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PostPosted: Wed Jun 26, 2013 11:37 am 
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Location: Pittsburgh, PA USA
In addition to H9N2 wraping H7N9, Hangzhou CDC has released sequences (at GISAID) from H5N1, A/Environment/Hangzhou/109/2013, wrapping H7N9 genes.

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PostPosted: Wed Jun 26, 2013 11:39 am 
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Posts: 56044
Location: Pittsburgh, PA USA
Isolate name:

A/Environment/Hangzhou/109/2013(H5N1)

Isolate ID:

EPI_ISL_142593
Passage details/history:


Type:

A / H5N1
Lineage:



Sample information

Collection date:

2013-04-12
Host

Feces
Additional host information:


Location:

China / Zhejiang Province
Additional location information:

Hangzhou City


Institute information

Originating lab:
Hangzhou Center for Disease Control and Prevention
Sample ID given by the sample provider:


Address:
Hangzhou Center for Disease Control and Prevention
Mingshi,
Hangzhou 310021
China


Submitting lab:
Hangzhou Center for Disease Control and Prevention
Sample ID given by the submitting laboratory:


Authors:
Li,J;
Jin,T;
Yu,XF;
Pu,XY;
Pan,JC
Address:
Hangzhou Center for Disease Control and Prevention
Jianqiao town, Mingshi Road,
Hangzhou
China


Publication
Publication


In vivo antiviral resistance

Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown

Antiviral resistance tested by sequence prediction
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown
Antiviral resistance tested by unknown method
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown

Additional information
Antigenic characterization:


Note:


Sequence

segment identifier length accession # INSDC Sequence
HA A/Environment/Hangzhou/109/2013(H5N1) 1704 EPI454493
NA A/Environment/Hangzhou/109/2013(H5N1) 1350 EPI454494

Submitter information

Submitter:

Li, Jun
Submission Date:

2013-05-29
Last modifier:

Li, Jun
Last modified:

2013-05-29
Address:
Hangzhou Center for Disease Control and Prevention
Jianqiao town, Mingshi Road,
Hangzhou
China

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PostPosted: Wed Jun 26, 2013 11:41 am 
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Posts: 56044
Location: Pittsburgh, PA USA
EPI454493 A/Environment/Hangzhou/109/2013(H5N1) (A/H5N1) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%)
EPI425688 A/duck/Vietnam/NCVD-1602/2012 (A/H5N1) segment 4 (HA) 2859.7 0.000000e+00 1655/1707 (96%)
EPI425680 A/duck/Vietnam/NCVD-1593/2012 (A/H5N1) segment 4 (HA) 2859.7 0.000000e+00 1655/1707 (96%)
EPI425648 A/duck/Vietnam/NCVD-1936/2012 (A/H5N1) segment 4 (HA) 2859.7 0.000000e+00 1655/1707 (96%)
EPI425304 A/duck/Vietnam/NCVD-1902/2012 (A/H5N1) segment 4 (HA) 2854.2 0.000000e+00 1654/1707 (96%)
EPI425272 A/duck/Vietnam/NCVD-1901/2012 (A/H5N1) segment 4 (HA) 2854.2 0.000000e+00 1654/1707 (96%)
EPI425152 A/duck/Vietnam/NCVD-1935/2012 (A/H5N1) segment 4 (HA) 2854.2 0.000000e+00 1654/1707 (96%)
EPI425128 A/duck/Vietnam/NCVD-1872/2012 (A/H5N1) segment 4 (HA) 2854.2 0.000000e+00 1654/1707 (96%)
EPI424704 A/duck/Vietnam/NCVD-1869/2012 (A/H5N1) segment 4 (HA) 2854.2 0.000000e+00 1654/1707 (96%)
EPI438142 A/muscovy duck/Vietnam/LBM315/2012 (A/H5N1) segment 4 (HA) 2848.7 0.000000e+00 1653/1707 (96%)
EPI425672 A/duck/Vietnam/NCVD-1905/2012 (A/H5N1) segment 4 (HA) 2848.7 0.000000e+00 1653/1707 (96%)
EPI425024 A/duck/Vietnam/NCVD-1884/2012 (A/H5N1) segment 4 (HA) 2848.7 0.000000e+00 1653/1707 (96%)
EPI425016 A/duck/Vietnam/NCVD-1878/2012 (A/H5N1) segment 4 (HA) 2848.7 0.000000e+00 1653/1707 (96%)
EPI424984 A/duck/Vietnam/NCVD-1584/2012 (A/H5N1) segment 4 (HA) 2848.7 0.000000e+00 1653/1707 (96%)
EPI424736 A/chicken/Vietnam/NCVD-1927/2012 (A/H5N1) segment 4 (HA) 2845.0 0.000000e+00 1652/1707 (96%)
EPI425312 A/duck/Vietnam/NCVD-1904/2012 (A/H5N1) segment 4 (HA) 2843.1 0.000000e+00 1652/1707 (96%)
EPI425184 A/duck/Vietnam/NCVD-1944/2012 (A/H5N1) segment 4 (HA) 2843.1 0.000000e+00 1652/1707 (96%)
EPI424744 A/duck/Vietnam/NCVD-1932/2012 (A/H5N1) segment 4 (HA) 2843.1 0.000000e+00 1652/1707 (96%)
EPI424196 A/muscovy duck/Vietnam/LBM230/2012 (A/H5N1) segment 4 (HA) 2843.1 0.000000e+00 1652/1707 (96%)
EPI424172 A/muscovy duck/Vietnam/LBM227/2012 (A/H5N1) segment 4 (HA) 2843.1 0.000000e+00 1652/1707 (96%)
EPI408415 A/duck/Vietnam/OIE-2202/2012 (A/H5N1) segment 4 (HA) 2843.1 0.000000e+00 1652/1707 (96%)
EPI405753 A/chicken/Vietnam/OIE-2215/2012 (A/H5N2) segment 4 (HA) 2843.1 0.000000e+00 1652/1707 (96%)
EPI424188 A/muscovy duck/Vietnam/LBM229/2012 (A/H5N1) segment 4 (HA) 2837.6 0.000000e+00 1651/1707 (96%)
EPI424180 A/muscovy duck/Vietnam/LBM228/2012 (A/H5N1) segment 4 (HA) 2837.6 0.000000e+00 1651/1707 (96%)
EPI417807 A/duck/Vietnam/OIE-2212/2012 (A/H5N1) segment 4 (HA) 2837.6 0.000000e+00 1651/1707 (96%)
EPI417796 A/duck/Vietnam/OIE-2236/2012 (A/H5N1) segment 4 (HA) 2837.6 0.000000e+00 1651/1707 (96%)
EPI417778 A/duck/Vietnam/OIE-2211/2012 (A/H5N1) segment 4 (HA) 2837.6 0.000000e+00 1651/1707 (96%)
EPI459864 A/muscovy duck/Vietnam/LBM330/2013 (A/H5N1) segment 4 (HA) 2832.0 0.000000e+00 1650/1707 (96%)
EPI459247 A/muscovy duck/Quanh Ninh/9/2013 (A/H5N1) segment 4 (HA) 2832.0 0.000000e+00 1651/1708 (96%)
EPI459239 A/muscovy duck/Quanh Ninh/6/2013 (A/H5N1) segment 4 (HA) 2832.0 0.000000e+00 1651/1708 (96%)
EPI438150 A/muscovy duck/Vietnam/LBM295/2012 (A/H5N1) segment 4 (HA) 2832.0 0.000000e+00 1650/1707 (96%)
EPI416763 A/duck/Sukoharjo/BBVW-1428-9/2012 (A/H5N1) segment 4 (HA) 2832.0 0.000000e+00 1649/1706 (96%)
EPI459257 A/duck/Quanh Ninh/21/2013 (A/H5N1) segment 4 (HA) 2826.5 0.000000e+00 1649/1707 (96%)
EPI424688 A/duck/Vietnam/NCVD-1974/2012 (A/H5N1) segment 4 (HA) 2826.5 0.000000e+00 1650/1708 (96%)
EPI416764 A/duck/Bantul/BBVW-1443-9/2012 (A/H5N1) segment 4 (HA) 2826.5 0.000000e+00 1648/1706 (96%)
EPI416765 A/duck/Sleman/BBVW-1463-10/2012 (A/H5N1) segment 4 (HA) 2821.0 0.000000e+00 1647/1706 (96%)
EPI416780 A/muscovy duck/Tegal/BBVW-1732-11/2012 (A/H5N1) segment 4 (HA) 2815.4 0.000000e+00 1646/1706 (96%)
EPI416768 A/duck/Blitar/BBVW-1731-11/2012 (A/H5N1) segment 4 (HA) 2815.4 0.000000e+00 1646/1706 (96%)
EPI416767 A/duck/Wonogiri/BBVW-1730-11/2012 (A/H5N1) segment 4 (HA) 2815.4 0.000000e+00 1646/1706 (96%)
EPI416766 A/duck/Tegal/BBVW-1727-11/2012 (A/H5N1) segment 4 (HA) 2815.4 0.000000e+00 1647/1707 (96%)
EPI335442 A/environment/Chang Sha/1/2009 (A/H5N1) segment 4 (HA) 2815.4 0.000000e+00 1647/1707 (96%)
EPI393413 A/environment/Chang Sha/4/2009 (A/H5N1) segment 4 (HA) 2796.9 0.000000e+00 1644/1707 (96%)
EPI335245 A/ruddy shelduck/Mongolia/911T/2009 (A/H5N1) segment 4 (HA) 2782.2 0.000000e+00 1641/1707 (96%)
EPI335200 A/duck/Lao/463/2010 (A/H5N1) segment 4 (HA) 2782.2 0.000000e+00 1641/1707 (96%)
EPI335193 A/duck/Lao/469/2010 (A/H5N1) segment 4 (HA) 2782.2 0.000000e+00 1641/1707 (96%)
EPI335185 A/duck/Lao/471/2010 (A/H5N1) segment 4 (HA) 2782.2 0.000000e+00 1641/1707 (96%)
EPI219350 A/rubby shelduck/Mongolia/X42/2009 (A/H5N1) segment 4 (HA) 2782.2 0.000000e+00 1641/1707 (96%)
EPI219313 A/bar-headed goose/Mongolia/X54/2009 (A/H5N1) segment 4 (HA) 2782.2 0.000000e+00 1641/1707 (96%)
EPI219308 A/bar-headed goose/Mongolia/X53/2009 (A/H5N1) segment 4 (HA) 2782.2 0.000000e+00 1641/1707 (96%)
EPI219303 A/bar-headed goose/Mongolia/X25/2009 (A/H5N1) segment 4 (HA) 2782.2 0.000000e+00 1641/1707 (96%)
EPI336758 A/chicken/Nepal/5-1cl/2010 (A/H5N1) segment 4 (HA) 2776.6 0.000000e+00 1640/1707 (96%)
EPI335441 A/environment/Chang Sha/2/2009 (A/H5N1) segment 4 (HA) 2776.6 0.000000e+00 1640/1707 (96%)
EPI219355 A/rubby shelduck/Mongolia/X63/2009 (A/H5N1) segment 4 (HA) 2776.6 0.000000e+00 1640/1707 (96%)
EPI219321 A/common goldeneye/Mongolia/X59/2009 (A/H5N1) segment 4 (HA) 2776.6 0.000000e+00 1640/1707 (96%)
EPI186947 A/bean goose/Tyva/10/2009 (A/H5N1) segment 4 (HA) 2776.6 0.000000e+00 1640/1707 (96%)
EPI336762 A/chicken/Nepal/81/2010 (A/H5N1) segment 4 (HA) 2774.8 0.000000e+00 1639/1706 (96%)
EPI336761 A/chicken/Nepal/115/2010 (A/H5N1) segment 4 (HA) 2772.9 0.000000e+00 1638/1705 (96%)
EPI335247 A/herring gull/Mongolia/833T/2009 (A/H5N1) segment 4 (HA) 2771.1 0.000000e+00 1638/1706 (96%)
EPI219326 A/common goldeneye/Mongolia/X60/2009 (A/H5N1) segment 4 (HA) 2771.1 0.000000e+00 1639/1707 (96%)
EPI300761 A/bar-headed goose/Mongolia/X53/2009 (A/H5N1) segment 4 (HA) 2767.4 0.000000e+00 1633/1699 (96%)
EPI354431 A/great cormorant/Qinghai/1/2009 (A/H5N1) segment 4 (HA) 2765.6 0.000000e+00 1638/1707 (95%)
EPI354428 A/great black-headed gull/Qinghai/4/2009 (A/H5N1) segment 4 (HA) 2765.6 0.000000e+00 1639/1708 (95%)
EPI354423 A/brown-headed gull/Qinghai/1/2009 (A/H5N1) segment 4 (HA) 2765.6 0.000000e+00 1638/1707 (95%)
EPI336768 A/duck/Nepal/DTS22/2010 (A/H5N1) segment 4 (HA) 2765.6 0.000000e+00 1636/1704 (96%)
EPI219391 A/whooper swan/Mongolia/8/2009 (A/H5N1) segment 4 (HA) 2765.6 0.000000e+00 1638/1707 (95%)
EPI219386 A/whooper swan/Mongolia/6/2009 (A/H5N1) segment 4 (HA) 2765.6 0.000000e+00 1638/1707 (95%)
EPI219381 A/whooper swan/Mongolia/2/2009 (A/H5N1) segment 4 (HA) 2765.6 0.000000e+00 1638/1707 (95%)
EPI354427 A/great black-headed gull/Qinghai/3/2009 (A/H5N1) segment 4 (HA) 2760.0 0.000000e+00 1639/1709 (95%)
EPI354425 A/great black-headed gull/1/2009 (A/H5N1) segment 4 (HA) 2760.0 0.000000e+00 1637/1707 (95%)
EPI186939 A/grebe/Tyva/3/2009 (A/H5N1) segment 4 (HA) 2760.0 0.000000e+00 1637/1707 (95%)
EPI300763 A/common goldeneye/Mongolia/X60/2009 (A/H5N1) segment 4 (HA) 2758.2 0.000000e+00 1632/1700 (96%)
EPI336767 A/duck/Nepal/DTS24/2010 (A/H5N1) segment 4 (HA) 2756.3 0.000000e+00 1636/1706 (95%)
EPI401570 A/chicken/Chiba/2/2011 (A/H5N1) segment 4 (HA) 2754.5 0.000000e+00 1636/1707 (95%)
EPI401564 A/chicken/Wakayama/1/2011 (A/H5N1) segment 4 (HA) 2754.5 0.000000e+00 1636/1707 (95%)
EPI354430 A/great black-headed gull/Qinghai/6/2009 (A/H5N1) segment 4 (HA) 2754.5 0.000000e+00 1636/1707 (95%)
EPI354426 A/great black-headed gull/Qinghai/2/2009 (A/H5N1) segment 4 (HA) 2754.5 0.000000e+00 1636/1707 (95%)
EPI341001 A/goshawk/Tochigi/64/2011 (A/H5N1) segment 4 (HA) 2754.5 0.000000e+00 1636/1707 (95%)
EPI336757 A/chicken/Nepal/2-53/2010 (A/H5N1) segment 4 (HA) 2754.5 0.000000e+00 1634/1704 (95%)
EPI335440 A/environment/Chang Sha/3/2009 (A/H5N1) segment 4 (HA) 2754.5 0.000000e+00 1636/1707 (95%)
EPI283257 A/great crested grebe/Tyva/22/2010 (A/H5N1) segment 4 (HA) 2754.5 0.000000e+00 1636/1707 (95%)
EPI336763 A/chicken/Nepal/A136/2010 (A/H5N1) segment 4 (HA) 2750.8 0.000000e+00 1634/1705 (95%)
EPI401569 A/chicken/Chiba/1/2011 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1636/1708 (95%)
EPI401568 A/chicken/Miyazaki/13/2011 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1636/1708 (95%)
EPI401567 A/chicken/Nara/1/2011 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1635/1707 (95%)
EPI395461 A/peregrine falcon/Nagasaki/4202A039/2011 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1635/1707 (95%)
EPI395410 A/peregrine falcon/Miyazaki/22M771/2011 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1635/1707 (95%)
EPI359887 A/turkey/Korea/DDC518/2011 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1636/1708 (95%)
EPI359885 A/pheasant/Korea/PT411/2011 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1636/1708 (95%)
EPI359876 A/duck/Korea/Cheonan/2010 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1636/1708 (95%)
EPI359870 A/chicken/Korea/PT412/2011 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1636/1708 (95%)
EPI359865 A/baikal teal/Korea/Q524/2010 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1635/1707 (95%)
EPI354424 A/brown-headed gull/Qinghai/2/2009 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1636/1708 (95%)
EPI341911 A/mandarin duck/Kochi/3901C005/2011 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1636/1708 (95%)
EPI336764 A/chicken/Nepal/A135/2010 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1633/1704 (95%)
EPI326390 A/duck/Hokkaido/WZ83/2010 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1635/1707 (95%)
EPI326382 A/duck/Hokkaido/WZ101/2010 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1635/1707 (95%)
EPI325623 A/Mallard duck/Korea/W404/2011 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1636/1708 (95%)
EPI314813 A/mandarin duck/Korea/K10-515/2011 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1636/1708 (95%)
EPI314812 A/mandarin duck/Korea/K10-485/2010 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1636/1708 (95%)
EPI314811 A/mandarin duck/Korea/K10-483/2010 (A/H5N1) segment 4 (HA) 2748.9 0.000000e+00 1636/1708 (95%)

