Rhiza Labs FluTracker Forum

The above list is REAL DATA which is NOT "lab error". It demonstrates the conservation of HUMAN H3N2 sequences in SWINE. There are many more swine and turkey sequences above because there is more testing in North America than Korea or Japan. For the the Japan sequences, most of the matches were human because testing in Korea and Japan is limited. Moreover, different human sequences have jumped to swine in Japan than those which jumped in North America.

In North America, most H3 in swine traces back to the early 1990's. The above sequence was from a 1996 HUMAN H3N2 that jumped to swine. It evolves more slowly in swine, so an EXACT MATCH is still circulating in 2010 in swine. In contrast, there are ZERO human matches prior to 1996 and ZERO human matches after 1996 (even though Genbank has MANY more human H3 sequences than swine or any other species). All human matches (in NY, IN, WI and TAIWAN) are from 1996. In ccontrast this HUMAN segment is maintained in swine from 1999 to 2010 (based on public sequences - it actually jumped in 1996, but no such sequences are in the database). Thus, swine acts as a reservoir for OLDER human influenza sequences which are NOT found in current sequences , or even human sequences from isolate collected one year beofre or after 1996.

GSGS posts utter nonsense. claiming that old human sequence must been from lab contamination.

As seen by the list above, the human sequences are in swine and turkey isolates collected between 1999 and 2010. The sequences are from MANY labs and are EXACT matches (notice the end of each line says 100%).

The sequence above was run against the entire Genbank datatbase and all EXACT matches in the entire database are listed.

GSGS has no clue and either has no idea of what is in the database, or is deliberately misleading. The conservation of human sequences in swine is NOT new and is NOT an lab error.

The above data is real and does NOT match GSGS' mantra or fantasy, which he posts all over the internet. The nonsense is a PURE figment of his imagination.

_________________
www.twitter.com/hniman

Here is a somewhat more conserved 60 BP segement, so it is present in a wider range of human isolates (both before and after 1996). However, it is not present in human seasonal H3N2 after 1998, yet it is still circulating in swine in 2010 (and once again the 1996 human sequences in 2010 swine sequences is NOT due to lab error and is NOT a coincidence):
TAGATCTCTGGTCTTACAACGCGGAGCTTCTTGTTGCCCTGGAGAACCAACATACAATTG

