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niman

Post subject: Egypt H5N1 Links to China H5N1 & US H1N1v H1N2v H3N2v

Posted: Fri Jan 13, 2012 9:53 am

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27367
Location: Pittsburgh, PA USA

St Jude has released a set of full sequences (at Genbank) from H5N1 in Egypt. Newly acquired polymorphisms link these sequences to human H5N1 cases in China, including the recent case in Shenzhen, as well as recent human H1N1v and H3N2v cases.

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niman

Post subject: Re: H5N1 Egypt Links to China & H1N1v H3N2v

Posted: Fri Jan 13, 2012 9:58 am

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27367
Location: Pittsburgh, PA USA

LOCUS FR687280 2233 bp cRNA linear VRL 10-JAN-2012
DEFINITION Influenza A virus (A/chicken/Egypt/Q1185/2010(H5N1)) segment 3,
complete segment.
ACCESSION FR687280
VERSION FR687280.1 GI:371805494
KEYWORDS complete viral segment.
SOURCE Influenza A virus (A/chicken/Egypt/Q1185/2010(H5N1))
ORGANISM Influenza A virus (A/chicken/Egypt/Q1185/2010(H5N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1
AUTHORS Kayali,G., Webby,R.J., Govorkova,E.A., Ducatez,M.F., El
Shesheny,R.A., Kandeil,A.M., Mostafa,A. and Ali,M.A.
TITLE The epidemiological and molecular aspects of Influenza H5N1 viruses
at the human-animal interface in Egypt
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 2233)
AUTHORS Ducatez,M.
TITLE Direct Submission
JOURNAL Submitted (24-AUG-2010) to the INSDC. Ducatez M., Infectious
Diseases, St Jude Children's Research Hospital, 262 Danny Thomas
Place, 38105, USA
FEATURES Location/Qualifiers
source 1..2233
/organism="Influenza A virus
(A/chicken/Egypt/Q1185/2010(H5N1))"
/mol_type="viral cRNA"
/strain="A/chicken/Egypt/Q1185/2010"
/serotype="H5N1"
/host="chicken"
/db_xref="taxon:881903"
/segment="3"
/country="Egypt:Qalubiya"
/collection_date="2010"
gene 25..2175
/gene="PA"
CDS 25..2175
/gene="PA"
/codon_start=1
/product="polymerase acidic protein"
/protein_id="CBW54840.1"
/db_xref="GI:371805495"
/translation="MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEV
CFMYSDFHFIDERSESIIVESGDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGVEK
PKFLPDLYDYKENRFIEIGVTRREVHTYYLEKANKIKSEKTHIHIFSFTGEEMATKAD
YTLDEESRARIKTRLFTIRQEMASRGLWDSFRQSERGEETIEEKFEITGTMRRLADQS
LPPNFSSLENFRAYVDGFEPNGCIEGKLSQMSKEVNARIEPFLKTTPRPLKLPDGPPC
SQRSKFLLMDSLKLSIEDPSHEGEGIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNY
LLTWKQVLAELQDIENEEKIPKTKNMKKTSQLRWALGENMAPEKVDFEDCKDVSDLKQ
YDNDEPESRSLASWIQSEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV
SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNLYGFIIKGR
SHLRNDTDVVNFVSMEFSLTDPKLEPHKWEKYCVLEIGDMLLRTAVGQVSRPMFLYVR
TNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAESSVKEKDMTKEFFENKSETWPIGES
PKGVEEGSIGKVCRTLLAKSVFNSLYASSQLEGFSAESRKLLLIAQALRDNLEPGTFD
LGGLYEAIEECLINDPWVLLNASWFNSFLAHALK"
ORIGIN
1 agcaaaagca ggtactgatt caaaatggaa gattttgtgc gacaatgctt caatccaatg
61 attgtcgagc ttgcggaaaa ggcaatgaaa gaatatgggg aagacccgaa aattgaaacg
121 aacaaatttg ctgcaatatg cacacacttg gaggtctgtt tcatgtattc ggattttcac
181 tttattgatg aacggagtga atcaataatt gtagaatctg gagacccgaa cgcattattg
241 aaacaccgat ttgaaataat tgaaggaaga gaccgaacga tggcctggac tgtggtgaat
301 agtatttgca acaccacagg agtcgagaaa cccaaatttc tcccagattt gtatgactac
361 aaagagaacc gattcattga aattggagtg acacggaggg aagttcacac atactatctg
421 gaaaaggcca acaagataaa atccgagaag acacatattc acatattctc attcacaggg
481 gaggaaatgg caaccaaagc agactacacc cttgatgaag aaagcagggc aaggattaaa
541 accaggctgt tcaccataag acaggaaatg gccagtaggg gtctatggga ttcctttcgt
601 caatccgaga gaggcgaaga aacaattgaa gaaaaatttg aaatcactgg aaccatgcgc
661 agacttgccg atcaaagcct cccaccgaac ttctccagcc ttgaaaactt tagagcctat
721 gtggatggat tcgaaccgaa cggctgcatt gagggcaagc tttctcaaat gtcaaaagaa
781 gtgaatgcta gaattgagcc atttttgaag acaacgccac gccctctcaa attacccgat
841 gggcctcctt gctctcagcg gtcgaaattc ctgctgatgg attcccttaa actaagtatt
901 gaagacccga gtcatgaggg ggaggggata ccactatacg atgcaatcaa atgcatgaag
961 acatttttcg ggtggaagga gcccaacatt gtgaaaccac atgaaaaggg tataaacccc
1021 aattacctcc tgacctggaa gcaagtactt gcagaactcc aagatattga aaatgaggag
1081 aaaatcccaa aaacaaagaa catgaaaaaa acaagccagt tgaggtgggc actcggtgag
1141 aacatggcac cagagaaagt agactttgag gactgcaaag atgttagcga tctaaaacag
1201 tatgacaatg atgaaccaga atctagatca ctagcaagct ggattcagag tgaattcaac
1261 aaggcatgtg aattgacaga ctctagttgg attgaacttg atgaaatagg agaggatgtt
1321 gctccaattg agcacattgc aagtatgaga aggaattatt ttacagcgga agtatcccat
1381 tgcagagcca ctgaatacat aatgaaggga gtttacataa acacagccct gttgaatgca
1441 tcttgtgcag ccatggatga ctttcaactg atcccaatga taagcaaatg cagaaccaaa
1501 gaaggaagac ggaaaactaa cctgtatgga ttcattataa aaggaagatc ccacttgagg
1561 aatgataccg atgtggtaaa ttttgtgagt atggaattct ctcttactga tccgaagttg
1621 gagccacaca agtgggaaaa gtactgtgtc ctcgagatag gagacatgct cctccggact
1681 gcagtgggtc aagtttcaag gccaatgttc ctgtatgtga gaaccaacgg aacctccaag
1741 atcaaaatga aatggggcat ggaaatgaga cgatgccttc ttcaatccct tcaacaaatt
1801 gaaagcatga ttgaagccga atcttctgtc aaagagaagg acatgaccaa agaattcttt
1861 gaaaacaaat cagaaacatg gccgatcgga gaatccccca aaggggtgga ggaaggctcc
1921 atcggaaagg tgtgcagaac cttactagcg aagtctgttt tcaacagttt atatgcatct
1981 tcacaacttg aggggttttc agctgaatca agaaaattgc ttctcattgc tcaggcactt
2041 agggacaacc tggaacctgg gaccttcgat cttggagggc tatatgaagc aattgaggag
2101 tgcctgatta acgatccctg ggttttgctt aatgcgtctt ggttcaactc cttcctcgca
2161 catgcactga aatagttggg gcaatgctac tacttgctat ccatactgtc caaaaaagta
2221 ccttgtttct act

