 A/ENG/95060207/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI276535 A/ENG/906/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI276455 A/ENG/834/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI276446 A/ENG/827/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI276445 A/ENG/829/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI276430 A/SC/94420029/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI276379 A/ENG/738/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI273876 A/Hong Kong/1880/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI273727 A/West Virginia/01/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI272010 A/WELLINGTON/2/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI271973 A/SAMUTPRAKAN/102/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI271499 A/San Diego/INS215/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI270878 A/San Diego/INS202/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI270575 A/California/VRDL127/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI270495 A/California/VRDL117/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI270423 A/California/VRDL108/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI269960 A/Brisbane/7/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI267912 A/Iran/16245/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI263491 A/Singapore/ON2193/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI263483 A/Singapore/ON2063/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI263481 A/Singapore/ON2018/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI263421 A/Singapore/GP3491/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI263414 A/Singapore/GP3084/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI263409 A/Singapore/GP2362/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1680/1685 (99%)
EPI258758 A/San Diego/INS74/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI258180 A/Guangxi-Xixiangtang/SWL118/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI258156 A/Fujian-Gulou/SWL1141/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI258032 A/Fujian-Gulou/SWL1338/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI257896 A/Guangdong-Chancheng/SWL178/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI257752 A/Zhejiang-Xiacheng/SWL167/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI257624 A/Guangdong-Luohu/SWL130/2010 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI257348 A/Hunan-Yuhua/SWL11707/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI257284 A/Fujian-Gulou/SWL11875/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI256498 A/Guangdong-Luohu/SWL1792/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)
EPI256054 A/Beijing-Xicheng/SWL11336/2009 (A/H1N1 swl) segment 4 (HA) 3085.0 0.000000e+00 1682/1688 (99%)

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Isolate name: IVR-159(A/VICTORIA/502/2010)
Isolate ID: EPI_ISL_94779
Passage details/history: E3/D7
Type: A / H1N1
Lineage: swl
2011-01-24
Host Human
Additional host information:
Zip code:
Patient status:
Last vaccinated:
In-vivo pathogenicity test:
Location: Australia / Victoria
Additional location information:
Patient age:
Gender:
Outbreak:
Treatment:
Specimen source:
Institute information
Originating lab: CSL Ltd

Sample ID given by the sample provider: VI 1545
Address: CSL Ltd
45 Poplar Rd
Parkville, Victoria 3052
Australia

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Commentary

http://www.recombinomics.com/News/08181 ... e_WHO.html

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Another H1N1 vaccine target has been selected by WHO in Australia, IVR-162A/BRISBANE/70/2011), which is an S188T subclade with G158E and Q226R.