JN162053.1 Influenza A virus (A/swine/Iowa/A01049317/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
JN162051.1 Influenza A virus (A/swine/Iowa/A01049254/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
JF833345.1 Influenza A virus (A/swine/Iowa/A01049185/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
JF833340.1 Influenza A virus (A/swine/Iowa/A01049160/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
JF833334.1 Influenza A virus (A/swine/Iowa/A01049113/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
JF812293.1 Influenza A virus (A/swine/Iowa/A01049112/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825243.1 Influenza A virus (A/swine/QC/2108-2/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825190.1 Influenza A virus (A/swine/QC/382/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825166.1 Influenza A virus (A/turkey/BC/1529-3/2005(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
JF312065.1 Influenza A virus (A/swine/Pennsylvania/62170-4/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
JF312064.1 Influenza A virus (A/swine/Pennsylvania/62170-2/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
JF411012.1 Influenza A virus (A/swine/Quebec/1259260/2010(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
CY086920.1 Influenza A virus (A/swine/Minnesota/239105/2009(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
GU937743.1 Influenza A virus (A/Kansas/13/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
JF263536.1 Influenza A virus (A/swine/Pennsylvania/62170-3/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
JF263535.1 Influenza A virus (A/swine/Pennsylvania/62170-1/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ734189.1 Influenza A virus (A/swine/Illinois/53612-2/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ734186.1 Influenza A virus (A/swine/Illinois/53612-1/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
CY077874.1 Influenza A virus (A/Netherlands/823/1992(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
GU135891.1 Influenza A virus (A/swine/Iowa/H03BF5/2003(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
GU135918.1 Influenza A virus (A/swine/Iowa/H03HB4/2003(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ315643.1 Influenza A virus (A/swine/Minnesota/1300/2007(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
CY073706.1 Influenza A virus (A/Oklahoma/5098/1996(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
GU931688.1 Influenza A virus (A/swine/Indonesia/P6-09-04/2004(H3N1)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
GU289666.1 Influenza A virus (A/swine/Wisconsin/R7c/2001(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
FJ519977.1 Influenza A virus (A/swine/Minnesota/7931/2007(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
FJ519976.1 Influenza A virus (A/swine/Minnesota/5947/2007(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
FJ519974.1 Influenza A virus (A/swine/Minnesota/578/2007(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
FJ519973.1 Influenza A virus (A/swine/Minnesota/66960/2006(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
FJ519972.1 Influenza A virus (A/swine/Minnesota/66853/2006(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
FJ410140.1 Influenza A virus (A/swine/Minnesota/1145/2007(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY045828.1 Influenza A virus (A/X-119(Puerto Rico/8/1934-Harbin/15/1992)(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY045567.1 Influenza A virus (A/swine/Oklahoma/008722/2007(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY043728.1 Influenza A virus (A/Siena/3/1991(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY039938.1 Influenza A virus (A/New York/537/1998(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY039880.1 Influenza A virus (A/New York/537/1998(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY039879.1 Influenza A virus (A/New York/537/1998(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY039878.1 Influenza A virus (A/New York/537/1998(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY041847.1 Influenza A virus (A/swine/North Carolina/R08-001877-D08-013371/2008 (H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
EU826551.2 Influenza A virus (A/mink/Nova Scotia/1055488/2007(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
CY036903.1 Influenza A virus (A/Shangdong/9/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY036831.1 Influenza A virus (A/Siena/1/1991(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY036807.1 Influenza A virus (A/X-117(Puerto Rico/8/1934-Beijing/32/1992)(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
EU697209.1 Influenza A virus (A/turkey/North Carolina/353568/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
CY035442.1 Influenza A virus (A/swine/Minnesota/SG-00242/2006(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY035422.1 Influenza A virus (A/swine/Minnesota/SG-00236/2007(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY035419.1 Influenza A virus (A/swine/Minnesota/SG-00235/2007(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY035416.1 Influenza A virus (A/swine/Minnesota/SG-00234/2005(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY035230.1 Influenza A virus (A/Siena/6/1991(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY035222.1 Influenza A virus (A/Siena/5/1991(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
EU857017.1 Influenza A virus (A/Hong Kong/CUHK4803/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU857016.1 Influenza A virus (A/Hong Kong/CUHK4622/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU857015.1 Influenza A virus (A/Hong Kong/CUHK4542/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU857014.1 Influenza A virus (A/Hong Kong/CUHK4529/1997(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU857012.1 Influenza A virus (A/Hong Kong/CUHK4391/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU857004.1 Influenza A virus (A/Hong Kong/CUHK4147/1997(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU856931.1 Influenza A virus (A/Hong Kong/CUHK22736/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU856920.1 Influenza A virus (A/Hong Kong/CUHK22013/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU856902.1 Influenza A virus (A/Hong Kong/CUHK20992/1997(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU856901.1 Influenza A virus (A/Hong Kong/CUHK20731/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU856899.1 Influenza A virus (A/Hong Kong/CUHK20320/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU856895.1 Influenza A virus (A/Hong Kong/CUHK20236/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU856894.1 Influenza A virus (A/Hong Kong/CUHK20217/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU856891.1 Influenza A virus (A/Hong Kong/CUHK20199/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU856888.1 Influenza A virus (A/Hong Kong/CUHK20010/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU856850.1 Influenza A virus (A/Hong Kong/CUHK12794/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU856849.1 Influenza A virus (A/Hong Kong/CUHK12626/1997(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU856846.1 Influenza A virus (A/Hong Kong/CUHK12566/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU856845.1 Influenza A virus (A/Hong Kong/CUHK12563/1997(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