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niman

Post subject: Re: H5N1 Egypt Links to China & H1N1v H3N2v

Posted: Fri Jan 13, 2012 9:59 am

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27367
Location: Pittsburgh, PA USA

LOCUS FR687278 2228 bp cRNA linear VRL 10-JAN-2012
DEFINITION Influenza A virus (A/chicken/Egypt/1/2009(H5N1)) segment 3,
complete segment.
ACCESSION FR687278
VERSION FR687278.1 GI:371805490
KEYWORDS complete viral segment.
SOURCE Influenza A virus (A/chicken/Egypt/1/2009(H5N1))
ORGANISM Influenza A virus (A/chicken/Egypt/1/2009(H5N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1
AUTHORS Kayali,G., Webby,R.J., Govorkova,E.A., Ducatez,M.F., El
Shesheny,R.A., Kandeil,A.M., Mostafa,A. and Ali,M.A.
TITLE The epidemiological and molecular aspects of Influenza H5N1 viruses
at the human-animal interface in Egypt
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 2228)
AUTHORS Ducatez,M.
TITLE Direct Submission
JOURNAL Submitted (24-AUG-2010) to the INSDC. Ducatez M., Infectious
Diseases, St Jude Children's Research Hospital, 262 Danny Thomas
Place, 38105, USA
FEATURES Location/Qualifiers
source 1..2228
/organism="Influenza A virus
(A/chicken/Egypt/1/2009(H5N1))"
/mol_type="viral cRNA"
/strain="A/chicken/Egypt/1/2009"
/serotype="H5N1"
/host="chicken"
/db_xref="taxon:881901"
/segment="3"
/country="Egypt:Qalubiya"
/collection_date="2009"
gene 1..2151
/gene="PA"
CDS 1..2151
/gene="PA"
/codon_start=1
/product="polymerase acidic protein"
/protein_id="CBW54838.1"
/db_xref="GI:371805491"
/translation="MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEV
CFMYSDFHFIDERSESIIVESGDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGVEK
PKFLPNLYDYKENRFIEIGVTRREVHTYYLEKANKIKSKKTHIHIFSFTGEEMATKAN
YTLDEESRARIKTRLFTIRQEMASKGLWDSFRQSERGEETIEEKFEITGTMRRLADQS
LPPNFSSLENFRAYVDGFEPNGCIEGKLSQMSKEVNARIEPFLKTTPRPLKLPDGPPC
CQRSKFLLMDSLKLSIEDPSHEGEGIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNY
LLTWKQVLAELQDIENEEKIPKTKNMKKTSQLRWALGENMAPEKVDFEDCKDVSDLKQ
YDNDEPESRSLASWIQSEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV
SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNLYGFIIKGR
SHLRNDTDVVNFVSMEFSLTDPKLEPHKWEKYCVLEIGDMLLRTAVGQVSRPMFLYVR
TNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAESSVKEKDMTKEFFENKSETWPIGES
PKGVEEGSIGKVCRTLLAKSVFNSLYASSQLEGFSAESRKLLLIAQALRDNLEPGTFD
LGGLYEAIEECLINDPWVLLNASWFNSFLAHALK"
ORIGIN
1 atggaagatt ttgtgcgaca atgcttcaat ccaatgattg tcgagcttgc ggaaaaggca
61 atgaaagaat atggggaaga cccgaaaatt gaaacgaaca aatttgctgc aatatgcaca
121 cacttggagg tctgtttcat gtattcggat tttcacttta ttgatgaacg gagtgaatca
181 ataattgtag aatctggaga cccgaacgca ttattgaaac accgatttga aataattgaa
241 ggaagagacc gaacgatggc ctggactgtg gtgaatagta tttgcaacac cacaggagtc
301 gagaaaccca aatttctccc aaatttgtat gactacaaag agaaccgatt cattgaaatt
361 ggagtgacac ggagggaagt tcacacatac tatctggaaa aggccaacaa gataaaatcc
421 aagaagacac atattcacat attctcattc acaggggagg aaatggcaac caaagcaaac
481 tacacccttg atgaagaaag cagggcaagg attaaaacca ggctgttcac cataagacag
541 gaaatggcca gtaagggtct atgggactcc tttcgtcagt ccgagagagg cgaagaaaca
601 attgaagaaa aatttgaaat cactggaacc atgcgcagac ttgccgatca aagcctccca
661 ccgaacttct ccagccttga aaactttaga gcctatgtgg atggattcga accgaacggc
721 tgcattgagg gcaagctttc tcaaatgtca aaagaagtga atgctagaat tgagccattt
781 ttgaagacaa cgccacgccc tctcaaatta cccgatgggc ctccttgctg tcagcggtcg
841 aaattcctgc tgatggattc ccttaaacta agtattgaag acccgagtca tgagggggag
901 gggataccac tatacgatgc aatcaaatgc atgaagacat ttttcgggtg gaaggagccc
961 aacattgtga aaccacatga aaagggtata aaccccaatt acctcctgac ctggaagcaa
1021 gtacttgcag aactccaaga tattgaaaat gaggagaaaa tcccaaaaac aaagaacatg
1081 aaaaaaacaa gccagttgag gtgggcactc ggtgagaaca tggcaccaga gaaagtagac
1141 tttgaggact gcaaagatgt tagcgatcta aaacagtatg acaatgatga accagaatct
1201 agatcactag caagctggat tcagagtgaa ttcaacaagg catgtgaatt gacagactct
1261 agttggattg aacttgatga aataggagag gatgttgctc caattgagca cattgcaagt
1321 atgagaagga attattttac agcggaagta tcccattgca gagccactga atacataatg
1381 aagggagttt acataaacac agccctgttg aatgcatctt gtgcagccat ggatgacttt
1441 caactgatcc caatgataag caaatgcaga accaaagaag gaagacggaa aactaacctg
1501 tatggattca ttataaaagg aagatcccac ttgaggaatg ataccgatgt ggtaaatttt
1561 gtgagtatgg aattctctct tactgatccg aagttggagc cacacaagtg ggaaaagtac
1621 tgtgtcctcg agataggaga catgctcctc cggactgcag tgggtcaagt ttcaaggcca
1681 atgttcctgt atgtgagaac caacggaacc tccaagatca aaatgaaatg gggcatggaa
1741 atgagacgat gccttcttca atcccttcaa caaattgaaa gcatgattga agccgaatct
1801 tctgtcaaag agaaggacat gaccaaagaa ttctttgaaa acaaatcaga aacatggccg
1861 atcggagaat cccccaaagg ggtggaggaa ggctccatcg gaaaggtgtg cagaacctta
1921 ctagcgaagt ctgttttcaa cagtttatat gcatcttcac aacttgaggg gttttcagct
1981 gaatcaagaa aattgcttct cattgctcag gcacttaggg acaacctgga acctgggacc
2041 ttcgatcttg gagggctata tgaagcaatt gaggagtgcc tgattaacga tccctgggtt
2101 ttgcttaatg cgtcttggtt caactccttc ctcgcacatg cactgaaata gttggggcaa
2161 tgctactact tgctatccat actgtccaaa ccagtacctt gtttctacta atacgacacc
2221 aatataaa

