Rhiza Labs FluTracker Forum

Weybridge has released sequences from all 8 gene segments from a novel H1N2, A/swine/England/1382/2010, which has internal genes from pandemic H1n1 and an H1 from human H1N1 circulating in the late 70's, early 80's.

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LOCUS JF290391 1701 bp cRNA linear VRL 01-MAR-2011
DEFINITION Influenza A virus (A/swine/England/1382/2010(H1N2)) segment 4
hemagglutinin (HA) gene, complete cds.
ACCESSION JF290391
VERSION JF290391.1 GI:323145496
KEYWORDS .
SOURCE Influenza A virus (A/swine/England/1382/2010(H1N2))
ORGANISM Influenza A virus (A/swine/England/1382/2010(H1N2))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 1701)
AUTHORS Howard,W.A., Essen,S.C., Strugnell,B., Russell,C., Barrass,L.,
Reid,S.M. and Brown,I.H.
TITLE Detection of a novel reassortant of pandemic (H1N1) 2009 and
human-origin influenza viruses in pigs in the UK
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1701)
AUTHORS Howard,W.A., Essen,S.C., Strugnell,B., Russell,C., Barrass,L.,
Reid,S.M. and Brown,I.H.
TITLE Direct Submission
JOURNAL Submitted (03-FEB-2011) Virology, Veterinary Laboratories Agency,
Woodham Lane, Weybridge, Surrey KT15 3NB, UK
COMMENT GenBank Accession Numbers JF290388-JF290395 represent sequences
from the 8 segments of Influenza A virus
(A/swine/England/1382/2010(H1N2)).
FEATURES Location/Qualifiers
source 1..1701
/organism="Influenza A virus
(A/swine/England/1382/2010(H1N2))"
/mol_type="viral cRNA"
/strain="A/swine/England/1382/2010"
/serotype="H1N2"
/host="swine"
/db_xref="taxon:980864"
/segment="4"
/country="United Kingdom"
/collection_date="13-Apr-2010"
/note="embryonated chicken egg passage"
gene 1..1701
/gene="HA"
CDS 1..1701
/gene="HA"
/codon_start=1
/product="hemagglutinin"
/protein_id="ADX31845.1"
/db_xref="GI:323145497"
/translation="MKAKLMVLLCVLSATDADTICIGYHANNSTDTVDTVLEKNVTVT
HSVNLLEDSHNGKLCRLKGIAPLQLGKCSVAGWILGNPECKSLFSRKSWSYIAETPNP
ENGVCYPGHFSDYEELREQLNSVSSFERFEIFPKESSWPQHNITKGVTVSCSHNGKSS
FYQNLLWLTGKDGSYPNLNKSYVNDKKKEVLVLWGIHHPANIEDQRAIYHKETAYVSV
VSSHYNRRFTPEITKRPKVRNQEGRINYYWTLLEPGDTIIFEANGNLIAPRYAFALSR
GFESGIIVSNASMDECNTKCQTPQGAINSSRPFQNVHPVTIGECPKYVRSTKLRMVTG
LRNIPSIQSRGLFGAIAGFIEGGWTGMIDGWYGYHHRNEQGSGYAADQESTQNAINGI
TNKVNSIIEKMNTQFTAVGKEFNNLEKRMENLNKKVDDGFLDIWTYNAELLVLLENER
TLDFHDSNVKGLYEKVKNQLKNNAKEIGNGCFEFYHKCNNECMESVKNGTYDYPRYSE
ESSLNRKKIDGVKLESMGVYQILAIYSTVASSLTILVSLGAISFWMCSNGSLQCKICI
"
ORIGIN
1 atgaaagcaa aactaatggt tctgttatgt gtactttcag ctacagatgc ggacacaata
61 tgtataggct accatgctaa caattcaact gacactgttg acacagtgct cgaaaaaaac
121 gtaacagtga cacactccgt caacctactt gaggacagtc acaatgggaa actatgcaga
181 ctgaaaggga tagctccact acaattggga aaatgcagcg ttgccggatg gatcttagga
241 aacccagaat gcaaatcact attttctagg aagtcatggt cctacattgc agaaacacca
301 aatcctgaga atggtgtatg ttacccagga catttctccg actatgagga gctgagggag
361 caattgaact cagtatcatc attcgagaga ttcgaaatat tccctaaaga aagctcatgg
421 cctcaacaca atataaccaa aggagtaacg gtatcatgct cccacaatgg aaaaagcagt
481 ttttaccaaa atttgctgtg gctgacggga aaagatggct cgtacccaaa cctgaacaag
541 tcctatgtta atgacaaaaa gaaagaagtc cttgtattat ggggtataca ccatccggct
601 aacatagagg atcaaagggc catataccac aaagaaactg cttatgtttc tgtagtgtcc
661 tcacattata acaggaggtt taccccagaa attacaaaaa gacccaaggt aagaaatcag
721 gaagggagaa ttaactacta ctggactcta ctggaacccg gtgacacaat aatattcgag
781 gcaaatggaa atctaatagc gccaagatat gctttcgcat tgagtagagg ctttgaatca
841 ggaatcatcg tctcaaatgc atcgatggat gaatgcaaca caaagtgtca aacaccccag
901 ggagctataa acagtagtcg tcctttccag aatgtacacc cagttactat cggagaatgc
961 cctaagtacg ttaggagtac aaaattaaga atggttacag gactaaggaa cattccatcc
1021 attcaatcaa gaggtctatt tggggccatt gctggtttca ttgaaggggg gtggaccgga
1081 atgatagacg gatggtatgg ttatcatcat cggaatgaac agggatctgg ctatgctgca
1141 gatcaagaaa gcacacagaa tgccataaac ggaattacaa acaaggtgaa ctctataata
1201 gagaaaatga acacccaatt cacagccgta ggtaaagagt tcaacaactt ggaaaaaagg
1261 atggaaaact tgaataaaaa ggttgacgac ggatttctgg acatttggac atataatgca
1321 gaattgttgg ttctactgga aaatgaaaga accttggatt ttcatgattc aaatgtgaag
1381 ggcttatatg aaaaagtgaa gaaccaatta aaaaacaatg ccaaagaaat aggaaacggg
1441 tgttttgaat tctaccacaa gtgtaacaat gaatgcatgg aaagtgtaaa aaatgggact
1501 tatgactatc caagatactc agaggaatca agcttaaaca ggaaaaaaat tgatggtgtg
1561 aaattggaat caatgggagt ctatcagatt ctggcgatct actcaactgt cgccagttca
1621 ctaacgattt tagtctccct gggggcaatc agcttttgga tgtgttctaa tgggtctttg
1681 cagtgcaaaa tatgcatctg a

