Rhiza Labs FluTracker Forum

Regions of identity between canine and feline H3N2 collected years apart

361 TGGTTAACTAAGTCAGGAAATACATATCCAGTGTTGAATGTGACTATGCCAAACAATAAC 420
CY090035 505 ............................................................ 564
EU127500 505 ............................................................ 564
GU433345 505 ............................................................ 564
JN247595 505 ............................................................ 564
JN247587 505 ............................................................ 564
HQ316191 505 ............................................................ 564
GU433361 505 ............................................................ 564
GU122024 457 ............................................................ 516
GU433369 505 ............................................................ 564
JN247619 505 ............................................................ 564
JN247603 505 ............................................................ 564
JN247579 505 ............................................................ 564
GU433353 505 ............................................................ 564
JN247611 505 ............................................................ 564
JN087096 505 ...........A.........G..........A........................G.. 564
JN087088 487 ...........A.........G..........A........................G.. 546
EU301215 505 ...........A.........G..........A........................G.. 564
JN087184 509 ...........A.........G..........A........................G.. 568
JN087112 481 ...........A.........G..........A........................G.. 540
HQ143740 457 ...........A.........G..........A........................G.. 516
JN087020 496 .....................G................C..................G.. 555
AY862612 505 .....................G................C..................G.. 564
AY862607 505 .....................G................C..................G.. 564
AY862609 505 .....................G................C..................G.. 564
AY862608 505 .....................G................C..................G.. 564
JN087224 498 ...........A.........G..........A..A.....................G.. 557
AY862610 505 .....................G................C..................G.. 564
GU122029 457 .....................G..........A.....C..................G.. 516
AY862611 505 .....................G................C..................G.. 564
JN087104 505 .....G...............G...................................G.. 564
HQ143739 457 .....G...............G...................................G.. 516
EU301240 505 .....G...............G................C..................G.. 564
EU301230 505 .....G...............G................C..................G.. 564
EU301229 505 .....G...............G................C..................G.. 564
EU301228 505 .....G...............G................C..................G.. 564
EU301236 505 .....G...............G................C..................G.. 564
EU301235 505 .....G...............G................C..................G.. 564
EU301233 505 .....G...............G................C..................G.. 564
GU122026 457 .....G...............G................C..................G.. 516
EU301239 505 .....G...............G................C..................G.. 564
EU301234 505 .....G...............G................C..................G.. 564
EU301222 505 .....................G........C.......C..................G.. 564
JN087272 487 .....G...............G...................................G.T 546
JN087264 492 .....G...............G...................................G.. 551
JN087256 487 .....G...............G...................................G.T 546
JN087248 491 .....G...............G...................................G.. 550
JN087240 492 .....G...............G...................................G.T 551
JN087128 510 .....................G..........A.....C..................G.. 569
HQ143742 457 .....................G..........A.....C..................G.. 516
JN087232 491 .....G...............G...................................G.. 550
JN087176 508 .....G...............G................C..................G.. 567
JN087152 501 .....................G..........A.....C..................G.. 560
GU122027 457 .....G...............G................C..................G.. 516
EU301238 505 .....G...............G................C..................G.. 564
EU301223 505 .....................G........C.......C..................G.. 564
EU301221 505 .....................G........C.......C..................G.. 564
JN087280 493 .....G...............G...................................G.. 552
JN087136 504 .....G...............G................C..................G.. 563
GU122025 457 .....G...............G...................................G.. 516
EU301225 505 ...........A.........G........C.......C..................G.. 564
EU301224 505 ...........A.........G........C.......C..................G.. 564
GU122023 457 ...........A........CG................C.....C............G.. 516
EU301227 505 ...........A.........G........C.......C..................G.. 564
EU912502 505 ...............A..G..G.............A..C..................G.. 564
EU301237 505 ...........A.........G........ACA........A...............G.. 564
EU301231 505 ...........A.........G........C....A..C..................G.. 564
EU301226 505 ...........A.........G........C.......C..................G.. 564
EU912503 505 ...............A.....G.............A..C....T.............G.. 564
EU301232 505 ...........A.........G........C....A..C..................G.. 564
GU122022 457 ...........A........CG................C.....C............G.. 516
JN087168 508 ...........A........CG................C.....C...........CG.. 567
JN087296 509 ........C..A........CG......................C............G.. 568
JN087120 494 ........C..A.........G......................C............G.. 553
HQ143741 457 ........C..A.........G......................C............G.. 516
JN087288 494 ........C..A........CG......................C............G.. 553
JN087216 495 ........C..A.........G......................C............G.. 554
JN087200 505 ........C..A.........G......................C............G.. 564
JN087160 509 ........C..A.........G......................C............G.T 568
JN087208 475 ........C..A.........G......................C............G.. 534
JN087192 509 ........C..A.........G......................C............G.. 568
GU122028 457 ........C..A........CG......................C............G.. 516
AB537465 505 .....G..............CG....C...........C..................G.. 564
AB537460 505 .....G..............CG....C...........C..................G.. 564
AB537458 505 .....G..............CG....C...........C..................G.. 564
AB537455 505 .....G..............CG....C...........C..................G.. 564
GU143859 442 .....G..............CG................C.....C............G.. 501
GU143860 442 .....G..............CG................C.....C............G.. 501
GU122030 457 .....G..............CG................C.....C............G.. 516
AB537467 505 .....G..............CG....C...........C..................G.. 564
AB537461 505 .....G..............CG....C...........C..................G.. 564
AB537459 505 .....G..............CG....C...........C..................G.. 564
AB537457 505 .....G..............CG....C...........C..................G.. 564
AB537454 505 .....G..............CG....C...........C..................G.. 564
JN087064 415 .....G..............CG....C...........C..................G.. 474
AB537474 505 .....G..............CG....C...........C..................G.. 564
AB537462 505 .....G..............CG....C...........C..................G.. 564
AB537456 505 .....G..............CG....C...........C..................G.. 564
AJ427297 505 .....G..............CG................C..................G.. 564
JN087352 468 .....G..............CG....C...........C..................G.. 527
AB537477 505 .....G..............CG....C...........C..................G.. 564