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niman

Post subject: Re: H5N1 Egypt Links to China & H1N1v H3N2v

Posted: Fri Jan 13, 2012 10:00 am

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27367
Location: Pittsburgh, PA USA

LOCUS FR687281 2209 bp cRNA linear VRL 10-JAN-2012
DEFINITION Influenza A virus (A/chicken/Egypt/Q1182/2010(H5N1)) segment 3,
complete segment.
ACCESSION FR687281
VERSION FR687281.1 GI:371805496
KEYWORDS complete viral segment.
SOURCE Influenza A virus (A/chicken/Egypt/Q1182/2010(H5N1))
ORGANISM Influenza A virus (A/chicken/Egypt/Q1182/2010(H5N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1
AUTHORS Kayali,G., Webby,R.J., Govorkova,E.A., Ducatez,M.F., El
Shesheny,R.A., Kandeil,A.M., Mostafa,A. and Ali,M.A.
TITLE The epidemiological and molecular aspects of Influenza H5N1 viruses
at the human-animal interface in Egypt
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 2209)
AUTHORS Ducatez,M.
TITLE Direct Submission
JOURNAL Submitted (24-AUG-2010) to the INSDC. Ducatez M., Infectious
Diseases, St Jude Children's Research Hospital, 262 Danny Thomas
Place, 38105, USA
FEATURES Location/Qualifiers
source 1..2209
/organism="Influenza A virus
(A/chicken/Egypt/Q1182/2010(H5N1))"
/mol_type="viral cRNA"
/strain="A/chicken/Egypt/Q1182/2010"
/serotype="H5N1"
/host="chicken"
/db_xref="taxon:881904"
/segment="3"
/country="Egypt:Qalubiya"
/collection_date="2010"
gene 1..2151
/gene="PA"
CDS 1..2151
/gene="PA"
/codon_start=1
/product="polymerase acidic protein"
/protein_id="CBW54841.1"
/db_xref="GI:371805497"
/translation="MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEV
CFMYSDFHFIDERSESIIVESGDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGVEK
PKFLPDLYDYKENRFIEIGVTRREVHTYYLEKANKIKSEKTHIHIFSFTGEEMATKAD
YTLDEESRARIKTRLFTIRQEMASRGLWDSFRQSERGEETIEEKFEITGTMRRLADQS
LPPNFSSLENFRAYVDGFEPNGCIEGKLSQMSKEVNARIEPFLKTTPRPLKLPDGPPC
SQRSKFLLMDSLKLSIEDPSHEGEGIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNY
LLTWKQVLAELQDIENEEKIPKTKNMKKTSQLRWALGENMAPEKVDFEDCKDVSDLKQ
YDNDEPKSRSLASWIQSEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV
SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKKGKRKTNLYGFIIKGK
SHLRNDTDVVNFVSMEFSLTDPKLDPHKWEKYCVLEIGDMLLRTAVGQVSRPMFLYVR
TNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAESSVKEKDMTKEFFENKSETWPIGES
PKGVEEGSIGKVCRTLLAKSVFNSLYASSQLEGFSAESRKLLLIAQALRDNLEPGTFD
LGGLYEAIEECLINDPWVLLNASWFNSFLAHALK"
ORIGIN
1 atggaagatt ttgtgcgaca atgcttcaat ccaatgattg tcgagcttgc ggaaaaggca
61 atgaaagaat atggggaaga cccgaaaatt gaaacgaaca aatttgctgc aatatgcaca
121 cacttggagg tctgtttcat gtattcggat tttcacttta ttgatgaacg gagtgaatca
181 ataattgtag aatctggaga tccgaacgca ttattgaaac accgatttga aataattgaa
241 ggaagagacc gaacgatggc ctggactgtg gtgaatagta tttgcaacac cacaggagtc
301 gagaaaccca aatttctccc agatttgtat gactacaaag agaaccgatt cattgaaatt
361 ggagtgacac ggagggaagt tcacacatac tatctggaaa aggccaacaa gataaaatcc
421 gagaagacac atattcacat attctcattc acaggggagg aaatggcaac caaagcagac
481 tacacccttg atgaagaaag cagggcaagg attaaaacca ggctgttcac cataagacag
541 gaaatggcca gtaggggtct atgggactcc tttcgtcagt ccgagagagg cgaagaaaca
601 attgaagaaa aatttgaaat cactggaacc atgcgcagac ttgccgatca aagcctccca
661 ccgaacttct ccagccttga aaactttaga gcctatgtgg atggattcga accgaacggc
721 tgcattgagg gcaagctttc tcaaatgtca aaagaagtga atgctagaat tgagccattt
781 ttgaagacaa cgccacgccc tctcaaatta cccgatgggc ctccttgctc tcagcggtcg
841 aaattcctgc tgatggattc ccttaaacta agtattgaag acccgagtca tgagggggag
901 gggataccac tatacgatgc aatcaaatgc atgaagacat ttttcgggtg gaaggagccc
961 aacattgtga aaccacatga aaagggtata aaccccaatt acctcctgac ctggaagcaa
1021 gtacttgcag aactccaaga tattgaaaat gaggagaaaa tcccaaaaac aaagaacatg
1081 aagaaaacaa gccagttgag gtgggcactc ggtgagaaca tggcaccaga gaaagtagac
1141 tttgaggact gcaaagatgt tagcgatcta aaacagtatg acaatgatga accaaaatct
1201 agatcactag caagctggat tcaaagtgaa ttcaacaagg catgtgaatt gacagactct
1261 agttggattg aacttgatga aataggagag gatgttgctc caattgagca catcgcaagt
1321 atgagaagga attatttcac agcggaagta tcccattgta gagccactga atacataatg
1381 aagggagttt acataaacac agccctgttg aatgcatctt gtgcagccat ggatgacttt
1441 caactgatcc caatgataag caaatgcaga accaaaaaag gaaaacggaa aactaacctg
1501 tatggattca ttataaaagg aaaatcccac ttgaggaatg ataccgatgt ggtaaatttt
1561 gtgagtatgg aattctctct tactgatcca aagttggacc cacacaagtg ggaaaagtac
1621 tgtgtcctcg agataggaga catgctcctc cggactgcag tgggtcaagt ttcaaggcca
1681 atgttcctgt atgtgagaac caacggaacc tccaagatca aaatgaaatg gggcatggaa
1741 atgagacgat gccttcttca atcccttcaa caaattgaaa gcatgattga agccgaatct
1801 tctgtcaaag agaaggacat gaccaaagaa ttctttgaaa acaaatcaga aacatggccg
1861 atcggagaat cccccaaagg ggtggaggaa ggctccatcg gaaaggtgtg cagaacctta
1921 ctagcgaagt ctgttttcaa cagtttatat gcatcttcac aactagaggg gttttcagct
1981 gaatcaagaa aattgcttct cattgctcag gcacttaggg acaacctgga acctgggacc
2041 ttcgatcttg gagggctata tgaagcaatt gaggagtgcc tgattaacga tccctgggtt
2101 ttgcttaatg cgtcttggtt caactccttc ctcgcacatg cactgaaata gttggggcaa
2161 tgctactact tgctatccat actgtccaaa aaagtacctt gtttctact

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niman

Post subject: Re: H5N1 Egypt Links to China & H1N1v H3N2v

Posted: Fri Jan 13, 2012 10:01 am

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27367
Location: Pittsburgh, PA USA