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PostPosted: Wed Jun 26, 2013 11:42 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI454494 A/Environment/Hangzhou/109/2013(H5N1) (A/H5N1) segment 6 (NA) 2494.1 0.000000e+00 1350/1350 (100%)
EPI435658 A/barnswallow/Hong Kong/1161/2010 (A/H5N1) segment 6 (NA) 2366.7 0.000000e+00 1328/1351 (98%)
EPI405135 A/duck/Vietnam/NCVD-672/2011 (A/H5N1) segment 6 (NA) 2355.6 0.000000e+00 1326/1351 (98%)
EPI337010 A/duck/Zhejiang/213/2011 (A/H5N1) segment 6 (NA) 2355.6 0.000000e+00 1326/1351 (98%)
EPI337013 A/duck/Zhejiang/2243/2011 (A/H5N1) segment 6 (NA) 2344.5 0.000000e+00 1324/1351 (98%)
EPI337014 A/duck/Zhejiang/2244/2011 (A/H5N1) segment 6 (NA) 2339.0 0.000000e+00 1323/1351 (97%)
EPI337012 A/duck/Zhejiang/2242/2011 (A/H5N1) segment 6 (NA) 2339.0 0.000000e+00 1323/1351 (97%)
EPI337011 A/duck/Zhejiang/224/2011 (A/H5N1) segment 6 (NA) 2339.0 0.000000e+00 1323/1351 (97%)
EPI337016 A/duck/Zhejiang/2248/2011 (A/H5N1) segment 6 (NA) 2333.4 0.000000e+00 1322/1351 (97%)
EPI347305 A/Guangdong-Shenzhen/1/2011(H5N1) (A/H5N1) segment 6 (NA) 2327.9 0.000000e+00 1321/1351 (97%)
EPI387937 A/muscovy duck/Vietnam/LBM66/2011 (A/H5N1) segment 6 (NA) 2316.8 0.000000e+00 1318/1350 (97%)
EPI424983 A/duck/Vietnam/NCVD-1584/2012 (A/H5N1) segment 6 (NA) 2311.3 0.000000e+00 1318/1351 (97%)
EPI417809 A/duck/Vietnam/OIE-2212/2012 (A/H5N1) segment 6 (NA) 2311.3 0.000000e+00 1318/1351 (97%)
EPI417798 A/duck/Vietnam/OIE-2236/2012 (A/H5N1) segment 6 (NA) 2311.3 0.000000e+00 1318/1351 (97%)
EPI417780 A/duck/Vietnam/OIE-2211/2012 (A/H5N1) segment 6 (NA) 2311.3 0.000000e+00 1318/1351 (97%)
EPI408417 A/duck/Vietnam/OIE-2202/2012 (A/H5N1) segment 6 (NA) 2311.3 0.000000e+00 1318/1351 (97%)
EPI371699 A/black headed gull/Hong Kong/07035-1/2011 (A/H5N1) segment 6 (NA) 2305.7 0.000000e+00 1317/1351 (97%)
EPI424198 A/muscovy duck/Vietnam/LBM230/2012 (A/H5N1) segment 6 (NA) 2300.2 0.000000e+00 1316/1351 (97%)
EPI424190 A/muscovy duck/Vietnam/LBM229/2012 (A/H5N1) segment 6 (NA) 2300.2 0.000000e+00 1316/1351 (97%)
EPI424182 A/muscovy duck/Vietnam/LBM228/2012 (A/H5N1) segment 6 (NA) 2300.2 0.000000e+00 1316/1351 (97%)
EPI424174 A/muscovy duck/Vietnam/LBM227/2012 (A/H5N1) segment 6 (NA) 2300.2 0.000000e+00 1316/1351 (97%)
EPI219332 A/crested myna/Hong Kong/1178/2009 (A/H5N1) segment 6 (NA) 2300.2 0.000000e+00 1316/1351 (97%)
EPI438144 A/muscovy duck/Vietnam/LBM315/2012 (A/H5N1) segment 6 (NA) 2294.7 0.000000e+00 1315/1351 (97%)
EPI350157 A/chicken/Vietnam/NCVD-390/2009 (A/H5N1) segment 6 (NA) 2294.7 0.000000e+00 1315/1351 (97%)
EPI219336 A/large billed crow/Hong Kong/885/2009 (A/H5N1) segment 6 (NA) 2294.7 0.000000e+00 1315/1351 (97%)
EPI220564 A/house crow/Hong Kong/7677/2008 (A/H5N1) segment 6 (NA) 2285.4 0.000000e+00 1313/1351 (97%)
EPI438152 A/muscovy duck/Vietnam/LBM295/2012 (A/H5N1) segment 6 (NA) 2283.6 0.000000e+00 1313/1351 (97%)
EPI350491 A/chicken/Vietnam/NCVD-421/2010 (A/H5N1) segment 6 (NA) 2283.6 0.000000e+00 1314/1352 (97%)
EPI350406 A/chicken/Vietnam/NCVD-407/2010 (A/H5N1) segment 6 (NA) 2283.6 0.000000e+00 1313/1351 (97%)
EPI350399 A/chicken/Vietnam/NCVD-406/2010 (A/H5N1) segment 6 (NA) 2283.6 0.000000e+00 1313/1351 (97%)
EPI348894 A/duck/Vietnam/NCVD-461/2010 (A/H5N1) segment 6 (NA) 2283.6 0.000000e+00 1314/1352 (97%)
EPI348887 A/duck/Vietnam/NCVD-460/2010 (A/H5N1) segment 6 (NA) 2283.6 0.000000e+00 1314/1352 (97%)
EPI348880 A/chicken/Vietnam/NCVD-459/2010 (A/H5N1) segment 6 (NA) 2283.6 0.000000e+00 1314/1352 (97%)
EPI348859 A/duck/Vietnam/NCVD-449/2010 (A/H5N1) segment 6 (NA) 2283.6 0.000000e+00 1314/1352 (97%)
EPI254281 A/oriental magpie robin/Hong Kong/9298/2009 (A/H5N1) segment 6 (NA) 2283.6 0.000000e+00 1314/1352 (97%)
EPI254279 A/feral pigeon/Hong Kong/3409/2009 (A/H5N1) segment 6 (NA) 2283.6 0.000000e+00 1313/1351 (97%)
EPI459249 A/muscovy duck/Quanh Ninh/9/2013 (A/H5N1) segment 6 (NA) 2278.0 0.000000e+00 1312/1351 (97%)
EPI459241 A/muscovy duck/Quanh Ninh/6/2013 (A/H5N1) segment 6 (NA) 2278.0 0.000000e+00 1312/1351 (97%)
EPI348866 A/duck/Vietnam/NCVD-456/2010 (A/H5N1) segment 6 (NA) 2278.0 0.000000e+00 1313/1352 (97%)
EPI337233 A/Hubei/1/2010 (A/H5N1) segment 6 (NA) 2278.0 0.000000e+00 1312/1351 (97%)
EPI267031 A/Hubei/1/2010 (A/H5N1) segment 6 (NA) 2274.3 0.000000e+00 1311/1351 (97%)
EPI348873 A/duck/Vietnam/NCVD-457/2010 (A/H5N1) segment 6 (NA) 2272.5 0.000000e+00 1312/1352 (97%)
EPI348789 A/duck/Vietnam/NCVD-458/2010 (A/H5N1) segment 6 (NA) 2272.5 0.000000e+00 1312/1352 (97%)
EPI350150 A/chicken/Vietnam/NCVD-389/2009 (A/H5N1) segment 6 (NA) 2270.7 0.000000e+00 1310/1350 (97%)
EPI459866 A/muscovy duck/Vietnam/LBM330/2013 (A/H5N1) segment 6 (NA) 2267.0 0.000000e+00 1310/1351 (96%)
EPI459259 A/duck/Quanh Ninh/21/2013 (A/H5N1) segment 6 (NA) 2261.4 0.000000e+00 1309/1351 (96%)
EPI389924 A/duck/Vietnam/LBM133/2012 (A/H5N1) segment 6 (NA) 2261.4 0.000000e+00 1310/1352 (96%)
EPI351368 A/duck/Vietnam/NCVD-423/2010 (A/H5N1) segment 6 (NA) 2261.4 0.000000e+00 1311/1353 (96%)
EPI389955 A/muscovy duck/Vietnam/LBM113/2012 (A/H5N1) segment 6 (NA) 2255.9 0.000000e+00 1309/1352 (96%)
EPI389940 A/duck/Vietnam/LBM139/2012 (A/H5N1) segment 6 (NA) 2255.9 0.000000e+00 1309/1352 (96%)
EPI389932 A/duck/Vietnam/LBM136/2012 (A/H5N1) segment 6 (NA) 2255.9 0.000000e+00 1309/1352 (96%)
EPI389916 A/duck/Vietnam/LBM132/2012 (A/H5N1) segment 6 (NA) 2255.9 0.000000e+00 1309/1352 (96%)
EPI382210 A/duck/Vietnam/OIE-1287/2012 (A/H5N1) segment 6 (NA) 2255.9 0.000000e+00 1309/1352 (96%)
EPI348922 A/duck/Vietnam/NCVD-431/2010 (A/H5N1) segment 6 (NA) 2255.9 0.000000e+00 1310/1353 (96%)
EPI387930 A/muscovy duck/Vietnam/LBM57/2011 (A/H5N1) segment 6 (NA) 2250.3 0.000000e+00 1307/1351 (96%)
EPI432710 A/muscovy duck/Vietnam/LBM260/2012 (A/H5N1) segment 6 (NA) 2244.8 0.000000e+00 1307/1352 (96%)
EPI387923 A/muscovy duck/Vietnam/LBM14/2011 (A/H5N1) segment 6 (NA) 2244.8 0.000000e+00 1306/1351 (96%)
EPI350444 A/chicken/Vietnam/NCVD-399/2010 (A/H5N1) segment 6 (NA) 2244.8 0.000000e+00 1306/1351 (96%)
EPI348845 A/duck/Vietnam/NCVD-432/2010 (A/H5N1) segment 6 (NA) 2244.8 0.000000e+00 1308/1353 (96%)
EPI219334 A/grey heron/Hong Kong/779/2009 (A/H5N1) segment 6 (NA) 2244.8 0.000000e+00 1306/1351 (96%)
EPI168042 A/grey heron/Hong Kong/1046/2008 (A/H5N1) segment 6 (NA) 2244.8 0.000000e+00 1306/1351 (96%)
EPI337219 A/Guangxi/1/2009 (A/H5N1) segment 6 (NA) 2241.1 0.000000e+00 1305/1351 (96%)
EPI280087 A/Guangxi/1/2009 (A/H5N1) segment 6 (NA) 2241.1 0.000000e+00 1305/1351 (96%)
EPI432702 A/muscovy duck/Vietnam/LBM258/2012 (A/H5N1) segment 6 (NA) 2239.3 0.000000e+00 1306/1352 (96%)
EPI168050 A/magpie robin/Hong Kong/1097/2008 (A/H5N1) segment 6 (NA) 2239.3 0.000000e+00 1305/1351 (96%)
EPI389948 A/duck/Vietnam/LBM140/2012 (A/H5N1) segment 6 (NA) 2230.0 0.000000e+00 1304/1352 (96%)
EPI168058 A/magpie robin/Hong Kong/1897/2008 (A/H5N1) segment 6 (NA) 2228.2 0.000000e+00 1303/1351 (96%)
EPI168034 A/great egret/Hong Kong/807/2008 (A/H5N1) segment 6 (NA) 2228.2 0.000000e+00 1303/1351 (96%)
EPI167994 A/little egret/Hong Kong/8550/2007 (A/H5N1) segment 6 (NA) 2217.1 0.000000e+00 1301/1351 (96%)
EPI399725 A/environment/Hunan/3/2011 (A/H5N1) segment 6 (NA) 2215.3 0.000000e+00 1302/1352 (96%)
EPI168010 A/grey heron/Hong Kong/3088/2007 (A/H5N1) segment 6 (NA) 2206.0 0.000000e+00 1299/1351 (96%)
EPI383234 A/chicken/Sagaing/295/2010 (A/H5N1) segment 6 (NA) 2202.3 0.000000e+00 1270/1308 (97%)
EPI398900 A/duck/Vietnam/QT801/2011 (A/H5N1) segment 6 (NA) 2193.1 0.000000e+00 1297/1351 (96%)
EPI168002 A/little egret/Hong Kong/8863/2007 (A/H5N1) segment 6 (NA) 2172.8 0.000000e+00 1293/1351 (95%)
EPI111961 A/chicken/Hong Kong/282/2006 (A/H5N1) segment 6 (NA) 2161.7 0.000000e+00 1291/1351 (95%)
EPI337130 A/Guangdong/2/2006 (A/H5N1) segment 6 (NA) 2156.2 0.000000e+00 1290/1351 (95%)
EPI280024 A/Guangdong/2/2006 (A/H5N1) segment 6 (NA) 2156.2 0.000000e+00 1290/1351 (95%)
EPI126687 A/human/China/GD02/2006 (A/H5N1) segment 6 (NA) 2156.2 0.000000e+00 1290/1351 (95%)
EPI224967 A/chicken/Hong Kong/D-06-0947/2006 (A/H5N1) segment 6 (NA) 2150.6 0.000000e+00 1289/1351 (95%)
EPI221582 A/Daurian starling/Hong Kong/1532/2007 (A/H5N1) segment 6 (NA) 2145.1 0.000000e+00 1288/1351 (95%)
EPI167971 A/common magpie/Hong Kong/5052/2007 (A/H5N1) segment 6 (NA) 2145.1 0.000000e+00 1288/1351 (95%)
EPI111971 A/chicken/Hong Kong/947/2006 (A/H5N1) segment 6 (NA) 2145.1 0.000000e+00 1286/1348 (95%)
EPI111959 A/magpie robin/Hong Kong/75/2006 (A/H5N1) segment 6 (NA) 2145.1 0.000000e+00 1286/1348 (95%)
EPI398903 A/duck/Vietnam/QT802/2011 (A/H5N1) segment 6 (NA) 2143.2 0.000000e+00 1288/1351 (95%)
EPI167986 A/house crow/Hong Kong/5288/2007 (A/H5N1) segment 6 (NA) 2139.5 0.000000e+00 1287/1351 (95%)
EPI167892 A/peregrine falcon/Hong Kong/1143/2007 (A/H5N1) segment 6 (NA) 2139.5 0.000000e+00 1281/1342 (95%)
EPI222036 A/environment/Hunan/5-32/2007 (A/H5N1) segment 6 (NA) 2134.0 0.000000e+00 1286/1351 (95%)
EPI220273 A/black-crowned night heron/Hong Kong/659/2008 (A/H5N1) segment 6 (NA) 2134.0 0.000000e+00 1286/1351 (95%)
EPI112195 A/goose/Guiyang/1461/2006 (A/H5N1) segment 6 (NA) 2134.0 0.000000e+00 1286/1351 (95%)
EPI112005 A/duck/Guangxi/4830/2005 (A/H5N1) segment 6 (NA) 2134.0 0.000000e+00 1287/1352 (95%)
EPI327219 A/chicken/Viet Nam/TMU009/2008 (A/H5N1) segment 6 (NA) 2132.2 0.000000e+00 1284/1349 (95%)
EPI426144 A/Viet Nam/HN30850/2005 (A/H5N1) segment 6 (NA) 2128.5 0.000000e+00 1286/1352 (95%)
EPI227012 A/chicken/Ninh Binh/209/2005 (A/H5N1) segment 6 (NA) 2128.5 0.000000e+00 1286/1352 (95%)
EPI221899 A/duck/Hunan/3/2007 (A/H5N1) segment 6 (NA) 2128.5 0.000000e+00 1285/1351 (95%)
EPI180957 A/duck/Laos/22/2006 (A/H5N1) segment 6 (NA) 2128.5 0.000000e+00 1286/1352 (95%)
EPI170716 A/chicken/Vietnam/202/2005 (A/H5N1) segment 6 (NA) 2128.5 0.000000e+00 1286/1352 (95%)
EPI170676 A/duck/Vietnam/207/2005 (A/H5N1) segment 6 (NA) 2128.5 0.000000e+00 1286/1352 (95%)
EPI170660 A/chicken/Vietnam/209/2005 (A/H5N1) segment 6 (NA) 2128.5 0.000000e+00 1286/1352 (95%)
EPI170652 A/duck/Vietnam/210/2005 (A/H5N1) segment 6 (NA) 2128.5 0.000000e+00 1286/1352 (95%)
EPI170645 A/Muscovy duck/Vietnam/211/2005 (A/H5N1) segment 6 (NA) 2128.5 0.000000e+00 1286/1352 (95%)