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Top 100 HA matches

JF290391.1 Influenza A virus (A/swine/England/1382/2010(H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 3372 3372 100% 0.0 100%
JF297998.1 Influenza A virus (A/swine/England/1428/2009(H1N2)) segment 4 hemagglutinin (HA) gene, partial cds 3154 3154 99% 0.0 98%
AF085417.1 Influenza A virus (A/swine/England/72685/96(H1N2)) haemagglutinin precursor, mRNA, complete cds 2650 2650 100% 0.0 94%
AF085416.1 Influenza A virus (A/swine/England/17394/96(H1N2)) haemagglutinin precursor, mRNA, complete cds 2619 2619 100% 0.0 94%
CY019963.1 Influenza A virus (A/Arizona/14/1978(H1N1)) segment 4, complete sequence 2111 2111 100% 0.0 90%
CY010908.1 Influenza A virus (A/Memphis/7/1980(H1N1)) segment 4, complete sequence 2111 2111 100% 0.0 90%
CY019229.1 Influenza A virus (A/Memphis/47/1983(H1N1)) segment 4, complete sequence 2103 2103 100% 0.0 90%
CY019221.1 Influenza A virus (A/Memphis/31/1983(H1N1)) segment 4, complete sequence 2103 2103 100% 0.0 90%
CY017869.1 Influenza A virus (A/Memphis/25/1983(H1N1)) segment 4, complete sequence 2103 2103 100% 0.0 90%
CY017435.1 Influenza A virus (A/Memphis/26/1983(H1N1)) segment 4, complete sequence 2103 2103 100% 0.0 90%
CY011312.1 Influenza A virus (A/Memphis/13/1983(H1N1)) segment 4, complete sequence 2103 2103 100% 0.0 90%
CY026411.1 Influenza A virus (A/Albany/8/1979(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY021797.1 Influenza A virus (A/Albany/20/1978(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY021717.1 Influenza A virus (A/California/10/1978(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY020293.1 Influenza A virus (A/Brazil/11/1978(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY020237.1 Influenza A virus (A/Memphis/39/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY019763.1 Influenza A virus (A/Memphis/54/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY019237.1 Influenza A virus (A/Memphis/53/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY019093.1 Influenza A virus (A/Memphis/51/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY019085.1 Influenza A virus (A/Memphis/50/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY019037.1 Influenza A virus (A/Memphis/38/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY017427.1 Influenza A virus (A/Memphis/22/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY017419.1 Influenza A virus (A/Memphis/21/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY017243.1 Influenza A virus (A/Memphis/30/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY017227.1 Influenza A virus (A/Memphis/28/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY017219.1 Influenza A virus (A/Memphis/27/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY017203.1 Influenza A virus (A/Memphis/23/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY017195.1 Influenza A virus (A/Memphis/20/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY010964.2 Influenza A virus (A/Memphis/16/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY013295.1 Influenza A virus (A/Memphis/14/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY012888.1 Influenza A virus (A/Memphis/2/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY010924.1 Influenza A virus (A/Memphis/4/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY012440.1 Influenza A virus (A/Memphis/19/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY010980.2 Influenza A virus (A/Memphis/18/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY010972.2 Influenza A virus (A/Memphis/17/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY010940.1 Influenza A virus (A/Memphis/8/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY010956.2 Influenza A virus (A/Memphis/15/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY010948.2 Influenza A virus (A/Memphis/12/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY011304.1 Influenza A virus (A/Memphis/11/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY010932.1 Influenza A virus (A/Memphis/7/1983(H1N1)) segment 4, complete sequence 2095 2095 100% 0.0 90%
CY019739.1 Influenza A virus (A/Memphis/1/1979(H1N1)) segment 4, complete sequence 2091 2091 100% 0.0 90%
CY020453.1 Influenza A virus (A/India/6263/1980(H1N1)) segment 4, complete sequence 2087 2087 100% 0.0 90%
CY020173.1 Influenza A virus (A/Lackland/7/1978(H1N1)) segment 4, complete sequence 2087 2087 100% 0.0 90%
CY019077.1 Influenza A virus (A/Memphis/48/1983(H1N1)) segment 4, complete sequence 2087 2087 100% 0.0 90%
CY019069.1 Influenza A virus (A/Memphis/46/1983(H1N1)) segment 4, complete sequence 2087 2087 100% 0.0 90%
CY019061.1 Influenza A virus (A/Memphis/42/1983(H1N1)) segment 4, complete sequence 2087 2087 100% 0.0 90%
CY017877.1 Influenza A virus (A/Memphis/35/1983(H1N1)) segment 4, complete sequence 2087 2087 100% 0.0 90%
CY017235.1 Influenza A virus (A/Memphis/29/1983(H1N1)) segment 4, complete sequence 2087 2087 100% 0.0 90%
CY017211.1 Influenza A virus (A/Memphis/24/1983(H1N1)) segment 4, complete sequence 2087 2087 100% 0.0 90%
CY010916.2 Influenza A virus (A/Memphis/3/1983(H1N1)) segment 4, complete sequence 2087 2087 100% 0.0 90%
CY009292.1 Influenza A virus (A/Hong Kong/117/77(H1N1)) segment 4, complete sequence 2087 2087 100% 0.0 90%
M38353.1 Influenza A virus (A/Kiev/59/1979(H1N1)) hemagglutinin (HA) gene, complete cds 2087 2087 100% 0.0 90%
CY028724.1 Influenza A virus (A/California/45/1978(H1N1)) segment 4, complete sequence 2079 2079 100% 0.0 90%
CY027531.1 Influenza A virus (A/Memphis/44/1983(H1N1)) segment 4, complete sequence 2079 2079 100% 0.0 90%
CY020437.1 Influenza A virus (A/Chile/1/1983(H1N1)) segment 4, complete sequence 2079 2079 100% 0.0 90%
CY020165.1 Influenza A virus (A/Lackland/3/1978(H1N1)) segment 4, complete sequence 2079 2079 100% 0.0 90%
CY019053.1 Influenza A virus (A/Memphis/41/1983(H1N1)) segment 4, complete sequence 2079 2079 100% 0.0 90%
CY019045.1 Influenza A virus (A/Memphis/40/1983(H1N1)) segment 4, complete sequence 2079 2079 100% 0.0 90%
CY017251.1 Influenza A virus (A/Memphis/32/1983(H1N1)) segment 4, complete sequence 2079 2079 100% 0.0 90%
CY013879.1 Influenza A virus (A/Memphis/10/1983(H1N1)) segment 4, complete sequence 2079 2079 100% 0.0 90%
JF297997.1 Influenza A virus (A/swine/England/1157/2009(H1N2)) segment 4 hemagglutinin (HA) gene, partial cds 2077 2077 97% 0.0 90%
EU053148.1 Influenza A virus (A/swine/Bakum/1832/2000(H1N2)) segment 4 hemagglutinin gene, complete cds 2077 2077 98% 0.0 90%
AF085413.1 Influenza A virus (A/swine/Scotland/410440/94(H1N2)) haemagglutinin precursor, mRNA, complete cds 2076 2076 100% 0.0 90%
CY012880.1 Influenza A virus (A/Memphis/1/1983(H1N1)) segment 4, complete sequence 2072 2072 100% 0.0 90%
AF085415.1 Influenza A virus (A/swine/England/690421/95(H1N2)) haemagglutinin precursor, mRNA, complete cds 2072 2072 100% 0.0 90%
CY021029.1 Influenza A virus (A/Baylor/4052/1981(H1N1)) segment 4, complete sequence 2064 2064 100% 0.0 90%
CY020573.1 Influenza A virus (A/Tientsin/78/1977(H1N1)) segment 4, complete sequence 2064 2064 100% 0.0 90%
GQ161104.1 Influenza A virus (A/swine/Bakum/1832/2000(H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 2058 2058 98% 0.0 90%
CY021909.1 Influenza A virus (A/USSR/46/1979(H1N1)) segment 4, complete sequence 2056 2056 100% 0.0 90%
CY020189.1 Influenza A virus (A/New Zealand/7/1983(H1N1)) segment 4, complete sequence 2056 2056 100% 0.0 90%
CY015524.1 Influenza A virus (A/Memphis/6/1983(H1N1)) segment 4, complete sequence 2056 2056 100% 0.0 90%
X17221.1 Influenza A virus (A/CHR/157/83(H1N1)) gene for haemagglutinin, genomic RNA 2048 2048 100% 0.0 90%
CY021037.1 Influenza A virus (A/Christ's Hospital/157/1982(H1N1)) segment 4, complete sequence 2040 2040 100% 0.0 90%
CY020181.1 Influenza A virus (A/Maryland/2/1980(H1N1)) segment 4, complete sequence 2040 2040 100% 0.0 90%
CY019971.1 Influenza A virus (A/Roma/1949(H1N1)) segment 4, complete sequence 2040 2040 100% 0.0 90%
CY010900.2 Influenza A virus (A/Memphis/17/1978(H1N1)) segment 4, complete sequence 2040 2040 100% 0.0 90%
CY010868.2 Influenza A virus (A/Memphis/10/1978(H1N1)) segment 4, complete sequence 2040 2040 100% 0.0 90%
CY010364.1 Influenza A virus (A/Baylor/11515/82(H1N1)) segment 4, complete sequence 2040 2040 100% 0.0 90%
CY019947.1 Influenza A virus (A/Albany/4835/1948(H1N1)) segment 4, complete sequence 2032 2032 100% 0.0 90%
CY017363.1 Influenza A virus (A/Memphis/20/1978(H1N1)) segment 4, complete sequence 2032 2032 100% 0.0 90%
CY010892.2 Influenza A virus (A/Memphis/15/1978(H1N1)) segment 4, complete sequence 2032 2032 100% 0.0 90%
CY010884.2 Influenza A virus (A/Memphis/13/1978(H1N1)) segment 4, complete sequence 2032 2032 100% 0.0 90%
CY011296.1 Influenza A virus (A/Memphis/1/1978(H1N1)) segment 4, complete sequence 2032 2032 100% 0.0 90%
CY010876.1 Influenza A virus (A/Memphis/11/1978(H1N1)) segment 4, complete sequence 2032 2032 100% 0.0 90%
DQ508897.1 Influenza A virus (A/USSR/90/1977(H1N1)) hemagglutinin (HA) gene, complete cds 2032 2032 100% 0.0 90%
CY010372.1 Influenza A virus (A/USSR/90/77(H1N1)) segment 4, complete sequence 2032 2032 100% 0.0 90%
CY009284.1 Influenza A virus (A/USSR/92/77(H1N1)) segment 4, complete sequence 2032 2032 100% 0.0 90%
CY021725.1 Influenza A virus (A/Memphis/1/1984(H1N1)) segment 4, complete sequence 2024 2024 100% 0.0 90%
CY021701.1 Influenza A virus (A/Albany/4836/1950(H1N1)) segment 4, complete sequence 2024 2024 100% 0.0 90%
CY019755.1 Influenza A virus (A/Memphis/49/1983(H1N1)) segment 4, complete sequence 2024 2024 100% 0.0 90%
CY009620.1 Influenza A virus (A/Baylor/11735/82(H1N1)) segment 4, complete sequence 2024 2024 100% 0.0 90%
AF085414.1 Influenza A virus (A/swine/England/438207/94(H1N2)) haemagglutinin precursor, mRNA, complete cds 2016 2016 100% 0.0 89%
M38312.1 Influenza A virus (A/Leningrad/1954/1(H1N1)) hemagglutinin gene, complete cds 2016 2016 100% 0.0 89%
CY020485.1 Influenza A virus (A/Tonga/14/1984(H1N1)) segment 4, complete sequence 2008 2008 100% 0.0 89%
U85986.1 Influenza A virus (A/swine/England/191973/92(H1N7)) haemagglutinin HA mRNA, partial cds 2002 2002 99% 0.0 89%
CY021733.1 Influenza A virus (A/New York/2924-1/1986(H1N1)) segment 4, complete sequence 1992 1992 100% 0.0 89%
CY020565.1 Influenza A virus (A/Texas/2922-3/1986(H1N1)) segment 4, complete sequence 1992 1992 100% 0.0 89%
CY019101.1 Influenza A virus (A/Memphis/12/1986(H1N1)) segment 4, complete sequence 1984 1984 100% 0.0 89%
DQ508873.1 Influenza A virus (A/Taiwan/01/1986(H1N1)) hemagglutinin (HA) gene, complete cds 1984 1984 100% 0.0 89%
AJ289702.1 Influenza A virus segment 4 gene for haemagglutinin, genomic RNA, strain A/Fiji/15899/83 1984 1984 100% 0.0 89%