Query 421 AATTTCGACAAATTATACATTTGGGGAGTTCATCACCCAAGCACTAATCAAGAACAAACC 480
CY090035 565 ............................................................ 624
EU127500 565 ............................................................ 624
GU433345 565 ..........................G................................. 624
JN247595 565 ............................................................ 624
JN247587 565 ............................................................ 624
HQ316191 565 ............................................................ 624
GU433361 565 ............................................................ 624
GU122024 517 ............................................................ 576
GU433369 565 ............................................................ 624
JN247619 565 ............................................................ 624
JN247603 565 ............................................................ 624
JN247579 565 ..........................G................................. 624
GU433353 565 ............................................................ 624
JN247611 565 ............................................................ 624
JN087096 565 ..........................G................................. 624
JN087088 547 ..........................G................................. 606
EU301215 565 ..........................G................................. 624
JN087184 569 ..............G............................................. 628
JN087112 541 ..........................G................................. 600
HQ143740 517 ..........................G................................. 576
JN087020 556 ................................C........................... 615
AY862612 565 ..........................G.....C........................... 624
AY862607 565 ..........................G.....C........................... 624
AY862609 565 ..........................G.....C........................... 624
AY862608 565 ..........................G.....C........................... 624
JN087224 558 ..........................G................................. 617
AY862610 565 ..........................G.....C........................... 624
GU122029 517 ................................C..........................T 576
AY862611 565 ..........................G.....C........................... 624
JN087104 565 ..........................G.....C..T........................ 624
HQ143739 517 ..........................G.....C..T........................ 576
EU301240 565 ..........................G.....C..T........................ 624
EU301230 565 ..........................G.....C..T........................ 624
EU301229 565 ..........................G.....C..T........................ 624
EU301228 565 ..........................G.....C..T........................ 624
EU301236 565 ..........................G.....C..T........................ 624
EU301235 565 ..........................G.....C..T........................ 624
EU301233 565 ..........................G.....C..T........................ 624
GU122026 517 ..........................G........T........................ 576
EU301239 565 ..........................G.....C..T........................ 624
EU301234 565 ..........................G.....C..T........................ 624
EU301222 565 ..........................G..C..C........................... 624
JN087272 547 ..........................G.....C..T........................ 606
JN087264 552 ..........................G.....C..T........................ 611
JN087256 547 ..........................G.....C..T........................ 606
JN087248 551 ..........................G.....C..T........................ 610
JN087240 552 ..........................G.....C..T........................ 611
JN087128 570 ................................C........................... 629
HQ143742 517 ................................C........................... 576
JN087232 551 ..........................G.....C..T........................ 610
JN087176 568 ..........................G.....C..T...........C............ 627
JN087152 561 ................................C........................... 620
GU122027 517 ..........................G........T........................ 576
EU301238 565 .....................G....G........T........................ 624
EU301223 565 ..........................G..C..C........................... 624
EU301221 565 ..........................G..C..C........................... 624
JN087280 553 ..........................G.....C..T........................ 612
JN087136 564 ..........................G........T........................ 623
GU122025 517 ..........................G.....C..T........................ 576
EU301225 565 ..........................G..C..C........................... 624
EU301224 565 ..........................G..C..C........................... 624
GU122023 517 ..........................G.....C........................... 576
EU301227 565 ..........................G..C..C...........C............... 624
EU912502 565 ..........................G.....C........................... 624
EU301237 565 ..........................G.....C........................... 624
EU301231 565 ..........................G..C..C...........C............... 624
EU301226 565 ..........................G..C..C...........C............... 624
EU912503 565 .......C..................G.....C........................... 624
EU301232 565 ..........................G..C..C...........C............... 624
GU122022 517 .....T....................G.....C........................... 576
JN087168 568 ..........................G.....C........................... 627
JN087296 569 ..........................G................................. 628
JN087120 554 ..C........G..............G................................. 613
HQ143741 517 ..C........G..............G................................. 576
JN087288 554 ..........................G.....C........................... 613
JN087216 555 ..C........G..............G.............................G... 614
JN087200 565 ..C........G..............G.............................G... 624
JN087160 569 ..C.......................G.....C........................... 628
JN087208 535 ..C........G..............G.............................G... 594
JN087192 569 ..C........G..............G.............................G... 628
GU122028 517 ..............G...........G.....C........................... 576
AB537465 565 .....T......C.......C.................G.....A............... 624
AB537460 565 .....T......C.......C.................G.....A............... 624
AB537458 565 .....T......C.......C.................G.....A............... 624
AB537455 565 .....T......C.......C.................G.....A............... 624
GU143859 502 .....T......C.......C.......................A............... 561
GU143860 502 .....T......C.......C.......................A............... 561
GU122030 517 ..C..T......C.......C.................G.....A............... 576
AB537467 565 .....T......C.......C.................G.....A............... 624
AB537461 565 .....T......C.......C.................G.....A............... 624
AB537459 565 .....T......C.......C.................G.....A............... 624
AB537457 565 .....T......C.......C.................G.....A............... 624
AB537454 565 .....T......C.......C.................G.....A............... 624
JN087064 475 .....T......C.......C.................G.....A............... 534
AB537474 565 .....T......C.......C.................G.....A............... 624
AB537462 565 .....T......C.......C.................G.....A............... 624
AB537456 565 .....T......C.......C.................G.....A............... 624
AJ427297 565 .....T......C.......C...........C.....G.....A............... 624
JN087352 528 .....T..T...C.......C.................G.....A............... 587
AB537477 565 .....T......C.......C.................G.....A............... 624