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PostPosted: Wed Jun 26, 2013 11:43 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
Isolate name:

A/Environment/Hangzhou/109/2013

Isolate ID:

EPI_ISL_139908
Passage details/history:


Type:

A / H7N9
Lineage:



Sample information

Collection date:

2013-04-12
Host

Feces
Additional host information:


Location:

China / Zhejiang Province
Additional location information:

Hangzhou City


Institute information

Originating lab:
Hangzhou Center for Disease Control and Prevention
Sample ID given by the sample provider:


Address:
Hangzhou Center for Disease Control and Prevention
Mingshi,
Hangzhou 310021
China


Submitting lab:
Hangzhou Center for Disease Control and Prevention
Sample ID given by the submitting laboratory:


Authors:
Li,J;
Yu,XF;
Pu,XY;
Xie,L;
Sun,YX;
Xiao,HX;
Wang,FJ;
Din,H;
Wu,Y;
Liu,D;
Zhao,GQ;
Liu,J;
Pan,JC
Address:
Hangzhou Center for Disease Control and Prevention
Jianqiao town, Mingshi Road,
Hangzhou
China


Publication
Publication


In vivo antiviral resistance

Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown

Antiviral resistance tested by sequence prediction
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown
Antiviral resistance tested by unknown method
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown

Additional information
Antigenic characterization:


Note:


Sequence

segment identifier length accession # INSDC Sequence
PB2 A/Environment/Hangzhou/109/2013 2280 EPI443672
PB1 A/Environment/Hangzhou/109/2013 2274 EPI443673
PA A/Environment/Hangzhou/109/2013 2151 EPI443674
HA A/Environment/Hangzhou/109/2013 1683 EPI443675
NP A/Environment/Hangzhou/109/2013 1497 EPI443676
NA A/Environment/Hangzhou/109/2013 1398 EPI443677
MP A/Environment/Hangzhou/109/2013 982 EPI443678
NS A/Environment/Hangzhou/109/2013 838 EPI443679

Submitter information

Submitter:

Li, Jun
Submission Date:

2013-05-04
Last modifier:

Li, Jun
Last modified:

2013-05-04
Address:
Hangzhou Center for Disease Control and Prevention
Jianqiao town, Mingshi Road,
Hangzhou
China