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Top 100 NA matches

JF290393.1 Influenza A virus (A/swine/England/1382/2010(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 2801 2837 100% 0.0 100%
JF297999.1 Influenza A virus (A/swine/England/1428/2009(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 2589 2589 99% 0.0 98%
AJ412702.1 Influenza A virus (A/swine/Cotes d'Armor/604/99(H1N2)) NAN2 gene for neuraminidase, genomic RNA 1984 1984 100% 0.0 92%
FJ985238.1 Influenza A virus (A/turkey/France/05045/2005(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 1824 1824 99% 0.0 91%
AJ412700.1 Influenza A virus (A/swine/UnitedKingdom/119404/91(H3N2)) NAN2 gene for neuraminidase, genomic RNA 1794 1794 100% 0.0 91%
AM777822.1 Influenza A virus (A/swine/Cotes d'Armor/43394/2002(H1N2)) partial segment 6, genomic RNA 1774 1774 96% 0.0 91%
AM777816.1 Influenza A virus (A/swine/Morbihan/0028/2007(H1N2)) partial segment 6, genomic RNA 1774 1774 97% 0.0 91%
JF298000.1 Influenza A virus (A/swine/England/523/2010(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 1766 1766 99% 0.0 90%
AM777817.1 Influenza A virus (A/swine/Cotes d'Armor/0040/2007(H1N2)) partial segment 6, genomic RNA 1758 1758 97% 0.0 91%
AM777820.1 Influenza A virus (A/swine/Cotes d'Armor/0123/2006(H1N2)) partial segment 6, genomic RNA 1748 1748 97% 0.0 90%
AM777819.1 Influenza A virus (A/swine/Cotes d'Armor/0111/2007(H1N2)) partial segment 6, genomic RNA 1725 1725 97% 0.0 90%
AM777823.1 Influenza A virus (A/swine/Cotes d'Armor/0214/2006(H1N2)) partial segment 6, genomic RNA 1699 1699 95% 0.0 90%
AM777821.1 Influenza A virus (A/swine/Cotes d'Armor/0136_17/2006(H1N2)) partial segment 6, genomic RNA 1693 1693 96% 0.0 90%
AM777818.1 Influenza A virus (A/swine/Cotes d'Armor/0041/2007(H1N2)) partial segment 6, genomic RNA 1687 1687 97% 0.0 90%
JF297996.1 Influenza A virus (A/swine/England/236/2009(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 1685 1685 96% 0.0 90%
AJ412704.1 Influenza A virus (A/swine/Cotes d'Armor/2433/98(H1N2)) NAN2 gene for neuraminidase, genomic RNA 1635 1635 100% 0.0 89%
AY590829.1 Influenza A virus (A/sw/Gent/7625/99(H1N2)) neuraminidase (NA) gene, complete cds 1596 1596 100% 0.0 89%
AJ412705.1 Influenza A virus (A/swine/Cotes d'Armor/790/97(H1N2)) NAN2 gene for neuraminidase, genomic RNA 1596 1596 100% 0.0 89%
AJ412701.1 Influenza A virus (A/swine/Italy/1521/98(H1N2)) partial NAN2 gene for neuraminidase, genomic RNA 1584 1584 98% 0.0 89%
CY021095.1 Influenza A virus (A/Albany/20/1974(H3N2)) segment 6, complete sequence 1564 1564 100% 0.0 88%
CY003730.1 Influenza A virus (A/Hong Kong/43/75(H3N2)) segment 6, complete sequence 1564 1564 100% 0.0 88%
FJ791296.1 Influenza A virus (A/swine/Gent/177/2002(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 1556 1556 100% 0.0 88%
CY015510.1 Influenza A virus (A/Victoria/1968(H3N2)) segment 6, complete sequence 1556 1556 100% 0.0 88%
J02173.1 Influenza A virus (A/X-47(H3N2)) neuraminidase gene, complete cds 1556 1556 100% 0.0 88%
AY590826.1 Influenza A virus (A/sw/Gent/24/00(H1N2)) neuraminidase (NA) gene, complete cds 1550 1550 99% 0.0 88%
AB124663.1 Influenza A virus (A/Yamanashi/2/77(H3N2)) NA gene for neuraminidase, complete cds 1550 1550 99% 0.0 88%
AM920738.1 Influenza A virus (A/swine/Germany/SEk1178/2000(H1N2)) NA gene for neuraminidase, genomic RNA 1548 1548 100% 0.0 88%
EU053150.1 Influenza A virus (A/swine/Bakum/1832/2000(H1N2)) segment 6 neuraminidase gene, complete cds 1548 1548 100% 0.0 88%
CY009006.1 Influenza A virus (A/Hong Kong/33/73(H3N2)) segment 6, complete sequence 1548 1548 100% 0.0 88%
AY210136.1 Influenza A virus (A/Victoria/4/72(H3N2)) neuraminidase (NA) gene, complete cds 1542 1542 99% 0.0 88%
AY210135.1 Influenza A virus (A/Tokyo/31/72(H3N2)) neuraminidase (NA) gene, complete cds 1542 1542 99% 0.0 88%
FJ791299.1 Influenza A virus (A/swine/Gent/143/2002(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 1540 1540 100% 0.0 88%
CY022311.1 Influenza A virus (A/Memphis/104/1976(H3N2)) segment 6, complete sequence 1540 1540 100% 0.0 88%
CY009350.1 Influenza A virus (A/Port Chalmers/73(H3N2)) segment 6, complete sequence 1540 1540 100% 0.0 88%
CY009638.1 Influenza A virus (A/Udorn/72(H3N2)) segment 6, complete sequence 1540 1540 100% 0.0 88%
CY002746.1 Influenza A virus (A/Memphis/109/72(H3N2)) segment 6, complete sequence 1540 1540 100% 0.0 88%
CY002098.1 Influenza A virus (A/Memphis/102/72(H3N2)) segment 6, complete sequence 1540 1540 100% 0.0 88%
CY006837.1 Influenza A virus (A/Memphis/110/76(H3N2)) segment 6, complete sequence 1540 1540 100% 0.0 88%
CY008694.1 Influenza A virus (A/Memphis/106/76(H3N2)) segment 6, complete sequence 1540 1540 100% 0.0 88%
CY008686.1 Influenza A virus (A/Memphis/105/72(H3N2)) segment 6, complete sequence 1540 1540 100% 0.0 88%
CY006885.1 Influenza A virus (A/Memphis/103/76(H3N2)) segment 6, complete sequence 1540 1540 100% 0.0 88%
CY006725.1 Influenza A virus (A/Memphis/137/76(H3N2)) segment 6, complete sequence 1540 1540 100% 0.0 88%
CY008678.1 Influenza A virus (A/Memphis/101/72(H3N2)) segment 6, complete sequence 1534 1534 99% 0.0 88%
AB124661.1 Influenza A virus (A/Kumamoto/55/76(H3N2)) NA gene for neuraminidase, complete cds 1534 1534 99% 0.0 88%
AY210134.1 Influenza A virus (A/Taiwan/1/72(H3N2)) neuraminidase (NA) gene, complete cds 1534 1534 99% 0.0 88%
CY077828.1 Influenza A virus (A/Bilthoven/23337/1972(H3N2)) segment 6 sequence 1532 1532 100% 0.0 88%
GQ161106.1 Influenza A virus (A/swine/Bakum/1832/2000(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 1532 1532 100% 0.0 88%
CY003530.1 Influenza A virus (A/Hong Kong/11/73(H3N2)) segment 6, complete sequence 1532 1532 100% 0.0 88%
CY006813.1 Influenza A virus (A/Memphis/3/73(H3N2)) segment 6, complete sequence 1532 1532 100% 0.0 88%
AJ412693.1 Influenza A virus (A/swine/Italy/2064/99(H1N2) partial NAN1 gene for neuraminidase, genomic RNA 1532 1532 98% 0.0 88%
CY007973.1 Influenza A virus (A/Guandong/243/72(H3N2)) segment 6, complete sequence 1532 1532 100% 0.0 88%
CY006909.1 Influenza A virus (A/Hong Kong/49/74(H3N2)) segment 6, complete sequence 1532 1532 100% 0.0 88%
CY006046.1 Influenza A virus (A/Beijing/39/75(H3N2)) segment 6, complete sequence 1532 1532 100% 0.0 88%
CY008462.1 Influenza A virus (A/Memphis/103/72(H3N2)) segment 6, complete sequence 1530 1530 99% 0.0 88%
EU296608.1 Influenza A virus (A/swine/Saraburi/NIAH13021/2005(H1N2)) neuraminidase (NA) gene, complete cds 1526 1526 99% 0.0 88%
DQ508931.1 Influenza A virus (A/Udorn/307/1972(H3N2)) neuraminidase (NA) gene, complete cds 1526 1526 99% 0.0 88%
AY590828.1 Influenza A virus (A/sw/Gent/108/01(H1N2)) neuraminidase (NA) gene, complete cds 1526 1526 99% 0.0 88%
CY021943.1 Influenza A virus (A/Albany/1/1976(H3N2)) segment 6, complete sequence 1524 1524 100% 0.0 88%
CY021831.1 Influenza A virus (A/Albany/15/1976(H3N2)) segment 6, complete sequence 1524 1524 100% 0.0 88%
CY008702.1 Influenza A virus (A/Memphis/108/76(H3N2)) segment 6, complete sequence 1524 1524 100% 0.0 88%
D00716.1 Influenza A virus (A/sw/Hong Kong/4/1976(H3N2)) gene for neuraminidase, complete cds 1524 1524 100% 0.0 88%
AB434338.1 Influenza A virus (A/swine/Saraburi/NIAH13021/2005(H1N2)) NA gene for neuraminidase, complete cds 1518 1518 99% 0.0 88%
CY009062.1 Influenza A virus (A/Memphis/105/76(H3N2)) segment 6, complete sequence 1518 1518 99% 0.0 88%
AB124659.1 Influenza A virus (A/Memphis/102/72(H3N2)) NA gene for neuraminidase, complete cds 1518 1518 99% 0.0 88%
J02168.1 Influenza A virus (A/udorn/1972(H3N2)) neuraminidase gene, complete cds 1516 1516 100% 0.0 88%
CY020223.1 Influenza A virus (A/Albany/14/1978(H3N2)) segment 6, complete sequence 1509 1509 100% 0.0 88%
CY006829.1 Influenza A virus (A/Memphis/103/74(H3N2)) segment 6, complete sequence 1509 1509 100% 0.0 88%
CY006821.1 Influenza A virus (A/Memphis/102/74(H3N2)) segment 6, complete sequence 1509 1509 100% 0.0 88%
CY006717.1 Influenza A virus (A/Memphis/101/74(H3N2)) segment 6, complete sequence 1509 1509 100% 0.0 88%
AB124660.1 Influenza A virus (A/Tokyo/6/73(H3N2)) NA gene for neuraminidase, complete cds 1503 1503 99% 0.0 88%
CY021079.1 Influenza A virus (A/Albany/42/1975(H3N2)) segment 6, complete sequence 1501 1501 100% 0.0 88%
CY020327.1 Influenza A virus (A/Memphis/16/1978(H3N2)) segment 6, complete sequence 1501 1501 100% 0.0 88%
CY009310.1 Influenza A virus (A/Swine/Wisconsin/194/80(H3N2)) segment 6, complete sequence 1501 1501 100% 0.0 88%
CY006845.1 Influenza A virus (A/Memphis/5/77(H3N2)) segment 6, complete sequence 1501 1501 100% 0.0 88%
CY008125.1 Influenza A virus (A/Memphis/4/77(H3N2)) segment 6, complete sequence 1501 1501 100% 0.0 88%
CY008117.1 Influenza A virus (A/Memphis/2/77(H3N2)) segment 6, complete sequence 1501 1501 100% 0.0 88%
CY007613.1 Influenza A virus (A/Memphis/19/78(H3N2)) segment 6, complete sequence 1501 1501 100% 0.0 88%
CY006741.1 Influenza A virus (A/Memphis/3/77(H3N2)) segment 6, complete sequence 1501 1501 100% 0.0 88%
CY006733.1 Influenza A virus (A/Memphis/1/77(H3N2)) segment 6, complete sequence 1501 1501 100% 0.0 88%
CY006709.1 Influenza A virus (A/Memphis/18/78(H3N2)) segment 6, complete sequence 1501 1501 100% 0.0 88%
CY006701.1 Influenza A virus (A/Memphis/12/78(H3N2)) segment 6, complete sequence 1501 1501 100% 0.0 88%
CY006693.1 Influenza A virus (A/Memphis/2/78(H3N2)) segment 6, complete sequence 1501 1501 100% 0.0 88%
AB124662.1 Influenza A virus (A/Texas/1/77(H3N2)) NA gene for neuraminidase, complete cds 1495 1495 99% 0.0 88%
GU086155.1 Influenza A virus (A/swine/Guangdong/968/2006(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 1493 1493 100% 0.0 88%
GU086131.1 Influenza A virus (A/swine/Guangdong/223/2006(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 1493 1493 100% 0.0 88%
GU086123.1 Influenza A virus (A/swine/Guangdong/211/2006(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 1493 1493 100% 0.0 88%
GQ422398.1 Influenza A virus (A/swine/Guangdong/111/2002(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 1493 1493 100% 0.0 88%
GQ422397.1 Influenza A virus (A/swine/Guangdong/106/2002(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 1493 1493 100% 0.0 88%
GQ422396.1 Influenza A virus (A/swine/Guangdong/102/2002(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 1493 1493 100% 0.0 88%
AJ697881.1 Influenza A virus (A/Duck/Ontario/05/00 (H3N2)) N2 gene for neruaminidase, genomic RNA 1493 1493 100% 0.0 88%
CY009302.1 Influenza A virus (A/Swine/Colorado/1/77(H3N2)) segment 6, complete sequence 1493 1493 100% 0.0 88%
CY077869.1 Influenza A virus (A/Bilthoven/7398/1974(H3N2)) segment 6 sequence 1485 1485 100% 0.0 88%
GQ422400.1 Influenza A virus (A/swine/Guangdong/113/2002(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 1485 1485 100% 0.0 88%
GQ422399.1 Influenza A virus (A/swine/Guangdong/110/2002(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 1485 1485 100% 0.0 88%
GQ161144.1 Influenza A virus (A/swine/Groitzsch/IDT6016-2/2007(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 1485 1485 100% 0.0 88%
GQ161142.1 Influenza A virus (A/swine/Groitzsch/IDT6016-1/2007(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 1485 1485 100% 0.0 88%
AF251389.1 Influenza A virus (A/Swine/Colorado/1/77 (H3N2)) neuraminidase (NA) gene, complete cds 1483 1483 99% 0.0 88%
AJ412694.1 Influenza A virus (A/swine/Cotes d'Armor/799/00(H1N2)) partial NAN2 gene for neuraminidase, genomic RNA 1481 1481 94% 0.0 89%
EU273782.1 Influenza A virus (A/swine/Heilongjiang/1/05(H3N2)) neuraminidase gene, complete cds 1479 1479 99% 0.0 88%
GQ422401.1 Influenza A virus (A/swine/Guangdong/107/2002(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 1477 1477 100% 0.0 88%

