Rhiza Labs FluTracker Forum

G2101A (D701N)
EPI361697 A/swine/Italy/259543/2003 (A/H1N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI332926 A/equine/New Market/1/1979 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI332921 A/equine/New Market/nasalwash1/1979 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI314454 A/equine/Tottori/1/07 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI306426 A/swine/Sweden/9706/2010 (A/H1N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI289619 A/canine/NY/dog3c15/2009 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI289618 A/canine/NY/dog4c06/2009 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI289617 A/canine/NY/dog4c13/2009 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI289616 A/canine/NY/dog4c07/2009 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281640 A/canine/New York/158402-1/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281632 A/canine/New York/145353/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281624 A/canine/Pennsylvania/137154/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281616 A/canine/New York/51854/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281608 A/canine/Colorado/6723-8/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281600 A/equine/New York/146066/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281592 A/equine/Virginia/131054-3/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281584 A/canine/Colorado/6723-8/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281576 A/canine/Pennsylvania/94930-3/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281568 A/canine/New York/115719/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281560 A/canine/Florida/61156-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281552 A/canine/Florida/61156-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281544 A/equine/Montana/9233/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281536 A/canine/Pennsylvania/10915/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281528 A/canine/Pennsylvania/10909/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281520 A/canine/Pennsylvania/16699/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281512 A/canine/Kentucky/118778/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281504 A/canine/New York/147926-5/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281496 A/canine/New York/147926-3/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281488 A/canine/New York/100528-6/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281480 A/canine/New York/100528-5/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281472 A/canine/New York/100528-1/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281464 A/canine/New York/100525-1/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281456 A/canine/Florida/89911-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281448 A/canine/Florida/78592-7/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281440 A/canine/Florida/78592-6/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281432 A/canine/Florida/78592-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281424 A/canine/California/70645-4/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281416 A/canine/Colorado/30604/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281408 A/canine/Colorado/17864/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281400 A/canine/Colorado/17864/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281392 A/canine/Colorado/8880/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281384 A/canine/New York/4986-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281376 A/canine/New York/5183-6/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281368 A/canine/New York/5183-6/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281360 A/equine/Ohio/113461-3/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281352 A/equine/Ohio/113461-1/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281344 A/equine/Ohio/113461-2/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281336 A/equine/Texas/117793/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281328 A/equine/Ohio/113461-2/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281320 A/equine/Texas/117793/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281312 A/canine/New York/115809/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI273622 A/Wisconsin/51/2009 (A/H1N1 pdm09) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI243544 A/equine/Huabei/1/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242936 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242935 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242934 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242933 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242932 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242931 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242929 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242926 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242923 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242777 A/SC35M (A/H7N7) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242350 A/equine/Kascakew/1/1978 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI241737 A/Hong Kong/33982/2009 (A/H9N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI240124 A/equine/Kentucky/211/1987 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI240117 A/equine/Kentucky/1/1981 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI239740 A/equine/Newmarket/2/1993 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI239734 A/equine/Newmarket/1/1993 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI235162 A/equine/Newmarket/5/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI226913 A/canine/Miami/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI226907 A/canine/Jacksonville/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI188111 A/swine/Illinois/Sg-00443/2008 (A/H1N1) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186931 A/equine/Xinjiang/5/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186923 A/equine/Xinjiang/4/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186915 A/equine/Xinjiang/3/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186907 A/equine/Xinjiang/2/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186899 A/equine/Xinjiang/1/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186891 A/equine/Qinghai/1/1994 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186883 A/equine/Inner Mongolia/8/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186875 