CY033606.1 Influenza A virus (A/Beijing/32/1992(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
EU735818.1 Influenza A virus (A/turkey/OH/313053/2004(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU735826.1 Influenza A virus (A/turkey/NC/353568/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU422987.1 Influenza A virus (A/swine/Iowa/H02AS8/2002(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
CY020333.1 Influenza A virus (A/Memphis/3/1986(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY017299.1 Influenza A virus (A/New York/701/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY016483.1 Influenza A virus (A/New York/800/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY016060.1 Influenza A virus (A/Memphis/2/1986(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013789.1 Influenza A virus (A/New York/803/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013773.1 Influenza A virus (A/New York/801/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013765.1 Influenza A virus (A/New York/799/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013757.1 Influenza A virus (A/New York/798/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013749.1 Influenza A virus (A/New York/797/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013741.1 Influenza A virus (A/New York/795/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013725.1 Influenza A virus (A/New York/792/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013709.1 Influenza A virus (A/New York/790/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013677.1 Influenza A virus (A/New York/784/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013653.1 Influenza A virus (A/New York/774/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013629.1 Influenza A virus (A/New York/769/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY014151.1 Influenza A virus (A/New York/796/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY014143.1 Influenza A virus (A/New York/793/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013781.1 Influenza A virus (A/New York/802/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013733.1 Influenza A virus (A/New York/794/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013717.1 Influenza A virus (A/New York/791/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013701.1 Influenza A virus (A/New York/789/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013693.1 Influenza A virus (A/New York/788/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013685.1 Influenza A virus (A/New York/787/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013669.1 Influenza A virus (A/New York/780/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013661.1 Influenza A virus (A/New York/776/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013645.1 Influenza A virus (A/New York/773/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013637.1 Influenza A virus (A/New York/772/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013621.1 Influenza A virus (A/New York/768/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013613.1 Influenza A virus (A/New York/766/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013605.1 Influenza A virus (A/New York/757/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013319.1 Influenza A virus (A/New York/676/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013311.1 Influenza A virus (A/New York/660/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013208.1 Influenza A virus (A/New York/785/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013200.1 Influenza A virus (A/New York/783/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013192.1 Influenza A virus (A/New York/782/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013184.1 Influenza A virus (A/New York/781/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013176.1 Influenza A virus (A/New York/755/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY013168.1 Influenza A virus (A/New York/754/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012968.1 Influenza A virus (A/New York/735/1994(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012928.1 Influenza A virus (A/New York/699/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012784.1 Influenza A virus (A/New York/786/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012776.1 Influenza A virus (A/New York/779/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012768.1 Influenza A virus (A/New York/778/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012760.1 Influenza A virus (A/New York/777/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012752.1 Influenza A virus (A/New York/775/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012744.1 Influenza A virus (A/New York/771/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012736.1 Influenza A virus (A/New York/770/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012728.1 Influenza A virus (A/New York/767/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012528.1 Influenza A virus (A/New York/705/1994(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012520.1 Influenza A virus (A/New York/700/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012504.1 Influenza A virus (A/New York/678/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012496.1 Influenza A virus (A/New York/668/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
DQ469994.1 Influenza A virus (A/swine/Ontario/33853/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ469986.1 Influenza A virus (A/swine/Manitoba/12707/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ469970.1 Influenza A virus (A/swine/Alberta/14722/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ469962.1 Influenza A virus (A/Ontario/RV1273/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