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PostPosted: Wed Jun 26, 2013 12:09 pm 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI446746 A/Fujian/1/2013 (A/H7N9) segment 4 (HA) 3109.0 0.000000e+00 1683/1683 (100%)
EPI443675 A/Environment/Hangzhou/109/2013 (A/H7N9) segment 4 (HA) 3109.0 0.000000e+00 1683/1683 (100%)
EPI443042 A/Zhejiang/2/2013 (A/H7N9) segment 4 (HA) 3109.0 0.000000e+00 1683/1683 (100%)
EPI442707 A/chicken/Jiangsu/K89/2013 (A/H7N9) segment 4 (HA) 3109.0 0.000000e+00 1683/1683 (100%)
EPI441794 A/Zhejiang/DTID-ZJU01/2013 (A/H7N9) segment 4 (HA) 3109.0 0.000000e+00 1683/1683 (100%)
EPI439507 A/Anhui/1/2013 (A/H7N9) segment 4 (HA) 3109.0 0.000000e+00 1683/1683 (100%)
EPI460535 A/Nanchang/1/2013 (A/H7N9) segment 4 (HA) 3103.5 0.000000e+00 1682/1683 (99%)
EPI443659 A/Chicken/Hangzhou/48/2013 (A/H7N9) segment 4 (HA) 3103.5 0.000000e+00 1682/1683 (99%)
EPI443025 A/Shanghai/4/2013 (A/H7N9) segment 4 (HA) 3103.5 0.000000e+00 1682/1683 (99%)
EPI443022 A/Shanghai/3/2013 (A/H7N9) segment 4 (HA) 3103.5 0.000000e+00 1682/1683 (99%)
EPI442716 A/Environment/Hangzhou/34/2013 (A/H7N9) segment 4 (HA) 3103.5 0.000000e+00 1682/1683 (99%)
EPI440693 A/Environment/Shanghai/S1088/2013 (A/H7N9) segment 4 (HA) 3103.5 0.000000e+00 1682/1683 (99%)
EPI439502 A/Shanghai/2/2013 (A/H7N9) segment 4 (HA) 3103.5 0.000000e+00 1682/1683 (99%)
EPI443651 A/Environment/Hangzhou/37/2013 (A/H7N9) segment 4 (HA) 3098.0 0.000000e+00 1681/1683 (99%)
EPI443034 A/Zhejiang/1/2013 (A/H7N9) segment 4 (HA) 3098.0 0.000000e+00 1681/1683 (99%)
EPI443028 A/Zhejiang/01/2013 (A/H7N9) segment 4 (HA) 3098.0 0.000000e+00 1681/1683 (99%)
EPI442706 A/chicken/Jiangsu/K27/2013 (A/H7N9) segment 4 (HA) 3098.0 0.000000e+00 1681/1683 (99%)
EPI440701 A/Pigeon/Shanghai/S1069/2013 (A/H7N9) segment 4 (HA) 3098.0 0.000000e+00 1681/1683 (99%)
EPI440095 A/Hangzhou/1/2013 (A/H7N9) segment 4 (HA) 3098.0 0.000000e+00 1681/1683 (99%)
EPI453609 A/environment/Nanjing/2913/2013 (A/H7N9) segment 4 (HA) 3092.4 0.000000e+00 1680/1683 (99%)
EPI453604 A/Nanjing/1/2013 (A/H7N9) segment 4 (HA) 3092.4 0.000000e+00 1680/1683 (99%)
EPI442710 A/Hangzhou/2/2013 (A/H7N9) segment 4 (HA) 3092.4 0.000000e+00 1680/1683 (99%)
EPI440685 A/Chicken/Shanghai/S1053/2013 (A/H7N9) segment 4 (HA) 3092.4 0.000000e+00 1680/1683 (99%)
EPI453480 A/Zhejiang/HZ1/2013 (A/H7N9) segment 4 (HA) 3086.9 0.000000e+00 1679/1683 (99%)
EPI446962 A/Shanghai/4664T/2013 (A/H7N9) segment 4 (HA) 3086.9 0.000000e+00 1679/1683 (99%)
EPI442713 A/Hangzhou/3/2013 (A/H7N9) segment 4 (HA) 3086.9 0.000000e+00 1679/1683 (99%)
EPI445912 A/Taiwan/1/2013 (A/H7N9) segment 4 (HA) 3081.3 0.000000e+00 1678/1683 (99%)
EPI443667 A/Chicken/Hangzhou/50/2013 (A/H7N9) segment 4 (HA) 3081.3 0.000000e+00 1678/1683 (99%)
EPI442721 A/chicken/Zhejiang/DTID-ZJU01/2013 (A/H7N9) segment 4 (HA) 3048.1 0.000000e+00 1672/1683 (99%)
EPI452268 A/Taiwan/T02081/2013 (A/H7N9) segment 4 (HA) 3044.4 0.000000e+00 1654/1657 (99%)
EPI439486 A/Shanghai/1/2013 (A/H7N9) segment 4 (HA) 3042.6 0.000000e+00 1671/1683 (99%)
EPI451278 A/Shanghai/Patient3/2013 (A/H7N9) segment 4 (HA) 3037.0 0.000000e+00 1669/1681 (99%)
EPI452260 A/Taiwan/S02076/2013 (A/H7N9) segment 4 (HA) 3033.3 0.000000e+00 1648/1651 (99%)
EPI451254 A/Shanghai/Patient2/2013 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1660/1682 (98%)
EPI451013 A/Shanghai/patient1/2013 (A/H7N9) segment 4 (HA) 2981.6 0.000000e+00 1661/1683 (98%)
EPI451266 A/Shanghai/Patient4/2013 (A/H7N9) segment 4 (HA) 2976.1 0.000000e+00 1643/1658 (99%)
EPI371223 A/duck/Zhejiang/12/2011 (A/H7N3) segment 4 (HA) 2732.3 0.000000e+00 1617/1685 (95%)
EPI371222 A/duck/Zhejiang/11/2011 (A/H7N3) segment 4 (HA) 2732.3 0.000000e+00 1617/1685 (95%)
EPI371220 A/duck/Zhejiang/2/2011 (A/H7N3) segment 4 (HA) 2710.2 0.000000e+00 1613/1685 (95%)
EPI371221 A/duck/Zhejiang/10/2011 (A/H7N3) segment 4 (HA) 2693.5 0.000000e+00 1610/1685 (95%)
EPI451233 A/duck/Zhejiang/DK16/2013 (A/H7N3) segment 4 (HA) 2671.4 0.000000e+00 1607/1686 (95%)
EPI451232 A/duck/Zhejiang/DK10/2013 (A/H7N3) segment 4 (HA) 2671.4 0.000000e+00 1607/1686 (95%)
EPI244489 A/wild bird feces/Korea/HDR22/2006 (A/H7N7) segment 4 (HA) 2654.8 0.000000e+00 1601/1682 (95%)
EPI290727 A/duck/Shiga/B149/2007 (A/H7N7) segment 4 (HA) 2643.7 0.000000e+00 1601/1685 (95%)
EPI290600 A/duck/Shimane/137/2006 (A/H7N3) segment 4 (HA) 2632.6 0.000000e+00 1599/1685 (94%)
EPI169703 A/duck/Mongolia/867/2002 (A/H7N1) segment 4 (HA) 2632.6 0.000000e+00 1599/1685 (94%)
EPI244539 A/wild bird feces/Shihwa/21/2006 (A/H7N3) segment 4 (HA) 2625.2 0.000000e+00 1590/1674 (94%)
EPI290730 A/duck/Tsukuba/700/2007 (A/H7N7) segment 4 (HA) 2621.5 0.000000e+00 1597/1685 (94%)
EPI290729 A/duck/Tsukuba/664/2007 (A/H7N7) segment 4 (HA) 2621.5 0.000000e+00 1597/1685 (94%)
EPI290599 A/duck/Shimane/83/2006 (A/H7N3) segment 4 (HA) 2621.5 0.000000e+00 1597/1685 (94%)
EPI244511 A/duck/Korea/BC10/2007 (A/H7N3) segment 4 (HA) 2616.0 0.000000e+00 1596/1685 (94%)
EPI1360 A/duck/Hokkaido/Vac-2/04 (A/H7N7) segment 4 (HA) 2616.0 0.000000e+00 1597/1686 (94%)
EPI125243 A/duck/Jiangxi/1742/03 (A/H7N7) segment 4 (HA) 2612.3 0.000000e+00 1580/1662 (95%)
EPI447361 A/duck/Fukui/1/2004 (A/H7N7) segment 4 (HA) 2610.4 0.000000e+00 1595/1685 (94%)
EPI290601 A/duck/Shimane/18/2006 (A/H7N7) segment 4 (HA) 2604.9 0.000000e+00 1595/1686 (94%)
EPI125231 A/duck/Jiangxi/1786/03 (A/H7N7) segment 4 (HA) 2604.9 0.000000e+00 1572/1652 (95%)
EPI161641 A/duck/Hokkaido/143/03 (A/H7N1) segment 4 (HA) 2603.0 0.000000e+00 1593/1684 (94%)
EPI290731 A/duck/Tsukuba/922/2008 (A/H7N7) segment 4 (HA) 2599.4 0.000000e+00 1593/1685 (94%)
EPI244501 A/mallard/Korea/GG2/2007 (A/H7N7) segment 4 (HA) 2599.4 0.000000e+00 1593/1685 (94%)
EPI220646 A/northern pintail/Akita/1369/2008 (A/H7N7) segment 4 (HA) 2599.4 0.000000e+00 1593/1685 (94%)
EPI220642 A/northern pintail/Akita/1367/2008 (A/H7N7) segment 4 (HA) 2599.4 0.000000e+00 1593/1685 (94%)
EPI125233 A/duck/Jiangxi/1814/03 (A/H7N7) segment 4 (HA) 2599.4 0.000000e+00 1569/1649 (95%)
EPI125229 A/duck/Jiangxi/1760/03 (A/H7N7) segment 4 (HA) 2599.4 0.000000e+00 1572/1653 (95%)
EPI290728 A/duck/Tsukuba/30/2007 (A/H7N7) segment 4 (HA) 2593.8 0.000000e+00 1592/1685 (94%)
EPI220644 A/northern pintail/Akita/1368/2008 (A/H7N7) segment 4 (HA) 2593.8 0.000000e+00 1592/1685 (94%)
EPI160654 A/duck/Taiwan/4201/99 (A/H7N7) segment 4 (HA) 2592.0 0.000000e+00 1592/1685 (94%)
EPI387370 A/environment/Mongolia/1-51/2007 (A/H7N7) segment 4 (HA) 2588.3 0.000000e+00 1581/1670 (94%)
EPI220650 A/northern pintail/Aomori/1001/2008 (A/H7N7) segment 4 (HA) 2588.3 0.000000e+00 1593/1687 (94%)
EPI220648 A/northern pintail/Akita/1370/2008 (A/H7N7) segment 4 (HA) 2588.3 0.000000e+00 1592/1686 (94%)
EPI222343 A/northern pintail/Aomori/372/2008 (A/H7N7) segment 4 (HA) 2582.7 0.000000e+00 1591/1686 (94%)
EPI220657 A/northern pintail/Miyagi/674/2008 (A/H7N7) segment 4 (HA) 2582.7 0.000000e+00 1591/1686 (94%)
EPI244500 A/mallard/Korea/GG3/2007 (A/H7N7) segment 4 (HA) 2579.0 0.000000e+00 1582/1674 (94%)
EPI244490 A/wild bird feces/Korea/HDR16/2003 (A/H7N2) segment 4 (HA) 2577.2 0.000000e+00 1589/1685 (94%)
EPI244592 A/wild bird feces/Korea/ESD07/2005 (A/H7N7) segment 4 (HA) 2575.3 0.000000e+00 1580/1672 (94%)
EPI173713 A/duck/Mongolia/119/2008 (A/H7N9) segment 4 (HA) 2571.7 0.000000e+00 1588/1685 (94%)
EPI244492 A/mallard/Korea/GH170/2007 (A/H7N7) segment 4 (HA) 2568.0 0.000000e+00 1581/1675 (94%)
EPI244537 A/wild bird feces/Hadoree/8/2003 (A/H7N2) segment 4 (HA) 2566.1 0.000000e+00 1586/1685 (94%)
EPI393348 A/wild bird/Korea/5-77/2005 (A/H7N8) segment 4 (HA) 2564.3 0.000000e+00 1553/1634 (95%)
EPI244533 A/wild bird feces/Nakdonggang/2-14/2004 (A/H7N2) segment 4 (HA) 2558.7 0.000000e+00 1581/1678 (94%)
EPI244502 A/magpie/Korea/YJD174/2007 (A/H7N7) segment 4 (HA) 2556.9 0.000000e+00 1573/1666 (94%)
EPI392632 A/wild bird/Korea/A330/09 (A/H7N7) segment 4 (HA) 2549.5 0.000000e+00 1585/1686 (94%)
EPI392628 A/wild bird/Korea/A331/09 (A/H7N7) segment 4 (HA) 2549.5 0.000000e+00 1585/1686 (94%)
EPI244491 A/mallard/Korea/GH171/2007 (A/H7N7) segment 4 (HA) 2549.5 0.000000e+00 1569/1662 (94%)
EPI244529 A/Northern shoveler/Seongdong/175/2008 (A/H7N3) segment 4 (HA) 2545.8 0.000000e+00 1579/1677 (94%)
EPI244535 A/mallard/Geumgang/1/2007 (A/H7N7) segment 4 (HA) 2540.3 0.000000e+00 1574/1671 (94%)
EPI244510 A/duck/Korea/GJ56/2007 (A/H7N8) segment 4 (HA) 2540.3 0.000000e+00 1575/1674 (94%)
EPI393356 A/mallard/Korea/5-80/2005 (A/H7N8) segment 4 (HA) 2536.6 0.000000e+00 1549/1635 (94%)
EPI315698 A/duck/Hokkaido/1/2010 (A/H7N7) segment 4 (HA) 2532.9 0.000000e+00 1582/1686 (93%)
EPI290732 A/duck/Chiba/20/2009 (A/H7N7) segment 4 (HA) 2532.9 0.000000e+00 1582/1686 (93%)
EPI418424 A/quail/Thailand/CU-J2882/2009 (A/H7N1) segment 4 (HA) 2527.3 0.000000e+00 1573/1674 (93%)
EPI238137 A/mallard/Netherlands/12/2000 (A/H7N3) segment 4 (HA) 2527.3 0.000000e+00 1582/1687 (93%)
EPI63315 A/chicken/Italy/1082/1999 (A/H7N1) segment 4 (HA) 2527.3 0.000000e+00 1582/1687 (93%)
EPI42349 A/mallard/Netherlands/12/00 (A/H7N3) segment 4 (HA) 2527.3 0.000000e+00 1582/1687 (93%)
EPI18994 A/mallard/Netherlands/12/00 (A/H7N3) segment 4 (HA) 2527.3 0.000000e+00 1582/1687 (93%)
EPI13006 A/turkey/Italy/3775/99 (A/H7N1) segment 4 (HA) 2527.3 0.000000e+00 1582/1687 (93%)
EPI12996 A/turkey/Italy/4073/99 (A/H7N1) segment 4 (HA) 2527.3 0.000000e+00 1582/1687 (93%)
EPI392629 A/pintail/Korea/1173/09 (A/H7N7) segment 4 (HA) 2523.6 0.000000e+00 1573/1675 (93%)
EPI238664 A/turkey/Italy/977/1999 (A/H7N1) segment 4 (HA) 2521.8 0.000000e+00 1581/1687 (93%)
EPI69215 A/turkey/Italy/1265/99 (A/H7N1) segment 4 (HA) 2521.8 0.000000e+00 1581/1687 (93%)
EPI68180 A/turkey/Italy/977/99 (A/H7N1) segment 4 (HA) 2521.8 0.000000e+00 1581/1687 (93%)