A/equine/Liaoning/9/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186867 A/equine/Heilongjiang/10/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186859 A/equine/Hubei/6/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186851 A/equine/Gansu/7/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI179452 A/swine/Chibi/01/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI179444 A/swine/Anhui/01/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI171275 A/equine/Argentina/1/1977 (A/H7N7) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI171267 A/equine/Uruguay/1063/1976 (A/H7N7) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI171259 A/equine/Sao Paulo/4/1976 (A/H7N7) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI171251 A/equine/Kentucky/1a/1975 (A/H7N7) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI165408 A/equine/Sachiyama/1/1971 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI159287 A/equine/France/1/1967 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI159279 A/equine/Switzerland/2225/1979 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI156264 A/equine/Johannesburg/1/1986 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI156248 A/equine/Kentucky/2/1980 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI154467 A/equine/Sussex/93753/89 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI154033 A/equine/Uruguay/1/1963 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI154025 A/equine/Berlin/1/1989 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI154017 A/equine/Fontainbleu/1/1979 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI154009 A/equine/Sao Paulo/1/1969 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI154001 A/equine/Romania/1/1980 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153993 A/equine/Switzerland/1118/1979 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153985 A/equine/Italy/1062/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153977 A/equine/Roma/5/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153969 A/equine/Switzerland/173/1993 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153961 A/equine/Austria/421/1992 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153953 A/equine/Italy/1199/1992 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153945 A/equine/Italy/824/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153937 A/equine/Santa Fe/1/1985 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153929 A/equine/Cordoba/18/1985 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153921 A/equine/Sao Paulo/6/1963 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153857 A/equine/Kentucky/3/1986 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153849 A/equine/Kentucky/2/1986 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI152776 A/equine/Kentucky/2/1987 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI139459 A/equine/Cornell/16/74 (A/H7N7) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI137792 A/equine/California/8560/2002 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI137773 A/equine/California/4537/1997 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI137545 A/equine/Kentucky/Rosie100/1981 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133349 A/equine/New York/1/1983 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133292 A/equine/Kentucky/8/1994 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133273 A/equine/Kentucky/1/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133254 A/equine/Tennessee/5/1986 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133235 A/equine/Alaska/29759/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133216 A/equine/Kentucky/1/1992 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133197 A/equine/Texas/39655/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133178 A/equine/Kentucky/1277/1990 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133159 A/equine/Kentucky/698/1988 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133140 A/equine/Kentucky/694/1988 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133121 A/equine/Kentucky/692/1988 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133102 A/equine/Kentucky/1/1987 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133083 A/equine/Kentucky/1/1986 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133064 A/equine/California/83/1982 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133045 A/equine/Kentucky/3/1981 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI130339 A/equine/Kentucky/2/1986 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI130327 A/equine/London/1416/1973 (A/H7N7) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI115398 A/Puerto Rico/8/34 (A/H1N1 seasonal) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98537 A/equine/California/191/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98535 A/equine/Massachussetts/213/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98533 A/equine/New York/452/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98531 A/equine/New York/1/1999 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98529 A/equine/Kentucky/5/2002 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98527 A/equine/Ohio/1/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98477 A/canine/Florida/242/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98461 A/canine/Florida/43/2004 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI78012 A/equine/New York/VR-297/1983 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77993 A/equine/California/103/1982 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77974 A/equine/Kentucky/magnificent_genius1/1981 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77955 A/equine/Georgia/13/1981 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77936 A/equine/Georgia/10/1981 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77917 A/equine/Georgia/9/1981 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77898 A/equine/Georgia/3/1981 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77879 A/equine/Georgia/1/1981 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77860 A/equine/Kentucky/bitter_boredom5/1976 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77841 A/equine/Kentucky/pass_the_pepper1/1976 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77822 A/equine/Miami/1/1963 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77784 A/equine/Kentucky/2/1981 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77765 A/equine/California/1/1980 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77746 A/equine/Kentucky/4/1980 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI77727 A/equine/Kentucky/1/1978 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI52084 A/equine/Idaho/37875/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI25736 A/equine/Kentucky/5/02 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)