Query 481 AGCCTGTATATTCAGGCCTCAGGAAGAGTCACAGTCTCTACCAGGAGAAGCCAACAGACC 540
CY090035 625 .....................................T...................... 684
EU127500 625 ............................................................ 684
GU433345 625 ............................................................ 684
JN247595 625 ............................................................ 684
JN247587 625 ............................................................ 684
HQ316191 625 ............................................................ 684
GU433361 625 .........................................................G.. 684
GU122024 577 ............................................................ 636
GU433369 625 .........................................................G.. 684
JN247619 625 ...................................................A........ 684
JN247603 625 ..........................................G................. 684
JN247579 625 ............................................................ 684
GU433353 625 ............................................................ 684
JN247611 625 ..........................................G................. 684
JN087096 625 ................................G........................... 684
JN087088 607 ................................G...............G........... 666
EU301215 625 ................................G...............G........... 684
JN087184 629 ........C.......................G........................... 688
JN087112 601 ..............A.................G........................... 660
HQ143740 577 ..............A.................G........................... 636
JN087020 616 .........G......................G........................... 675
AY862612 625 .C.......G......................G........................... 684
AY862607 625 .C.......G......................G........................... 684
AY862609 625 .C.......G......................G........................... 684
AY862608 625 .C.......G......................G........................... 684
JN087224 618 ..............A.................G........................... 677
AY862610 625 .C.......G......................G........................... 684
GU122029 577 .A..............................G........................... 636
AY862611 625 .........G......................G........................... 684
JN087104 625 .A.......G.......T..............G.................T......... 684
HQ143739 577 .A.......G.......T..............G.................T......... 636
EU301240 625 .........G.......T..............G.................T......... 684
EU301230 625 .........G.......T..............G.................T......... 684
EU301229 625 .........G.......T..............G.................T......... 684
EU301228 625 .........G.......T..............G.................T......... 684
EU301236 625 .........G.......T..............G.................T......... 684
EU301235 625 .........G.......T..............G.................T......... 684
EU301233 625 .........G.......T..............G.................T......... 684
GU122026 577 .........G.......T..............G.................T......... 636
EU301239 625 .........G.......T..............G.................T......... 684
EU301234 625 .........G.......T..............G.................T......... 684
EU301222 625 .........G......................G........................... 684
JN087272 607 .A.......G.......T..............T.................T......... 666
JN087264 612 .A.......G.......T..............T.................T......... 671
JN087256 607 .A.......G.......T..............T.................T......... 666
JN087248 611 .A.......G.......T..............T.................T......... 670
JN087240 612 .A.......G.......T..............T.................T......... 671
JN087128 630 .A................C.......G.................A.....T......... 689
HQ143742 577 .A................C.......G.................A.....T......... 636
JN087232 611 .A.......G.......T..............T.................T......... 670
JN087176 628 .........G.......T.........A....G.................T......... 687
JN087152 621 .A........................G.................A.....T..G...... 680
GU122027 577 .........G.......T..............G.................T......... 636
EU301238 625 .........G.......T..............G.................T......... 684
EU301223 625 .........G......T...............G........................... 684
EU301221 625 .........G......................G........................... 684
JN087280 613 .AG......G.......T..............G.................T......... 672
JN087136 624 .........G.......T..............G.............A...T......... 683
GU122025 577 .A.......G.......T..............G........................... 636
EU301225 625 .........G......................G........................... 684
EU301224 625 .........G......................G........................... 684
GU122023 577 .........G................G.....G.................T......... 636
EU301227 625 .........G......................G........................... 684
EU912502 625 .........G.....A................G........T..A............... 684
EU301237 625 .........G.............G........G........T.................. 684
EU301231 625 .........G......................G........................... 684
EU301226 625 .........G......................G........................... 684
EU912503 625 .........G.....A................G........T..A............... 684
EU301232 625 .........G......................G........................... 684
GU122022 577 .........G................G.....G.................T......... 636
JN087168 628 .........G.......A........G.....G.................T......... 687
JN087296 629 .........G.............G..G.............................A... 688
JN087120 614 .........G......................G.....C..................... 673
HQ143741 577 .........G......................G.....C..................... 636
JN087288 614 .........G.............G..G.............................A... 673
JN087216 615 .........G......................G.....C.....A............... 674
JN087200 625 .........G......................G.....C.....A............... 684
JN087160 629 .........G......................G........................... 688
JN087208 595 .........G......................G.....C.....A............... 654
JN087192 629 .........G......................G.....C.....A............... 688
GU122028 577 .........G.............G................................A... 636
AB537465 625 .........G....A.......................C....................T 684
AB537460 625 .A.......G....A.......................C....................T 684
AB537458 625 .A.......G....A.......................C....................T 684
AB537455 625 .A.......G....A.......................C....................T 684
GU143859 562 .A.......G....A.......................C..T...........G.....T 621
GU143860 562 .A.......G....A.......................C..T...........G.....T 621
GU122030 577 .A.......G....A.......................C....................T 636
AB537467 625 .A.......G....A.......................C....................T 684
AB537461 625 .A.......G....A.......................C....................T 684
AB537459 625 .A.......G....A.......................C....................T 684
AB537457 625 .A.......G....A.......................C....................T 684
AB537454 625 .A.......G....A.......................C....................T 684
JN087064 535 .A.......G....A.......................C....................T 594
AB537474 625 .A.......G....A....................T..C....................T 684
AB537462 625 .A.......G....A.......................C....................T 684
AB537456 625 .A.......G....A.......................C....................T 684
AJ427297 625 .AT......G....A.......................C....................T 684
JN087352 588 .A.......G....A.......................C....................T 647
AB537477 625 .A.......G....A....................T..C....................T 684