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Top 100 PB2 sequences

JF290388.1 Influenza A virus (A/swine/England/1382/2010(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 4520 4520 100% 0.0 100%
CY066670.1 Influenza A virus (A/Cologne/INS286/2009(H1N1)) segment 1, complete sequence 4472 4472 100% 0.0 99%
HM189317.1 Influenza A virus (A/Arkhangelsk/CRIE-GNY/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 4464 4464 100% 0.0 99%
CY063589.1 Influenza A virus (A/Oslo/INS110/2009(H1N1)) segment 1, complete sequence 4464 4464 100% 0.0 99%
CY062802.1 Influenza A virus (A/Hvidovre/INS141/2009(H1N1)) segment 1, complete sequence 4464 4464 100% 0.0 99%
CY054643.1 Influenza A virus (A/Russia/19/2009(H1N1)) segment 1 sequence 4464 4464 100% 0.0 99%
CY053686.1 Influenza A virus (A/Russia/191/2009(H1N1)) segment 1 sequence 4464 4464 100% 0.0 99%
CY072309.1 Influenza A virus (A/Warsaw/INS315/2009(H1N1)) segment 1, complete sequence 4456 4456 100% 0.0 99%
CY071230.1 Influenza A virus (A/Oslo/INS404/2009(H1N1)) segment 1, complete sequence 4456 4456 100% 0.0 99%
CY067014.1 Influenza A virus (A/Munich/INS247/2009(H1N1)) segment 1, complete sequence 4456 4456 100% 0.0 99%
CY066998.1 Influenza A virus (A/Brussels/INS245/2009(H1N1)) segment 1, complete sequence 4456 4456 100% 0.0 99%
CY066974.1 Influenza A virus (A/Aarhus/INS241/2009(H1N1)) segment 1, complete sequence 4456 4456 100% 0.0 99%
GU480807.1 Influenza A virus (A/Hamburg/NY1580/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 4456 4456 100% 0.0 99%
HM101148.1 Influenza A virus (A/Tver/IIV-183/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 4456 4456 100% 0.0 99%
GU562457.1 Influenza A virus (A/Perm/01/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 4456 4456 100% 0.0 99%
CY054667.1 Influenza A virus (A/Russia/171/2009(H1N1)) segment 1 sequence 4456 4456 100% 0.0 99%
CY054635.1 Influenza A virus (A/Russia/12/2009(H1N1)) segment 1 sequence 4456 4456 100% 0.0 99%
CY053741.1 Influenza A virus (A/Russia/190/2009(H1N1)) segment 1 sequence 4456 4456 100% 0.0 99%
CY053733.1 Influenza A virus (A/Russia/178/2009(H1N1)) segment 1 sequence 4456 4456 100% 0.0 99%
GU211242.1 Influenza A virus (A/Omsk/02/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 4456 4456 100% 0.0 99%
CY053782.1 Influenza A virus (A/Norway/2924/2009(H1N1)) segment 1 sequence 4452 4452 99% 0.0 99%
CY083941.1 Influenza A virus (A/Warsaw/INS149/2009(H1N1)) polymerase PB2 (PB2) gene, complete cds 4448 4448 100% 0.0 99%
CY083794.1 Influenza A virus (A/Odense/INS309/2009(H1N1)) polymerase PB2 (PB2) gene, complete cds 4448 4448 100% 0.0 99%
CY073101.1 Influenza A virus (A/Taipei/WRAIR1470T/2009(H1N1)) segment 1 sequence 4448 4448 100% 0.0 99%
CY072445.1 Influenza A virus (A/Athens/INS338/2009(H1N1)) segment 1, complete sequence 4448 4448 100% 0.0 99%
CY072261.1 Influenza A virus (A/Odense/INS308/2009(H1N1)) segment 1, complete sequence 4448 4448 100% 0.0 99%
CY071078.1 Influenza A virus (A/Tallinn/INS373/2010(H1N1)) segment 1, complete sequence 4448 4448 100% 0.0 99%
CY069129.1 Influenza A virus (A/Madrid/INS298/2009(H1N1)) segment 1, complete sequence 4448 4448 100% 0.0 99%
CY067158.1 Influenza A virus (A/Athens/INS270/2009(H1N1)) segment 1, complete sequence 4448 4448 100% 0.0 99%
CY067038.1 Influenza A virus (A/Aarhus/INS251/2009(H1N1)) segment 1, complete sequence 4448 4448 100% 0.0 99%
CY067006.1 Influenza A virus (A/Munich/INS246/2009(H1N1)) segment 1, complete sequence 4448 4448 100% 0.0 99%
CY065863.1 Influenza A virus (A/Netherlands/2229/2009(H1N1)) segment 1, complete sequence 4448 4448 100% 0.0 99%
AB539736.1 Influenza A virus (A/Shanghai/P1/2009(H1N1)) PB2 gene for PB2, complete cds 4448 4448 100% 0.0 99%
HM189349.1 Influenza A virus (A/Lipetsk/CRIE-BVV/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 4448 4448 100% 0.0 99%
CY062666.1 Influenza A virus (A/Athens/INS87/2009(H1N1)) segment 1, complete sequence 4448 4448 100% 0.0 99%
CY056954.1 Influenza A virus (A/Aarhus/INS82/2009(H1N1)) segment 1, complete sequence 4448 4448 100% 0.0 99%
CY054675.1 Influenza A virus (A/Russia/180/2009(H1N1)) segment 1 sequence 4448 4448 100% 0.0 99%
GU371258.1 Influenza A virus (A/Orenburg/IIV2974/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 4448 4448 100% 0.0 99%
CY053725.1 Influenza A virus (A/Russia/74/2009(H1N1)) segment 1 sequence 4448 4448 100% 0.0 99%
CY051995.1 Influenza A virus (A/Norway/3364-2/2009(H1N1)) segment 1 sequence 4448 4448 99% 0.0 99%
CY083909.1 Influenza A virus (A/Athens/INS86/2009(H1N1)) polymerase PB2 (PB2) gene, complete cds 4440 4440 100% 0.0 99%
CY083861.1 Influenza A virus (A/Pensacola/INS39/2009(H1N1)) polymerase PB2 (PB2) gene, complete cds 4440 4440 100% 0.0 99%
CY083341.1 Influenza A virus (A/San Diego/WRAIR1656P/2009(H1N1)) polymerase PB2 (PB2) gene, complete cds 4440 4440 100% 0.0 99%
CY083261.1 Influenza A virus (A/San Diego/WRAIR1643P/2009(H1N1)) polymerase PB2 (PB2) gene, complete cds 4440 4440 100% 0.0 99%
CY074058.1 Influenza A virus (A/Argentina/HNRG8/2009(H1N1)) segment 1 sequence 4440 4440 100% 0.0 99%
CY074040.1 Influenza A virus (A/Argentina/HNRG45/2009(H1N1)) segment 1 sequence 4440 4440 100% 0.0 99%
CY074010.1 Influenza A virus (A/Argentina/HNRG21/2009(H1N1)) segment 1 sequence 4440 4440 100% 0.0 99%
CY074005.1 Influenza A virus (A/Argentina/HNRG15/2009(H1N1)) segment 1 sequence 4440 4440 100% 0.0 99%
CY075571.1 Influenza A virus (A/Boston/655/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY075507.1 Influenza A virus (A/Boston/591/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY075386.1 Influenza A virus (A/Chile/3586/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY075354.1 Influenza A virus (A/Chile/3369/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY075082.1 Influenza A virus (A/Athens/INS416/2010(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY073608.1 Influenza A virus (A/Managua/4451.02/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY073536.1 Influenza A virus (A/Managua/466.01/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY073407.1 Influenza A virus (A/San Diego/WR1639P/2009(H1N1)) segment 1 sequence 4440 4440 100% 0.0 99%
CY073331.1 Influenza A virus (A/San Diego/WR1627P/2009(H1N1)) segment 1 sequence 4440 4440 100% 0.0 99%
CY072965.1 Influenza A virus (A/Managua/585.01/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY072957.1 Influenza A virus (A/Managua/5258.02/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY072933.1 Influenza A virus (A/Managua/4063.01/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY072853.1 Influenza A virus (A/Managua/4702.04/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY072733.1 Influenza A virus (A/Managua/4407.02/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY072669.1 Influenza A virus (A/Managua/2339.03/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY072557.1 Influenza A virus (A/Wroclaw/INS437/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY072405.1 Influenza A virus (A/Athens/INS333/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY072293.1 Influenza A virus (A/Warsaw/INS313/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY072277.1 Influenza A virus (A/Warsaw/INS311/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY071246.1 Influenza A virus (A/Warsaw/INS406/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY071238.1 Influenza A virus (A/Warsaw/INS405/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY071054.1 Influenza A virus (A/New York/NHRC0004/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY071046.1 Influenza A virus (A/New York/NHRC0003/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY071038.1 Influenza A virus (A/New York/NHRC0002/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY071022.1 Influenza A virus (A/Guam/NHRC0032/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY070998.1 Influenza A virus (A/Guam/NHRC0029/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY070990.1 Influenza A virus (A/Guam/NHRC0007/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY070982.1 Influenza A virus (A/Guam/NHRC0006/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY069631.1 Influenza A virus (A/Singapore/478/2009(H1N1)) segment 1 sequence 4440 4440 100% 0.0 99%
HQ011415.1 Influenza A virus (A/Guangdong/45/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 4440 4440 100% 0.0 99%
CY069249.1 Influenza A virus (A/Vienna/INS366/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY069057.1 Influenza A virus (A/Guam/NHRC0021/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY067062.1 Influenza A virus (A/Aarhus/INS254/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY066686.1 Influenza A virus (A/Hvidovre/INS288/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY066654.1 Influenza A virus (A/Bonn/INS279/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY066614.1 Influenza A virus (A/Athens/INS273/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY065871.1 Influenza A virus (A/Netherlands/1493b/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY065831.1 Influenza A virus (A/Netherlands/2243/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY065791.1 Influenza A virus (A/Netherlands/2629/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
HM569698.1 Influenza A virus (A/Argentina/19656/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 4440 4440 100% 0.0 99%
CY065082.1 Influenza A virus (A/New York/7421/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY064643.1 Influenza A virus (A/Boston/134/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY064415.1 Influenza A virus (A/Mexico city/CIA11/2009(H1N1)) segment 1 sequence 4440 4440 100% 0.0 99%
CY064408.1 Influenza A virus (A/Mexico city/CIA10/2009(H1N1)) segment 1 sequence 4440 4440 100% 0.0 99%
HM189309.1 Influenza A virus (A/Chita/CRIE-8/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 4440 4440 100% 0.0 99%
CY063653.1 Influenza A virus (A/Athens/INS154/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY063178.1 Influenza A virus (A/California/VRDL102/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY063002.1 Influenza A virus (A/Tallinn/INS181/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY062986.1 Influenza A virus (A/Bonn/INS178/2010(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY062650.1 Influenza A virus (A/District of Columbia/INS45/2009(H1N1)) segment 1, complete sequence 4440 4440 100% 0.0 99%
CY062537.1 Influenza A virus (A/Mexico city/CIA9/2009(H1N1)) segment 1 sequence 4440 4440 100% 0.0 99%
CY071030.1 Influenza A virus (A/New York/NHRC0001/2009(H1N1)) segment 1, complete sequence 4437 4437 100% 0.0 99%