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C768T/C774T/G777A combination

EPI363896 A/duck/Guangxi/1533/2007 (A/H6N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI363492 A/duck/Guangxi/3333/2006 (A/H6N1) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI363484 A/duck/Guangxi/2736/2006 (A/H6N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI363476 A/duck/Guangxi/2140/2006 (A/H6N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI363468 A/duck/Guangxi/1248/2006 (A/H6N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI363460 A/duck/Guangxi/1157/2006 (A/H6N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI347192 A/equine/Athens/04/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI347191 A/equine/Athens/02/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI345258 A/shorebird/Delaware Bay/275/1994 (A/H0) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI325491 A/Taiwan/6723/2008 (A/H1N1) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI314454 A/equine/Tottori/1/07 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI296615 A/mallard/Sweden/90/2005 (A/H11N9) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI296543 A/mallard/Netherlands/20/2005 (A/H12N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI292710 A/duck/Thailand/CU5408/2009 (A/H11N3) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI292702 A/duck/Thailand/CU5388/2009 (A/H11N3) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI289221 A/canine/NY/dog23/2009 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI289220 A/canine/NY/dog4/2009 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281640 A/canine/New York/158402-1/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281632 A/canine/New York/145353/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281624 A/canine/Pennsylvania/137154/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281616 A/canine/New York/51854/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281608 A/canine/Colorado/6723-8/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281600 A/equine/New York/146066/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281592 A/equine/Virginia/131054-3/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281584 A/canine/Colorado/6723-8/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281576 A/canine/Pennsylvania/94930-3/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281568 A/canine/New York/115719/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281560 A/canine/Florida/61156-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281552 A/canine/Florida/61156-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281544 A/equine/Montana/9233/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281536 A/canine/Pennsylvania/10915/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281528 A/canine/Pennsylvania/10909/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281520 A/canine/Pennsylvania/16699/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281512 A/canine/Kentucky/118778/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281504 A/canine/New York/147926-5/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281496 A/canine/New York/147926-3/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281488 A/canine/New York/100528-6/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281480 A/canine/New York/100528-5/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281472 A/canine/New York/100528-1/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281464 A/canine/New York/100525-1/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281456 A/canine/Florida/89911-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281448 A/canine/Florida/78592-7/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281440 A/canine/Florida/78592-6/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281432 A/canine/Florida/78592-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281416 A/canine/Colorado/30604/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281408 A/canine/Colorado/17864/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281400 A/canine/Colorado/17864/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281392 A/canine/Colorado/8880/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281384 A/canine/New York/4986-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281376 A/canine/New York/5183-6/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281368 A/canine/New York/5183-6/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281360 A/equine/Ohio/113461-3/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281352 A/equine/Ohio/113461-1/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281344 A/equine/Ohio/113461-2/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281336 A/equine/Texas/117793/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281328 A/equine/Ohio/113461-2/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281320 A/equine/Texas/117793/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281312 A/canine/New York/115809/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI272774 A/duck/Denmark/53-147-8/2008 (A/H7N1) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI262712 A/aquatic bird/Korea/w347/2008 (A/H5N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI243544 A/equine/Huabei/1/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242978 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242970 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242955 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242936 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242935 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242934 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242933 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242907 A/equine (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI241782 A/equine/Yokohama/aq19/2009 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI240687 A/equine/La Plata/1993 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI240679 A/equine/Hokkaido/I828/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI240130 A/equine/Sussex/1/1989 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI240124 A/equine/Kentucky/211/1987 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI239740 A/equine/Newmarket/2/1993 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI239734 A/equine/Newmarket/1/1993 