CY012184.1 Influenza A virus (A/New York/765/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012176.1 Influenza A virus (A/New York/764/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012168.1 Influenza A virus (A/New York/763/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012160.1 Influenza A virus (A/New York/762/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012152.1 Influenza A virus (A/New York/761/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012144.1 Influenza A virus (A/New York/760/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012136.1 Influenza A virus (A/New York/759/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012128.1 Influenza A virus (A/New York/758/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY012120.1 Influenza A virus (A/New York/756/1993(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY011888.1 Influenza A virus (A/New York/716/1994(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY011840.1 Influenza A virus (A/New York/687/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY011552.1 Influenza A virus (A/New York/674/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY011536.1 Influenza A virus (A/New York/671/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY011512.1 Influenza A virus (A/New York/662/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY011472.1 Influenza A virus (A/Memphis/12/1985(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY011440.1 Influenza A virus (A/New York/632/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY011368.1 Influenza A virus (A/New York/703/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY011320.1 Influenza A virus (A/New York/692/1995(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY011288.1 Influenza A virus (A/Memphis/5/1986(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY011128.1 Influenza A virus (A/New York/599/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
DQ150425.1 Influenza A virus (A/swine/MI/PU243/04 (H3N1)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
AF251395.2 Influenza A virus (A/swine/Ontario/00130/97(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ145537.1 Influenza A virus (A/swine/Minnesota/00395/2004(H3N1)) hemagglutinin gene, complete cds 109 109 100% 1e-21 100%
DQ508833.1 Influenza A virus (A/Beijing/353/1989(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
CY010700.1 Influenza A virus (A/New York/625/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY010588.1 Influenza A virus (A/New York/572/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY010068.1 Influenza A virus (A/New York/600/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY010044.1 Influenza A virus (A/New York/594/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY010036.1 Influenza A virus (A/New York/592/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009740.1 Influenza A virus (A/New York/590/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009716.1 Influenza A virus (A/New York/587/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009692.1 Influenza A virus (A/New York/581/1997(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009676.1 Influenza A virus (A/New York/576/1997(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009668.1 Influenza A virus (A/New York/574/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009652.1 Influenza A virus (A/New York/566/1997(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009524.1 Influenza A virus (A/New York/583/1997(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009516.1 Influenza A virus (A/New York/579/1997(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009508.1 Influenza A virus (A/New York/575/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009476.1 Influenza A virus (A/New York/565/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009468.1 Influenza A virus (A/New York/564/1997(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009460.1 Influenza A virus (A/New York/560/1997(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009684.1 Influenza A virus (A/New York/580/1996(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY003752.2 Influenza A virus (A/Nanchang/0074/94(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY003712.1 Influenza A virus (A/Hong Kong/14/92(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY002752.1 Influenza A virus (A/Memphis/1/86(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY002272.1 Influenza A virus (A/Memphis/24/95(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009012.1 Influenza A virus (A/Nanchang/12/93(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY008668.1 Influenza A virus (A/Memphis/25/85(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY006331.2 Influenza A virus (A/Nanchang/A2/94(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
AY661073.1 Influenza A virus (A/Victoria/2/90(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661066.1 Influenza A virus (A/Beijing/353/89(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AF363504.1 Influenza A virus (A/Paris/908/97(H3N2)) hemagglutinin gene, complete cds 109 109 100% 1e-21 100%
AF363503.1 Influenza A virus (A/Paris/906/97(H3N2)) hemagglutinin gene, complete cds 109 109 100% 1e-21 100%
AF363502.1 Influenza A virus (A/Paris/896/97(H3N2)) hemagglutinin gene, complete cds 109 109 100% 1e-21 100%
CY007835.1 Influenza A virus (A/Nanchang/A1/94(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
DQ335771.1 Influenza A virus (A/turkey/Ohio/313053/04(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
AF268126.1 Influenza A virus (A/Swine/Wisconsin/14094/99(H3N2)) hemagglutinin protein gene, partial cds 109 109 100% 1e-21 100%
AF268125.1 Influenza A virus (A/Swine/Oklahoma/18089/99(H3N2)) hemagglutinin protein gene, partial cds 109 109 100% 1e-21 100%
AF268124.1 Influenza A virus (A/Swine/Illinois/21587/99(H3N2)) hemagglutinin protein gene, partial cds 109 109 100% 1e-21 100%
AF268123.1 Influenza A virus (A/Swine/Oklahoma/18717/99(H3N2)) hemagglutinin protein gene, partial cds 109 109 100% 1e-21 100%
CY006587.1 Influenza A virus (A/New York/541/1998(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY006475.1 Influenza A virus (A/New York/518/1998(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY006347.1 Influenza A virus (A/Nanchang/58/93(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY006339.1 Influenza A virus (A/Nanchang/0058/94(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
AB019357.1 Influenza A virus (A/Nagasaki/97/95(H3N2)) HA gene for hemagglutinin, complete cds 109 109 100% 1e-21 100%
AB019354.1 Influenza A virus (A/Nagasaki/48/95(H3N2)) HA gene for hemagglutinin, complete cds 109 109 100% 1e-21 100%
U97740.1 Influenza A virus (A/Beijing/353/89(H3)) hemagglutinin (HA) mRNA, complete cds 109 109 100% 1e-21 100%
U26830.1 Influenza A virus (A/Beijing/32/1992(H3N2)) hemagglutinin gene, complete cds 109 109 100% 1e-21 100%