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Top 100 PB1 sequences

JF290389.1 Influenza A virus (A/swine/England/1382/2010(H1N2)) segment 2 polymerase PB1 (PB1) gene, complete cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence 4508 4508 100% 0.0 100%
CY054801.1 Influenza A virus (A/California/VRDL25/2009(H1N1)) segment 2, complete sequence 4492 4492 100% 0.0 99%
CY054785.1 Influenza A virus (A/California/VRDL22/2009(H1N1)) segment 2, complete sequence 4492 4492 100% 0.0 99%
CY054737.1 Influenza A virus (A/California/VRDL7/2009(H1N1)) segment 2, complete sequence 4492 4492 100% 0.0 99%
CY051061.1 Influenza A virus (A/Wisconsin/629-D02068/2009(H1N1)) segment 2, complete sequence 4492 4492 100% 0.0 99%
CY086999.1 Influenza A virus (A/New York/3251/2009(H1N1)) polymerase PB1 (PB1) gene, complete cds; and PB1-F2 gene, complete sequence 4484 4484 100% 0.0 99%
CY086983.1 Influenza A virus (A/New York/3217/2009(H1N1)) polymerase PB1 (PB1) gene, complete cds; and PB1-F2 gene, complete sequence 4484 4484 100% 0.0 99%
CY086975.1 Influenza A virus (A/New York/3198/2009(H1N1)) polymerase PB1 (PB1) gene, complete cds; and PB1-F2 gene, complete sequence 4484 4484 100% 0.0 99%
CY040723.2 Influenza A virus (A/New York/3238/2009(H1N1)) polymerase PB1 (PB1) gene, complete cds; and PB1-F2 gene, complete sequence 4484 4484 100% 0.0 99%
CY083868.1 Influenza A virus (A/District of Columbia/INS47/2009(H1N1)) polymerase PB1 (PB1) gene, complete cds; and PB1-F2 gene, complete sequence 4484 4484 100% 0.0 99%
CY083844.1 Influenza A virus (A/San Diego/INS14/2009(H1N1)) polymerase PB1 (PB1) gene, complete cds; and PB1-F2 gene, complete sequence 4484 4484 100% 0.0 99%
CY083485.1 Influenza A virus (A/Mexico City/WRAIR1691N/2009(H1N1)) polymerase PB1 (PB1) gene, complete cds; and PB1-F2 gene, complete sequence 4484 4484 100% 0.0 99%
CY083286.1 Influenza A virus (A/San Diego/WRAIR1646P/2009(H1N1)) polymerase PB1 (PB1) gene, complete cds; and PB1-F2 gene, complete sequence 4484 4484 100% 0.0 99%
CY083278.1 Influenza A virus (A/San Diego/WRAIR1645P/2009(H1N1)) polymerase PB1 (PB1) gene, complete cds; and PB1-F2 gene, complete sequence 4484 4484 100% 0.0 99%
CY083238.1 Influenza A virus (A/Virginia/WRAIR1511P/2009(H1N1)) polymerase PB1 (PB1) gene, complete cds; and PB1-F2 gene, complete sequence 4484 4484 100% 0.0 99%
CY083222.1 Influenza A virus (A/California/WRAIR1507P/2009(H1N1)) polymerase PB1 (PB1) gene, complete cds; and PB1-F2 gene, complete sequence 4484 4484 100% 0.0 99%
CY083086.1 Influenza A virus (A/Bogota/WRAIR0442T/2009(H1N1)) polymerase PB1 (PB1) gene, complete cds; and PB1-F2 gene, complete sequence 4484 4484 100% 0.0 99%
CY074059.1 Influenza A virus (A/Argentina/HNRG8/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY073987.1 Influenza A virus (A/Argentina/HNRG106/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
HQ104924.1 Influenza A virus (A/Hamburg/NY1580/2009(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence 4484 4484 100% 0.0 99%
CY075506.1 Influenza A virus (A/Boston/591/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075473.1 Influenza A virus (A/Chile/4438/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075457.1 Influenza A virus (A/Chile/4257/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075425.1 Influenza A virus (A/Chile/3935/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075409.1 Influenza A virus (A/Chile/3819/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075337.1 Influenza A virus (A/Chile/3349/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075321.1 Influenza A virus (A/Chile/3244/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075297.1 Influenza A virus (A/Chile/3123/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075289.1 Influenza A virus (A/Chile/3056/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075281.1 Influenza A virus (A/Chile/3019/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075265.1 Influenza A virus (A/Chile/2911/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075249.1 Influenza A virus (A/Chile/2362/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075241.1 Influenza A virus (A/Chile/2851/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075233.1 Influenza A virus (A/Chile/2239/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075225.1 Influenza A virus (A/Chile/2009/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075217.1 Influenza A virus (A/Chile/1624/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075209.1 Influenza A virus (A/Chile/1603/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075193.1 Influenza A virus (A/Chile/1599/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075169.1 Influenza A virus (A/Chile/180/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075161.1 Influenza A virus (A/Chile/158/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075153.1 Influenza A virus (A/Chile/95/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075145.1 Influenza A virus (A/Chile/88/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075137.1 Influenza A virus (A/Chile/56/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075121.1 Influenza A virus (A/Chile/40/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075113.1 Influenza A virus (A/Chile/36/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY075097.1 Influenza A virus (A/Chile/31/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY053926.2 Influenza A virus (A/Argentina/HNRG3/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY053894.2 Influenza A virus (A/Argentina/HNRG13/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
HM189648.1 Influenza A virus (A/Korea/CJ01/2009(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence 4484 4484 100% 0.0 99%
CY073408.1 Influenza A virus (A/San Diego/WR1639P/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY072924.1 Influenza A virus (A/Managua/4972.02/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY072772.1 Influenza A virus (A/Managua/287.01/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY072740.1 Influenza A virus (A/Managua/1419.02/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY072732.1 Influenza A virus (A/Managua/4407.02/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY072444.1 Influenza A virus (A/Athens/INS338/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY072404.1 Influenza A virus (A/Athens/INS333/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY069632.1 Influenza A virus (A/Singapore/478/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
HQ011416.1 Influenza A virus (A/Guangdong/45/2009(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence 4484 4484 100% 0.0 99%
CY069072.1 Influenza A virus (A/Guam/NHRC0023/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY069032.1 Influenza A virus (A/Guam/NHRC0018/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY066749.1 Influenza A virus (A/Brussels/INS209/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY066741.1 Influenza A virus (A/Brussels/INS208/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY066645.1 Influenza A virus (A/Bonn/INS278/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY066549.1 Influenza A virus (A/San Diego/INS197/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY066533.1 Influenza A virus (A/San Diego/INS193/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY066213.1 Influenza A virus (A/California/VRDL104/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY066189.1 Influenza A virus (A/Boston/144/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY065822.1 Influenza A virus (A/Netherlands/2442b/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY065790.1 Influenza A virus (A/Netherlands/2629/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY065768.1 Influenza A virus (A/Canada/GFA0402/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY065760.1 Influenza A virus (A/British Columbia/GFA0401/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY064730.1 Influenza A virus (A/Mexico City/022/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY064722.1 Influenza A virus (A/Mexico City/021/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY064714.1 Influenza A virus (A/Mexico City/020/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY064706.1 Influenza A virus (A/Mexico City/019/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY064682.1 Influenza A virus (A/Boston/141/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY064594.1 Influenza A virus (A/Boston/127/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY064554.1 Influenza A virus (A/Boston/122/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY064514.1 Influenza A virus (A/Boston/116/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY064416.1 Influenza A virus (A/Mexico city/CIA11/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY064409.1 Influenza A virus (A/Mexico city/CIA10/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY063572.1 Influenza A virus (A/Boston/153/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY063516.1 Influenza A virus (A/Boston/145/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY063500.1 Influenza A virus (A/Boston/112/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY062721.1 Influenza A virus (A/Athens/INS124/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY062665.1 Influenza A virus (A/Athens/INS87/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY062515.1 Influenza A virus (A/Mexico city/CIA5/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY062489.1 Influenza A virus (A/Mexico city/CIA1/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY062232.1 Influenza A virus (A/California/VRDL83/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY061049.1 Influenza A virus (A/Texas/JMS391/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY061009.1 Influenza A virus (A/Texas/JMS386/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY060897.1 Influenza A virus (A/Texas/JMS364/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY060676.1 Influenza A virus (A/Ontario/315107/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY060644.1 Influenza A virus (A/Ontario/314603/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY060612.1 Influenza A virus (A/Ontario/309862/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY060564.1 Influenza A virus (A/Ontario/296008/2009(H1N1)) segment 2 sequence 4484 4484 100% 0.0 99%
CY058698.1 Influenza A virus (A/Texas/461917783/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY058666.1 Influenza A virus (A/Wisconsin/629-D01913/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY058650.1 Influenza A virus (A/Wisconsin/629-D02329/2009(H1N1)) segment 2, complete sequence 4484 4484 100% 0.0 99%
CY064786.1 Influenza A virus (A/Barcelona/INS190/2009(H1N1)) segment 2, complete sequence 4480 4480 100% 0.0 99%