LOCUS FR687279 2233 bp cRNA linear VRL 10-JAN-2012
DEFINITION Influenza A virus (A/chicken/Egypt/Q1011/2010(H5N1)) segment 3,
complete segment.
ACCESSION FR687279
VERSION FR687279.1 GI:371805492
KEYWORDS complete viral segment.
SOURCE Influenza A virus (A/chicken/Egypt/Q1011/2010(H5N1))
ORGANISM Influenza A virus (A/chicken/Egypt/Q1011/2010(H5N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1
AUTHORS Kayali,G., Webby,R.J., Govorkova,E.A., Ducatez,M.F., El
Shesheny,R.A., Kandeil,A.M., Mostafa,A. and Ali,M.A.
TITLE The epidemiological and molecular aspects of Influenza H5N1 viruses
at the human-animal interface in Egypt
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 2233)
AUTHORS Ducatez,M.
TITLE Direct Submission
JOURNAL Submitted (24-AUG-2010) to the INSDC. Ducatez M., Infectious
Diseases, St Jude Children's Research Hospital, 262 Danny Thomas
Place, 38105, USA
FEATURES Location/Qualifiers
source 1..2233
/organism="Influenza A virus
(A/chicken/Egypt/Q1011/2010(H5N1))"
/mol_type="viral cRNA"
/strain="A/chicken/Egypt/Q1011/2010"
/serotype="H5N1"
/host="chicken"
/db_xref="taxon:881902"
/segment="3"
/country="Egypt:Qalubiya"
/collection_date="2010"
gene 25..2175
/gene="PA"
CDS 25..2175
/gene="PA"
/codon_start=1
/product="polymerase acidic protein"
/protein_id="CBW54839.1"
/db_xref="GI:371805493"
/translation="MEDFVRQCFNPMIVELAEKAMKEYGEDPKTETNKFAAICTHLEV
CFMYSDFHFIDERSESIIVESGDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGVEK
PKFLPDLYDYKENRFIEIGVTRREVHTYYLEKSNKIKSEKTHIHIFSFTGEEMATKAD
YTLDEESRARIKTRLFTIRQEMASRGLWDSFRQSERGEETIEEKFEITGTMRRLADQS
LPPNFSSLESFRAYVDGFEPNGCIEGKLSQMSKEVNARIEPFLKTTPRPLKLPDGPPC
SQRSKFLLMDSLKLSIEDPSHEGEGIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNY
LLTWKQVLAELQDIENEEKIPKTKNMKKTSQLRWALGENMAPEKVDFEDCKDVSDLKQ
YDNDEPESRSLASWIQSEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV
SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNLYGFIIKGR
SHLRNDTDVVNFVSMEFSLTDPKLEPHKWEKYCVLEIGDMLLRTAVGQVSRPMFLYVR
TNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAESSVKEKDMTKEFFENKSETWPIGES
PRGVEEGSIGKVCRTLLAKSVFNSLYASSQLEGFSAESRKLLLIAQALRDNLEPGTFD
LGGLYEAIEECLINDPWVLLNASWFNSFLAHALK"
ORIGIN
1 agcaaaagca ggtactgatt caaaatggaa gattttgtgc gacaatgctt caatccaatg
61 attgtcgagc ttgcggaaaa ggcaatgaaa gaatatgggg aagacccgaa aactgaaacg
121 aacaaatttg ctgcaatatg cacacacttg gaggtctgtt tcatgtattc ggattttcac
181 tttattgatg aacggagtga atcaataatt gtagaatctg gagatccgaa cgcattattg
241 aaacaccgat ttgaaataat tgaaggaaga gaccgaacga tggcctggac tgtggtgaat
301 agtatttgca acaccacagg agtcgagaaa cctaaatttc tcccagattt gtatgactac
361 aaagagaacc gattcattga aattggagtg acacggaggg aagttcacac atactatctg
421 gaaaagtcca acaagataaa atccgagaag acacatattc acatattctc attcacaggg
481 gaggaaatgg caaccaaagc agactacacc cttgatgaag aaagcagggc gaggattaaa
541 accaggctgt tcaccataag acaggaaatg gccagtaggg gtctatggga ttcctttcgt
601 caatccgaga gaggcgaaga aacaattgaa gaaaaatttg aaatcactgg aaccatgcgc
661 agacttgccg atcaaagcct cccaccgaac ttctccagcc ttgaaagctt tagagcctat
721 gtggatggat tcgaaccgaa cggctgcatt gagggcaagc tttctcaaat gtcaaaagaa
781 gtgaatgcta gaattgagcc atttttgaag acaacgccac gccctctcaa attacccgat
841 gggcctcctt gctctcagcg gtcgaaattc ctgctgatgg attcccttaa actaagtatt
901 gaagacccga gccatgaggg ggaggggata ccactatatg atgcaatcaa atgcatgaag
961 acatttttcg ggtggaagga gcccaacatt gtgaaaccac atgaaaaggg tataaacccc
1021 aattacctcc tgacctggaa gcaagtactt gcagaactcc aggatattga aaatgaggag
1081 aaaatcccaa aaacaaagaa catgaaaaaa acaagccagt tgaggtgggc actcggtgag
1141 aacatggcac cagagaaagt agactttgag gactgcaaag atgttagcga tctaaaacag
1201 tatgacaatg atgaaccaga atctagatca ctagcaagct ggattcaaag tgaattcaac
1261 aaggcatgtg aattgacaga ctctagttgg attgaacttg atgaaatagg agaggatgtt
1321 gctccaattg agcacattgc aagtatgaga aggaattatt ttacagcgga agtatcccat
1381 tgcagagcca ctgaatacat aatgaaggga gtttacataa acacagccct gttgaatgca
1441 tcttgtgcag ccatggatga ctttcaactg atcccaatga taagcaaatg cagaaccaaa
1501 gaaggaagac ggaaaactaa cctatatgga ttcattataa aaggaagatc ccacttgagg
1561 aatgatactg atgtggtaaa ttttgtgagt atggaattct ctcttactga tccgaaattg
1621 gagccacaca agtgggaaaa gtactgtgtc ctcgagatag gagacatgct cctccggact
1681 gcagtgggtc aagtttcaag gccaatgttc ctatatgtga gaaccaacgg aacctccaag
1741 atcaaaatga aatggggcat ggaaatgaga cgatgccttc ttcaatccct tcaacaaatt
1801 gaaagcatga ttgaagccga atcttctgtc aaagagaagg acatgaccaa agaattcttt
1861 gaaaacaaat cagaaacatg gccgatagga gaatccccca gaggagtgga ggaaggctcc
1921 atcggaaagg tgtgcagaac cttactggcg aagtctgttt tcaacagttt atatgcatct
1981 tcacaactag aggggttttc agctgaatca agaaaattgc ttctcattgc tcaggcactt
2041 agggacaacc tggaacctgg gaccttcgat cttggaggac tatatgaagc aattgaggag
2101 tgcctgatta acgatccctg ggttttgctt aatgcgtctt ggttcaactc cttcctcgca
2161 catgcactga aatagttggg gcaatgctac tacttgctat ccatactgtc caaaaaagta
2221 ccttgtttct act