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The above post CONFIRMS your membership in the flat earth society. Members use a very bad assay (looking for long examples of recombination) to genrate negative data, and then the negative data for long sequences is used to claim that shorter sequences are "lab error". Thus, (BAD) negative data is used to trump (GOOD) positive data to maintain the fantasy.

For those in the field, it is well known that human sequences in swine evolve more slowly. For the Korean swine, the acquired sequences are related to human H3 circulating in H3N2 swine. In Japan and Korea the size of the H3 swine database is much smaller than North America, reducing the liklihood of finding H3 in swine from 2002. That doesn't mean that the sequences in 2002 swine don't exist. It just means that they don't exist is a VERY small database.

However, the POSITIVE finding old matching sequences in 1993 swine is used to claim that the human data is lab error, rather than acknowledge the the human sequences in 1993 means that similar sequences will be found in 2002 swine (because the evolve slowly in swine), which could then act as a source for the 2002 infections and RECOMBINATION with seasonal H3N2 in 2002, as seen in SIX human isolates which were CONFIRMED by the CDC in Atlanta, and NIID in Japan which generated EXACT matches of the sequences generated by the CDC in Korea four years earlier. The CONFIRMED sequences were published in SCIENCE by scientists who publish using REAL NAMES in contrast to an anonymous poster with NO science background who makes proclamations and posts UTTER nonsense all over the internet claiming REAL DATA is lab error, coincidence, or BOTH.

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GISAID databse of H3 swine sequences in Japan

Name Isolate ID Subtype Passage PB2 PB1 PA HA NP NA MP NS HE P3 Submitter Collection date
A/swine/Nagano/2000 EPI_ISL_77634 H3N2 655 725 600 1709 505 470 915 827 --- --- , EpiFluDB 2000
A/swine/Obihiro/10/1985 EPI_ISL_68986 H3N2 542 738 631 1727 527 1414 921 798 --- --- , EpiFluDB 1985
A/SW/Obihiro/1/1994 EPI_ISL_8304 H3N2 --- --- --- 987 --- 1466 --- --- --- --- 1994
A/sw/Obihiro/3/1993 EPI_ISL_8299 H3N2 --- --- --- 987 --- --- --- --- --- --- 1993
A/sw/Obihiro/2/1993 EPI_ISL_8298 H3N2 --- --- --- 987 --- --- --- --- --- --- 1993
A/sw/Obihiro/1/1993 EPI_ISL_8297 H3N2 --- --- --- 987 --- --- --- --- --- --- 1993
A/swine/Wadayama/5/69 EPI_ISL_8147 H3N2 --- --- --- 987 --- --- --- --- --- --- 1969
A/swine/Shizuoka/120/97 EPI_ISL_1529 H3N2 2280 2274 2151 984 1497 1410 982 838 --- --- 1997
A/sw/Shizuoka/119/97 EPI_ISL_1528 H3N2 2280 2274 2151 984 1497 1410 982 838 --- --- 1997
A/sw/Shizuoka/115/97 EPI_ISL_1527 H3N2 2280 2274 2151 984 1497 1410 982 838 --- --- 1997
A/sw/Shizuoka/110/97 EPI_ISL_1526 H3N2 2280 2274 2151 984 1497 1410 982 838 --- --- 1997

