Rhiza Labs FluTracker Forum

Animal Health and Veterinary Laboratories Agency has released (at GISAID) H1N1pdm09 sequences from turkeys in England.

_________________
www.twitter.com/hniman

Isolate name:

A/turkey/England/1651/2011

Isolate ID:

EPI_ISL_121539
Passage details/history:

clinical specimen
Type:

A / H1N1
Lineage:
pdm09


Sample information

Collection date:

2011-01-11
Host

Turkey
Additional host information:

turkey breeder flock
Domestic status:


Is vaccinated:


Location:

United Kingdom / Cheshire
Additional location information:


Health status:


Specimen source:


Strain or commercial product name used for vaccination:




Institute information

Originating lab:
AHVLA
Sample ID given by the sample provider:

AV-11-001651
Address:
AHVLA
New Haw
Surrey,
United Kingdom


Submitting lab:
AHVLA
Sample ID given by the submitting laboratory:

AV-11-001651
Authors:
Reid, S.M;
Cox, W.J;
Ceeraz, V;
Sutton, D;
Essen, S.C;
Howard, W.A;
Slomka, M.J;
Irvine, R.M;
Brown, I.H
Address:
AHVLA
New Haw
Surrey,
United Kingdom


Publication
Publication


In vivo antiviral resistance

Unspecified Genotype Phenotype
Antiviral resistance tested by unknown method
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown


Antiviral resistance tested by sequence prediction
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown

Antiviral resistance tested by experimental procedures
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown

Additional information
Antigenic characterization:


Note:
Clinical symptoms - large egg drop

Sequence

segment identifier length accession # INSDC Sequence
HA A/turkey/England/1651/11(HA) 1186 EPI376531
NA A/turkey/England/1651/11(NA) 366 EPI376530

Submitter information

_________________
www.twitter.com/hniman

Isolate name:

A/turkey/England/1615/2011

Isolate ID:

EPI_ISL_121538
Passage details/history:

clinical specimen
Type:

A / H1N1
Lineage:
pdm09


Sample information

Collection date:

2011-01-11
Host

Turkey
Additional host information:

turkey breeder flock
Domestic status:


Is vaccinated:


Location:

United Kingdom / Cheshire
Additional location information:


Health status:


Specimen source:

Cloacal swab
Strain or commercial product name used for vaccination:




Institute information

Originating lab:
AHVLA
Sample ID given by the sample provider:

AV-11-001615
Address:
AHVLA
New Haw
Surrey,
United Kingdom


Submitting lab:
AHVLA
Sample ID given by the submitting laboratory:

AV-11-001615
Authors:
Reid, S.M;
Cox, W.J;
Ceeraz, V;
Sutton, D;
Essen, S.C;
Howard, W.A;
Slomka, M.J;
Irvine, R.M;
Brown, I.H
Address:
AHVLA
New Haw
Surrey,
United Kingdom


Publication
Publication


In vivo antiviral resistance

Unspecified Genotype Phenotype
Antiviral resistance tested by unknown method
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown


Antiviral resistance tested by sequence prediction
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown

Antiviral resistance tested by experimental procedures
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown

Additional information
Antigenic characterization:


Note:
Clinical symptoms - large egg drop

Sequence

segment identifier length accession # INSDC Sequence
HA A/turkey/England/1615/11(HA) 1616 EPI376529
NA A/turkey/England/1615/11(NA) 699 EPI376528