_________________
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niman

Post subject: Re: H5N1 Egypt Links to China & H1N1v H3N2v

Posted: Fri Jan 13, 2012 10:06 am

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27367
Location: Pittsburgh, PA USA

T81C

EPI343770 A/shorebird/Delaware Bay/18/2002 (A/H1N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI343515 A/blue-winged teal/Alberta/222/2005 (A/H3N8) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI342578 A/chicken/Fujian/G9/2009 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI339167 A/Maine/06/2011 (A/H3N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI333827 A/gadwall/Illinois/3860/2009 (A/H6N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI331837 A/environment/Maryland/1655/2006 (A/H4N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI331836 A/environment/Maryland/2103/2006 (A/H0) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI331835 A/environment/Maryland/2114/2006 (A/H0) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI328393 A/mallard/California/5219/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI328257 A/mallard/California/8028/2008 (A/H11N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI328177 A/mallard/California/9573/2008 (A/H4N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327825 A/mallard/California/5212/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327817 A/mallard/California/5222/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327809 A/mallard/California/5250/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327793 A/mallard/California/5276/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327777 A/mallard/California/5296/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327769 A/mallard/California/5495/2009 (A/H4N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327761 A/mallard/California/5502/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327753 A/mallard/California/5149/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327745 A/mallard/California/5174/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327729 A/mallard/California/5205/2009 (A/H0) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327713 A/mallard/California/5319/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327697 A/mallard/California/5359/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327689 A/mallard/California/5386/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327681 A/mallard/California/5491/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327673 A/mallard/California/5191/2009 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327565 A/silver gull/Tasmania/062/2006 (A/H13N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327454 A/duck/New York/53294-6/2005 (A/H2N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327334 A/chicken/Italy/4616/2003 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI326810 A/duck/Korea/U1-5/2007 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI326802 A/duck/Korea/U14-1/2007 (A/H3N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI317079 A/Boston/706/2009 (A/H1N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI314928 A/ostrich/Suzhou/097/2003 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI314130 A/herring gull/Atyrau/2186/2007 (A/H11N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI301611 A/chicken/Iran/10VIR854-3/2009 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI301580 A/chicken/Saudi Arabia/08vir3489-50-as118/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI301572 A/chicken/Saudi Arabia/08vir3489-51-as366/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI301564 A/chicken/Saudi Arabia/08vir3489-47-as215/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI301540 A/quail/Saudi Arabia/08vir3489-46-as104/2006 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI301510 A/chicken/Jordan/09vir579-2/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI301502 A/chicken/Jordan/09vir579-3/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI301494 A/chicken/Jordan/436-2/2010 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI301486 A/chicken/Jordan/436-1/2010 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI301478 A/chicken/Jordan/1436-997/2004 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI301470 A/chicken/Jordan/1436-643/2004 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI301462 A/duck/Jordan/1436-890/2004 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI298551 A/mallard/Interior Alaska/6MP0915/2006 (A/H3N8) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI296597 A/Eurasian wigeon/Netherlands/4/2007 (A/H10N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI296549 A/Bewicks swan/Netherlands/1/2007 (A/H1N5) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI296533 A/mallard/Netherlands/4/2006 (A/H10N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294664 A/chicken/Egypt/3982-78/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294643 A/chicken/Egypt/3982-52/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294636 A/chicken/Egypt/3982-50/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294622 A/chicken/Egypt/3982-43/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294615 A/duck/Egypt/3982-21/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294594 A/chicken/Egypt/3982-14/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294587 A/chicken/Egypt/3982-13/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294559 A/chicken/Egypt/3982-4/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294552 A/chicken/Egypt/3982-3/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294538 A/chicken/Egypt/2095-75/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294531 A/chicken/Egypt/2095-70/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294524 A/chicken/Egypt/2095-68/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294517 A/chicken/Egypt/2095-65/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294508 A/chicken/Egypt/2095-39/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294494 A/chicken/Egypt/1553-26/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294487 A/chicken/Egypt/1553-15/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294473 A/chicken/Egypt/1553-6/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI287582 A/chicken/West Bengal/82613/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI286525 A/ruddy turnstone/Delaware/1252/2002 (A/H2N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI286522 A/ruddy turnstone/New Jersey/980/2002 (A/H2N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI286521 A/ruddy turnstone/New Jersey/954/2002 (A/H2N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI286520 A/ruddy turnstone/Delaware/576/2002 (A/H2N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI286519 A/ruddy turnstone/New Jersey/398/2002 (A/H2N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI286516 A/ruddy turnstone/New Jersey/888/2002 (A/H2N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI285966 A/chicken/Saudi Arabia/EPD-22-01/2002 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI285901 A/Northern shoveler/Utah/466781/2006 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI284604 A/mallard/Bavaria/185-26/2008 (A/H1N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI284596 A/mallard/Bavaria/185-8/2008 (A/H1N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI276259 A/chicken/Egypt/9402-CLEVB213/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI275733 A/chicken/Gansu/44/2004 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI275717 A/chicken/Anhui/39/2004 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI271695 A/swine/Banten/UT3081/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI271687 