Query 541 ATAATCCCAAACATTGGATCTAGACCCTTGGTAAGGGGCCAATCTGGCAGAATAAGCGTA 600
CY090035 685 ............................................................ 744
EU127500 685 ............................................................ 744
GU433345 685 ............................................................ 744
JN247595 685 ............................................................ 744
JN247587 685 ............................................................ 744
HQ316191 685 ............................................................ 744
GU433361 685 ............................................................ 744
GU122024 637 .............................A.............................. 696
GU433369 685 ............................................................ 744
JN247619 685 ............................................................ 744
JN247603 685 ............................................................ 744
JN247579 685 ............................................................ 744
GU433353 685 ............................................................ 744
JN247611 685 ............................................................ 744
JN087096 685 ............................G............G.................. 744
JN087088 667 ............................G............G.................. 726
EU301215 685 ............................G............G.................. 744
JN087184 689 ............................G............G.................. 748
JN087112 661 ....................C.......G............G.................. 720
HQ143740 637 ....................C.......G............G.................. 696
JN087020 676 ............................G............G.................. 735
AY862612 685 .........................................G.................. 744
AY862607 685 .........................................G.................. 744
AY862609 685 .........................................G.................. 744
AY862608 685 .........................................G.................. 744
JN087224 678 ....................C.......G............G.................. 737
AY862610 685 .........................................G.................. 744
GU122029 637 .........................................G.................. 696
AY862611 685 ............................G............G.................. 744
JN087104 685 ...........T................G............G...............A.. 744
HQ143739 637 ...........T................G............G...............A.. 696
EU301240 685 .................G..........G............G.................. 744
EU301230 685 ............................G............G.................. 744
EU301229 685 ............................G............G.................. 744
EU301228 685 ............................G............G.................. 744
EU301236 685 ...........T................G............G.................. 744
EU301235 685 ...........T................G............G.................. 744
EU301233 685 ...........T................G............G.................. 744
GU122026 637 ............................G............G.................. 696
EU301239 685 .................G..........G............G.................. 744
EU301234 685 ........G..T................G............G.................. 744
EU301222 685 ............................G............G.................. 744
JN087272 667 ...........T................G......A.....G...............A.. 726
JN087264 672 ...........T........C.......G......A.....G...............A.. 731
JN087256 667 ...........T................G......A.....G...............A.. 726
JN087248 671 ...........T........C.......G......A.....G...............A.. 730
JN087240 672 ...........T................G......A.....G...............A.. 731
JN087128 690 ............................G............G.................. 749
HQ143742 637 ............................G............G.................. 696
JN087232 671 ...........T........C.......G......A.....G...............A.. 730
JN087176 688 .......................G....G............G...............A.. 747
JN087152 681 ............................G............G.................. 740
GU122027 637 ............................G............G.................. 696
EU301238 685 ............................G............G...............A.. 744
EU301223 685 ............................G............G.................. 744
EU301221 685 ............................G............G.................. 744
JN087280 673 ...........T................G............G...............A.. 732
JN087136 684 ............................G............G.................. 743
GU122025 637 ...........T................G............G...............A.. 696
EU301225 685 ............................G............G.................. 744
EU301224 685 ............................G............G.................. 744
GU122023 637 ........G...................G...G........G.................. 696
EU301227 685 ............................G............G.................. 744
EU912502 685 ............................G...G........................... 744
EU301237 685 ............................G............G.................. 744
EU301231 685 ............................G............G.................. 744
EU301226 685 ............................G............G.................. 744
EU912503 685 ............................G...G........................... 744
EU301232 685 ............................G............G.................. 744
GU122022 637 ........G...................G...G........G.................. 696
JN087168 688 ........G...................G...G........G.................. 747
JN087296 689 ........G...................G...G........G..............T... 748
JN087120 674 ...G.............G..C.......G............G..C..............G 733
HQ143741 637 ...G.............G..C.......G............G..C..............G 696
JN087288 674 ........G...................G...G........G..............T... 733
JN087216 675 ...G.............G..C.......G............G..C..............G 734
JN087200 685 ...G.............G..C.......G............G..C..............G 744
JN087160 689 ...G................C.......G............G..C..............G 748
JN087208 655 ...G.............G..C.......G............G..C..............G 714
JN087192 689 ...G.............G..C.......G............G..C..............G 748
GU122028 637 ........G...................G...G........G..............T... 696
AB537465 685 ........G...................G............G...............A.C 744
AB537460 685 ........G...................G............G...............A.C 744
AB537458 685 ........G...................G............G...............A.C 744
AB537455 685 ........G...................G............G...............A.C 744
GU143859 622 ........G...................G............G...............A.C 681
GU143860 622 ........G...................G............G...............A.C 681
GU122030 637 ........G...................G............G...............A.C 696
AB537467 685 ........G...................G............G...............A.C 744
AB537461 685 ........G...................G............G...............A.C 744
AB537459 685 ........G...................G............G...............A.C 744
AB537457 685 ........G...................G............G...............A.C 744
AB537454 685 ........G...................G............G...............A.C 744
JN087064 595 ........G...................G............G...............A.C 654
AB537474 685 ........G...................G............G...............A.C 744
AB537462 685 ........G...................G............G...............A.C 744
AB537456 685 ........G...................G............G...............A.C 744
AJ427297 685 .....T..G...................G......A.....G...............A.C 744
JN087352 648 ........G...................G............G...............A.C 707
AB537477 685 ........G...................G............G...............A.C 744