Submitter information

_________________
www.twitter.com/hniman

Topp 100 H1 matches at GISAID

EPI376531 A/turkey/England/1651/2011 (A/H1N1 pdm09) segment 4 (HA) 2191.2 0.000000e+00 1186/1186 (100%)
EPI335558 A/Bangkok/INS490/2010 (A/H1N1) segment 4 (HA) 2169.1 0.000000e+00 1182/1186 (99%)
EPI332197 A/Bangkok/INS500/2010 (A/H1N1) segment 4 (HA) 2169.1 0.000000e+00 1182/1186 (99%)
EPI332812 A/India/NIV30905/2010 (A/H1N1) segment 4 (HA) 2163.5 0.000000e+00 1181/1186 (99%)
EPI332221 A/Bangkok/INS497/2010 (A/H1N1) segment 4 (HA) 2163.5 0.000000e+00 1181/1186 (99%)
EPI332181 A/Bangkok/INS503/2010 (A/H1N1) segment 4 (HA) 2163.5 0.000000e+00 1181/1186 (99%)
EPI304462 A/Norway/319/2011 (A/H1N1 pdm09) segment 4 (HA) 2163.5 0.000000e+00 1181/1186 (99%)
EPI295740 A/England/119/2010 (A/H1N1 pdm09) segment 4 (HA) 2163.5 0.000000e+00 1181/1186 (99%)
EPI295732 A/England/4500186/2010 (A/H1N1 pdm09) segment 4 (HA) 2163.5 0.000000e+00 1181/1186 (99%)
EPI244041 A/KYOTO/2/2010 (A/H1N1 pdm09) segment 4 (HA) 2163.5 0.000000e+00 1181/1186 (99%)
EPI376529 A/turkey/England/1615/2011 (A/H1N1 pdm09) segment 4 (HA) 2159.9 0.000000e+00 1173/1175 (99%)
EPI374143 A/Malaysia/2156796/2009 (A/H1N1) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI369828 A/England/287/2010 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI369825 A/England/193/2010 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI349533 A/Taiwan/1018/2011 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI349425 A/England/434/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI336477 A/England/1006/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI336467 A/England/713/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI334748 A/Aichi/328/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI334747 A/Aichi/323/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI334745 A/Aichi/302/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI334744 A/Aichi/301/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI334742 A/Aichi/293/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI334653 A/Aichi/290/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI334647 A/Aichi/307/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI334645 A/Aichi/277/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI332742 A/Lur/NIV24770/2010 (A/H1N1) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI332582 A/Taiwan/967/2011 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI332261 A/Bangkok/INS491/2010 (A/H1N1) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI332245 A/Bangkok/INS493/2010 (A/H1N1) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI332237 A/Bangkok/INS494/2010 (A/H1N1) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI332157 A/Bangkok/INS506/2010 (A/H1N1) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI331680 A/SINGAPORE/589/2010 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI324462 A/South Carolina/NHRC0001/2011 (A/H3N2) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI316352 A/Georgia/02/2011 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI309911 A/Iowa/01/2011 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI309886 A/Florida/08/2011 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI308927 A/North Carolina/AF21797/2011 (A/H1N1) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI298420 A/Bandar Abbas/5096/2010 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI297253 A/Kobe/91524/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI295750 A/England/5500192/2010 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI295727 A/England/87/2010 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI281781 A/Texas/AF2631/2010 (A/H1N1) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI281780 A/Texas/AF2630/2010 (A/H1N1) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI280286 A/Florida/13/2010 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI278257 A/Mississippi/AF2467/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI278256 A/Mississippi/AF2466/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI276305 A/ENG/713/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI276295 A/ENG/1006/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI273897 A/India/3725/2010 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI272392 A/CHIBA-C/22/2010 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI271451 A/Pensacola/INS212/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI258950 A/Wisconsin/629-D02082/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI253286 A/Hunan/SWL5/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI253182 A/Shanghai/SWL6/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI240572 A/ENG/434/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI218770 A/Wisconsin/629-D01147/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI216612 A/Shanghai/SWL2/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI214482 A/Wisconsin/629-D01445/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI212349 A/Italy/128/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI210452 A/Qatar/89/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI210392 A/Ukraine/259/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI194194 A/Michigan/06/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI186849 A/Shanghai/60T/2009 (A/H1N1 pdm09) segment 4 (HA) 2158.0 0.000000e+00 1180/1186 (99%)
EPI227841 A/Texas/67/2009 (A/H1N1 pdm09) segment 4 (HA) 2156.2 0.000000e+00 1179/1186 (99%)
EPI177391 A/New York/12/2009 (A/H1N1 pdm09) segment 4 (HA) 2154.3 0.000000e+00 1179/1186 (99%)
EPI375963 A/Hong Kong/H090-770-V22/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI375939 A/Hong Kong/H090-761-V10/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI375875 A/Hong Kong/H090-751-V20/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI375747 A/Hong Kong/H090-693-V10/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI375640 A/Hong Kong/H090-693-V20/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI374191 A/Malaysia/2072040/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI374175 A/Malaysia/2097960/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI374087 A/Malaysia/2098001/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI374079 A/Malaysia/2089888/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI374071 A/Malaysia/2089841/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI374063 A/Malaysia/2086505/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI374039 A/Malaysia/2076039/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI374031 A/Malaysia/2076204/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI374015 A/Malaysia/2050837/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI362197 A/Hong Kong/H090-770-V22/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI362173 A/Hong Kong/H090-761-V10/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI361933 A/Hong Kong/H090-693-V20/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI361924 A/Hong Kong/H090-693-V10/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI360091 A/Tianjinjinnan/SWL164/2009 (A/H1N1 pdm09) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI357064 A/Argentina/14332/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI357048 A/Argentina/12295/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI355946 A/Argentina/7980/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI355902 A/Argentina/8551/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI355897 A/Argentina/8019/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI355892 A/Argentina/9333/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI355888 A/Argentina/9180/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI355884 A/Argentina/9004/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI355866 A/Argentina/9576/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI355862 A/Argentina/9452/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI355856 A/Argentina/9711/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI355848 A/Argentina/9597/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI355844 A/Argentina/9588/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI355841 A/Argentina/9721/2009(H1N1) (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)
EPI354698 A/Jakarta/007/2009 (A/H1N1) segment 4 (HA) 2152.5 0.000000e+00 1179/1186 (99%)