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Top 100 matches

EPI333107 IVR-162(A/BRISBANE/70/2011) (A/H1N1 swl) segment 4 (HA) 3136.7 0.000000e+00 1698/1698 (100%)
EPI333105 A/SOUTH AUSTRALIA/4/2011 (A/H1N1 swl) segment 4 (HA) 3114.6 0.000000e+00 1694/1698 (99%)
EPI333112 A/BRISBANE/190/2011 (A/H1N1 swl) segment 4 (HA) 3110.9 0.000000e+00 1693/1698 (99%)
EPI331653 A/BRISBANE/152/2011 (A/H1N1 swl) segment 4 (HA) 3110.9 0.000000e+00 1693/1698 (99%)
EPI331626 A/BRISBANE/156/2011 (A/H1N1 swl) segment 4 (HA) 3110.9 0.000000e+00 1693/1698 (99%)
EPI331599 A/TASMANIA/6/2011 (A/H1N1 swl) segment 4 (HA) 3109.0 0.000000e+00 1693/1698 (99%)
EPI331549 A/BRISBANE/121/2011 (A/H1N1 swl) segment 4 (HA) 3109.0 0.000000e+00 1693/1698 (99%)
EPI331650 A/TASMANIA/16/2011 (A/H1N1 swl) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI333109 A/BRISBANE/500/2011 (A/H1N1 swl) segment 4 (HA) 3103.5 0.000000e+00 1692/1698 (99%)
EPI331474 A/TOWNSVILLE/47/2011 (A/H1N1 swl) segment 4 (HA) 3101.6 0.000000e+00 1685/1688 (99%)
EPI333005 A/BRISBANE/142/2011 (A/H1N1 swl) segment 4 (HA) 3094.3 0.000000e+00 1683/1687 (99%)
EPI331579 A/BRISBANE/127/2011 (A/H1N1 swl) segment 4 (HA) 3092.4 0.000000e+00 1683/1688 (99%)
EPI331558 A/NEWCASTLE/1/2011 (A/H1N1 swl) segment 4 (HA) 3092.4 0.000000e+00 1683/1688 (99%)
EPI331582 A/TASMANIA/14/2011 (A/H1N1 swl) segment 4 (HA) 3086.9 0.000000e+00 1682/1688 (99%)
EPI330316 A/Jilin-Chuanying/SWL1186/2011 (A/H1N1 swl) segment 4 (HA) 3086.9 0.000000e+00 1689/1698 (99%)
EPI309846 A/Deajeon/2780/2010 (A/H1N1 swl) segment 4 (HA) 3086.9 0.000000e+00 1689/1698 (99%)
EPI320909 A/Singapore/TT5/2011 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1688/1698 (99%)
EPI320877 A/Singapore/GP511/2011 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1688/1698 (99%)
EPI320875 A/Singapore/GP4682/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1688/1698 (99%)
EPI315878 A/Thailand/CU-H2698/2010 (A/H1N1) segment 4 (HA) 3081.3 0.000000e+00 1688/1698 (99%)
EPI302420 A/VICTORIA/502/2011 (A/H1N1 swl) segment 4 (HA) 3081.3 0.000000e+00 1688/1698 (99%)
EPI302345 A/BRUNEI/237/2010 (A/H1N1 swl) segment 4 (HA) 3081.3 0.000000e+00 1688/1698 (99%)
EPI294405 A/BRUNEI/218/2010 (A/H1N1 swl) segment 4 (HA) 3081.3 0.000000e+00 1688/1698 (99%)
EPI332333 A/Bangkok/INS477/2010 (A/H1N1) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI332317 A/Bangkok/INS479/2010 (A/H1N1) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI332117 A/Bangkok/INS514/2010 (A/H1N1) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI319434 A/Brussels/S0004/2011 (A/H1N1 swl) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI313320 A/Tehran/5963/2010 (A/H1N1 swl) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI313318 A/Tehran/5958/2010 (A/H1N1 swl) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI313284 A/Karaj/6072/2010 (A/H1N1 swl) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI313282 A/Karaj/5987/2010 (A/H1N1 swl) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI313280 A/Karaj/5985/2010 (A/H1N1 swl) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI313201 A/Ghom/215/2010 (A/H1N1 swl) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI307854 A/Beijing/3907/2010 (A/H1N1) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI301435 A/Tehran/5652/2010 (A/H1N1 swl) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI298421 A/Karaj/5327/2010 (A/H1N1 swl) segment 4 (HA) 3075.8 0.000000e+00 1687/1698 (99%)
EPI326224 A/Slovakia/150/2011 (A/H1N1 swl) segment 4 (HA) 3073.9 0.000000e+00 1686/1698 (99%)
EPI326244 A/Stockholm/14/2011 (A/H1N1 swl) segment 4 (HA) 3072.1 0.000000e+00 1686/1698 (99%)
EPI318257 A/Stockholm/14/2011 (A/H1N1 swl) segment 4 (HA) 3072.1 0.000000e+00 1686/1698 (99%)
EPI332253 A/Bangkok/INS492/2010 (A/H1N1) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI332173 A/Bangkok/INS504/2010 (A/H1N1) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI332069 A/Khon Kaen/INS523/2010 (A/H1N1) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI321227 A/Sydney/DD3-51/2010 (A/H1N1) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI320883 A/Singapore/GP62/2011 (A/H1N1) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI316000 A/Thailand/CU-H2358/2010 (A/H1N1) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI315862 A/Thailand/CU-B4339/2010 (A/H1N1) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI315730 A/Thailand/CU-H2543/2010 (A/H1N1) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI313286 A/Karaj/6076/2010 (A/H1N1 swl) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI313278 A/Karaj/5924/2010 (A/H1N1 swl) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI313276 A/Karaj/5921/2010 (A/H1N1 swl) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI313272 A/Karaj/5607/2010 (A/H1N1 swl) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI304619 A/Ulaanbaatar/190/2011 (A/H1N1) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI304607 A/Tehran/5675/2010 (A/H1N1 swl) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI302117 A/Japan/8736/2011 (A/H1N1 swl) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI301437 A/Tehran/5858/2010 (A/H1N1 swl) segment 4 (HA) 3070.3 0.000000e+00 1686/1698 (99%)
EPI307849 A/Beijing/3884/2010 (A/H1N1) segment 4 (HA) 3066.6 0.000000e+00 1684/1696 (99%)
EPI301722 A/California/23/2010 (A/H1N1 swl) segment 4 (HA) 3066.6 0.000000e+00 1685/1698 (99%)
EPI332717 A/Phiippines/TMC11-9/2011 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI332309 A/Bangkok/INS480/2010 (A/H1N1) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI332277 A/Bangkok/INS485/2010 (A/H1N1) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI332141 A/Bangkok/INS510/2010 (A/H1N1) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI331605 A/MACAU/200808/2011 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI331286 A/VICTORIA/504/2011 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI330324 A/Gansu-Chengguan/SWL579/2011 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI330284 A/Jiangsu-Xinpu/SWL187/2011 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI330076 A/Hunan-Furong/SWL410/2011 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI326202 A/Ukraine/102/2011 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI326195 A/Macedonia/86/2011 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI324430 A/Sydney/DD3-58/2011 (A/H1N1) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI321019 A/Sydney/DD3-15/2010 (A/H1N1) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI320893 A/Singapore/KK68/2011 (A/H1N1) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI320141 A/St. Petersburg/100/2011 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI316435 A/St. Petersburg/100/2011 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI315886 A/Thailand/CU-H2911/2011 (A/H1N1) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI315870 A/Thailand/CU-H2548/2010 (A/H1N1) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI313274 A/Karaj/5795/2010 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI310026 A/Mississippi/04/2011 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI309937 A/Laos/1096/2010 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI307338 A/Ontario/720545/2010 (A/H1N1) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI307166 A/Moscow/IIV-33/2010 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI304621 A/Karaj/5685/2010 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI304609 A/Karaj/5718/2010 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI302386 A/TOWNSVILLE/72/2010 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI302129 A/Arkansas/06/2010 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI302115 A/Japan/8153/2011 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI294391 A/SYDNEY/217/2010 (A/H1N1 swl) segment 4 (HA) 3064.7 0.000000e+00 1685/1698 (99%)
EPI310164 A/Washington/05/2011 (A/H1N1 swl) segment 4 (HA) 3062.9 0.000000e+00 1684/1698 (99%)
EPI330348 A/Hunan-Yuhua/SWL173/2011 (A/H1N1 swl) segment 4 (HA) 3061.0 0.000000e+00 1684/1698 (99%)
EPI320158 A/Ukraine/130/2011 (A/H1N1 swl) segment 4 (HA) 3061.0 0.000000e+00 1683/1698 (99%)
EPI316395 A/North Carolina/06/2011 (A/H1N1 swl) segment 4 (HA) 3061.0 0.000000e+00 1684/1698 (99%)
EPI309934 A/Korea/664/2010 (A/H1N1 swl) segment 4 (HA) 3061.0 0.000000e+00 1684/1698 (99%)
EPI332724 A/Jiangsu-suzhou/J41/2011 (A/H1N1) segment 4 (HA) 3059.2 0.000000e+00 1684/1698 (99%)
EPI332665 A/SYDNEY/5/2011 (A/H1N1 swl) segment 4 (HA) 3059.2 0.000000e+00 1684/1698 (99%)
EPI332269 A/Bangkok/INS489/2010 (A/H1N1) segment 4 (HA) 3059.2 0.000000e+00 1684/1698 (99%)
EPI332229 A/Bangkok/INS495/2010 (A/H1N1) segment 4 (HA) 3059.2 0.000000e+00 1684/1698 (99%)
EPI332213 A/Bangkok/INS498/2010 (A/H1N1) segment 4 (HA) 3059.2 0.000000e+00 1684/1698 (99%)
EPI332109 A/Bangkok/INS517/2010 (A/H1N1) segment 4 (HA) 3059.2 0.000000e+00 1684/1698 (99%)
EPI332077 A/Khon Kaen/INS522/2010 (A/H1N1) segment 4 (HA) 3059.2 0.000000e+00 1684/1698 (99%)
EPI332045 A/Bangkok/INS513/2010 (A/H1N1) segment 4 (HA) 3059.2 0.000000e+00 1684/1698 (99%)
EPI330180 A/Beijing-Xicheng/SWL1261/2011 (A/H1N1 swl) segment 4 (HA) 3059.2 0.000000e+00 1684/1698 (99%)