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PostPosted: Wed Jun 26, 2013 12:10 pm 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI443677 A/Environment/Hangzhou/109/2013 (A/H7N9) segment 6 (NA) 2582.7 0.000000e+00 1398/1398 (100%)
EPI451234 A/chicken/Zhejiang/C11/2013 (A/H9N9) segment 6 (NA) 2571.7 0.000000e+00 1396/1398 (99%)
EPI443653 A/Environment/Hangzhou/37/2013 (A/H7N9) segment 6 (NA) 2571.7 0.000000e+00 1396/1398 (99%)
EPI443044 A/Zhejiang/2/2013 (A/H7N9) segment 6 (NA) 2571.7 0.000000e+00 1396/1398 (99%)
EPI443026 A/Shanghai/4/2013 (A/H7N9) segment 6 (NA) 2571.7 0.000000e+00 1396/1398 (99%)
EPI443023 A/Shanghai/3/2013 (A/H7N9) segment 6 (NA) 2571.7 0.000000e+00 1396/1398 (99%)
EPI442717 A/Environment/Hangzhou/34/2013 (A/H7N9) segment 6 (NA) 2571.7 0.000000e+00 1396/1398 (99%)
EPI442711 A/Hangzhou/2/2013 (A/H7N9) segment 6 (NA) 2571.7 0.000000e+00 1396/1398 (99%)
EPI453611 A/environment/Nanjing/2913/2013 (A/H7N9) segment 6 (NA) 2566.1 0.000000e+00 1395/1398 (99%)
EPI446747 A/Fujian/1/2013 (A/H7N9) segment 6 (NA) 2566.1 0.000000e+00 1395/1398 (99%)
EPI445914 A/Taiwan/1/2013 (A/H7N9) segment 6 (NA) 2566.1 0.000000e+00 1395/1398 (99%)
EPI443029 A/Zhejiang/01/2013 (A/H7N9) segment 6 (NA) 2566.1 0.000000e+00 1395/1398 (99%)
EPI440700 A/Pigeon/Shanghai/S1069/2013 (A/H7N9) segment 6 (NA) 2566.1 0.000000e+00 1395/1398 (99%)
EPI440096 A/Hangzhou/1/2013 (A/H7N9) segment 6 (NA) 2566.1 0.000000e+00 1395/1398 (99%)
EPI439509 A/Anhui/1/2013 (A/H7N9) segment 6 (NA) 2566.1 0.000000e+00 1395/1398 (99%)
EPI439500 A/Shanghai/2/2013 (A/H7N9) segment 6 (NA) 2566.1 0.000000e+00 1395/1398 (99%)
EPI443036 A/Zhejiang/1/2013 (A/H7N9) segment 6 (NA) 2562.4 0.000000e+00 1394/1398 (99%)
EPI452262 A/Taiwan/S02076/2013 (A/H7N9) segment 6 (NA) 2560.6 0.000000e+00 1394/1398 (99%)
EPI443661 A/Chicken/Hangzhou/48/2013 (A/H7N9) segment 6 (NA) 2560.6 0.000000e+00 1394/1398 (99%)
EPI442723 A/chicken/Zhejiang/DTID-ZJU01/2013 (A/H7N9) segment 6 (NA) 2555.0 0.000000e+00 1393/1398 (99%)
EPI441797 A/Zhejiang/DTID-ZJU01/2013 (A/H7N9) segment 6 (NA) 2555.0 0.000000e+00 1393/1398 (99%)
EPI443669 A/Chicken/Hangzhou/50/2013 (A/H7N9) segment 6 (NA) 2544.0 0.000000e+00 1391/1398 (99%)
EPI453606 A/Nanjing/1/2013 (A/H7N9) segment 6 (NA) 2538.4 0.000000e+00 1390/1398 (99%)
EPI453477 A/Zhejiang/HZ1/2013 (A/H7N9) segment 6 (NA) 2538.4 0.000000e+00 1390/1398 (99%)
EPI451333 A/Shanghai/Patient5/2013 (A/H7N9) segment 6 (NA) 2538.4 0.000000e+00 1388/1395 (99%)
EPI446965 A/Shanghai/4664T/2013 (A/H7N9) segment 6 (NA) 2538.4 0.000000e+00 1391/1399 (99%)
EPI440692 A/Environment/Shanghai/S1088/2013 (A/H7N9) segment 6 (NA) 2538.4 0.000000e+00 1390/1398 (99%)
EPI451325 A/Shanghai/Patient3/2013 (A/H7N9) segment 6 (NA) 2532.9 0.000000e+00 1388/1396 (99%)
EPI442714 A/Hangzhou/3/2013 (A/H7N9) segment 6 (NA) 2532.9 0.000000e+00 1389/1398 (99%)
EPI451255 A/Shanghai/Patient2/2013 (A/H7N9) segment 6 (NA) 2527.3 0.000000e+00 1387/1396 (99%)
EPI440684 A/Chicken/Shanghai/S1053/2013 (A/H7N9) segment 6 (NA) 2527.3 0.000000e+00 1388/1398 (99%)
EPI439487 A/Shanghai/1/2013 (A/H7N9) segment 6 (NA) 2527.3 0.000000e+00 1388/1398 (99%)
EPI451274 A/Shanghai/Patient6/2013 (A/H7N9) segment 6 (NA) 2510.7 0.000000e+00 1384/1396 (99%)
EPI452270 A/Taiwan/T02081/2013 (A/H7N9) segment 6 (NA) 2503.3 0.000000e+00 1363/1367 (99%)
EPI451148 A/chicken/Jiangsu/RD5/2013 (A/H10N9) segment 6 (NA) 2407.3 0.000000e+00 1379/1413 (97%)
EPI316754 A/mallard/Czech Republic/13438-29K/2010 (A/H11N9) segment 6 (NA) 2307.6 0.000000e+00 1362/1414 (96%)
EPI182380 A/Baikal Teal/Hongze/14/2005 (A/H11N9) segment 6 (NA) 2296.5 0.000000e+00 1361/1415 (96%)
EPI392623 A/wild bird/Korea/A14/11 (A/H7N9) segment 6 (NA) 2274.3 0.000000e+00 1337/1386 (96%)
EPI131887 A/sharp-tailed sandpiper/Australia/10/2004 (A/H11N9) segment 6 (NA) 2274.3 0.000000e+00 1356/1414 (95%)
EPI3243 A/duck/Hokkaido/W245/2004 (A/H11N9) segment 6 (NA) 2274.3 0.000000e+00 1356/1414 (95%)
EPI181663 A/duck/Tsukuba/239/2005 (A/H11N9) segment 6 (NA) 2268.8 0.000000e+00 1355/1414 (95%)
EPI69239 A/sharp-tailed sandpiper/Australia/6/2004 (A/H11N9) segment 6 (NA) 2268.8 0.000000e+00 1355/1414 (95%)
EPI181662 A/duck/Tsukuba/164/2005 (A/H11N9) segment 6 (NA) 2263.3 0.000000e+00 1354/1414 (95%)
EPI181661 A/duck/Tsukuba/441/2005 (A/H11N9) segment 6 (NA) 2257.7 0.000000e+00 1353/1414 (95%)
EPI392626 A/wild bird/Korea/A9/11 (A/H7N9) segment 6 (NA) 2252.2 0.000000e+00 1337/1392 (96%)
EPI225719 A/shorebird/Korea/S8/2006 (A/H11N9) segment 6 (NA) 2241.1 0.000000e+00 1351/1415 (95%)
EPI284343 A/Anas crecca/Spain/1460/2008 (A/H7N9) segment 6 (NA) 2235.6 0.000000e+00 1349/1414 (95%)
EPI181665 A/duck/Chiba/11/2006 (A/H11N9) segment 6 (NA) 2235.6 0.000000e+00 1348/1413 (95%)
EPI3119 A/duck/Siberia/700/1996 (A/H11N9) segment 6 (NA) 2235.6 0.000000e+00 1350/1415 (95%)
EPI181664 A/duck/Chiba/7/2006 (A/H11N9) segment 6 (NA) 2230.0 0.000000e+00 1347/1413 (95%)
EPI173714 A/duck/Mongolia/119/2008 (A/H7N9) segment 6 (NA) 2230.0 0.000000e+00 1349/1415 (95%)
EPI272800 A/mallard/PT/26153/2007 (A/H11N9) segment 6 (NA) 2215.3 0.000000e+00 1345/1414 (95%)
EPI236188 A/mallard/Sweden/49/2002 (A/H5N9) segment 6 (NA) 2207.9 0.000000e+00 1343/1413 (95%)
EPI2264 A/pintail/Shimane/324/98 (A/H1N9) segment 6 (NA) 2207.9 0.000000e+00 1343/1413 (95%)
EPI181668 A/duck/Chiba/23/2006 (A/H11N9) segment 6 (NA) 2202.3 0.000000e+00 1342/1413 (94%)
EPI181666 A/duck/Chiba/21/2006 (A/H11N9) segment 6 (NA) 2202.3 0.000000e+00 1342/1413 (94%)
EPI296330 A/mallard/Korea/LBM616/2007 (A/H11N9) segment 6 (NA) 2198.6 0.000000e+00 1337/1406 (95%)
EPI377904 A/mallard/Sweden/91/2005 (A/H2N9) segment 6 (NA) 2191.2 0.000000e+00 1340/1413 (94%)
EPI377880 A/mallard/Sweden/60/2005 (A/H0) segment 6 (NA) 2191.2 0.000000e+00 1340/1413 (94%)
EPI377863 A/mallard/Sweden/49/2005 (A/H2N9) segment 6 (NA) 2191.2 0.000000e+00 1340/1413 (94%)
EPI377855 A/mallard/Sweden/43/2005 (A/H2N9) segment 6 (NA) 2191.2 0.000000e+00 1340/1413 (94%)
EPI363965 A/duck/Hunan/1590/2007 (A/H6N9) segment 6 (NA) 2191.2 0.000000e+00 1341/1414 (94%)
EPI251787 A/mallard/Sweden/65/2002 (A/H10N9) segment 6 (NA) 2191.2 0.000000e+00 1340/1413 (94%)
EPI408364 A/wild duck/Korea/SH20-27/2008 (A/H7N9) segment 6 (NA) 2174.6 0.000000e+00 1339/1415 (94%)
EPI377920 A/mallard/Sweden/103/2005 (A/H2N9) segment 6 (NA) 2174.6 0.000000e+00 1337/1413 (94%)
EPI377888 A/mallard/Sweden/72/2005 (A/H2N9) segment 6 (NA) 2174.6 0.000000e+00 1337/1413 (94%)
EPI370846 A/duck/Nanchang/4-190/2000 (A/H2N9) segment 6 (NA) 2174.6 0.000000e+00 1337/1413 (94%)
EPI370838 A/duck/Nanchang/2-0492/2000 (A/H2N9) segment 6 (NA) 2174.6 0.000000e+00 1337/1413 (94%)
EPI370830 A/duck/Nanchang/2-0485/2000 (A/H2N9) segment 6 (NA) 2174.6 0.000000e+00 1337/1413 (94%)
EPI315141 A/duck/Vietnam/G32/2008 (A/H11N9) segment 6 (NA) 2174.6 0.000000e+00 1339/1415 (94%)
EPI277554 A/mallard/Sweden/36/2003 (A/H11N9) segment 6 (NA) 2174.6 0.000000e+00 1337/1413 (94%)
EPI251728 A/mallard/Sweden/48/2002 (A/H11N9) segment 6 (NA) 2174.6 0.000000e+00 1339/1415 (94%)
EPI220653 A/northern pintail/Aomori/1192/2008 (A/H5N9) segment 6 (NA) 2174.6 0.000000e+00 1341/1417 (94%)
EPI88970 A/Duck/Nanchang/2-0486/2000 (A/H2N9) segment 6 (NA) 2174.6 0.000000e+00 1337/1413 (94%)
EPI446516 A/environment/Jiangxi/26/2009 (A/H11N9) segment 6 (NA) 2169.1 0.000000e+00 1338/1415 (94%)
EPI392625 A/spot-billed duck/Korea/447/11 (A/H7N9) segment 6 (NA) 2169.1 0.000000e+00 1318/1386 (95%)
EPI88987 A/Duck/Nanchang/4-184/2000 (A/H2N9) segment 6 (NA) 2169.1 0.000000e+00 1336/1413 (94%)
EPI446523 A/environment/Jiangxi/28/2009 (A/H11N9) segment 6 (NA) 2163.5 0.000000e+00 1337/1415 (94%)
EPI377972 A/mallard/Netherlands/13/1999 (A/H0) segment 6 (NA) 2163.5 0.000000e+00 1335/1413 (94%)
EPI377963 A/mallard/Netherlands/12/1999 (A/H2N9) segment 6 (NA) 2163.5 0.000000e+00 1335/1413 (94%)
EPI377945 A/mallard/Netherlands/11/1999 (A/H2N9) segment 6 (NA) 2163.5 0.000000e+00 1335/1413 (94%)
EPI315133 A/duck/Vietnam/G30/2008 (A/H11N9) segment 6 (NA) 2163.5 0.000000e+00 1337/1415 (94%)
EPI251607 A/common teal/Netherlands/9/2000 (A/H11N9) segment 6 (NA) 2163.5 0.000000e+00 1335/1413 (94%)
EPI377650 A/mallard/Netherlands/13/2001 (A/H2N9) segment 6 (NA) 2158.0 0.000000e+00 1334/1413 (94%)
EPI451014 A/Shanghai/patient1/2013 (A/H7N9) segment 6 (NA) 2152.5 0.000000e+00 1167/1168 (99%)
EPI296602 A/mallard/Netherlands/42/2006 (A/H11N9) segment 6 (NA) 2146.9 0.000000e+00 1332/1413 (94%)
EPI262460 A/mallard/Switzerland/WV1071028/2007 (A/H11N9) segment 6 (NA) 2124.8 0.000000e+00 1329/1414 (93%)
EPI3185 A/swan/Shimane/190/2001 (A/H6N9) segment 6 (NA) 2119.2 0.000000e+00 1329/1415 (93%)
EPI284351 A/goose/Czech Republic/1848-T14/2009 (A/H7N9) segment 6 (NA) 2108.1 0.000000e+00 1326/1414 (93%)
EPI3019 A/swan/Shimane/227/01 (A/H3N9) segment 6 (NA) 2108.1 0.000000e+00 1327/1415 (93%)
EPI215511 A/goose/Czech Republic/1848/2009 (A/H7N9) segment 6 (NA) 2104.5 0.000000e+00 1325/1414 (93%)
EPI268307 A/wild duck/Shantou/311/2001 (A/H6N9) segment 6 (NA) 2091.5 0.000000e+00 1324/1415 (93%)
EPI433414 A/mallard/Czech Republic/15962-4T/2010 (A/H6N9) segment 6 (NA) 2063.8 0.000000e+00 1319/1415 (93%)
EPI433388 A/mallard/Czech Republic/15902-18K/2009 (A/H6N9) segment 6 (NA) 2063.8 0.000000e+00 1319/1415 (93%)
EPI367599 A/mallard/Czech Republic/15962-1T/2010 (A/H6N9) segment 6 (NA) 2063.8 0.000000e+00 1319/1415 (93%)
EPI314710 A/mallard/Czech Republic/15902-18K/2009 (A/H11N9) segment 6 (NA) 2063.8 0.000000e+00 1319/1415 (93%)
EPI392624 A/wild bird/Korea/A3/11 (A/H7N9) segment 6 (NA) 2062.0 0.000000e+00 1312/1405 (93%)
EPI256764 A/muscovy duck/Thailand/CU-LM1984/2009 (A/H4N9) segment 6 (NA) 2043.5 0.000000e+00 1278/1358 (94%)
EPI418281 A/duck/Vietnam/G17-1/2011 (A/H11N9) segment 6 (NA) 2039.8 0.000000e+00 1318/1419 (92%)
EPI297500 A/mallard/New Zealand/1365-350/2005 (A/H6N9) segment 6 (NA) 2030.6 0.000000e+00 1313/1415 (92%)