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Top 100 PA sequences

JF290390.1 Influenza A virus (A/swine/England/1382/2010(H1N2)) segment 3 polymerase PA (PA) gene, complete cds 4261 4261 100% 0.0 100%
CY064673.1 Influenza A virus (A/Boston/140/2009(H1N1)) segment 3, complete sequence 4253 4253 100% 0.0 99%
CY087005.1 Influenza A virus (A/New York/3256/2009(N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY086998.1 Influenza A virus (A/New York/3251/2009(H1N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY086974.1 Influenza A virus (A/New York/3198/2009(H1N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY040722.2 Influenza A virus (A/New York/3238/2009(H1N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY083891.1 Influenza A virus (A/San Diego/INS72/2009(H1N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY083718.1 Influenza A virus (A/Madrid/INS112/2009(H1N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY083486.1 Influenza A virus (A/Mexico City/WRAIR1691N/2009(H1N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY083422.1 Influenza A virus (A/San Diego/WRAIR1667P/2009(H1N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY083366.1 Influenza A virus (A/South Carolina/WRAIR1660P/2009(H1N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY083358.1 Influenza A virus (A/San Diego/WRAIR1658P/2009(H1N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY083350.1 Influenza A virus (A/San Diego/WRAIR1657P/2009(H1N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY083311.1 Influenza A virus (A/San Diego/WRAIR1649P/2009(H1N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY083239.1 Influenza A virus (A/Virginia/WRAIR1511P/2009(H1N1)) polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY074022.1 Influenza A virus (A/Argentina/HNRG32/2009(H1N1)) segment 3 sequence 4246 4246 100% 0.0 99%
CY075665.1 Influenza A virus (A/Boston/628/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075609.1 Influenza A virus (A/Boston/681/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075593.1 Influenza A virus (A/Boston/666/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075537.1 Influenza A virus (A/Boston/612/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075472.1 Influenza A virus (A/Chile/4438/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075464.1 Influenza A virus (A/Chile/4406/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075448.1 Influenza A virus (A/Chile/4182/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075440.1 Influenza A virus (A/Chile/4181/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075416.1 Influenza A virus (A/Chile/3905/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075392.1 Influenza A virus (A/Chile/3760/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075368.1 Influenza A virus (A/Chile/3467/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075344.1 Influenza A virus (A/Chile/3361/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075296.1 Influenza A virus (A/Chile/3123/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075288.1 Influenza A virus (A/Chile/3056/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075272.1 Influenza A virus (A/Chile/2994/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075264.1 Influenza A virus (A/Chile/2911/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075240.1 Influenza A virus (A/Chile/2851/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075232.1 Influenza A virus (A/Chile/2239/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075224.1 Influenza A virus (A/Chile/2009/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075216.1 Influenza A virus (A/Chile/1624/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075208.1 Influenza A virus (A/Chile/1603/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075200.1 Influenza A virus (A/Chile/1600/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075184.1 Influenza A virus (A/Chile/1598/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075168.1 Influenza A virus (A/Chile/180/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075160.1 Influenza A virus (A/Chile/158/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075152.1 Influenza A virus (A/Chile/95/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075144.1 Influenza A virus (A/Chile/88/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075136.1 Influenza A virus (A/Chile/56/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075088.1 Influenza A virus (A/Chile/28/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY075013.1 Influenza A virus (A/Thailand/CU-H910/2009(H1N1)) segment 3 sequence 4246 4246 100% 0.0 99%
CY074973.1 Influenza A virus (A/Thailand/CU-C161/2009(H1N1)) segment 3 sequence 4246 4246 100% 0.0 99%
CY073417.1 Influenza A virus (A/San Diego/WR1640P/2009(H1N1)) segment 3 sequence 4246 4246 100% 0.0 99%
CY073409.1 Influenza A virus (A/San Diego/WR1639P/2009(H1N1)) segment 3 sequence 4246 4246 100% 0.0 99%
CY073253.1 Influenza A virus (A/Athens/WRAIR2962N/2009(H1N1)) segment 3 sequence 4246 4246 100% 0.0 99%
CY072787.1 Influenza A virus (A/Managua/5401.01/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY072731.1 Influenza A virus (A/Managua/4407.02/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY071473.1 Influenza A virus (A/California/WR1313P/2009(H1N1)) segment 3 sequence 4246 4246 100% 0.0 99%
CY071052.1 Influenza A virus (A/New York/NHRC0004/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY071044.1 Influenza A virus (A/New York/NHRC0003/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY069111.1 Influenza A virus (A/Guam/NHRC0028/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY069087.1 Influenza A virus (A/Guam/NHRC0025/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY068919.1 Influenza A virus (A/Japan/NHRC0003/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
HM849037.1 Influenza A virus (A/Kurume/K0910/2009(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY067020.1 Influenza A virus (A/Bochum/INS249/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY066828.1 Influenza A virus (A/Antwerp/INS221/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY065965.1 Influenza A virus (A/Japan/NHRC0002/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY065761.1 Influenza A virus (A/British Columbia/GFA0401/2009(H1N1)) segment 3 sequence 4246 4246 100% 0.0 99%
CY064900.1 Influenza A virus (A/Boston/136/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064737.1 Influenza A virus (A/Mexico City/023/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064729.1 Influenza A virus (A/Mexico City/022/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064721.1 Influenza A virus (A/Mexico City/021/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064713.1 Influenza A virus (A/Mexico City/020/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064705.1 Influenza A virus (A/Mexico City/019/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064657.1 Influenza A virus (A/Boston/137/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064649.1 Influenza A virus (A/Boston/135/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064601.1 Influenza A virus (A/Boston/129/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064593.1 Influenza A virus (A/Boston/127/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064577.1 Influenza A virus (A/Boston/125/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064521.1 Influenza A virus (A/Boston/117/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064505.1 Influenza A virus (A/Boston/115/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064497.1 Influenza A virus (A/Boston/109/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064481.1 Influenza A virus (A/Boston/106/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY064473.1 Influenza A virus (A/Boston/103/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY063539.1 Influenza A virus (A/Boston/148/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY063507.1 Influenza A virus (A/Boston/113/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY063491.1 Influenza A virus (A/Boston/110/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY062640.1 Influenza A virus (A/Mexico City/014/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY062497.1 Influenza A virus (A/Mexico city/CIA2/2009(H1N1)) segment 3 sequence 4246 4246 100% 0.0 99%
HM173604.1 Influenza A virus (A/Blagovechensk/01/2009(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY061567.1 Influenza A virus (A/Texas/JMS367/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY060741.1 Influenza A virus (A/Ontario/9698/2009(H1N1)) segment 3 sequence 4246 4246 100% 0.0 99%
CY060733.1 Influenza A virus (A/Ontario/35273/2009(H1N1)) segment 3 sequence 4246 4246 100% 0.0 99%
CY058665.1 Influenza A virus (A/Wisconsin/629-D01913/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY058649.1 Influenza A virus (A/Wisconsin/629-D02329/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY058265.1 Influenza A virus (A/Managua/164.01/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY058035.1 Influenza A virus (A/Wisconsin/629-D00636/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY057891.1 Influenza A virus (A/Wisconsin/629-D00533/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY057395.1 Influenza A virus (A/Wisconsin/629-D00036/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY056576.1 Influenza A virus (A/New York/5755/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY055650.1 Influenza A virus (A/Australia/26/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY055468.1 Influenza A virus (A/California/VRDL14/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
CY055420.1 Influenza A virus (A/Wisconsin/629-D00809/2009(H1N1)) segment 3, complete sequence 4246 4246 100% 0.0 99%
GU562455.1 Influenza A virus (A/Perm/01/2009(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 4246 4246 100% 0.0 99%
CY072891.1 Influenza A virus (A/Managua/12.01/2009(H1N1)) segment 3, complete sequence 4242 4242 100% 0.0 99%

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Top 100 NP sequences

JF290392.1 Influenza A virus (A/swine/England/1382/2010(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 3003 3003 100% 0.0 100%
CY072553.1 Influenza A virus (A/Wroclaw/INS437/2009(H1N1)) segment 5, complete sequence 2995 2995 100% 0.0 99%
CY065787.1 Influenza A virus (A/Netherlands/2629/2009(H1N1)) segment 5, complete sequence 2995 2995 100% 0.0 99%
CY065118.1 Influenza A virus (A/Netherlands/2464b/2009(H1N1)) segment 5, complete sequence 2995 2995 100% 0.0 99%
CY087011.1 Influenza A virus (A/New York/3565/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY086972.1 Influenza A virus (A/New York/3198/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY084449.1 Influenza A virus (A/New York/6902/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY083716.1 Influenza A virus (A/Madrid/INS112/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY083664.1 Influenza A virus (A/San Diego/INS41/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY083650.1 Influenza A virus (A/District of Columbia/INS22/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY081545.1 Influenza A virus (A/Cambodia/NHRCC00008/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY081537.1 Influenza A virus (A/Cambodia/NHRCC00007/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY081529.1 Influenza A virus (A/Cambodia/NHRCC00006/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY081521.1 Influenza A virus (A/Cambodia/NHRCC00005/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY081513.1 Influenza A virus (A/Cambodia/NHRCC00004/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY081505.1 Influenza A virus (A/Cambodia/NHRCC00003/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY081497.1 Influenza A virus (A/Cambodia/NHRCC00002/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY081489.1 Influenza A virus (A/Cambodia/NHRCC00001/2009(H1N1)) nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY075655.1 Influenza A virus (A/Boston/617/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY075639.1 Influenza A virus (A/Boston/703/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY075615.1 Influenza A virus (A/Boston/682/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY075559.1 Influenza A virus (A/Boston/653/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY075551.1 Influenza A virus (A/Boston/648/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY075543.1 Influenza A virus (A/Boston/634/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY075382.1 Influenza A virus (A/Chile/3586/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY075358.1 Influenza A virus (A/Chile/3375/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY075350.1 Influenza A virus (A/Chile/3369/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY075302.1 Influenza A virus (A/Chile/3220/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
HM189541.1 Influenza A virus (A/Korea/CJ112/2009(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
HM189537.1 Influenza A virus (A/Korea/CJ40/2009(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
HM189534.1 Influenza A virus (A/Korea/CJ15/2009(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
HM189533.1 Influenza A virus (A/Korea/CJ09/2009(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
HM189532.1 Influenza A virus (A/Korea/CJ04/2009(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY072929.1 Influenza A virus (A/Managua/4063.01/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY072889.1 Influenza A virus (A/Managua/12.01/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY072721.1 Influenza A virus (A/Managua/3359.01/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY072665.1 Influenza A virus (A/Managua/2339.03/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY072657.1 Influenza A virus (A/Managua/4570.01/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY072337.1 Influenza A virus (A/Newark/INS319/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY072289.1 Influenza A virus (A/Warsaw/INS313/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY072273.1 Influenza A virus (A/Warsaw/INS311/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY071370.1 Influenza A virus (A/Newark/INS429/2010(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY071314.1 Influenza A virus (A/Athens/INS420/2010(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY071298.1 Influenza A virus (A/Athens/INS417/2010(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY071130.1 Influenza A virus (A/Athens/INS383/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY071050.1 Influenza A virus (A/New York/NHRC0004/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY071042.1 Influenza A virus (A/New York/NHRC0003/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY071026.1 Influenza A virus (A/New York/NHRC0001/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY071010.1 Influenza A virus (A/Guam/NHRC0031/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY070994.1 Influenza A virus (A/Guam/NHRC0029/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY070986.1 Influenza A virus (A/Guam/NHRC0007/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY070978.1 Influenza A virus (A/Guam/NHRC0006/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY069642.1 Influenza A virus (A/Singapore/527/2009(H1N1)) segment 5 sequence 2987 2987 100% 0.0 99%
CY069620.1 Influenza A virus (A/Singapore/276/2009(H1N1)) segment 5 sequence 2987 2987 100% 0.0 99%
CY069101.1 Influenza A virus (A/Guam/NHRC0027/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY069077.1 Influenza A virus (A/Guam/NHRC0024/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY069053.1 Influenza A virus (A/Guam/NHRC0021/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY069045.1 Influenza A virus (A/Guam/NHRC0020/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY069029.1 Influenza A virus (A/Guam/NHRC0018/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY068981.1 Influenza A virus (A/Guam/NHRC0012/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY068949.1 Influenza A virus (A/Japan/NHRC0004/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY068941.1 Influenza A virus (A/Guam/NHRC0008/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY068933.1 Influenza A virus (A/Guam/NHRC0005/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY068917.1 Influenza A virus (A/Japan/NHRC0003/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY067654.1 Influenza A virus (A/Brussels/INS244/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY066994.1 Influenza A virus (A/Brussels/INS245/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY066938.1 Influenza A virus (A/Aarhus/INS236/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY066898.1 Influenza A virus (A/District of Columbia/INS231/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY066874.1 Influenza A virus (A/District of Columbia/INS228/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY066858.1 Influenza A virus (A/District of Columbia/INS226/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY066842.1 Influenza A virus (A/Madrid/INS223/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY066690.1 Influenza A virus (A/Hvidovre/INS289/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY066642.1 Influenza A virus (A/Bonn/INS278/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY066210.1 Influenza A virus (A/California/VRDL104/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY066186.1 Influenza A virus (A/Boston/144/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY065963.1 Influenza A virus (A/Japan/NHRC0002/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY065955.1 Influenza A virus (A/Japan/NHRC0001/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY065939.1 Influenza A virus (A/Guam/NHRC0002/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY065875.1 Influenza A virus (A/Netherlands/2631b/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY065827.1 Influenza A virus (A/Netherlands/2243/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY065078.1 Influenza A virus (A/New York/7421/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY065046.1 Influenza A virus (A/New York/4294/2010(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY064898.1 Influenza A virus (A/Boston/136/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY064775.1 Influenza A virus (A/Berlin/INS170/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY064679.1 Influenza A virus (A/Boston/141/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY064639.1 Influenza A virus (A/Boston/134/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY064559.1 Influenza A virus (A/Boston/123/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY064551.1 Influenza A virus (A/Boston/122/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY064463.1 Influenza A virus (A/Boston/96/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
HM241704.1 Influenza A virus (A/Jalna/NIV9436/2009(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 2987 2987 100% 0.0 99%
CY063585.1 Influenza A virus (A/Oslo/INS110/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY063561.1 Influenza A virus (A/Boston/152/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY063545.1 Influenza A virus (A/Boston/149/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY063513.1 Influenza A virus (A/Boston/145/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY063497.1 Influenza A virus (A/Boston/112/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY063262.1 Influenza A virus (A/Wisconsin/629-D00740/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY063222.1 Influenza A virus (A/Wisconsin/629-D01351/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY063094.1 Influenza A virus (A/California/VRDL90/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY063086.1 Influenza A virus (A/California/VRDL89/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%
CY063022.1 Influenza A virus (A/Madrid/INS184/2009(H1N1)) segment 5, complete sequence 2987 2987 100% 0.0 99%