and Korea
A/swine/Korea/CY10/2007 EPI_ISL_24590 H3N2 2280 2274 2151 1701 1515 1410 971 838 --- --- 2007
A/swine/Korea/CY09/2007 EPI_ISL_24589 H3N2 2280 2274 2151 1701 1515 1410 971 838 --- --- 2007
A/swine/Korea/CY07/2007 EPI_ISL_24588 H3N2 2280 2274 2151 1701 1515 1410 971 838 --- --- 2007
A/swine/Korea/CY05/2007 EPI_ISL_24587 H3N2 2280 2274 2151 1701 1515 1410 971 838 --- --- 2007
A/swine/Korea/CY04/2007 EPI_ISL_24586 H3N2 2280 2274 2151 1701 1515 1410 971 838 --- --- 2007
A/swine/Korea/CAS09/2006 EPI_ISL_24585 H3N2 2280 2274 2151 1701 1515 1410 971 838 --- --- 2006
A/swine/Korea/CAS07/2005 EPI_ISL_24584 H3N2 2280 2274 2151 1701 1515 1410 971 838 --- --- 2005
A/swine/Korea/CAN04/2005 EPI_ISL_24583 H3N2 2280 2274 2151 1701 1515 1410 971 838 --- --- 2005
A/swine/Korea/CAS05/2004 EPI_ISL_24582 H3N2 2280 2274 2151 1701 1515 1410 971 838 --- --- 2004
A/swine/Korea/GC0407/2005 EPI_ISL_20027 H3N2 --- --- --- 205 --- 457 --- --- --- --- 2005
A/swine/Korea/JNS06/2004 EPI_ISL_13928 H3N2 2280 2274 2151 1702 1515 1419 809 802 --- --- 2004
A/swine/Korea/CN22/2006 EPI_ISL_10547 H3N1 2280 2294 2178 1701 1498 1303 970 834 --- --- 2006
A/swine/Korea/PZ72-1/2006 EPI_ISL_10546 H3N1 2288 2294 2178 1701 1498 1413 970 834 --- --- 2006

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GISAID H3 swine sequences in North America

A/swine/North Carolina/A01049436/2011 EPI_ISL_93364 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2011-01-19
A/swine/Minnesota/A01049346/2010 EPI_ISL_93359 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-12-29
A/swine/Iowa/A01049317/2010 EPI_ISL_93358 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-12-22
A/swine/Pennsylvania/A01049256/2010 EPI_ISL_93357 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-12-07
A/swine/Iowa/A01049254/2010 EPI_ISL_93356 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-12-09
A/swine/Nebraska/A01049235/2010 EPI_ISL_93351 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-12-07
A/swine/Iowa/A01049185/2010 EPI_ISL_90371 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-12-01
A/swine/Iowa/A01049160/2010 EPI_ISL_90366 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-11-30
A/swine/Indiana/A01049124/2010 EPI_ISL_90362 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-11-19
A/swine/Iowa/A01049113/2010 EPI_ISL_90360 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-11-22
A/swine/Iowa/A0109112/2010 EPI_ISL_90126 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-11-22
A/swine/Indiana/A0109091/2010 EPI_ISL_90122 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-11-18
A/swine/Iowa/A0109035/2010 EPI_ISL_90103 H3N2 --- --- --- 1701 --- 1410 979 --- --- --- , EpiFluDB 2010-11-16
A/swine/Iowa/A0109034/2010 EPI_ISL_90102 H3N2 --- --- --- 1701 --- 1410 979 --- --- --- , EpiFluDB 2010-11-16
A/swine/Iowa/A0109032/2010 EPI_ISL_90101 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-11-16
A/swine/Iowa/A0109031/2010 EPI_ISL_90100 H3N2 --- --- --- 1701 --- 1410 982 --- --- --- , EpiFluDB 2010-11-16
A/swine/Pennsylvania/602170-3/2010 EPI_ISL_89372 H3N2 --- --- --- --- --- 1410 --- --- --- --- , EpiFluDB 2010-10-25
A/swine/Pennsylvania/602170-1/2010 EPI_ISL_89371 H3N2 --- --- --- --- --- 1410 --- --- --- --- , EpiFluDB 2010-10-25
A/swine/Pennsylvania/602170-4/2010 EPI_ISL_89370 H3N2 --- --- --- 1711 --- 1410 --- --- --- --- , EpiFluDB 2010-10-25
A/swine/Pennsylvania/602170-2/2010 EPI_ISL_89369 H3N2 --- --- --- 1701 --- 1410 --- --- --- --- , EpiFluDB 2010-10-25
A/swine/QC/440-A/2009 EPI_ISL_89334 H3N2 MDCK cells 2280 2274 2209 1733 1538 1410 1002 864 --- --- , EpiFluDB 2009-05-29