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PostPosted: Wed Jun 26, 2013 12:13 pm 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI443678 A/Environment/Hangzhou/109/2013 (A/H7N9) segment 7 (MP) 1814.5 0.000000e+00 982/982 (100%)
EPI351714 A/chicken/Zhejiang/607/2011 (A/H9N2) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%)
EPI351713 A/chicken/Zhejiang/329/2011 (A/H9N2) segment 7 (MP) 1797.9 0.000000e+00 979/982 (99%)
EPI342595 A/chicken/Jiangsu/Q3/2010 (A/H9N2) segment 7 (MP) 1792.4 0.000000e+00 978/982 (99%)
EPI390597 A/chicken/Wuxi/7/2010 (A/H9N2) segment 7 (MP) 1790.5 0.000000e+00 973/975 (99%)
EPI390601 A/chicken/Taixing/10/2010 (A/H9N2) segment 7 (MP) 1785.0 0.000000e+00 972/975 (99%)
EPI390598 A/chicken/Yangzhou/11/2010 (A/H9N2) segment 7 (MP) 1785.0 0.000000e+00 972/975 (99%)
EPI352572 A/equine/Guangxi/3/2011 (A/H9N2) segment 7 (MP) 1781.3 0.000000e+00 976/982 (99%)
EPI441164 A/swine/Henan/Y1/2009 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%)
EPI423870 A/brambling/Beijing/16/2012 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%)
EPI317184 A/chicken/China/AH-10-01/2010 (A/H9N2) segment 7 (MP) 1775.8 0.000000e+00 975/982 (99%)
EPI390592 A/chicken/Jiawang/2/2011 (A/H9N2) segment 7 (MP) 1773.9 0.000000e+00 970/975 (99%)
EPI390589 A/chicken/Tongshan/1/2011 (A/H9N2) segment 7 (MP) 1773.9 0.000000e+00 970/975 (99%)
EPI453610 A/environment/Nanjing/2913/2013 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%)
EPI453607 A/Nanjing/1/2013 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%)
EPI446459 A/Hangzhou/3/2013 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%)
EPI445915 A/Taiwan/1/2013 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%)
EPI443654 A/Environment/Hangzhou/37/2013 (A/H7N9) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%)
EPI441093 A/duck/Shanghai/C164/2009 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%)
EPI416210 A/chicken/Shanghai/C1/2012 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 974/982 (99%)
EPI351715 A/chicken/Zhejiang/611/2011 (A/H9N2) segment 7 (MP) 1770.2 0.000000e+00 975/983 (99%)
EPI390590 A/pigeon/Xuzhou/1/2011 (A/H9N2) segment 7 (MP) 1768.4 0.000000e+00 969/975 (99%)
EPI453481 A/Zhejiang/HZ1/2013 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%)
EPI452263 A/Taiwan/S02076/2013 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%)
EPI451334 A/Shanghai/Patient5/2013 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%)
EPI451257 A/Shanghai/Patient2/2013 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%)
EPI443662 A/Chicken/Hangzhou/48/2013 (A/H7N9) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%)
EPI441165 A/swine/Shanghai/Y1/2009 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%)
EPI416655 A/chicken/Shandong/KD/2009 (A/H9N2) segment 7 (MP) 1764.7 0.000000e+00 973/982 (99%)
EPI390593 A/chicken/Dawang/1/2011 (A/H9N2) segment 7 (MP) 1762.8 0.000000e+00 968/975 (99%)
EPI390591 A/chicken/Xigou/1/2011 (A/H9N2) segment 7 (MP) 1762.8 0.000000e+00 968/975 (99%)
EPI390587 A/chicken/Shuanggou/1/2011 (A/H9N2) segment 7 (MP) 1762.8 0.000000e+00 968/975 (99%)
EPI450834 A/quail/Hangzhou/35/2013 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%)
EPI441092 A/duck/Shanghai/C163/2009 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%)
EPI416212 A/chicken/Shanghai/C3/2012 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%)
EPI416211 A/chicken/Shanghai/C2/2012 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%)
EPI342588 A/chicken/Zhejiang/Q1D4/2010 (A/H9N2) segment 7 (MP) 1759.1 0.000000e+00 972/982 (98%)
EPI390588 A/chicken/Yongcheng/1/2011 (A/H9N2) segment 7 (MP) 1757.3 0.000000e+00 968/976 (99%)
EPI416639 A/chicken/Shandong/BD/2010 (A/H9N2) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%)
EPI416615 A/chicken/Shandong/02/2010 (A/H9N2) segment 7 (MP) 1753.6 0.000000e+00 971/982 (98%)
EPI451173 A/chicken/Guangdong/LG1/2013 (A/H9N2) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%)
EPI439493 A/Shanghai/1/2013 (A/H7N9) segment 7 (MP) 1748.1 0.000000e+00 970/982 (98%)
EPI296164 A/swine/Taizhou/5/2008 (A/H9N2) segment 7 (MP) 1748.1 0.000000e+00 971/983 (98%)
EPI451326 A/Shanghai/Patient3/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI451275 A/Shanghai/Patient6/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI451268 A/Shanghai/Patient4/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI446961 A/Shanghai/4664T/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI446748 A/Fujian/1/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI446454 A/Hangzhou/2/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI443573 A/Environment/Hangzhou/34/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI443030 A/Zhejiang/01/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI443027 A/Shanghai/4/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI443024 A/Shanghai/3/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI440097 A/Hangzhou/1/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI439506 A/Anhui/1/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI439497 A/Shanghai/2/2013 (A/H7N9) segment 7 (MP) 1742.5 0.000000e+00 969/982 (98%)
EPI398976 A/chicken/Hebei/1102/2010 (A/H5N2) segment 7 (MP) 1742.5 0.000000e+00 970/983 (98%)
EPI443037 A/Zhejiang/1/2013 (A/H7N9) segment 7 (MP) 1738.8 0.000000e+00 968/982 (98%)
EPI451019 A/Shanghai/patient1/2013 (A/H7N9) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%)
EPI443670 A/Chicken/Hangzhou/50/2013 (A/H7N9) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%)
EPI442724 A/chicken/Zhejiang/DTID-ZJU01/2013 (A/H7N9) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%)
EPI441798 A/Zhejiang/DTID-ZJU01/2013 (A/H7N9) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%)
EPI440696 A/Pigeon/Shanghai/S1069/2013 (A/H7N9) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%)
EPI440688 A/Environment/Shanghai/S1088/2013 (A/H7N9) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%)
EPI440680 A/Chicken/Shanghai/S1053/2013 (A/H7N9) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%)
EPI416647 A/chicken/Shandong/H/2009 (A/H9N2) segment 7 (MP) 1737.0 0.000000e+00 968/982 (98%)
EPI416623 A/chicken/Shandong/03/2010 (A/H9N2) segment 7 (MP) 1737.0 0.000000e+00 969/983 (98%)
EPI390602 A/chicken/Xiangshui/1/2011 (A/H9N2) segment 7 (MP) 1735.1 0.000000e+00 963/975 (98%)
EPI443045 A/Zhejiang/2/2013 (A/H7N9) segment 7 (MP) 1733.3 0.000000e+00 967/982 (98%)
EPI441091 A/duck/Shanghai/C60/2007 (A/H9N2) segment 7 (MP) 1731.4 0.000000e+00 967/982 (98%)
EPI457888 A/chicken/Guangxi/GXc-1/2011 (A/H1N2) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%)
EPI341719 A/chicken/Guangdong/ZCY/2011 (A/H9N2) segment 7 (MP) 1725.9 0.000000e+00 966/982 (98%)
EPI382218 A/chicken/Vietnam/OIE-1611/2012 (A/H9N2) segment 7 (MP) 1716.7 0.000000e+00 939/944 (99%)
EPI272192 A/chicken/Shandong/HY/2009 (A/H9N2) segment 7 (MP) 1716.7 0.000000e+00 951/962 (98%)
EPI390600 A/quail/Wuxi/7/2010 (A/H9N2) segment 7 (MP) 1713.0 0.000000e+00 959/975 (98%)
EPI390594 A/chicken/Qianzhou/12/2010 (A/H9N2) segment 7 (MP) 1713.0 0.000000e+00 960/976 (98%)
EPI295944 A/chicken/Hebei/0329/2007 (A/H9N2) segment 7 (MP) 1709.3 0.000000e+00 963/982 (98%)
EPI349885 A/chicken/Vietnam/NCVD-080/2008 (A/H5N1) segment 7 (MP) 1703.7 0.000000e+00 962/982 (97%)
EPI390599 A/duck/Wuxi/7/2010 (A/H9N2) segment 7 (MP) 1701.9 0.000000e+00 957/975 (98%)
EPI120955 A/chukkar/Shantou/89/2005 (A/H6N1) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%)
EPI120943 A/guinea fowl/Shantou/7211/2004 (A/H6N1) segment 7 (MP) 1698.2 0.000000e+00 962/983 (97%)
EPI416591 A/chicken/Shandong/02/2008 (A/H9N2) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%)
EPI313921 A/chicken/Tibet/S4/2009 (A/H9N2) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%)
EPI313913 A/chicken/Tibet/S1/2009 (A/H9N2) segment 7 (MP) 1692.7 0.000000e+00 960/982 (97%)
EPI295938 A/chicken/Shandong/1/2006 (A/H9N2) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%)
EPI268312 A/duck/Shantou/1275/2004 (A/H6N1) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%)
EPI120847 A/chukkar/Shantou/1201/2004 (A/H6N1) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%)
EPI120841 A/chukkar/Shantou/795/2004 (A/H6N1) segment 7 (MP) 1692.7 0.000000e+00 961/983 (97%)
EPI349892 A/chicken/Vietnam/NCVD-081/2008 (A/H5N1) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%)
EPI332567 A/duck/Shandong/009/2008 (A/H5N1) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%)
EPI314015 A/duck/Tibet/S2/2009 (A/H9N2) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%)
EPI296172 A/swine/Yangzhou/1/2008 (A/H9N2) segment 7 (MP) 1687.1 0.000000e+00 959/982 (97%)
EPI295942 A/chicken/Hebei/0822/2007 (A/H9N2) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%)
EPI295932 A/duck/Beijing/31/2005 (A/H9N2) segment 7 (MP) 1687.1 0.000000e+00 960/983 (97%)
EPI295935 A/chicken/Shandong/1231/2008 (A/H9N2) segment 7 (MP) 1685.3 0.000000e+00 956/978 (97%)
EPI295943 A/chicken/Hebei/0617/2007 (A/H9N2) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%)
EPI295940 A/chicken/Hebei/LC/2008 (A/H9N2) segment 7 (MP) 1681.6 0.000000e+00 960/984 (97%)
EPI270076 A/chicken/Henan/1.2/2008 (A/H9N2) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%)
EPI259508 A/swine/Hebei/012/2008 (A/H9N2) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%)
EPI246033 A/chicken/Hebei/4/2008 (A/H9N2) segment 7 (MP) 1681.6 0.000000e+00 959/983 (97%)