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Collection date is July 25, 2011.

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N132T

EPI333107 IVR-162(A/BRISBANE/70/2011) (A/H1N1 swl) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI273865 A/Washington/01/2010 (A/H1N1 swl) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI273650 A/California/07/2010 (A/H1N1 swl) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI248578 A/Almaty/05/1998 (A/H1N1 seasonal) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI248551 A/Almaty/1044/1983 (A/H1N1 seasonal) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI244484 A/swine/Changhua/199-3/2000 (A/H1N1) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI244471 A/swine/Kaohsiung/38-2/2002 (A/H1N1) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI244470 A/swine/Taoyuan/45-8/2002 (A/H1N1) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI244468 A/swine/Taipei/149-10/2002 (A/H1N1) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI242636 A/swine/USA/1976/1931 (A/H1N1) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI158898 A/chicken/AR/30402/1999 (A/H1N1) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI131394 A/swine/Iowa/15/30 (A/H1N1) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI130579 A/swine/Iowa/1976/1931 (A/H1N1) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI130514 A/Alma Ata/1417/84 (A/H1N1 seasonal) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI16512 A/London/1/1919 (A/H1N1) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI16510 A/London/1/1918 (A/H1N1) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI5571 A/South Carolina/1/18 (A/H1N1 seasonal) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI5569 A/New_York/1/18 (A/H1N1 seasonal) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)
EPI5567 A/Brevig Mission/1/1918 (A/H1N1 seasonal) segment 4 (HA) 27.0 6.922503e+00 14/14 (100%)

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