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI238715 A/equine/Avesta/1993 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI238589 A/mallard/Minnesota/354/1999 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI235162 A/equine/Newmarket/5/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI226913 A/canine/Miami/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI226907 A/canine/Jacksonville/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI221853 A/chicken/Zhejiang/HJ/2007 (A/H9N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI190347 A/mallard/Netherlands/1/2006 (A/H8N4) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186931 A/equine/Xinjiang/5/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186923 A/equine/Xinjiang/4/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186915 A/equine/Xinjiang/3/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186907 A/equine/Xinjiang/2/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186899 A/equine/Xinjiang/1/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186891 A/equine/Qinghai/1/1994 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186883 A/equine/Inner Mongolia/8/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186875 A/equine/Liaoning/9/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186867 A/equine/Heilongjiang/10/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186859 A/equine/Hubei/6/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186851 A/equine/Gansu/7/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI179452 A/swine/Chibi/01/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI179444 A/swine/Anhui/01/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI169334 A/Anas platyrhynchos/Belgium/12827/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI158623 A/mallard/MN/99/2000 (A/H3N6) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI156264 A/equine/Johannesburg/1/1986 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI154467 A/equine/Sussex/93753/89 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI154459 A/equine/Sussex/1/1989 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI154025 A/equine/Berlin/1/1989 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153985 A/equine/Italy/1062/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153977 A/equine/Roma/5/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153969 A/equine/Switzerland/173/1993 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153961 A/equine/Austria/421/1992 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153953 A/equine/Italy/1199/1992 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153945 A/equine/Italy/824/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153937 A/equine/Santa Fe/1/1985 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153929 A/equine/Cordoba/18/1985 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153857 A/equine/Kentucky/3/1986 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153849 A/equine/Kentucky/2/1986 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI153110 A/equine/Mongolia/1/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI152776 A/equine/Kentucky/2/1987 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI140298 A/duck/Malaysia/F59/2004 (A/H5N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI137792 A/equine/California/8560/2002 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI137773 A/equine/California/4537/1997 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133292 A/equine/Kentucky/8/1994 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133273 A/equine/Kentucky/1/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133254 A/equine/Tennessee/5/1986 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133235 A/equine/Alaska/29759/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133216 A/equine/Kentucky/1/1992 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133197 A/equine/Texas/39655/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133178 A/equine/Kentucky/1277/1990 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133159 A/equine/Kentucky/698/1988 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133140 A/equine/Kentucky/694/1988 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133121 A/equine/Kentucky/692/1988 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133102 A/equine/Kentucky/1/1987 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI133083 A/equine/Kentucky/1/1986 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI130339 A/equine/Kentucky/2/1986 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI99392 A/equine/Wisconsin/1/03 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98537 A/equine/California/191/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98535 A/equine/Massachussetts/213/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98533 A/equine/New York/452/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98531 A/equine/New York/1/1999 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98529 A/equine/Kentucky/5/2002 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98527 A/equine/Ohio/1/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98477 A/canine/Florida/242/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98461 A/canine/Florida/43/2004 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI88039 A/pintail duck/ALB/169/1980 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI85805 A/mallard duck/ALB/676/1979 (A/H3N6) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI71780 A/swine/Wisconsin/1/1957 (A/H1N1) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI52084 A/equine/Idaho/37875/1991 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI25736 A/equine/Kentucky/5/02 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI3520 A/equine/Kanazawa/1/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI1173 A/duck/Yokohama/aq10/2003 (A/H5N1) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)

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LOCUS JQ433876 2279 bp cRNA linear VRL 31-JUL-2012
DEFINITION Influenza A virus (A/harbor seal/Massachusetts/1/2011(H3N8))
segment 1 polymerase PB2 (PB2) gene, partial cds.
ACCESSION JQ433876
VERSION JQ433876.1 GI:395618056
KEYWORDS .
SOURCE Influenza A virus (A/harbor seal/Massachusetts/1/2011(H3N8))
ORGANISM Influenza A virus (A/harbor seal/Massachusetts/1/2011(H3N8))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 2279)
AUTHORS Anthony,S.J., St. Leger,J.A., Pugliares,K., Ip,H.S., Chan,J.M.,
Carpenter,Z.W., Navarrete-Macias,I., Sanchez-Leon,M., Saliki,J.T.,
Pedersen,J., Karesh,W., Daszak,P., Rabadan,R., Rowles,T. and
Lipkin,W.I.