Query 601 TATTGGACAATAGTCAAACCTGGAGACGTACTGGTAATAAACAGTAATGGAAACCTAATC 660
CY090035 745 ............................................................ 804
EU127500 745 ............................................................ 804
GU433345 745 ............................................................ 804
JN247595 745 ..........C................................................. 804
JN247587 745 ..........C................................................. 804
HQ316191 745 ............................................................ 804
GU433361 745 ............................................................ 804
GU122024 697 ............................................................ 756
GU433369 745 ............................................................ 804
JN247619 745 ............................................................ 804
JN247603 745 ..........C................................................. 804
JN247579 745 ..........C................................................. 804
GU433353 745 ............................................................ 804
JN247611 745 ..........C................................................. 804
JN087096 745 .......................G......T............................. 804
JN087088 727 .......................G......T............................. 786
EU301215 745 .......................G......T............................. 804
JN087184 749 .......................G......T............................. 808
JN087112 721 .......................G......T............................. 780
HQ143740 697 .......................G......T............................. 756
JN087020 736 .........G............................C..................... 795
AY862612 745 .........G.............G..............C..................... 804
AY862607 745 .........G.............G..............C..................... 804
AY862609 745 .........G.............G..............C..................... 804
AY862608 745 .........G.............G..............C..................... 804
JN087224 738 .......................G......T..A.............C............ 797
AY862610 745 .........G.............G..............C..................... 804
GU122029 697 .........G.............G..............C..................... 756
AY862611 745 .........G.............G..............C..................... 804
JN087104 745 .........G............................C..............T...... 804
HQ143739 697 .........G............................C..............T...... 756
EU301240 745 .........G............................C..................... 804
EU301230 745 .........G...................G........C..................... 804
EU301229 745 .........G...................G........C..................... 804
EU301228 745 .........G............................C..................... 804
EU301236 745 .........G............................C..................... 804
EU301235 745 .........G............................C..................... 804
EU301233 745 .........G............................C..................... 804
GU122026 697 .........G.............G..............C..................... 756
EU301239 745 .........G............................C..................... 804
EU301234 745 .........G............................C..................... 804
EU301222 745 .........G....T........G..............C...........G......... 804
JN087272 727 .........G............................C..............T...... 786
JN087264 732 .........G............................C..............T...... 791
JN087256 727 .........G............................C..............T...... 786
JN087248 731 .........G............................C..............T...... 790
JN087240 732 .........G............................C..............T...... 791
JN087128 750 .........G................T...T.......C..................... 809
HQ143742 697 .........G................T...T.......C..................... 756
JN087232 731 .........G............................C..............T...... 790
JN087176 748 .........G.................A..........C..................... 807
JN087152 741 .........G................T...T.......C..............T...... 800
GU122027 697 .........G.........................T..C..............T...... 756
EU301238 745 .........G.........................T..C..................... 804
EU301223 745 .........G....T........G..............C...........G......... 804
EU301221 745 .........G....T........G..............C...........G......... 804
JN087280 733 .........G................T...........C..............T...... 792
JN087136 744 .........G.........................T..C..............T...... 803
GU122025 697 .........G................T...........C..............T...... 756
EU301225 745 .........G....T........G..............C...........G......... 804
EU301224 745 .........G....T........G..............C...........G......... 804
GU122023 697 .........G.G...........G..............C..................... 756
EU301227 745 .........G....T........G..............C...........G......... 804
EU912502 745 .......................G..............T..................... 804
EU301237 745 .........G....T........G..............C...........G......... 804
EU301231 745 .........G....T........G..............C...........G......... 804
EU301226 745 .........G....T........G..............C...........G......... 804
EU912503 745 .......................G..............T..................... 804
EU301232 745 .........G....T........G..............C...........G......... 804
GU122022 697 .........G.G...........G.....G........C.....C..............T 756
JN087168 748 .........G.G...........G.....G........C.....C..............T 807
JN087296 749 .........G.............G.....G........C.....C..............T 808
JN087120 734 ........TG............................C........C..G......... 793
HQ143741 697 ........TG............................C........C..G......... 756
JN087288 734 .........G.............G.....G........C.....C..............T 793
JN087216 735 ........TG............................C........C..G......... 794
JN087200 745 ........TG............................C........C..G......... 804
JN087160 749 ........TG............................C........C..G......... 808
JN087208 715 ........TG............................C........C..G......... 774
JN087192 749 ........TG............................C........C..G......... 808
GU122028 697 .........G.G...........G.G...G........C.....C..............T 756
AB537465 745 ........G..............G..............C..T.................. 804
AB537460 745 ........G..............G..............C..T.................. 804
AB537458 745 ........G..............G..............C..T.................. 804
AB537455 745 ........G..............G..............C..T.................. 804
GU143859 682 ........G..............G..............C..T.................. 741
GU143860 682 ........G..............G..............C..T.................. 741
GU122030 697 ........G..............G..T...........C..T.................. 756
AB537467 745 ........G..............G..............C..T.................. 804
AB537461 745 ........G..............G..............C..T.................. 804
AB537459 745 ........G..............G..............C..T.................. 804
AB537457 745 ........G..............G..............C..T.................. 804
AB537454 745 ........G..............G..............C..T.................. 804
JN087064 655 ........G...........C..G..............C..T.................. 714
AB537474 745 ........G..............G..............C..T.................. 804
AB537462 745 ........G..............G..............C..T.................. 804
AB537456 745 ........G..............G..............C..T.................. 804
AJ427297 745 .......................G..............C..T.................. 804
JN087352 708 ........G..............G..............C..T.................. 767
AB537477 745 ........G..............G..............C..T.................. 804

_________________
www.twitter.com/hniman

yes, but in the context of lack thereof :
http://jvi.asm.org/cgi/content/abstract/JVI.02207-07v1

(as with recombination in human flu)

_________________
no patents on genes, publish the GISAID sequences !

Please. That paper on acquatic ice was utter nonsense, as I commented as soon as it was published (and LONG before the above paper was published).