_________________
www.twitter.com/hniman

Top 100 H1 matches

EPI376529 A/turkey/England/1615/2011 (A/H1N1 pdm09) segment 4 (HA) 2985.3 0.000000e+00 1616/1616 (100%)
EPI332197 A/Bangkok/INS500/2010 (A/H1N1) segment 4 (HA) 2952.1 0.000000e+00 1610/1616 (99%)
EPI304462 A/Norway/319/2011 (A/H1N1 pdm09) segment 4 (HA) 2952.1 0.000000e+00 1610/1616 (99%)
EPI295732 A/England/4500186/2010 (A/H1N1 pdm09) segment 4 (HA) 2952.1 0.000000e+00 1610/1616 (99%)
EPI369825 A/England/193/2010 (A/H1N1 pdm09) segment 4 (HA) 2946.5 0.000000e+00 1609/1616 (99%)
EPI335558 A/Bangkok/INS490/2010 (A/H1N1) segment 4 (HA) 2946.5 0.000000e+00 1609/1616 (99%)
EPI332221 A/Bangkok/INS497/2010 (A/H1N1) segment 4 (HA) 2946.5 0.000000e+00 1609/1616 (99%)
EPI332181 A/Bangkok/INS503/2010 (A/H1N1) segment 4 (HA) 2946.5 0.000000e+00 1609/1616 (99%)
EPI295740 A/England/119/2010 (A/H1N1 pdm09) segment 4 (HA) 2946.5 0.000000e+00 1609/1616 (99%)
EPI369828 A/England/287/2010 (A/H1N1 pdm09) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI332812 A/India/NIV30905/2010 (A/H1N1) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI332582 A/Taiwan/967/2011 (A/H1N1 pdm09) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI332261 A/Bangkok/INS491/2010 (A/H1N1) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI332245 A/Bangkok/INS493/2010 (A/H1N1) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI332237 A/Bangkok/INS494/2010 (A/H1N1) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI332157 A/Bangkok/INS506/2010 (A/H1N1) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI324462 A/South Carolina/NHRC0001/2011 (A/H3N2) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI309911 A/Iowa/01/2011 (A/H1N1 pdm09) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI309886 A/Florida/08/2011 (A/H1N1 pdm09) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI295750 A/England/5500192/2010 (A/H1N1 pdm09) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI295727 A/England/87/2010 (A/H1N1 pdm09) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI280286 A/Florida/13/2010 (A/H1N1 pdm09) segment 4 (HA) 2941.0 0.000000e+00 1608/1616 (99%)
EPI346659 A/Malatya/TR-29/2011 (A/H1N1 pdm09) segment 4 (HA) 2937.3 0.000000e+00 1607/1616 (99%)
EPI349533 A/Taiwan/1018/2011 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI349425 A/England/434/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI346673 A/Klaipeda/1067/2011 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI334748 A/Aichi/328/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI334747 A/Aichi/323/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI334745 A/Aichi/302/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI334744 A/Aichi/301/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI334742 A/Aichi/293/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI334653 A/Aichi/290/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI334647 A/Aichi/307/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI334645 A/Aichi/277/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI332742 A/Lur/NIV24770/2010 (A/H1N1) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI316352 A/Georgia/02/2011 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI316335 A/California/17/2011 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI297253 A/Kobe/91524/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI295730 A/England/83/2010 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI253286 A/Hunan/SWL5/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI240572 A/ENG/434/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI218770 A/Wisconsin/629-D01147/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI214482 A/Wisconsin/629-D01445/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI212349 A/Italy/128/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI210452 A/Qatar/89/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI210392 A/Ukraine/259/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI194194 A/Michigan/06/2009 (A/H1N1 pdm09) segment 4 (HA) 2935.4 0.000000e+00 1607/1616 (99%)
EPI336467 A/England/713/2009 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI335498 A/Piaui/69692/2009 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI331680 A/SINGAPORE/589/2010 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1607/1617 (99%)