TITLE Emergence of Fatal Avian Influenza in New England Harbor Seals
JOURNAL MBio 3 (4), E00166-12 (2012)
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 2279)
AUTHORS Anthony,S.J.
TITLE Direct Submission
JOURNAL Submitted (20-JAN-2012) Center for Infection and Immunity, Columbia
University, 722 West 168th Street, New York, NY 10032, USA
COMMENT GenBank Accession Numbers JQ433876-JQ433883 represent sequences
from the 8 segments of Influenza A virus (A/harbor
seal/Massachusetts/1/2011(H3N8)).
FEATURES Location/Qualifiers
source 1..2279
/organism="Influenza A virus (A/harbor
seal/Massachusetts/1/2011(H3N8))"
/mol_type="viral cRNA"
/strain="A/harbor seal/Massachusetts/1/2011"
/serotype="H3N8"
/host="Phoca vitulina"
/db_xref="taxon:1136533"
/segment="1"
/country="USA"
/collection_date="Sep-2011"
/collected_by="K.Pugliares"
gene 1..>2279
/gene="PB2"
CDS 1..>2279
/gene="PB2"
/codon_start=1
/product="polymerase PB2"
/protein_id="AFA51731.1"
/db_xref="GI:395618057"
/translation="MERIKELRDLMSQSRTREILTKTTVDHMAIIKKYTSGRQEKNPA
LRMKWMMAMKYPITANKRIMEMIPERNEQGQTLWSKTNDAGSDRVMVSPLAVTWWNRN
GPTTSTVHYPKVYKTYFEKVERLKHGTFGPVHFRNQVKIRRRVDMNPGHADLSAKEAQ
DVIMEVVFPNEVGARILTSESQLTITKEKKEELQDCKIAPLMVAYMLERELVRKTRFL
PVAGGTSSVYIEVLHLTQGTCWEQMYTPGGEVRNDDVDQSLIIAARNIVRRATVSADP
LASLLEMCHSTQIGGIRMVDILRQNPTEEQAVDICKAAMGLRISSSFSFGGFTFKRTS
GSSVKREEEVLTGNLQTLKIRVHEGYEEFTMVGRRATAILRRATRRLVQLIVSGRDEQ
SIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWG
IEPIDNVMGMIGILPDMTPSTEMSLRGIRVSKMGVDEYSSTERVVVSIDRFLRVRDQR
GNVLLSPEEVSETQGTEKLTITYSSSMMWEINGPESVLVNTYQWIIRNWETVKIQWSQ
DPTMLYNKMEFEPFQSLVPKAARGQYSGFVRTLFQQMRDVLGTFDTVQIIKLLPFAAA
PPEQSRMQFSSLTVNVRGSGMRILVRGNSPVFNYNKATKRLTVLGKDAGALTEDPDEG
TAGVESAVLRGFLILGKENKRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRD
SSILTDSQTATKRIRMAIN"
ORIGIN
1 atggagagaa taaaagaact gagagatcta atgtcacagt ctcgcactcg cgagatactc
61 accaaaacca ctgtggacca catggccata ataaagaagt acacatcagg aaggcaagag
121 aagaaccctg cacttaggat gaagtggatg atggcaatga aatatccaat tacagcaaac
181 aagagaataa tggaaatgat tcctgaaagg aatgaacagg gacaaaccct ttggagcaaa
241 acaaatgatg ctggctcaga ccgagtgatg gtatcacctc tggccgtgac atggtggaat
301 aggaatggac caacaactag tacagttcat tatccgaagg tatataaaac ttatttcgaa
361 aaagtcgaaa ggttgaaaca cgggaccttt ggccctgtcc acttcagaaa tcaagttaaa
421 ataagacgga gggttgacat gaaccctggc cacgcagacc tcagtgccaa agaggcacag
481 gatgtaatca tggaagtcgt tttcccaaat gaagtggggg cgaggatact aacctcggag
541 tcacaactga cgataacaaa agaaaagaag gaagaactcc aggactgcaa gattgcccct
601 ttgatggttg catatatgct ggaaagagag ttggtccgta aaacgaggtt cctcccagtg
661 gctggtggga cgagcagtgt ctacattgag gtgctgcatt tgactcaggg gacatgctgg
721 gagcaaatgt acaccccagg aggggaagtg aggaatgatg atgttgatca aagtttaatt
781 atcgctgcca ggaacatagt aagaagagca acagtatcag cagacccact agcatctcta
841 ttggaaatgt gccacagcac acagatcgga gggataagga tggtagacat tcttcggcag
901 aatccaacag aggaacaagc agtggacata tgcaaagcag caatgggctt aaggattagc
961 tcatccttca gctttggcgg atttactttc aaaagaacaa gcgggtcgtc agttaagaga
1021 gaagaagaag tgcttacggg caaccttcaa acattgaaaa taagagtaca tgaagggtat
1081 gaggagttca caatggttgg aagaagagca acagccatcc tcaggagggc aaccagaaga
1141 ttggtccaac taattgtaag tgggagagac gagcagtcaa ttgctgaagc aataattgtg
1201 gccatggtat tttcacaaga ggattgtatg atcaaagcag ttcgaggtga tctgaacttt
1261 gtcaataggg caaatcagcg attaaaccca atgcatcaac tcttgagaca cttccaaaag
1321 gatgccaaag tgcttttcca gaactgggga attgaaccca ttgacaatgt aatgggaatg
1381 atcgggatat tgcccgacat gaccccaagt actgaaatgt cgctgagggg gataagagtc
1441 agtaagatgg gagttgacga atactccagc acagagagag tagtagtgag cattgaccga
1501 tttttaagag tccgggacca acggggaaat gtgttattgt cgcctgaaga ggtcagcgag
1561 acacaaggga cagagaagct gacaataact tattcgtcat caatgatgtg ggagataaat
1621 ggtcctgaat cggttttggt caatacttac cagtggatca tcagaaactg ggaaactgtg
1681 aaaattcaat ggtcacagga ccccacgatg ttatataaca agatggaatt cgagccattt
1741 cagtccctgg tccctaaggc agccagaggt cagtacagtg gatttgtgag gacactgttc
1801 cagcaaatgc gggatgtgct tggaacattc gacactgttc agataataaa acttctaccc