_________________
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Several additional cases with findings that seem at odds with the biology of influenza virus – including modern-looking avian influenza virus RNA sequences from an archival goose specimen collected in 1917 [J. Virol. 76:7860-7862] – can also be explained by laboratory contamination or other experimental errors. Many putative examples of evolutionary stasis in influenza A virus appear to be due to laboratory artifacts.



This article has been cited by other articles:

Shapiro, B., Ho, S. Y. W., Drummond, A. J., Suchard, M. A., Pybus, O. G., Rambaut, A. (2011). A Bayesian Phylogenetic Method to Estimate Unknown Sequence Ages. Mol Biol Evol 28: 879-887 [Abstract] [Full Text]
Krasnitz, M., Levine, A. J., Rabadan, R. (2008). Anomalies in the Influenza Virus Genome Database: New Biology or Laboratory Errors?. J. Virol. 82: 8947-8950 [Abstract] [Full Text]

_________________
no patents on genes, publish the GISAID sequences !

And many are not explained by lab error.

_________________
www.twitter.com/hniman

name one. (human H3N2)

_________________
no patents on genes, publish the GISAID sequences !

The six Korean sequences.

_________________
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Sequences that exactly match 60 BP stretch of A/sw/Obihiro/1/1993

AGAGTCACAGTCTCTACCAAGAGAAGCCAGCAAACTGTAATCCCGAATATCGGGTCTAGA
CY065976.1 Influenza A virus (A/Philippines/2-MA/1982(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY065968.1 Influenza A virus (A/Philippines/2/1982(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
AB517989.1 Influenza A virus (A/swine/Obihiro/10/1985(H3N2)) HA gene for haemagglutinin, complete cds 109 109 100% 1e-21 100%
FJ203727.1 Influenza A virus (A/Taiwan/VGHYM0109-12/1984(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
FJ203724.1 Influenza A virus (A/Taiwan/VGHYM1210-03/1987(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
FJ203723.1 Influenza A virus (A/Taiwan/VGHYM0713-10/1987(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
FJ769856.1 Influenza A virus (A/Boshehr/388/2006(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
CY035198.1 Influenza A virus (A/Siena/3/1988(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
EU430047.1 Influenza A virus (A/Shiraz/02/2006(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
EU430044.1 Influenza A virus (A/Shiraz/05/2006(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
EU430043.1 Influenza A virus (A/Shiraz/29/2006(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
EU430042.1 Influenza A virus (A/Shiraz/37/2006(H3N2)) nonfunctional hemagglutinin gene, partial sequence 109 109 100% 1e-21 100%
EU430041.1 Influenza A virus (A/Shiraz/54/2006(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
EU430040.1 Influenza A virus (A/Shiraz/13/2006(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
EU311407.1 Influenza A virus (A/Tehran/27/2006(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EU311405.1 Influenza A virus (A/Tehran/16/2006(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EF626619.1 Influenza A virus (A/Phillipines/2/1982(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
DQ975254.1 Influenza A virus (A/swine/Italy/7/1981(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
CY010756.1 Influenza A virus (A/Memphis/8/1988(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY003736.1 Influenza A virus (A/Hong Kong/5/83(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY003544.1 Influenza A virus (A/Hong Kong/7/87(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY003512.1 Influenza A virus (A/Hong Kong/2/88(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009068.1 Influenza A virus (A/Memphis/2/85(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009052.1 Influenza A virus (A/Memphis/33/83(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY002088.1 Influenza A virus (A/Memphis/66/86(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY003720.1 Influenza A virus (A/Hong Kong/26/83(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY008716.1 Influenza A virus (A/Memphis/11/86(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY008724.1 Influenza A virus (A/Memphis/5/88(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY008732.1 Influenza A virus (A/Memphis/15/88(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
AY661065.1 Influenza A virus (A/Victoria/1/89(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661056.1 Influenza A virus (A/Stockholm/12/88(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661053.1 Influenza A virus (A/Colorado/2/86(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661051.1 Influenza A virus (A/Guildford/V728/85(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661050.1 Influenza A virus (A/Wellington/4/85(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661025.1 Influenza A virus (A/Netherlands/233/82(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
D10161.1 Influenza A virus (A/Sichuan/2/1987(H3N2)) gene for hemagglutinin, partial cds 109 109 100% 1e-21 100%
CY008452.1 Influenza A virus (A/Memphis/5/85(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
AF386604.1 Influenza A virus (A/Seoul/11/88(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF233691.1 Influenza A virus (A/Philippines/2/82(H3N2)) hemagglutinin mRNA, partial cds 109 109 100% 1e-21 100%
AF201843.1 Influenza A virus (A/BANGKOK/1/79) hemagglutinin (HA) mRNA, partial cds 109 109 100% 1e-21 100%
AF008894.1 Influenza A virus (A/Baylor5A/Texas/12764/83(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008891.1 Influenza A virus (A/Baylor3B/Texas/24753/85(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
CY003352.1 Influenza A virus (A/Memphis/13/88(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY006315.1 Influenza A virus (A/Hong Kong/14/83(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
AF092063.1 Influenza A virus (A/Wellington/4/85) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008906.1 Influenza A virus (A/Tonga/23/85(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008904.1 Influenza A virus (A/Yokohama/C5/85(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008903.1 Influenza A virus (A/Leningrad/360/86(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008902.1 Influenza A virus (A/Yamagata/96/85(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008901.1 Influenza A virus (A/Bangkok/25/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008900.1 Influenza A virus (A/Gumma/346/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008899.1 Influenza A virus (A/Bangkok/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008898.1 Influenza A virus (A/Stockholm/8/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008897.1 Influenza A virus (A/Czechoslovakia/4/86(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008896.1 Influenza A virus (A/Christ_Church/4/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008895.1 Influenza A virus (A/Christ_Church/1/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008890.1 Influenza A virus (A/Colorado/2/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008887.1 Influenza A virus (A/Qingdao/10/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008886.1 Influenza A virus (A/Shanghai/11/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008885.1 Influenza A virus (A/Los_Angeles/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008884.1 Influenza A virus (A/Sichuan/2/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008883.1 Influenza A virus (A/Guangdong/9/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008882.1 Influenza A virus (A/Sydney/1/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008881.1 Influenza A virus (A/Kobe/768/88(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008880.1 Influenza A virus (A/Chiba/38/88(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008879.1 Influenza A virus (A/Tokyo/1276/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008878.1 Influenza A virus (A/Tokyo/1275/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008875.1 Influenza A virus (A/Connecticut/4/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008871.1 Influenza A virus (A/Texas/17988/84(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008870.1 Influenza A virus (A/Texas/18733/84(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008869.1 Influenza A virus (A/Texas/18088/84(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008868.1 Influenza A virus (A/Oita/3/83(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008867.1 Influenza A virus (A/Caen/1/84(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008672.1 Influenza A virus (A/Czechoslovakia/19/89(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008671.1 Influenza A virus (A/England/88(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008670.1 Influenza A virus (A/Beijing/4/89(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008669.1 Influenza A virus (A/Shanghai/1/89(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008668.1 Influenza A virus (A/Shanghai/16/89(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
D49959.1 Influenza A virus (A/Sichuan/02/87(H3N2)) gene for hemagglutinin, partial cds (HA1 region) 109 109 100% 1e-21 100%
D43791.1 Influenza A virus (A/sw/Obihiro/2/1993(H3N2)) gene for hemagglutinin, partial cds 109 109 100% 1e-21 100%
D43790.1 Influenza A virus (A/sw/Obihiro/1/1993(H3N2)) gene for hemagglutinin, partial cds 109 109 100% 1e-21 100%
D43787.1 Influenza A virus (A/Hokkaido/1/1988(H3N2)) gene for hemagglutinin, partial cds 109 109 100% 1e-21 100%
U08859.1 Influenza A virus A/Philippines/2/82/BS (H3N2) hemagglutinins HA1 and HA2 precursor gene, partial cds 109 109 100% 1e-21 100%
U08858.1 Influenza A virus A/Philippines/2/82 (H3N2) hemagglutinins HA1 and HA2 precursor gene, partial cds 109 109 100% 1e-21 100%
U08905.1 Influenza virus A/Philippines/2/82/BS/ML10 (H3N2) haemagglutinin precursor mRNA, partial cds 109 109 100% 1e-21 100%
L19002.1 Influenza A virus (A/Philippines/2/1982(H3N2)) clone X79 haemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
L19001.1 Influenza A virus (A/England/427/1988(H3N2)) haemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
L18994.1 Influenza A virus (A/Beijing/4/1989(H3N2)) clone X101 haemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
L19000.1 Influenza A virus (A/Beijing/4/1989(H3N2)) haemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
D21173.1 Influenza A virus (A/Sichuan/2/1987(H3N2)) gene for hemagglutinin, partial cds 109 109 100% 1e-21 100%
L19412.1 Influenza A virus (A/Shanghai/11/1987/high yield(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
L19414.1 Influenza A virus (A/Shanghai/11/1987/X99/high yielding reassortant(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
L19415.1 Influenza A virus (A/Shanghai/11/1987/X99a/high yield reassortant(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
L19416.1 Influenza A virus (A/Shanghai/11/1987/X99aE high yield reassortant(H3N2)) hemagglutinin (HA) mRNA, partial cds 109 109 100% 1e-21 100%
M21648.1 Influenza A virus (A/Mem/6/1986(H3N2)) hemagglutinin precursor, gene, partial cds 109 109 100% 1e-21 100%