A/swine/Banten/UT3063/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI271679 A/swine/Banten/UT3062/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI271671 A/swine/Banten/UT2071/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI269950 A/Brisbane/1/2010 (A/H1N1 pdm09) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI267719 A/New York/3834/2010 (A/H1N1 pdm09) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI257219 A/Anas platyrhynchos/Belgium/09-762-P1/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI257210 A/Anas platyrhynchos/Belgium/09-762/2008 (A/H1N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI254993 A/New York/6977/2009 (A/H1N1 pdm09) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI251596 A/common teal/Netherlands/10/2000 (A/H1N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI248912 A/northern pintail/Alaska/44419-175/2008 (A/H4N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI245579 A/San Diego/INS42/2009 (A/H1N1 pdm09) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI243270 A/R(duck/Mongolia/54/01-duck/Mongolia/47/01) (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI242264 A/duck/Alberta/49/1976 (A/H7) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI239094 A/chicken/Hubei/wh/1997 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI236337 A/ruddy turnstone/New Jersey/1315/2002 (A/H2N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI236317 A/ruddy turnstone/Delaware/669/2002 (A/H2N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI236286 A/ruddy turnstone/Delaware/1687/2002 (A/H2N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI236256 A/ruddy turnstone/Delaware/1134/2002 (A/H2N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233987 A/chicken/Nigeria/08RS848-97/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233971 A/chicken/Nigeria/08RS848-94/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233907 A/chicken/Nigeria/08RS848-83/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233867 A/chicken/Nigeria/08RS848-76/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233859 A/chicken/Nigeria/08RS848-75/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233803 A/chicken/Nigeria/08RS848-67/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233795 A/water fowl/Nigeria/08RS848-66/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233787 A/turkey/Nigeria/08RS848-61/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233779 A/chicken/Nigeria/08RS848-60/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233747 A/goose/Nigeria/08RS848-56/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233739 A/chicken/Nigeria/08RS848-54/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233731 A/chicken/Nigeria/08RS848-52/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233691 A/chicken/Nigeria/08RS848-44/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233539 A/chicken/Nigeria/08RS848-121/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233531 A/duck/chicken/Nigeria/08RS848-120/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233515 A/chicken/Nigeria/08RS848-118/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233507 A/chicken/Nigeria/08RS848-117/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233475 A/chicken/Nigeria/08RS848-106/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233467 A/chicken/Nigeria/08RS848-104/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI233451 A/chicken/Nigeria/08RS848-100/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI230665 A/environment/Maryland/2114/2006 (A/H4N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI229942 A/black headed gull/Mongolia/1766/2006 (A/H13N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI229934 A/black headed gull/Mongolia/1756/2006 (A/H16N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI227292 A/Mallard/Huadong/S/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI227270 A/mallard/British Columbia/07826/2005 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI227262 A/mallard/British Columbia/07706/2005 (A/H3N8) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI226901 A/blue-winged teal/Alberta/11646/2005 (A/H3N8) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI225786 A/turkey/Israel/1608/2006 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI225369 A/ruddy turnstone/Delaware/760/2006 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI224997 A/chicken/Israel/1638/2006 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI224989 A/chicken/Israel/1548/2006 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI224981 A/chicken/Israel/1525/2006 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI224488 A/environment/Maryland/2115/2006 (A/H4N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI223119 A/chicken/Afghanistan/329-8vir09-AFG-Heart7/2009 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI223111 A/chicken/Afghanistan/329-7vir09-AFG-Heart6/2009 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI221823 A/chicken/Israel/933/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI221815 A/chicken/Israel/728/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI221807 A/chicken/Israel/449/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI221799 A/chicken/Israel/402/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI221791 A/chicken/Israel/386/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI221783 A/chicken/Israel/215/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI221768 A/chicken/Israel/1033/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI220334 A/chicken/Israel/524/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI220326 A/chicken/Israel/292/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI220298 A/chicken/Henan/L3/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI220248 A/avian/Israel/314/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI220240 A/avian/Israel/313/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI210040 A/chicken/Rostov/864/07 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI190433 A/chicken/Egypt/083/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI188437 A/mallard/Minnesota/Sg-00579/2008 (A/H1N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI182150 A/Bewick's swan/Netherlands/5/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI182134 A/laughing gull/Delaware/12/2006 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI182118 A/mallard/Netherlands/33/2006 (A/H7N8) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181998 A/chicken/Egypt/0836/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181974 A/common teal/Netherlands/1/2005 (A/H8N4) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181958 A/mallard/Netherlands/3/2005 (A/H3N8) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181406 A/chicken/Israel/953/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181405 A/chicken/Israel/951/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181404 A/chicken/Israel/883/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181403 A/chicken/Israel/869/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181402 A/chicken/Israel/702/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181401 A/chicken/Israel/694/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181400 A/turkey/Israel/689/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181399 A/chicken/Israel/375/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181398 A/chicken/Israel/330/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181397 A/chicken/Israel/310/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181396 A/chicken/Israel/184/2009 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181395 