1861 tttgctgctg ctccaccaga acaaagtagg atgcagttct cctccttgac tgtgaatgtg
1921 aggggatcag gaatgagaat actagtaagg ggcaattctc cagtgttcaa ctacaataag
1981 gccactaaga ggcttacagt tctcggaaaa gatgcaggtg cattgaccga agatccagat
2041 gaaggcacgg ctggagtaga gtctgctgtt ttgagaggat tcctcatctt gggcaaagaa
2101 aacaagagat atggcccagc attgagcatc aatgaactga gcaaccttgc aaaaggagag
2161 aaggctaatg tgctaatcgg gcaaggagac gtagtgttgg taatgaaacg gaaacgggac
2221 tctagcatac ttactgacag ccagacagcg accaaaagaa ttcggatggc catcaatag

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Commentary

http://www.recombinomics.com/News/07311 ... ation.html

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C135T

EPI370891 A/mallard/New York/66861/1978 (A/H2N3) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI370882 A/black duck/New Jersey/1580/1978 (A/H2N3) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI370021 A/mallard/New York/6750/1978 (A/H2N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI343037 A/blue-winged teal/Alberta/387/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI314454 A/equine/Tottori/1/07 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI314181 A/turkey/Ontario/6213/1966 (A/H0) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI314168 A/turkey/Massachusetts/3740/1965 (A/H6N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI289221 A/canine/NY/dog23/2009 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI289220 A/canine/NY/dog4/2009 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281640 A/canine/New York/158402-1/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281632 A/canine/New York/145353/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281624 A/canine/Pennsylvania/137154/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281616 A/canine/New York/51854/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281608 A/canine/Colorado/6723-8/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281600 A/equine/New York/146066/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281592 A/equine/Virginia/131054-3/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281584 A/canine/Colorado/6723-8/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281576 A/canine/Pennsylvania/94930-3/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281568 A/canine/New York/115719/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281560 A/canine/Florida/61156-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281552 A/canine/Florida/61156-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281544 A/equine/Montana/9233/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281504 A/canine/New York/147926-5/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281496 A/canine/New York/147926-3/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281488 A/canine/New York/100528-6/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281480 A/canine/New York/100528-5/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281472 A/canine/New York/100528-1/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281464 A/canine/New York/100525-1/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281456 A/canine/Florida/89911-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281424 A/canine/California/70645-4/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281416 A/canine/Colorado/30604/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281408 A/canine/Colorado/17864/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281400 A/canine/Colorado/17864/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281392 A/canine/Colorado/8880/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281384 A/canine/New York/4986-2/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281376 A/canine/New York/5183-6/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281368 A/canine/New York/5183-6/2006 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281360 