_________________
www.twitter.com/hniman

Another 60 BP region of identity with A/sw/Obihiro/2/1993
1993 swine sequence is IDENTIAL to human 1975 sequence, A/Mayo Clinic/1/1975 at NUCLEOTIDE level

CY065976.1 Influenza A virus (A/Philippines/2-MA/1982(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY065968.1 Influenza A virus (A/Philippines/2/1982(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
AB517989.1 Influenza A virus (A/swine/Obihiro/10/1985(H3N2)) HA gene for haemagglutinin, complete cds 109 109 100% 1e-21 100%
FJ203729.1 Influenza A virus (A/Taiwan/VGHYM0602-17/1980(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
FJ203727.1 Influenza A virus (A/Taiwan/VGHYM0109-12/1984(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
FJ203726.1 Influenza A virus (A/Taiwan/VGHYM0131-05/1985(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
FJ203725.1 Influenza A virus (A/Taiwan/VGHYM0122-09/1985(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
FJ203724.1 Influenza A virus (A/Taiwan/VGHYM1210-03/1987(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
FJ203723.1 Influenza A virus (A/Taiwan/VGHYM0713-10/1987(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
FJ769856.1 Influenza A virus (A/Boshehr/388/2006(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
CY035198.1 Influenza A virus (A/Siena/3/1988(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
EF626619.1 Influenza A virus (A/Phillipines/2/1982(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EF626616.1 Influenza A virus (A/Mayo Clinic/1/1975(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
EF626610.1 Influenza A virus (A/Bangkok/1/1979(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
DQ975254.1 Influenza A virus (A/swine/Italy/7/1981(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
CY020221.1 Influenza A virus (A/Albany/14/1978(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
DQ508849.1 Influenza A virus (A/Leningrad/360/1986(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ508825.1 Influenza A virus (A/Bangkok/01/1979(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
CY006052.1 Influenza A virus (A/Hong Kong/1/82(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY003744.1 Influenza A virus (A/Hong Kong/7/84(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY003520.1 Influenza A virus (A/Hong Kong/24/85(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY003512.1 Influenza A virus (A/Hong Kong/2/88(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY003504.1 Influenza A virus (A/Hong Kong/6/85(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009068.1 Influenza A virus (A/Memphis/2/85(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY009052.1 Influenza A virus (A/Memphis/33/83(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY002088.1 Influenza A virus (A/Memphis/66/86(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY003720.1 Influenza A virus (A/Hong Kong/26/83(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY008660.1 Influenza A virus (A/Memphis/1/80(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY008708.1 Influenza A virus (A/Memphis/7/85(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY008716.1 Influenza A virus (A/Memphis/11/86(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
AY661065.1 Influenza A virus (A/Victoria/1/89(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661056.1 Influenza A virus (A/Stockholm/12/88(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661052.1 Influenza A virus (A/Stockholm/10/85(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661051.1 Influenza A virus (A/Guildford/V728/85(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661050.1 Influenza A virus (A/Wellington/4/85(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661049.1 Influenza A virus (A/Netherlands/330/85(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661047.1 Influenza A virus (A/Netherlands/209/80(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661046.1 Influenza A virus (A/Rotterdam/577/80(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661044.1 Influenza A virus (A/Bilthoven/628/76(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661025.1 Influenza A virus (A/Netherlands/233/82(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AY661014.1 Influenza A virus (A/Bilthoven/4791/81(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AF405212.1 Influenza A virus (A/Oregon/4/80(H3N2)) hemagglutinin (HA1) gene, partial cds 109 109 100% 1e-21 100%
AF405208.1 Influenza A virus (A/Baylor2A/81(H3N2)) hemagglutinin (HA1) gene, partial cds 109 109 100% 1e-21 100%
AF405207.1 Influenza A virus (A/Baylor1B/83(H3N2)) hemagglutinin (HA1) gene, partial cds 109 109 100% 1e-21 100%
AF405206.1 Influenza A virus (A/Baylor1A/81(H3N2)) hemagglutinin (HA1) gene, partial cds 109 109 100% 1e-21 100%
D10161.1 Influenza A virus (A/Sichuan/2/1987(H3N2)) gene for hemagglutinin, partial cds 109 109 100% 1e-21 100%
CY008172.1 Influenza A virus (A/Nanjing/28/84(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY008468.1 Influenza A virus (A/Memphis/3/80(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY008452.1 Influenza A virus (A/Memphis/5/85(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
AF233691.1 Influenza A virus (A/Philippines/2/82(H3N2)) hemagglutinin mRNA, partial cds 109 109 100% 1e-21 100%
AF201846.1 Influenza A virus (A/Praha/2/83(HI minus)) hemagglutinin (HA) mRNA, partial cds 109 109 100% 1e-21 100%
AF201844.1 Influenza A virus (A/Belgium/2/81) hemagglutinin (HA) mRNA, partial cds 109 109 100% 1e-21 100%
AF201843.1 Influenza A virus (A/BANGKOK/1/79) hemagglutinin (HA) mRNA, partial cds 109 109 100% 1e-21 100%
AF008907.1 Influenza A virus (A/Baylor4B/Texas/39989/88(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008894.1 Influenza A virus (A/Baylor5A/Texas/12764/83(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008892.1 Influenza A virus (A/Baylor6B/Texas/25784/85(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008891.1 Influenza A virus (A/Baylor3B/Texas/24753/85(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008861.1 Influenza A virus (A/Baylor6A/Texas/12835/83(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
CY007627.1 Influenza A virus (A/Memphis/1/81(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY007619.1 Influenza A virus (A/Memphis/4/80(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY006891.1 Influenza A virus (A/Memphis/9/80(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY006851.1 Influenza A virus (A/Nanjing/36/83(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY006323.1 Influenza A virus (A/Hong Kong/4/84(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
CY006315.1 Influenza A virus (A/Hong Kong/14/83(H3N2)) segment 4, complete sequence 109 109 100% 1e-21 100%
AF092063.1 Influenza A virus (A/Wellington/4/85) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008908.1 Influenza A virus (A/Cheng-mei/4/85(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008906.1 Influenza A virus (A/Tonga/23/85(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008905.1 Influenza A virus (A/Christ_Church/2/88(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008904.1 Influenza A virus (A/Yokohama/C5/85(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008903.1 Influenza A virus (A/Leningrad/360/86(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008902.1 Influenza A virus (A/Yamagata/96/85(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008901.1 Influenza A virus (A/Bangkok/25/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008900.1 Influenza A virus (A/Gumma/346/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008899.1 Influenza A virus (A/Bangkok/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008898.1 Influenza A virus (A/Stockholm/8/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008897.1 Influenza A virus (A/Czechoslovakia/4/86(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008896.1 Influenza A virus (A/Christ_Church/4/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008895.1 Influenza A virus (A/Christ_Church/1/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008893.1 Influenza A virus (A/Mississippi/1/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008890.1 Influenza A virus (A/Colorado/2/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008889.1 Influenza A virus (A/Guizhou/1/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008888.1 Influenza A virus (A/Victoria/7/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008887.1 Influenza A virus (A/Qingdao/10/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008886.1 Influenza A virus (A/Shanghai/11/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008885.1 Influenza A virus (A/Los_Angeles/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008884.1 Influenza A virus (A/Sichuan/2/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008883.1 Influenza A virus (A/Guangdong/9/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008882.1 Influenza A virus (A/Sydney/1/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008881.1 Influenza A virus (A/Kobe/768/88(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008880.1 Influenza A virus (A/Chiba/38/88(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008879.1 Influenza A virus (A/Tokyo/1276/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008878.1 Influenza A virus (A/Tokyo/1275/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008877.1 Influenza A virus (A/Yamaneshi/497/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008876.1 Influenza A virus (A/Fukuoka/C29/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008875.1 Influenza A virus (A/Connecticut/4/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008874.1 Influenza A virus (A/Texas/24752/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008873.1 Influenza A virus (A/New_Jersey/4/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008872.1 Influenza A virus (A/Michigan/1/(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008871.1 Influenza A virus (A/Texas/17988/84(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008870.1 Influenza A virus (A/Texas/18733/84(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008869.1 Influenza A virus (A/Texas/18088/84(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008868.1 Influenza A virus (A/Oita/3/83(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF008863.1 Influenza A virus (A/Alaska/84(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
D49959.1 Influenza A virus (A/Sichuan/02/87(H3N2)) gene for hemagglutinin, partial cds (HA1 region) 109 109 100% 1e-21 100%
D43791.1 Influenza A virus (A/sw/Obihiro/2/1993(H3N2)) gene for hemagglutinin, partial cds 109 109 100% 1e-21 100%
D43790.1 Influenza A virus (A/sw/Obihiro/1/1993(H3N2)) gene for hemagglutinin, partial cds 109 109 100% 1e-21 100%
U08859.1 Influenza A virus A/Philippines/2/82/BS (H3N2) hemagglutinins HA1 and HA2 precursor gene, partial cds 109 109 100% 1e-21 100%
U08858.1 Influenza A virus A/Philippines/2/82 (H3N2) hemagglutinins HA1 and HA2 precursor gene, partial cds 109 109 100% 1e-21 100%
U08905.1 Influenza virus A/Philippines/2/82/BS/ML10 (H3N2) haemagglutinin precursor mRNA, partial cds 109 109 100% 1e-21 100%
L19002.1 Influenza A virus (A/Philippines/2/1982(H3N2)) clone X79 haemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
L19003.1 Influenza A virus (A/Mississippi/1/1985(H3N2)) clone X-87 haemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
D21173.1 Influenza A virus (A/Sichuan/2/1987(H3N2)) gene for hemagglutinin, partial cds 109 109 100% 1e-21 100%
L19412.1 Influenza A virus (A/Shanghai/11/1987/high yield(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
L19414.1 Influenza A virus (A/Shanghai/11/1987/X99/high yielding reassortant(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
L19415.1 Influenza A virus (A/Shanghai/11/1987/X99a/high yield reassortant(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
L19416.1 Influenza A virus (A/Shanghai/11/1987/X99aE high yield reassortant(H3N2)) hemagglutinin (HA) mRNA, partial cds 109 109 100% 1e-21 100%
M21648.1 Influenza A virus (A/Mem/6/1986(H3N2)) hemagglutinin precursor, gene, partial cds 109 109 100% 1e-21 100%
J02092.1 Influenza A virus (A/Bangkok/1/1979(H3N2)) hemagglutinin precursor, gene, partial cds 109 109 100% 1e-21 100%
M57630.1 Influenza A virus (A/Alabama/1/1981(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%