EPI324414 A/Sydney/DD3-55/2010 (A/H1N1) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI313237 A/Hong Kong/33230/2009 (A/H1N1) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI298420 A/Bandar Abbas/5096/2010 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI292158 A/Finland/569/2009 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI276305 A/ENG/713/2009 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI273897 A/India/3725/2010 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI271451 A/Pensacola/INS212/2009 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI258950 A/Wisconsin/629-D02082/2009 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI244041 A/KYOTO/2/2010 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI227842 A/Texas/67/2009 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI227705 A/Michigan/10/2009 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI227701 A/Michigan/10/2009 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI223193 A/Wisconsin/629-D00739/2009 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI214061 A/Toronto/T0106/2009 (A/H1N1 pdm09) segment 4 (HA) 2929.9 0.000000e+00 1606/1616 (99%)
EPI286652 A/Stockholm/5/2010 (A/H1N1 pdm09) segment 4 (HA) 2926.2 0.000000e+00 1605/1616 (99%)
EPI253278 A/Shaanxi/SWL1/2009 (A/H1N1 pdm09) segment 4 (HA) 2926.2 0.000000e+00 1605/1616 (99%)
EPI177391 A/New York/12/2009 (A/H1N1 pdm09) segment 4 (HA) 2926.2 0.000000e+00 1605/1616 (99%)
EPI375747 A/Hong Kong/H090-693-V10/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI375640 A/Hong Kong/H090-693-V20/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI374191 A/Malaysia/2072040/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI374175 A/Malaysia/2097960/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI374143 A/Malaysia/2156796/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI374087 A/Malaysia/2098001/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI374079 A/Malaysia/2089888/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI374071 A/Malaysia/2089841/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI374063 A/Malaysia/2086505/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI374039 A/Malaysia/2076039/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI374015 A/Malaysia/2050837/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI361933 A/Hong Kong/H090-693-V20/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI361924 A/Hong Kong/H090-693-V10/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI361050 A/Boston/DOA14/2011 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI357064 A/Argentina/14332/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI357048 A/Argentina/12295/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI355946 A/Argentina/7980/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI355927 A/Argentina/8989/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI355897 A/Argentina/8019/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI355892 A/Argentina/9333/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI355888 A/Argentina/9180/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI355884 A/Argentina/9004/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI355866 A/Argentina/9576/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI355856 A/Argentina/9711/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI355848 A/Argentina/9597/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI355844 A/Argentina/9588/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI355841 A/Argentina/9721/2009(H1N1) (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI354533 A/Jakarta/001/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI354286 A/Pernambuco/397/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI354283 A/Pernambuco/181/2009 (A/H1N1) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI350290 A/Helsinki/P15/2009 (A/H1N1 pdm09) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI349036 A/England/419/2009 (A/H1N1 pdm09) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)
EPI349028 A/England/418/2009 (A/H1N1 pdm09) segment 4 (HA) 2924.4 0.000000e+00 1605/1616 (99%)

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