A/chicken/Israel/182/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181394 A/chicken/Israel/54/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181393 A/chicken/Israel/1040/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI178498 A/Duck/Italy/268302/2004 (A/H10N4) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI177817 A/chicken/Pakistan/UDL-04/2007 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI177809 A/chicken/Pakistan/UDL-03/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI177801 A/chicken/Pakistan/UDL-02/2008 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI174823 A/cormorant/Denmark/74-68899-G2/2002 (A/H16N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI172994 A/swine/Nakhon pathom/NIAH586-1/2005 (A/H3N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI169688 A/duck/Mongolia/47/01 (A/H7N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI167841 A/peregrine falcon/Hong Kong/5211/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI166007 A/blue winged teal/TX/27/2002 (A/H1N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI165999 A/blue winged teal/TX/43/2002 (A/H1N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI164815 A/chicken/Italy/682/2003 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI164752 A/Chicken/Anhui/39/2004 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI160926 A/chicken/Nigeria/OG11/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI160925 A/chicken/Nigeria/OG10/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI160923 A/chicken/Nigeria/OG5/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI160922 A/chicken/Nigeria/OG4/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI160921 A/chicken/Nigeria/OG2/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI159886 A/chicken/Egypt/1709-8VIR08/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI158609 A/pintail/MN/479/99 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI154947 A/turkey/Egypt/1709-9VIR08/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI154942 A/chicken/Egypt/1709-6/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI154937 A/chicken/Egypt/1709-5/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI154917 A/chicken/Egypt/1709-2/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI154874 A/rook/Rostov-on-Don/26/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI153719 A/chicken/Iarah/1376/03 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI153718 A/chicken/Talmei Elazar/1304/03 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI153714 A/chicken/Israel/909/2005 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI153712 A/chicken/Israel/853/2005 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI153710 A/chicken/Israel/793/2005 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI152838 A/turkey/Italy/9739/2002 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI152008 A/chicken/Benin/6693-16/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI141218 A/chicken/Israel/1055/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI139538 A/Chicken/Hong Kong/873.3/01 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI139536 A/Chicken/Hong Kong/715.5/01 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI135157 A/duck/Shantou/1101/2001 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI133603 A/pigeon/Rostov-on-Don/6/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI133585 A/muscovy duck/Rostov-on-Don/51/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI133512 A/starling/Rostov-on-Don/39/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI131951 A/turkey/Italy/4130/2004 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI131932 A/turkey/Italy/8535/02 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI128410 A/chicken/Rostov-on-Don/35/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI125363 A/turkey/Italy/68819/03 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI125361 A/turkey/Italy/121964/03 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI125359 A/mallard/Italy/299/05 (A/H7N7) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI125353 A/turkey/Italy/97500/03 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI124929 A/chicken/Nigeria/1071-29/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI114686 A/golden pheasant/Thailand/VSMU-21-SPB/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI113276 A/goose/Yunnan/3644/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI113238 A/goose/Yunnan/3315/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI113236 A/Guinea fowl/Shantou/1341/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI105420 A/cinnamon teal/Bolivia/4537/2001 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI102453 A/chicken/Taiwan/0305/04 (A/H6N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI88936 A/semi-palmated sandpiper/Brazil/43/1990 (A/H2N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI87995 A/mallard duck/ALB/279/1977 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI87983 A/widgeon/Alberta/284/1977 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI87966 A/blue-winged teal/ALB/295/1977 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI86580 A/shorebird/DE/68/2004 (A/H13N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI77457 A/turkey/Italy/3477/2004 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI77438 A/turkey/Italy/3829/2004 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI77419 A/turkey/Italy/2685/2003 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI77400 A/turkey/Italy/9742/2002 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI68154 A/turkey/Italy/8000/2002 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI63175 A/turkey/Italy/2043/2003 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI60626 A/turkey/Italy/3337/2004 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI60607 A/turkey/Italy/2987/2003 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI60588 A/turkey/Italy/4608/2003 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI60303 A/turkey/Italy/1010/2003 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI60284 A/turkey/Italy/3620/2003 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI58555 A/quail/Italy/3347/2004 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI58536 A/turkey/Italy/8912/2002 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI58517 A/turkey/Italy/3807/2004 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI58498 A/turkey/Italy/251/2003 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI58479 A/turkey/Italy/4479/2004 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI22465 A/pintail/Alberta/22/97 (A/H2N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI21833 A/swine/Saskatchewan/18789/02 (A/H1N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI21442 A/turkey/Italy/214845/02 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI21440 A/turkey/Italy/220158/2002 (A/H7N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI17758 A/Chicken/HongKong/NT873.3/01 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI17756 A/Chicken/HongKong/NT873.3/01 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI14812 A/Goose/Hong Kong/ww491/2000 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI12042 A/Hong Kong/1073/99 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI11583 A/Chicken/Pakistan/2/99 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI7811 A/Hong Kong/1073/99 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI3407 A/duck/Mongolia/54/01 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI3368 A/duck/Hokkaido/447/2000 (A/H5N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI1648 A/duck/Hokkaido/Vac-1/04 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)