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Top 100 MP sequences

JF290394.1 Influenza A virus (A/swine/England/1382/2010(H1N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1947 1947 100% 0.0 100%
CY083903.1 Influenza A virus (A/Athens/INS86/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1931 1931 100% 0.0 99%
CY083788.1 Influenza A virus (A/Odense/INS309/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1931 1931 100% 0.0 99%
CY083707.1 Influenza A virus (A/Oslo/INS111/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1931 1931 100% 0.0 99%
CY073878.1 Influenza A virus (A/Athens/INS323/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY073091.1 Influenza A virus (A/Ankara/WRAIR1435T/2009(H1N1)) segment 7 sequence 1931 1931 100% 0.0 99%
CY072439.1 Influenza A virus (A/Athens/INS338/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY072399.1 Influenza A virus (A/Athens/INS333/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY072303.1 Influenza A virus (A/Warsaw/INS315/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY072255.1 Influenza A virus (A/Odense/INS308/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY071224.1 Influenza A virus (A/Oslo/INS404/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY067845.1 Influenza A virus (A/Lisboa/64/2009(H1N1)) segment 7 sequence 1931 1931 100% 0.0 99%
CY067652.1 Influenza A virus (A/Brussels/INS244/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY067160.1 Influenza A virus (A/Athens/INS276/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY067128.1 Influenza A virus (A/Athens/INS267/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY067032.1 Influenza A virus (A/Aarhus/INS251/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY066968.1 Influenza A virus (A/Aarhus/INS241/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY066664.1 Influenza A virus (A/Cologne/INS286/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY065841.1 Influenza A virus (A/Netherlands/2636/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY065825.1 Influenza A virus (A/Netherlands/2243/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY065785.1 Influenza A virus (A/Netherlands/2629/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY065116.1 Influenza A virus (A/Netherlands/2464b/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
HM189323.1 Influenza A virus (A/Arkhangelsk/CRIE-GNY/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1931 1931 100% 0.0 99%
HM189355.1 Influenza A virus (A/Lipetsk/CRIE-BVV/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1931 1931 100% 0.0 99%
CY062996.1 Influenza A virus (A/Tallinn/INS181/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY062796.1 Influenza A virus (A/Hvidovre/INS141/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY062788.1 Influenza A virus (A/Hvidovre/INS139/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY062732.1 Influenza A virus (A/Athens/INS126/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY062708.1 Influenza A virus (A/Athens/INS123/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
CY062660.1 Influenza A virus (A/Athens/INS87/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
HM104479.1 Influenza A virus (A/Yaroslavl/IIV-198/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1931 1931 100% 0.0 99%
HM101152.1 Influenza A virus (A/Tver/IIV-183/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1931 1931 100% 0.0 99%
CY056956.1 Influenza A virus (A/Athens/INS85/2009(H1N1)) segment 7, complete sequence 1931 1931 100% 0.0 99%
GU727831.1 Influenza A virus (A/IIV-Anadyr/177/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1931 1931 100% 0.0 99%
GU592906.1 Influenza A virus (A/Magadan/02/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1931 1931 100% 0.0 99%
GU562451.1 Influenza A virus (A/Perm/01/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1931 1931 100% 0.0 99%
CY054673.1 Influenza A virus (A/Russia/171/2009(H1N1)) segment 7 sequence 1931 1931 100% 0.0 99%
CY054633.1 Influenza A virus (A/Russia/4/2009(H1N1)) segment 7 sequence 1931 1931 100% 0.0 99%
GU371267.1 Influenza A virus (A/Bryansk/IIV2971/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1931 1931 100% 0.0 99%
GU371261.1 Influenza A virus (A/Orenburg/IIV2974/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1931 1931 100% 0.0 99%
CY053739.1 Influenza A virus (A/Russia/178/2009(H1N1)) segment 7 sequence 1931 1931 100% 0.0 99%
CY053692.1 Influenza A virus (A/Russia/191/2009(H1N1)) segment 7 sequence 1931 1931 100% 0.0 99%
CY053684.1 Influenza A virus (A/Russia/14/2009(H1N1)) segment 7 sequence 1931 1931 100% 0.0 99%
CY065865.1 Influenza A virus (A/Netherlands/1493b/2009(H1N1)) segment 7, complete sequence 1927 1927 100% 0.0 99%
CY083935.1 Influenza A virus (A/Warsaw/INS149/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1923 1923 100% 0.0 99%
CY083919.1 Influenza A virus (A/Warsaw/INS147/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1923 1923 100% 0.0 99%
CY083777.1 Influenza A virus (A/Aalborg/INS282/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1923 1923 100% 0.0 99%
CY067665.1 Influenza A virus (A/swine/Italy/116114/2010(H1N2)) segment 7 sequence 1923 1923 100% 0.0 99%
CY075076.1 Influenza A virus (A/Athens/INS416/2010(H1N1)) segment 7, complete sequence 1923 1923 100% 0.0 99%
CY073750.1 Influenza A virus (A/Copenhagen/INS434/2009(H1N1)) segment 7, complete sequence 1923 1923 100% 0.0 99%
CY072551.1 Influenza A virus (A/Wroclaw/INS437/2009(H1N1)) segment 7, complete sequence 1923 1923 100% 0.0 99%
CY072287.1 Influenza A virus (A/Warsaw/INS313/2009(H1N1)) segment 7, complete sequence 1923 1923 100% 0.0 99%
CY072279.1 Influenza A virus (A/Warsaw/INS312/2009(H1N1)) segment 7, complete sequence 1923 1923 100% 0.0 99%
CY071240.1 Influenza A virus (A/Warsaw/INS406/2009(H1N1)) segment 7, complete sequence 1923 1923 100% 0.0 99%
CY071232.1 Influenza A virus (A/Warsaw/INS405/2009(H1N1)) segment 7, complete sequence 1923 1923 100% 0.0 99%
CY071072.1 Influenza A virus (A/Tallinn/INS373/2010(H1N1)) segment 7, complete sequence 1923 1923 100% 0.0 99%
CY067152.1 Influenza A virus (A/Athens/INS270/2009(H1N1)) segment 7, complete sequence 1923 1923 100% 0.0 99%
CY066648.1 Influenza A virus (A/Bonn/INS279/2009(H1N1)) segment 7, complete sequence 1923 1923 100% 0.0 99%
HM569743.1 Influenza A virus (A/Orenburg/IIV-13/2010(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1923 1923 100% 0.0 99%
CY063647.1 Influenza A virus (A/Athens/INS154/2009(H1N1)) segment 7, complete sequence 1923 1923 100% 0.0 99%
HM124386.1 Influenza A virus (A/Orenburg/IIV-13/2010(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1923 1923 100% 0.0 99%
CY056948.1 Influenza A virus (A/Aarhus/INS82/2009(H1N1)) segment 7, complete sequence 1923 1923 100% 0.0 99%
CY054681.1 Influenza A virus (A/Russia/180/2009(H1N1)) segment 7 sequence 1923 1923 100% 0.0 99%
CY054641.1 Influenza A virus (A/Russia/12/2009(H1N1)) segment 7 sequence 1923 1923 100% 0.0 99%
GU367328.1 Influenza A virus (A/Salekhard/01/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1923 1923 100% 0.0 99%
CY053787.1 Influenza A virus (A/Norway/2924/2009(H1N1)) segment 7 sequence 1923 1923 100% 0.0 99%
CY053731.1 Influenza A virus (A/Russia/74/2009(H1N1)) segment 7 sequence 1923 1923 100% 0.0 99%
CY053419.1 Influenza A virus (A/Russia/149/2009(H1N1)) segment 7 sequence 1923 1923 100% 0.0 99%
CY083083.1 Influenza A virus (A/Bogota/WRAIR0440T/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 1915 1915 100% 0.0 99%
CY073742.1 Influenza A virus (A/Copenhagen/INS433/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY073107.1 Influenza A virus (A/Taipei/WRAIR1470T/2009(H1N1)) segment 7 sequence 1915 1915 100% 0.0 99%
CY072271.1 Influenza A virus (A/Warsaw/INS311/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY071272.1 Influenza A virus (A/Athens/INS412/2010(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY067824.1 Influenza A virus (A/Lisboa/57/2009(H1N1)) segment 7 sequence 1915 1915 100% 0.0 99%
CY067773.1 Influenza A virus (A/Lisboa/120/2009(H1N1)) segment 7 sequence 1915 1915 100% 0.0 99%
CY067008.1 Influenza A virus (A/Munich/INS247/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY067000.1 Influenza A virus (A/Munich/INS246/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY066688.1 Influenza A virus (A/Hvidovre/INS289/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY066344.1 Influenza A virus (A/California/VRDL121/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY065897.1 Influenza A virus (A/Netherlands/2822/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY065857.1 Influenza A virus (A/Netherlands/2229/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY065833.1 Influenza A virus (A/Netherlands/2457b/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY063308.1 Influenza A virus (A/Wisconsin/629-D01572/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY063172.1 Influenza A virus (A/California/VRDL102/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY062980.1 Influenza A virus (A/Bonn/INS178/2010(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY062820.1 Influenza A virus (A/Copenhagen/INS144/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY062692.1 Influenza A virus (A/Aarhus/INS116/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY061947.1 Influenza A virus (A/New York/6943/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY061004.1 Influenza A virus (A/Texas/JMS386/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY060537.1 Influenza A virus (A/Ontario/237882/2009(H1N1)) segment 7 sequence 1915 1915 100% 0.0 99%
CY058341.1 Influenza A virus (A/Wisconsin/629-D00503/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY057879.1 Influenza A virus (A/Wisconsin/629-D01987/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY057863.1 Influenza A virus (A/Wisconsin/629-D00936/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY057847.1 Influenza A virus (A/Wisconsin/629-D02060/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY057735.1 Influenza A virus (A/Wisconsin/629-D01140/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY057655.1 Influenza A virus (A/Wisconsin/629-D00544/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY057623.1 Influenza A virus (A/Wisconsin/629-S1313/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY057575.1 Influenza A virus (A/Wisconsin/629-S1252/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY057255.1 Influenza A virus (A/New York/5186/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%
CY056988.1 Influenza A virus (A/Warsaw/INS100/2009(H1N1)) segment 7, complete sequence 1915 1915 100% 0.0 99%