A/equine/Ohio/113461-3/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281352 A/equine/Ohio/113461-1/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281344 A/equine/Ohio/113461-2/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281336 A/equine/Texas/117793/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281328 A/equine/Ohio/113461-2/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281320 A/equine/Texas/117793/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI281312 A/canine/New York/115809/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI280693 A/mallard/Kentucky/472048-2/2006 (A/H5N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI243544 A/equine/Huabei/1/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242720 A/turkey/Ontario/7732/1966 (A/H5N9) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI242658 A/turkey/Canada/1963 (A/H6N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI239767 A/chicken/Victoria/9306-04-0930/1992 (A/H7N3) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI239740 A/equine/Newmarket/2/1993 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI239363 A/chicken/Pakistan/447/1995 (A/H7N3) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI239355 A/chicken/Pakistan/1369-CR2/1995 (A/H7N3) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI235730 A/chicken/Chile/184240-5/2002 (A/H7N3) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI235162 A/equine/Newmarket/5/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI228514 A/whiskered tern/Egypt/04/2004 (A/H6N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI226913 A/canine/Miami/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI226907 A/canine/Jacksonville/2005 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186931 A/equine/Xinjiang/5/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186923 A/equine/Xinjiang/4/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186915 A/equine/Xinjiang/3/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186907 A/equine/Xinjiang/2/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186899 A/equine/Xinjiang/1/2007 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186883 A/equine/Inner Mongolia/8/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186875 A/equine/Liaoning/9/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186867 A/equine/Heilongjiang/10/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186859 A/equine/Hubei/6/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI186851 A/equine/Gansu/7/2008 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI184476 A/green-winged teal/Minnesota/Sg-00131/2007 (A/H3N2) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI159219 A/duck/LA/17G/1987 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI158379 A/duck/PA/486/1969 (A/H6N1) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI137792 A/equine/California/8560/2002 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI137773 A/equine/California/4537/1997 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI99392 A/equine/Wisconsin/1/03 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98537 A/equine/California/191/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98535 A/equine/Massachussetts/213/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98533 A/equine/New York/452/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98529 A/equine/Kentucky/5/2002 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98527 A/equine/Ohio/1/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98477 A/canine/Florida/242/2003 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI98461 A/canine/Florida/43/2004 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI43285 A/turkey/Ontario/7732/1966 (A/H5N9) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)
EPI25736 A/equine/Kentucky/5/02 (A/H3N8) segment 1 (PB2) 27.0 8.439672e+00 14/14 (100%)

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