A/swine/QC/1840-2/2009 EPI_ISL_89333 H3N2 MDCK cells 2280 2274 2209 1733 1538 1447 1002 864 --- --- , EpiFluDB 2009-05-28
A/swine/QC/414/2009 EPI_ISL_89332 H3N2 MDCK cells 2280 2274 2209 1733 1538 1447 1002 864 --- --- , EpiFluDB 2009-05-22
A/swine/QC/1698-5/2009 EPI_ISL_89331 H3N2 MDCK cells --- --- --- 1733 --- 1410 1002 --- --- --- , EpiFluDB 2009-05-15
A/swine/QC/1698-4/2009 EPI_ISL_89330 H3N2 MDCK cells --- --- --- 1701 --- 1410 1002 --- --- --- , EpiFluDB 2009-05-15
A/swine/QC/1698-2/2009 EPI_ISL_89329 H3N2 MDCK cells --- --- --- 1733 --- 1447 1002 --- --- --- , EpiFluDB 2009-05-15
A/swine//1685-1/2009 EPI_ISL_89328 H3N2 MDCK cells --- --- --- 1733 1538 1447 1002 --- --- --- , EpiFluDB 2009-05-15
.
.
.
A/Swine/Wisconsin/14094/99 EPI_ISL_1749 H3N2 498 483 501 1412 563 1387 322 511 --- --- 1999
A/Swine/Oklahoma/18089/99 EPI_ISL_1748 H3N2 496 483 477 1423 561 1394 322 511 --- --- 1999
A/Swine/Illinois/21587/99 EPI_ISL_1747 H3N2 475 487 504 1421 550 1397 323 507 --- --- 1999
A/Swine/Oklahoma/18717/99 EPI_ISL_1746 H3N2 474 494 471 1430 540 1402 322 511 --- --- 1999
A/Swine/Minnesota/593/99 EPI_ISL_1719 H3N2 2335 2275 2151 1702 1565 1410 1012 845 --- --- 1999
A/Swine/Iowa/569/99 EPI_ISL_1718 H3N2 2335 2275 2151 1703 1565 1410 975 845 --- --- 1999
A/Swine/Iowa/533/99 EPI_ISL_1717 H3N2 2335 2275 2151 1702 1565 1410 986 846 --- --- 1999
A/Swine/Nebraska/209/98 EPI_ISL_1716 H3N2 2335 2275 2151 1702 1565 1410 996 847 --- --- 1998
A/swine/Ontario/00130/97 EPI_ISL_1715 H3N2 2311 2278 2151 1731 1531 1411 986 841 --- --- 1997
A/Swine/Colorado/1/77 EPI_ISL_1714 H3N2 2306 2309 2199 1765 1565 1427 989 890 --- --- 1977
A/Swine/Iowa/8548-1/98 EPI_ISL_1262 H3N2 1557 1149 596 1276 991 1386 964 845 --- --- 1998
A/Swine/Minnesota/9088-2/98 EPI_ISL_1261 H3N2 1557 1149 596 1342 991 1386 964 845 --- --- 1998
A/Swine/Texas/4199-2/98 EPI_ISL_1260 H3N2 1557 1149 596 1317 991 1386 964 845 --- --- 1998
A/Swine/North Carolina/35922/98 EPI_ISL_1259 H3N2 1557 1149 596 1229 991 1386 913 845 --- --- 1998
Loading data...

Total: 176 isolates

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Note that the number of H3 swine sequences at GISAID from Japan and Korea in 2002 is ZERO

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Nine more

FJ769856.1 Influenza A virus (A/Boshehr/388/2006(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU430047.1 Influenza A virus (A/Shiraz/02/2006(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
EU430044.1 Influenza A virus (A/Shiraz/05/2006(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
EU430043.1 Influenza A virus (A/Shiraz/29/2006(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
EU430042.1 Influenza A virus (A/Shiraz/37/2006(H3N2)) nonfunctional hemagglutinin gene, partial sequence 109 109 100% 1e-21 100%
EU430041.1 Influenza A virus (A/Shiraz/54/2006(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
EU430040.1 Influenza A virus (A/Shiraz/13/2006(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
EU311407.1 Influenza A virus (A/Tehran/27/2006(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU311405.1 Influenza A virus (A/Tehran/16/2006(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%

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diverting.

60bp is not so much, why should I even look at it ?
Is there a paper, a summary ?

your Tennessee/25 is now in China - coincidence ?

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no patents on genes, publish the GISAID sequences !

2006 isolates with sequences from the early 1990's.

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Only "surprising" to "flat earthers".

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