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PostPosted: Wed Jun 26, 2013 12:15 pm 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI443672 A/Environment/Hangzhou/109/2013 (A/H7N9) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%)
EPI442718 A/chicken/Zhejiang/DTID-ZJU01/2013 (A/H7N9) segment 1 (PB2) 4205.9 0.000000e+00 2279/2280 (99%)
EPI442715 A/Environment/Hangzhou/34/2013 (A/H7N9) segment 1 (PB2) 4205.9 0.000000e+00 2279/2280 (99%)
EPI440690 A/Environment/Shanghai/S1088/2013 (A/H7N9) segment 1 (PB2) 4200.4 0.000000e+00 2278/2280 (99%)
EPI443664 A/Chicken/Hangzhou/50/2013 (A/H7N9) segment 1 (PB2) 4194.9 0.000000e+00 2277/2280 (99%)
EPI443648 A/Environment/Hangzhou/37/2013 (A/H7N9) segment 1 (PB2) 4194.9 0.000000e+00 2277/2280 (99%)
EPI439504 A/Anhui/1/2013 (A/H7N9) segment 1 (PB2) 4194.9 0.000000e+00 2277/2280 (99%)
EPI443039 A/Zhejiang/2/2013 (A/H7N9) segment 1 (PB2) 4191.2 0.000000e+00 2276/2280 (99%)
EPI453622 A/environment/Nanjing/2913/2013 (A/H7N9) segment 1 (PB2) 4189.3 0.000000e+00 2276/2280 (99%)
EPI446963 A/Shanghai/4664T/2013 (A/H7N9) segment 1 (PB2) 4189.3 0.000000e+00 2276/2280 (99%)
EPI441801 A/Zhejiang/DTID-ZJU01/2013 (A/H7N9) segment 1 (PB2) 4189.3 0.000000e+00 2276/2280 (99%)
EPI440698 A/Pigeon/Shanghai/S1069/2013 (A/H7N9) segment 1 (PB2) 4189.3 0.000000e+00 2276/2280 (99%)
EPI440682 A/Chicken/Shanghai/S1053/2013 (A/H7N9) segment 1 (PB2) 4189.3 0.000000e+00 2276/2280 (99%)
EPI445909 A/Taiwan/1/2013 (A/H7N9) segment 1 (PB2) 4183.8 0.000000e+00 2275/2280 (99%)
EPI441601 A/Hangzhou/1/2013 (A/H7N9) segment 1 (PB2) 4183.8 0.000000e+00 2275/2280 (99%)
EPI439495 A/Shanghai/2/2013 (A/H7N9) segment 1 (PB2) 4183.8 0.000000e+00 2275/2280 (99%)
EPI443031 A/Zhejiang/1/2013 (A/H7N9) segment 1 (PB2) 4176.4 0.000000e+00 2273/2280 (99%)
EPI453601 A/Nanjing/1/2013 (A/H7N9) segment 1 (PB2) 4172.7 0.000000e+00 2273/2280 (99%)
EPI453482 A/Zhejiang/HZ1/2013 (A/H7N9) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%)
EPI442712 A/Hangzhou/3/2013 (A/H7N9) segment 1 (PB2) 4167.2 0.000000e+00 2272/2280 (99%)
EPI439488 A/Shanghai/1/2013 (A/H7N9) segment 1 (PB2) 4156.1 0.000000e+00 2270/2280 (99%)
EPI452265 A/Taiwan/T02081/2013 (A/H7N9) segment 1 (PB2) 4150.5 0.000000e+00 2257/2262 (99%)
EPI453827 A/Fujian/1/2013 (A/H7N9) segment 1 (PB2) 4145.0 0.000000e+00 2265/2275 (99%)
EPI452257 A/Taiwan/S02076/2013 (A/H7N9) segment 1 (PB2) 4141.3 0.000000e+00 2256/2263 (99%)
EPI442709 A/Hangzhou/2/2013 (A/H7N9) segment 1 (PB2) 4117.3 0.000000e+00 2263/2280 (99%)
EPI423829 A/brambling/Beijing/16/2012 (A/H9N2) segment 1 (PB2) 4111.8 0.000000e+00 2262/2280 (99%)
EPI351707 A/chicken/Zhejiang/329/2011 (A/H9N2) segment 1 (PB2) 4054.5 0.000000e+00 2251/2279 (98%)
EPI416228 A/chicken/Shanghai/C1/2012 (A/H9N2) segment 1 (PB2) 4037.9 0.000000e+00 2250/2281 (98%)
EPI443656 A/Chicken/Hangzhou/48/2013 (A/H7N9) segment 1 (PB2) 4034.2 0.000000e+00 2248/2280 (98%)
EPI450828 A/quail/Hangzhou/35/2013 (A/H9N2) segment 1 (PB2) 4023.1 0.000000e+00 2246/2280 (98%)
EPI441114 A/duck/Shanghai/C164/2009 (A/H9N2) segment 1 (PB2) 3977.0 0.000000e+00 2237/2279 (98%)
EPI342590 A/chicken/Jiangsu/Q3/2010 (A/H9N2) segment 1 (PB2) 3964.0 0.000000e+00 2236/2281 (98%)
EPI441377 A/swine/Shanghai/Y1/2009 (A/H9N2) segment 1 (PB2) 3956.6 0.000000e+00 2234/2280 (97%)
EPI385892 A/chicken/Anhui/HF/2010 (A/H9N2) segment 1 (PB2) 3945.6 0.000000e+00 2232/2280 (97%)
EPI342583 A/chicken/Zhejiang/Q1D4/2010 (A/H9N2) segment 1 (PB2) 3940.0 0.000000e+00 2232/2281 (97%)
EPI398952 A/chicken/Hebei/1102/2010 (A/H5N2) segment 1 (PB2) 3934.5 0.000000e+00 2230/2280 (97%)
EPI416633 A/chicken/Shandong/BD/2010 (A/H9N2) segment 1 (PB2) 3928.9 0.000000e+00 2229/2280 (97%)
EPI416641 A/chicken/Shandong/H/2009 (A/H9N2) segment 1 (PB2) 3917.9 0.000000e+00 2227/2280 (97%)
EPI416609 A/chicken/Shandong/02/2010 (A/H9N2) segment 1 (PB2) 3916.0 0.000000e+00 2226/2279 (97%)
EPI416617 A/chicken/Shandong/03/2010 (A/H9N2) segment 1 (PB2) 3906.8 0.000000e+00 2225/2280 (97%)
EPI390495 A/chicken/Jiawang/2/2011 (A/H9N2) segment 1 (PB2) 3906.8 0.000000e+00 2213/2262 (97%)
EPI390492 A/chicken/Yongcheng/1/2011 (A/H9N2) segment 1 (PB2) 3906.8 0.000000e+00 2213/2262 (97%)
EPI441113 A/duck/Shanghai/C163/2009 (A/H9N2) segment 1 (PB2) 3904.9 0.000000e+00 2224/2279 (97%)
EPI390493 A/chicken/Tongshan/1/2011 (A/H9N2) segment 1 (PB2) 3895.7 0.000000e+00 2211/2262 (97%)
EPI390500 A/chicken/Wuxi/7/2010 (A/H9N2) segment 1 (PB2) 3879.1 0.000000e+00 2209/2263 (97%)
EPI416230 A/chicken/Shanghai/C3/2012 (A/H9N2) segment 1 (PB2) 3877.2 0.000000e+00 2222/2282 (97%)
EPI416229 A/chicken/Shanghai/C2/2012 (A/H9N2) segment 1 (PB2) 3866.2 0.000000e+00 2220/2282 (97%)
EPI352576 A/equine/Guangxi/3/2011 (A/H9N2) segment 1 (PB2) 3858.8 0.000000e+00 2216/2280 (97%)
EPI341714 A/chicken/Guangdong/ZCY/2011 (A/H9N2) segment 1 (PB2) 3856.9 0.000000e+00 2217/2281 (97%)
EPI341706 A/chicken/Guangdong/ZHJ/2011 (A/H9N2) segment 1 (PB2) 3856.9 0.000000e+00 2216/2280 (97%)
EPI390497 A/chicken/Qianzhou/12/2010 (A/H9N2) segment 1 (PB2) 3851.4 0.000000e+00 2203/2262 (97%)
EPI351708 A/chicken/Zhejiang/607/2011 (A/H9N2) segment 1 (PB2) 3844.0 0.000000e+00 2214/2280 (97%)
EPI326107 A/canine/Guangxi/1/2011/H9N2 (A/H9N2) segment 1 (PB2) 3844.0 0.000000e+00 2211/2280 (96%)
EPI451168 A/chicken/Guangdong/LG1/2013 (A/H9N2) segment 1 (PB2) 3834.8 0.000000e+00 2212/2280 (97%)
EPI458983 A/chicken/Jiangsu/1001/2013 (A/H5N2) segment 1 (PB2) 3801.5 0.000000e+00 2206/2280 (96%)
EPI296166 A/swine/Yangzhou/1/2008 (A/H9N2) segment 1 (PB2) 3792.3 0.000000e+00 2203/2278 (96%)
EPI186186 A/chicken/Shanghai/Y1/2008 (A/H9N2) segment 1 (PB2) 3759.1 0.000000e+00 2144/2198 (97%)
EPI441376 A/swine/Henan/Y1/2009 (A/H9N2) segment 1 (PB2) 3755.4 0.000000e+00 2198/2280 (96%)
EPI441109 A/duck/Shanghai/C60/2007 (A/H9N2) segment 1 (PB2) 3755.4 0.000000e+00 2197/2279 (96%)
EPI221853 A/chicken/Zhejiang/HJ/2007 (A/H9N2) segment 1 (PB2) 3722.1 0.000000e+00 2191/2279 (96%)
EPI295922 A/chicken/Jiangxi/12/2007 (A/H9N2) segment 1 (PB2) 3718.4 0.000000e+00 2170/2248 (96%)
EPI342576 A/chicken/Fujian/G9/2009 (A/H9N2) segment 1 (PB2) 3716.6 0.000000e+00 2191/2280 (96%)
EPI314378 A/chicken/Shanghai/Q0704/2007 (A/H9N2) segment 1 (PB2) 3712.9 0.000000e+00 2133/2194 (97%)
EPI326728 A/environment/Korea/ESD11/2003 (A/H3N2) segment 1 (PB2) 3696.3 0.000000e+00 2181/2271 (96%)
EPI272232 A/chicken/Shandong/SG2/2009 (A/H9N2) segment 1 (PB2) 3674.1 0.000000e+00 2185/2282 (95%)
EPI332573 A/duck/Shandong/009/2008 (A/H5N1) segment 1 (PB2) 3672.3 0.000000e+00 2182/2279 (95%)
EPI314577 A/chicken/Shanghai/Q0812-2/2008 (A/H9N2) segment 1 (PB2) 3668.6 0.000000e+00 2125/2194 (96%)
EPI363484 A/duck/Guangxi/2736/2006 (A/H6N8) segment 1 (PB2) 3666.7 0.000000e+00 2181/2279 (95%)
EPI363468 A/duck/Guangxi/1248/2006 (A/H6N2) segment 1 (PB2) 3666.7 0.000000e+00 2182/2280 (95%)
EPI314576 A/chicken/Shanghai/Q0812-1/2008 (A/H9N2) segment 1 (PB2) 3663.0 0.000000e+00 2124/2194 (96%)
EPI363460 A/duck/Guangxi/1157/2006 (A/H6N2) segment 1 (PB2) 3661.2 0.000000e+00 2181/2280 (95%)
EPI326722 A/environment/Korea/ESD18/2004 (A/H3N6) segment 1 (PB2) 3661.2 0.000000e+00 2180/2279 (95%)
EPI401358 A/wild bird/Korea/YJ117/2007 (A/H4N6) segment 1 (PB2) 3655.6 0.000000e+00 2179/2279 (95%)
EPI269181 A/duck/Guangxi/141/2005 (A/H6N2) segment 1 (PB2) 3655.6 0.000000e+00 2179/2279 (95%)
EPI313915 A/chicken/Tibet/S4/2009 (A/H9N2) segment 1 (PB2) 3651.9 0.000000e+00 2180/2281 (95%)
EPI269300 A/duck/Guangxi/1455/2004 (A/H6N5) segment 1 (PB2) 3650.1 0.000000e+00 2179/2280 (95%)
EPI269157 A/mallard/Jiangxi/7787/2003 (A/H6N1) segment 1 (PB2) 3650.1 0.000000e+00 2178/2279 (95%)
EPI390529 A/pigeon/Xuzhou/1/2011 (A/H9N2) segment 1 (PB2) 3646.4 0.000000e+00 2167/2263 (95%)
EPI351709 A/chicken/Zhejiang/611/2011 (A/H9N2) segment 1 (PB2) 3644.6 0.000000e+00 2178/2280 (95%)
EPI269299 A/mallard/Jiangxi/8341/2004 (A/H6N5) segment 1 (PB2) 3644.6 0.000000e+00 2177/2279 (95%)
EPI140276 A/migratory duck/Hong Kong/MP2553/2003 (A/H8N4) segment 1 (PB2) 3644.6 0.000000e+00 2177/2279 (95%)
EPI2964 A/duck/Hokkaido/120/2001 (A/H6N2) segment 1 (PB2) 3644.6 0.000000e+00 2177/2279 (95%)
EPI390498 A/chicken/Anhui/10/2009 (A/H9N2) segment 1 (PB2) 3640.9 0.000000e+00 2165/2262 (95%)
EPI363476 A/duck/Guangxi/2140/2006 (A/H6N2) segment 1 (PB2) 3639.0 0.000000e+00 2176/2279 (95%)
EPI269298 A/mallard/Jiangxi/8346/2004 (A/H6N5) segment 1 (PB2) 3639.0 0.000000e+00 2177/2280 (95%)
EPI269296 A/duck/Hunan/748/2005 (A/H6N5) segment 1 (PB2) 3639.0 0.000000e+00 2177/2280 (95%)
EPI363492 A/duck/Guangxi/3333/2006 (A/H6N1) segment 1 (PB2) 3633.5 0.000000e+00 2175/2279 (95%)
EPI299313 A/avian/Japan/8KI0068/2008 (A/H3N6) segment 1 (PB2) 3633.5 0.000000e+00 2175/2279 (95%)
EPI299289 A/avian/Japan/8KI0135/2008 (A/H6N5) segment 1 (PB2) 3633.5 0.000000e+00 2175/2279 (95%)
EPI390499 A/chicken/Hubei/10/2009 (A/H9N2) segment 1 (PB2) 3629.8 0.000000e+00 2164/2263 (95%)
EPI390491 A/chicken/Shuanggou/1/2011 (A/H9N2) segment 1 (PB2) 3629.8 0.000000e+00 2164/2263 (95%)
EPI326724 A/environment/Korea/CSM05/2004 (A/H3N1) segment 1 (PB2) 3629.8 0.000000e+00 2173/2277 (95%)
EPI441823 A/African Stonechat/Vietnam/8/2009 (A/H9N2) segment 1 (PB2) 3627.9 0.000000e+00 2175/2280 (95%)
EPI441822 A/Rock Pigeon/Vietnam/6/2009 (A/H9N2) segment 1 (PB2) 3627.9 0.000000e+00 2175/2280 (95%)
EPI441803 A/Japanese Quail/Vietnam/4/2009 (A/H9N2) segment 1 (PB2) 3627.9 0.000000e+00 2175/2280 (95%)
EPI317178 A/chicken/China/AH-10-01/2010 (A/H9N2) segment 1 (PB2) 3627.9 0.000000e+00 2175/2280 (95%)
EPI299305 A/avian/Japan/8KI0102/2008 (A/H3N8) segment 1 (PB2) 3627.9 0.000000e+00 2174/2279 (95%)
EPI299273 A/avian/Japan/8KI0162/2008 (A/H3N8) segment 1 (PB2) 3627.9 0.000000e+00 2174/2279 (95%)
EPI296282 A/wild duck/Korea/YS44/2004 (A/H1N2) segment 1 (PB2) 3627.9 0.000000e+00 2166/2267 (95%)
EPI416691 A/chicken/Shandong/01/2009 (A/H9N2) segment 1 (PB2) 3624.2 0.000000e+00 2175/2281 (95%)