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Top 100 NS sequences

JF290395.1 Influenza A virus (A/swine/England/1382/2010(H1N2)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1661 1661 100% 0.0 100%
CY083922.1 Influenza A virus (A/Warsaw/INS147/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1645 1645 100% 0.0 99%
CY083780.1 Influenza A virus (A/Aalborg/INS282/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1645 1645 100% 0.0 99%
CY083709.1 Influenza A virus (A/Oslo/INS111/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1645 1645 100% 0.0 99%
CY073745.1 Influenza A virus (A/Copenhagen/INS433/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
CY073108.1 Influenza A virus (A/Taipei/WRAIR1470T/2009(H1N1)) segment 8 sequence 1645 1645 100% 0.0 99%
CY073092.1 Influenza A virus (A/Ankara/WRAIR1435T/2009(H1N1)) segment 8 sequence 1645 1645 100% 0.0 99%
CY071430.1 Influenza A virus (A/Ashgabat/WR0865N/2009(H1N1)) segment 8 sequence 1645 1645 100% 0.0 99%
CY071227.1 Influenza A virus (A/Oslo/INS404/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
HM855262.1 Influenza A virus (A/Eldoret/119/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1645 1645 100% 0.0 99%
CY067059.1 Influenza A virus (A/Aarhus/INS254/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
CY067011.1 Influenza A virus (A/Munich/INS247/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
CY066995.1 Influenza A virus (A/Brussels/INS245/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
CY066667.1 Influenza A virus (A/Cologne/INS286/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
CY065868.1 Influenza A virus (A/Netherlands/1493b/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
CY065812.1 Influenza A virus (A/Netherlands/1715b/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
HM189324.1 Influenza A virus (A/Arkhangelsk/CRIE-GNY/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1645 1645 100% 0.0 99%
HM189356.1 Influenza A virus (A/Lipetsk/CRIE-BVV/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1645 1645 100% 0.0 99%
CY062999.1 Influenza A virus (A/Tallinn/INS181/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
CY062983.1 Influenza A virus (A/Bonn/INS178/2010(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
CY062791.1 Influenza A virus (A/Hvidovre/INS139/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
CY062695.1 Influenza A virus (A/Aarhus/INS116/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
CY062663.1 Influenza A virus (A/Athens/INS87/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
HM173603.1 Influenza A virus (A/Blagovechensk/01/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1645 1645 100% 0.0 99%
CY057258.1 Influenza A virus (A/New York/5186/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
CY056983.1 Influenza A virus (A/Copenhagen/INS98/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
CY056951.1 Influenza A virus (A/Aarhus/INS82/2009(H1N1)) segment 8, complete sequence 1645 1645 100% 0.0 99%
GU562454.1 Influenza A virus (A/Perm/01/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1645 1645 100% 0.0 99%
CY054650.1 Influenza A virus (A/Russia/19/2009(H1N1)) segment 8 sequence 1645 1645 100% 0.0 99%
GU451260.1 Influenza A virus (A/Tver/IIV2969/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1645 1645 100% 0.0 99%
CY053788.1 Influenza A virus (A/Norway/2924/2009(H1N1)) segment 8 sequence 1645 1645 100% 0.0 99%
CY053693.1 Influenza A virus (A/Russia/191/2009(H1N1)) segment 8 sequence 1645 1645 100% 0.0 99%
CY052002.1 Influenza A virus (A/Norway/3364-2/2009(H1N1)) segment 8 sequence 1645 1645 100% 0.0 99%
GU211239.1 Influenza A virus (A/Omsk/02/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1645 1645 100% 0.0 99%
CY047748.1 Influenza A virus (A/Taiwan/526/2009(H1N1)) segment 8 sequence 1645 1645 100% 0.0 99%
GQ527171.1 Influenza A virus (A/Omsk/01/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1645 1645 100% 0.0 99%
JF327345.1 Influenza A virus (A/Finland/688/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1643 1643 99% 0.0 99%
JF327343.1 Influenza A virus (A/Finland/649/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1643 1643 99% 0.0 99%
CY063586.1 Influenza A virus (A/Oslo/INS110/2009(H1N1)) segment 8, complete sequence 1641 1641 100% 0.0 99%
CY087020.1 Influenza A virus (A/New York/4764/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY087012.1 Influenza A virus (A/New York/3565/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY086997.1 Influenza A virus (A/New York/3251/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY086973.1 Influenza A virus (A/New York/3198/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY086952.1 Influenza A virus (A/swine/Thailand/CU-M8_2/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY040721.2 Influenza A virus (A/New York/3238/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY084466.1 Influenza A virus (A/New York/6537/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083946.1 Influenza A virus (A/San Diego/INS194/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083938.1 Influenza A virus (A/Warsaw/INS149/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083930.1 Influenza A virus (A/Warsaw/INS148/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083874.1 Influenza A virus (A/San Diego/INS49/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083834.1 Influenza A virus (A/San Diego/INS07/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083801.1 Influenza A virus (A/Berlin/INS362/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083791.1 Influenza A virus (A/Odense/INS309/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083757.1 Influenza A virus (A/Brussels/INS205/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083694.1 Influenza A virus (A/Terrassa/INS94/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083665.1 Influenza A virus (A/San Diego/INS41/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083635.1 Influenza A virus (A/Arequipa/WRAIR9939F/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083491.1 Influenza A virus (A/Mexico City/WRAIR1691N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083443.1 Influenza A virus (A/Ft.Benning/WRAIR1669P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083411.1 Influenza A virus (A/San Diego/WRAIR1665P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083395.1 Influenza A virus (A/San Diego/WRAIR1663P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083387.1 Influenza A virus (A/San Diego/WRAIR1662P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083379.1 Influenza A virus (A/Pendleton/WRAIR1661P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083371.1 Influenza A virus (A/South Carolina/WRAIR1660P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083348.1 Influenza A virus (A/San Diego/WRAIR1656P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083284.1 Influenza A virus (A/San Diego/WRAIR1645P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083260.1 Influenza A virus (A/San Diego/WRAIR1642P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083204.1 Influenza A virus (A/South Carolina/WRAIR1503P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083188.1 Influenza A virus (A/South Carolina/WRAIR1501P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083180.1 Influenza A virus (A/South Carolina/WRAIR1500P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083124.1 Influenza A virus (A/Quito/WRAIR0617T/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083060.1 Influenza A virus (A/Colorado/WRAIR0353S/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY083052.1 Influenza A virus (A/Lima/WRAIR0285F/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY081530.1 Influenza A virus (A/Cambodia/NHRCC00006/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY050371.1 Influenza A virus (A/Korea/S1/2009(H1N1)) segment 8 sequence 1637 1637 100% 0.0 99%
HQ840321.1 Influenza A virus (A/swine/Minnesota/165A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
HQ840313.1 Influenza A virus (A/swine/Minnesota/136B/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
HQ840308.1 Influenza A virus (A/swine/Minnesota/130A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
HQ840294.1 Influenza A virus (A/swine/Minnesota/074A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1637 1637 100% 0.0 99%
CY074044.1 Influenza A virus (A/Argentina/HNRG45/2009(H1N1)) segment 8 sequence 1637 1637 100% 0.0 99%
CY074034.1 Influenza A virus (A/Argentina/HNRG36/2009(H1N1)) segment 8 sequence 1637 1637 100% 0.0 99%
CY074029.1 Influenza A virus (A/Argentina/HNRG33/2009(H1N1)) segment 8 sequence 1637 1637 100% 0.0 99%
CY074024.1 Influenza A virus (A/Argentina/HNRG32/2009(H1N1)) segment 8 sequence 1637 1637 100% 0.0 99%
CY074014.1 Influenza A virus (A/Argentina/HNRG21/2009(H1N1)) segment 8 sequence 1637 1637 100% 0.0 99%
CY074004.1 Influenza A virus (A/Argentina/HNRG14/2009(H1N1)) segment 8 sequence 1637 1637 100% 0.0 99%
CY073999.1 Influenza A virus (A/Argentina/HNRG107/2009(H1N1)) segment 8 sequence 1637 1637 100% 0.0 99%
CY073978.1 Influenza A virus (A/Argentina/HNRG104/2009(H1N1)) segment 8 sequence 1637 1637 100% 0.0 99%
CY075860.1 Influenza A virus (A/swine/Argentina/CIP051-BsAs76/2009(H1N1)) segment 8 sequence 1637 1637 100% 0.0 99%
CY075664.1 Influenza A virus (A/Boston/628/2009(H1N1)) segment 8, complete sequence 1637 1637 100% 0.0 99%
CY075648.1 Influenza A virus (A/Boston/704/2009(H1N1)) segment 8, complete sequence 1637 1637 100% 0.0 99%
CY075608.1 Influenza A virus (A/Boston/681/2009(H1N1)) segment 8, complete sequence 1637 1637 100% 0.0 99%
CY075592.1 Influenza A virus (A/Boston/666/2009(H1N1)) segment 8, complete sequence 1637 1637 100% 0.0 99%
CY075584.1 Influenza A virus (A/Boston/663/2009(H1N1)) segment 8, complete sequence 1637 1637 100% 0.0 99%
CY075536.1 Influenza A virus (A/Boston/612/2009(H1N1)) segment 8, complete sequence 1637 1637 100% 0.0 99%
CY075471.1 Influenza A virus (A/Chile/4438/2009(H1N1)) segment 8, complete sequence 1637 1637 100% 0.0 99%
CY075455.1 Influenza A virus (A/Chile/4257/2009(H1N1)) segment 8, complete sequence 1637 1637 100% 0.0 99%
CY075431.1 Influenza A virus (A/Chile/4064/2009(H1N1)) segment 8, complete sequence 1637 1637 100% 0.0 99%
CY075423.1 Influenza A virus (A/Chile/3935/2009(H1N1)) segment 8, complete sequence 1637 1637 100% 0.0 99%
CY075415.1 Influenza A virus (A/Chile/3905/2009(H1N1)) segment 8, complete sequence 1637 1637 100% 0.0 99%
CY075407.1 Influenza A virus (A/Chile/3819/2009(H1N1)) segment 8, complete sequence 1637 1637 100% 0.0 99%

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