Rhiza Labs FluTracker Forum

S188T Update

A/Karaj/5327/2010
EPI295382 A/KANAGAWA/74/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72832
EPI294674 A/England/4880374/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI294417 A/VICTORIA/670/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI294405 A/BRUNEI/218/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI294391 A/SYDNEY/217/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI294388 A/SYDNEY/220/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI294297 A/PERTH/198/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI294282 A/BRISBANE/209/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI294195 A/BRISBANE/69/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI294115 A/VICTORIA/833/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI287020 A/Ghana/FS-10-4259/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI287018 A/Ghana/FS-10-4241/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI286992 A/Johannesburg/119/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI286990 A/Johannesburg/115/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI284010 A/Thailand/34-9937/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI284007 A/Thailand/34-9912/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI280311 A/India/8910/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI280289 A/Florida/14/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI279083 A/CHRISTCHURCH/15/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI279064 A/VICTORIA/512/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI278873 A/India/8910/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI278871 A/India/5107/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660
EPI255118 A/swine/Thailand/CU-RA75/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.72660

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www.twitter.com/hniman

I looked for those sequences from Iran this morning and couldn't find them.

You probably looked in the wrong place.

_________________
www.twitter.com/hniman

They are certainly there this morning:
Genbank pedigree for S188T

gb|HQ712173.1| Influenza A virus (A/Karaj/5327/2010(H1N1)) se... 38.2 0.22
dbj|AB558396.1| Influenza A virus (A/Sendai/TU617/2009(H1N1))... 38.2 0.22
gb|HQ606477.1| Influenza A virus (A/Thailand/SN_0116/2010(H1N... 38.2 0.22
gb|HQ207569.1| Influenza A virus (A/Thailand/34-9937/2010(H1N... 38.2 0.22
gb|HQ207566.1| Influenza A virus (A/Thailand/34-9912/2010(H1N... 38.2 0.22
gb|CY062316.1| Influenza A virus (A/swine/Thailand/CU-RA75/20... 38.2 0.22

_________________
www.twitter.com/hniman

New Commentary

http://www.recombinomics.com/News/12271 ... aiwan.html

_________________
www.twitter.com/hniman

Show me the right place, then please? I looked here:
http://www.ncbi.nlm.nih.gov/genomes/FLU ... ltiple.cgi

Or at least post the other two also?

T598C pedigree at Genbank

gb|HQ712175.1| Influenza A virus (A/Shahriar/5336/2010(H1N1))... 36.2 0.88
gb|HQ712172.1| Influenza A virus (A/Bandar Abbas/5096/2010(H1... 36.2 0.88
gb|HQ606482.1| Influenza A virus (A/Thailand/ST_0153/2010(H1N... 36.2 0.88
gb|HQ606481.1| Influenza A virus (A/Thailand/ST_0111/2010(H1N... 36.2 0.88
gb|HQ606480.1| Influenza A virus (A/Thailand/ST_0113/2010(H1N... 36.2 0.88
gb|HQ606479.1| Influenza A virus (A/Thailand/ST_0112_1/2010(H... 36.2 0.88
gb|HQ606478.1| Influenza A virus (A/Thailand/SN_0112_2/2010(H... 36.2 0.88
gb|CY075485.1| Influenza A virus (A/Belgorod/RII4/2009(H1N1))... 36.2 0.88
gb|HQ256654.1| Influenza A virus (A/Myanmar/M536/2009(H1N1)) ... 36.2 0.88
gb|CY069634.1| Influenza A virus (A/Singapore/478/2009(H1N1))... 36.2 0.88
gb|CY050274.1| Influenza A virus (A/Qingdao/492/2009(H1N1)) s... 36.2 0.88
gb|HM370975.1| Influenza A virus (A/turkey/Ontario/FAV114-17/... 36.2 0.88
gb|HM450134.1| Influenza A virus (A/turkey/Ontario/FAV117-1C/... 36.2 0.88
gb|HM219639.1| Influenza A virus (A/swine/NC/19646/2010(H1N1)... 36.2 0.88
gb|CY060550.1| Influenza A virus (A/Ontario/25913/2009(H1N1))... 36.2 0.88
gb|GU984408.1| Influenza A virus (A/swine/IL/5265-2/2010(H1N1... 36.2 0.88
gb|GU984405.1| Influenza A virus (A/swine/IL/5265-1/2010(H1N1... 36.2 0.88
gb|GU784874.1| Influenza A virus (A/swine/Illinois/02960/2010... 36.2 0.88
gb|GU721168.1| Influenza A virus (A/swine/Illinois/02957/2010... 36.2 0.88
gb|CY054731.1| Influenza A virus (A/California/VRDL7/2009(H1N... 36.2 0.88
gb|GU369661.1| Influenza A virus (A/Ankara/17/2009(H1N1)) seg... 36.2 0.88
gb|CY053645.1| Influenza A virus (A/swine/4/Mexico/2009(H1N1)... 36.2 0.88

_________________
www.twitter.com/hniman

The Genbank flu database trails the full Genbank database.

_________________
www.twitter.com/hniman

Obviously.

So what is the right place to be looking?

Just put the accession number in the search field and click on go

http://www.ncbi.nlm.nih.gov/nuccore

which takes you to

http://www.ncbi.nlm.nih.gov/nuccore/315227492

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www.twitter.com/hniman