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PostPosted: Wed Jun 26, 2013 12:17 pm 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI443673 A/Environment/Hangzhou/109/2013 (A/H7N9) segment 2 (PB1) 4200.4 0.000000e+00 2274/2274 (100%)
EPI450829 A/quail/Hangzhou/35/2013 (A/H9N2) segment 2 (PB1) 4167.2 0.000000e+00 2268/2274 (99%)
EPI443649 A/Environment/Hangzhou/37/2013 (A/H7N9) segment 2 (PB1) 4161.6 0.000000e+00 2267/2274 (99%)
EPI443657 A/Chicken/Hangzhou/48/2013 (A/H7N9) segment 2 (PB1) 4156.1 0.000000e+00 2266/2274 (99%)
EPI446456 A/Hangzhou/3/2013 (A/H7N9) segment 2 (PB1) 4133.9 0.000000e+00 2262/2274 (99%)
EPI423865 A/brambling/Beijing/16/2012 (A/H9N2) segment 2 (PB1) 4106.2 0.000000e+00 2257/2274 (99%)
EPI443570 A/Environment/Hangzhou/34/2013 (A/H7N9) segment 2 (PB1) 4021.3 0.000000e+00 2241/2273 (98%)
EPI439508 A/Anhui/1/2013 (A/H7N9) segment 2 (PB1) 4017.6 0.000000e+00 2241/2274 (98%)
EPI446450 A/Hangzhou/2/2013 (A/H7N9) segment 2 (PB1) 4012.0 0.000000e+00 2240/2274 (98%)
EPI440691 A/Environment/Shanghai/S1088/2013 (A/H7N9) segment 2 (PB1) 4012.0 0.000000e+00 2240/2274 (98%)
EPI342591 A/chicken/Jiangsu/Q3/2010 (A/H9N2) segment 2 (PB1) 4012.0 0.000000e+00 2240/2274 (98%)
EPI453478 A/Zhejiang/HZ1/2013 (A/H7N9) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%)
EPI443040 A/Zhejiang/2/2013 (A/H7N9) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%)
EPI442719 A/chicken/Zhejiang/DTID-ZJU01/2013 (A/H7N9) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%)
EPI441800 A/Zhejiang/DTID-ZJU01/2013 (A/H7N9) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%)
EPI440683 A/Chicken/Shanghai/S1053/2013 (A/H7N9) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%)
EPI439501 A/Shanghai/2/2013 (A/H7N9) segment 2 (PB1) 4006.5 0.000000e+00 2239/2274 (98%)
EPI453621 A/environment/Nanjing/2913/2013 (A/H7N9) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%)
EPI441108 A/duck/Shanghai/C164/2009 (A/H9N2) segment 2 (PB1) 4001.0 0.000000e+00 2238/2274 (98%)
EPI441107 A/duck/Shanghai/C163/2009 (A/H9N2) segment 2 (PB1) 4001.0 0.000000e+00 2239/2275 (98%)
EPI446964 A/Shanghai/4664T/2013 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2237/2274 (98%)
EPI445910 A/Taiwan/1/2013 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2237/2274 (98%)
EPI443032 A/Zhejiang/1/2013 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2237/2274 (98%)
EPI441600 A/Hangzhou/1/2013 (A/H7N9) segment 2 (PB1) 3995.4 0.000000e+00 2237/2274 (98%)
EPI385891 A/chicken/Anhui/HF/2010 (A/H9N2) segment 2 (PB1) 3995.4 0.000000e+00 2238/2275 (98%)
EPI439489 A/Shanghai/1/2013 (A/H7N9) segment 2 (PB1) 3984.3 0.000000e+00 2235/2274 (98%)
EPI351710 A/chicken/Zhejiang/329/2011 (A/H9N2) segment 2 (PB1) 3977.0 0.000000e+00 2233/2273 (98%)
EPI453828 A/Fujian/1/2013 (A/H7N9) segment 2 (PB1) 3971.4 0.000000e+00 2232/2273 (98%)
EPI452266 A/Taiwan/T02081/2013 (A/H7N9) segment 2 (PB1) 3969.6 0.000000e+00 2225/2263 (98%)
EPI453602 A/Nanjing/1/2013 (A/H7N9) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%)
EPI416227 A/chicken/Shanghai/C3/2012 (A/H9N2) segment 2 (PB1) 3967.7 0.000000e+00 2232/2274 (98%)
EPI452258 A/Taiwan/S02076/2013 (A/H7N9) segment 2 (PB1) 3962.2 0.000000e+00 2221/2259 (98%)
EPI416650 A/chicken/Shandong/KD/2009 (A/H9N2) segment 2 (PB1) 3962.2 0.000000e+00 2231/2274 (98%)
EPI416610 A/chicken/Shandong/02/2010 (A/H9N2) segment 2 (PB1) 3960.3 0.000000e+00 2216/2252 (98%)
EPI351711 A/chicken/Zhejiang/607/2011 (A/H9N2) segment 2 (PB1) 3960.3 0.000000e+00 2230/2273 (98%)
EPI416642 A/chicken/Shandong/H/2009 (A/H9N2) segment 2 (PB1) 3954.8 0.000000e+00 2216/2253 (98%)
EPI296159 A/swine/Taizhou/5/2008 (A/H9N2) segment 2 (PB1) 3951.1 0.000000e+00 2230/2275 (98%)
EPI416225 A/chicken/Shanghai/C1/2012 (A/H9N2) segment 2 (PB1) 3949.3 0.000000e+00 2228/2273 (98%)
EPI416634 A/chicken/Shandong/BD/2010 (A/H9N2) segment 2 (PB1) 3943.7 0.000000e+00 2213/2252 (98%)
EPI342584 A/chicken/Zhejiang/Q1D4/2010 (A/H9N2) segment 2 (PB1) 3940.0 0.000000e+00 2227/2274 (97%)
EPI416618 A/chicken/Shandong/03/2010 (A/H9N2) segment 2 (PB1) 3932.6 0.000000e+00 2211/2252 (98%)
EPI341707 A/chicken/Guangdong/ZHJ/2011 (A/H9N2) segment 2 (PB1) 3928.9 0.000000e+00 2225/2274 (97%)
EPI296167 A/swine/Yangzhou/1/2008 (A/H9N2) segment 2 (PB1) 3917.9 0.000000e+00 2223/2274 (97%)
EPI441378 A/swine/Shanghai/Y1/2009 (A/H9N2) segment 2 (PB1) 3906.8 0.000000e+00 2223/2276 (97%)
EPI341715 A/chicken/Guangdong/ZCY/2011 (A/H9N2) segment 2 (PB1) 3901.2 0.000000e+00 2221/2275 (97%)
EPI317179 A/chicken/China/AH-10-01/2010 (A/H9N2) segment 2 (PB1) 3901.2 0.000000e+00 2220/2274 (97%)
EPI441375 A/swine/Henan/Y1/2009 (A/H9N2) segment 2 (PB1) 3895.7 0.000000e+00 2220/2275 (97%)
EPI221859 A/chicken/Zhejiang/HJ/2007 (A/H9N2) segment 2 (PB1) 3893.9 0.000000e+00 2204/2252 (97%)
EPI451169 A/chicken/Guangdong/LG1/2013 (A/H9N2) segment 2 (PB1) 3879.1 0.000000e+00 2217/2275 (97%)
EPI352575 A/equine/Guangxi/3/2011 (A/H9N2) segment 2 (PB1) 3879.1 0.000000e+00 2216/2274 (97%)
EPI390514 A/chicken/Wuxi/7/2010 (A/H9N2) segment 2 (PB1) 3871.7 0.000000e+00 2174/2213 (98%)
EPI326108 A/canine/Guangxi/1/2011/H9N2 (A/H9N2) segment 2 (PB1) 3868.0 0.000000e+00 2214/2274 (97%)
EPI398956 A/chicken/Hebei/1102/2010 (A/H5N2) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%)
EPI351712 A/chicken/Zhejiang/611/2011 (A/H9N2) segment 2 (PB1) 3862.5 0.000000e+00 2213/2274 (97%)
EPI295899 A/chicken/Shandong/ZB/2007 (A/H9N2) segment 2 (PB1) 3862.5 0.000000e+00 2211/2271 (97%)
EPI459862 A/muscovy duck/Vietnam/LBM330/2013 (A/H5N1) segment 2 (PB1) 3856.9 0.000000e+00 2212/2274 (97%)
EPI416626 A/chicken/Shandong/BD/2008 (A/H9N2) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%)
EPI221842 A/chicken/Shandong/B3/2007 (A/H9N2) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%)
EPI163675 A/chicken/Zibo/L2/2008 (A/H9N2) segment 2 (PB1) 3845.8 0.000000e+00 2210/2274 (97%)
EPI390516 A/duck/Wuxi/7/2010 (A/H9N2) segment 2 (PB1) 3844.0 0.000000e+00 2169/2213 (98%)
EPI270279 A/chicken/Hebei/7/2008 (A/H9N2) segment 2 (PB1) 3834.8 0.000000e+00 2209/2275 (97%)
EPI270087 A/chicken/Hebei/A/2007 (A/H9N2) segment 2 (PB1) 3834.8 0.000000e+00 2209/2275 (97%)
EPI243529 A/feces/Hunan/2-28/2007 (A/H9N2) segment 2 (PB1) 3834.8 0.000000e+00 2208/2274 (97%)
EPI243481 A/environment/Hunan/1-18/2007 (A/H9N2) segment 2 (PB1) 3834.8 0.000000e+00 2208/2274 (97%)
EPI221992 A/environment/Hunan/1-35/2007 (A/H5N1) segment 2 (PB1) 3834.8 0.000000e+00 2208/2274 (97%)
EPI243505 A/environment/Hunan/1-81/2007 (A/H9N2) segment 2 (PB1) 3829.2 0.000000e+00 2207/2274 (97%)
EPI459255 A/duck/Quanh Ninh/21/2013 (A/H5N1) segment 2 (PB1) 3823.7 0.000000e+00 2206/2274 (97%)
EPI313916 A/chicken/Tibet/S4/2009 (A/H9N2) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%)
EPI313908 A/chicken/Tibet/S1/2009 (A/H9N2) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%)
EPI270280 A/chicken/Hebei/C4/2008 (A/H9N2) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%)
EPI270088 A/chicken/Hebei/Y2/2009 (A/H9N2) segment 2 (PB1) 3823.7 0.000000e+00 2207/2275 (97%)
EPI243513 A/environment/Hunan/2-84/2007 (A/H9N2) segment 2 (PB1) 3823.7 0.000000e+00 2206/2274 (97%)
EPI243489 A/environment/Hunan/1-23/2007 (A/H9N2) segment 2 (PB1) 3823.7 0.000000e+00 2206/2274 (97%)
EPI246034 A/chicken/Hebei/4/2008 (A/H9N2) segment 2 (PB1) 3818.1 0.000000e+00 2206/2275 (96%)
EPI243497 A/environment/Hunan/1-70/2007 (A/H9N2) segment 2 (PB1) 3818.1 0.000000e+00 2205/2274 (96%)
EPI390511 A/chicken/Qianzhou/12/2010 (A/H9N2) segment 2 (PB1) 3816.3 0.000000e+00 2164/2213 (97%)
EPI390507 A/chicken/Tongshan/1/2011 (A/H9N2) segment 2 (PB1) 3816.3 0.000000e+00 2164/2213 (97%)
EPI458984 A/chicken/Jiangsu/1001/2013 (A/H5N2) segment 2 (PB1) 3812.6 0.000000e+00 2204/2274 (96%)
EPI416226 A/chicken/Shanghai/C2/2012 (A/H9N2) segment 2 (PB1) 3812.6 0.000000e+00 2205/2275 (96%)
EPI390506 A/chicken/Yongcheng/1/2011 (A/H9N2) segment 2 (PB1) 3810.8 0.000000e+00 2163/2213 (97%)
EPI272222 A/chicken/Shandong/HY/2009 (A/H9N2) segment 2 (PB1) 3810.8 0.000000e+00 2191/2259 (96%)
EPI295905 A/chicken/Jiangxi/12/2007 (A/H9N2) segment 2 (PB1) 3807.1 0.000000e+00 2201/2271 (96%)
EPI295902 A/chicken/Shandong/22/2008 (A/H9N2) segment 2 (PB1) 3807.1 0.000000e+00 2201/2271 (96%)
EPI270077 A/chicken/Henan/1.2/2008 (A/H9N2) segment 2 (PB1) 3807.1 0.000000e+00 2204/2275 (96%)
EPI390509 A/chicken/Jiawang/2/2011 (A/H9N2) segment 2 (PB1) 3805.2 0.000000e+00 2162/2213 (97%)
EPI416692 A/chicken/Shandong/01/2009 (A/H9N2) segment 2 (PB1) 3801.5 0.000000e+00 2202/2274 (96%)
EPI332572 A/duck/Shandong/009/2008 (A/H5N1) segment 2 (PB1) 3796.0 0.000000e+00 2201/2274 (96%)
EPI314010 A/duck/Tibet/S2/2009 (A/H9N2) segment 2 (PB1) 3796.0 0.000000e+00 2202/2275 (96%)
EPI416586 A/chicken/Shandong/02/2008 (A/H9N2) segment 2 (PB1) 3790.4 0.000000e+00 2200/2274 (96%)
EPI395834 A/chicken/Tibet/LZ01/2010 (A/H5N2) segment 2 (PB1) 3790.4 0.000000e+00 2201/2275 (96%)
EPI295901 A/chicken/Shandong/1231/2008 (A/H9N2) segment 2 (PB1) 3784.9 0.000000e+00 2199/2273 (96%)
EPI243537 A/feces/Hunan/3-91/2007 (A/H9N2) segment 2 (PB1) 3784.9 0.000000e+00 2199/2274 (96%)
EPI222032 A/environment/Hunan/5-32/2007 (A/H5N1) segment 2 (PB1) 3784.9 0.000000e+00 2199/2274 (96%)
EPI390505 A/chicken/Shuanggou/1/2011 (A/H9N2) segment 2 (PB1) 3783.1 0.000000e+00 2158/2213 (97%)
EPI443665 A/Chicken/Hangzhou/50/2013 (A/H7N9) segment 2 (PB1) 3779.4 0.000000e+00 2198/2274 (96%)
EPI416578 A/chicken/Shandong/01/2010 (A/H9N2) segment 2 (PB1) 3779.4 0.000000e+00 2198/2274 (96%)
EPI390508 A/chicken/Xigou/1/2011 (A/H9N2) segment 2 (PB1) 3777.5 0.000000e+00 2157/2213 (97%)
EPI243521 A/environment/Hunan/5-38/2007 (A/H9N2) segment 2 (PB1) 3773.8 0.000000e+00 2197/2274 (96%)
EPI168062 A/peregrine falcon/Hong Kong/2142/2008 (A/H5N1) segment 2 (PB1) 3773.8 0.000000e+00 2198/2275 (96%)
EPI390532 A/quail/Wuxi/7/2010 (A/H9N2) segment 2 (PB1) 3772.0 0.000000e+00 2156/2213 (97%)

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