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This 60 BP segment from 2010 swine in Canada that is identical to human sequences from 1996:

GGTCTAGACCCTGGGTAAGGGGTGTCTCCAGCATAATAAGCATCTATTGGACAATAGTAA

JN162054.1 Influenza A virus (A/swine/Minnesota/A01049346/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
JN162051.1 Influenza A virus (A/swine/Iowa/A01049254/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825243.1 Influenza A virus (A/swine/QC/2108-2/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825235.1 Influenza A virus (A/swine/QC/1840-2/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825229.1 Influenza A virus (A/swine/QC/1698-5/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825226.1 Influenza A virus (A/swine/QC/1698-4/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825223.1 Influenza A virus (A/swine/QC/1698-2/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825218.1 Influenza A virus (A/swine/QC/1698-1/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825210.1 Influenza A virus (A/swine/QC/1685-5/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825203.1 Influenza A virus (A/swine/QC/1685-1/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825198.1 Influenza A virus (A/swine/QC/440-A/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ825182.1 Influenza A virus (A/swine/QC/414/2009(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
JF411012.1 Influenza A virus (A/swine/Quebec/1259260/2010(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
JF316643.1 Influenza A virus (A/swine/Pennsylvania/057108-1/2010(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
GU135918.1 Influenza A virus (A/swine/Iowa/H03HB4/2003(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
HQ315643.1 Influenza A virus (A/swine/Minnesota/1300/2007(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
GU817057.1 Influenza A virus (A/swine/Minnesota/02952/2009(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
GU817053.1 Influenza A virus (A/swine/Minnesota/02948/2009(H3N2)) segment 4 hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
FJ519977.1 Influenza A virus (A/swine/Minnesota/7931/2007(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
FJ519976.1 Influenza A virus (A/swine/Minnesota/5947/2007(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
FJ519971.1 Influenza A virus (A/swine/Minnesota/65767/2006(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
CY045575.1 Influenza A virus (A/swine/Oklahoma/011506/2007(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY045559.1 Influenza A virus (A/swine/Kansas/015252/2009(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY045551.1 Influenza A virus (A/swine/Oklahoma/001142/2009(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
EU826543.2 Influenza A virus (A/swine/Quebec/4001/2005(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
CY040584.1 Influenza A virus (A/swine/Minnesota/24877/2005(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY040583.1 Influenza A virus (A/swine/Minnesota/21057/2005(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY040582.1 Influenza A virus (A/swine/Minnesota/18815/2005(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY040581.1 Influenza A virus (A/swine/Iowa/36241/2005(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY040538.1 Influenza A virus (A/swine/North Carolina/38715/2005(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY040518.1 Influenza A virus (A/swine/Illinois/34642/2005(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY040516.1 Influenza A virus (A/swine/Iowa/36243/2005(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY040511.1 Influenza A virus (A/swine/Oklahoma/225-14/2008(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
EU697209.1 Influenza A virus (A/turkey/North Carolina/353568/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU697204.1 Influenza A virus (A/turkey/Minnesota/366767/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
CY035442.1 Influenza A virus (A/swine/Minnesota/SG-00242/2006(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY035422.1 Influenza A virus (A/swine/Minnesota/SG-00236/2007(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
CY035419.1 Influenza A virus (A/swine/Minnesota/SG-00235/2007(H3N2)) segment 4 sequence 109 109 100% 1e-21 100%
EU798797.1 Influenza A virus (A/swine/Korea/CY10/2007(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU743210.1 Influenza A virus (A/turkey/MN/366767/2005(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU735818.1 Influenza A virus (A/turkey/OH/313053/2004(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU422988.1 Influenza A virus (A/swine/Iowa/H03HO7/2003(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU422987.1 Influenza A virus (A/swine/Iowa/H02AS8/2002(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU399751.1 Influenza A virus (A/Ontario/1252/2007(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EU301209.1 Influenza A virus (A/swine/Korea/JNS06/2004(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EF551053.1 Influenza A virus (A/swine/North Carolina/2003(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
EF551045.1 Influenza A virus (A/turkey/Illinois/2004(H3N2)) segment 4 hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ470002.1 Influenza A virus (A/turkey/Ontario/31232/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ469994.1 Influenza A virus (A/swine/Ontario/33853/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ469986.1 Influenza A virus (A/swine/Manitoba/12707/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ469978.1 Influenza A virus (A/swine/British Columbia/28103/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ469970.1 Influenza A virus (A/swine/Alberta/14722/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ469962.1 Influenza A virus (A/Ontario/RV1273/2005(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ150425.1 Influenza A virus (A/swine/MI/PU243/04 (H3N1)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
DQ145537.1 Influenza A virus (A/swine/Minnesota/00395/2004(H3N1)) hemagglutinin gene, complete cds 109 109 100% 1e-21 100%
DQ159067.1 Influenza A virus (A/Turkey/Canada-Manitoba/NS-01782-2/05(H3)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
DQ159066.1 Influenza A virus (A/Turkey/Canada-Ontario/NS-01839-1/05(H3)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
DQ159065.1 Influenza A virus (A/Turkey/Canada-Ontario/NS-01784-2/05(H3)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
DQ141307.1 Influenza A virus (A/swine/Canada-BC/1A/05(H3)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
DQ132433.1 Influenza A virus (A/turkey/Canada-BC/NS-01529-3/05(H3)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
DQ335771.1 Influenza A virus (A/turkey/Ohio/313053/04(H3N2)) hemagglutinin (HA) gene, complete cds 109 109 100% 1e-21 100%
AF362820.1 Influenza A virus (A/human/Taiwan/0095/96(H3N2)) hemagglutinin (HA) mRNA, partial cds 109 109 100% 1e-21 100%
AF268126.1 Influenza A virus (A/Swine/Wisconsin/14094/99(H3N2)) hemagglutinin protein gene, partial cds 109 109 100% 1e-21 100%
AF268125.1 Influenza A virus (A/Swine/Oklahoma/18089/99(H3N2)) hemagglutinin protein gene, partial cds 109 109 100% 1e-21 100%
AF268124.1 Influenza A virus (A/Swine/Illinois/21587/99(H3N2)) hemagglutinin protein gene, partial cds 109 109 100% 1e-21 100%
AF268123.1 Influenza A virus (A/Swine/Oklahoma/18717/99(H3N2)) hemagglutinin protein gene, partial cds 109 109 100% 1e-21 100%
DQ241763.1 Influenza A virus (A/swine/Alberta/Biovet1/05(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
DQ241762.1 Influenza A virus (A/swine/Ontario/Biovet1/05(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
DQ241761.1 Influenza A virus (A/swine/Quebec/Biovet1/05(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%
AF180650.1 Influenza A virus (A/New York/37/96(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AF180615.1 Influenza A virus (A/Indiana/1/96(H3N2)) hemagglutinin gene, partial cds 109 109 100% 1e-21 100%
AF008731.1 Influenza A virus (A/Wisconsin/3/96(H3N2)) hemagglutinin (HA) gene, partial cds 109 109 100% 1e-21 100%

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