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niman

Post subject: Re: H5N1 Egypt Links to China & H1N1v H3N2v

Posted: Fri Jan 13, 2012 10:17 am

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27367
Location: Pittsburgh, PA USA

C91T

EPI337140 A/Anhui/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI337106 A/Shanghai/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI337100 A/Guangdong/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI337082 A/Sichuan/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI327574 A/red-necked stint/Western Australia/5745/1982 (A/H12N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI326789 A/duck/Korea/DY106/2007 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI314928 A/ostrich/Suzhou/097/2003 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI314366 A/chicken/Egypt/CL6/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI314349 A/duck/Egypt/D2br10/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI297660 A/duck/Victoria/23/1981 (A/H1N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294657 A/poultry/Egypt/3982-56/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294650 A/poultry/Egypt/3982-55/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294643 A/chicken/Egypt/3982-52/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294636 A/chicken/Egypt/3982-50/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294629 A/chicken/Egypt/3982-44/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294622 A/chicken/Egypt/3982-43/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294608 A/chicken/Egypt/3982-20/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294601 A/chicken/Egypt/3982-19/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294587 A/chicken/Egypt/3982-13/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294580 A/duck/Egypt/3982-12/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294573 A/chicken/Egypt/3982-9/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294566 A/chicken/Egypt/3982-5/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294559 A/chicken/Egypt/3982-4/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294552 A/chicken/Egypt/3982-3/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294545 A/chicken/Egypt/3982-2/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294517 A/chicken/Egypt/2095-65/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294487 A/chicken/Egypt/1553-15/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294480 A/chicken/Egypt/1553-13/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI294466 A/chicken/Egypt/1553-1/2010 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI280108 A/Shanghai/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI280100 A/Guangdong/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI280028 A/Anhui/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI276259 A/chicken/Egypt/9402-CLEVB213/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI276253 A/chicken/Egypt/08124S-NLQP/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI268966 A/duck/Fujian/12035/2005 (A/H6N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI259643 A/chicken/Egypt/C1Li9/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI259642 A/chicken/Egypt/C1Lu3/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI259641 A/chicken/Egypt/C1Tr211/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI259640 A/duck/Egypt/D3Li13/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI259639 A/duck/Egypt/D3Lu13/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI259638 A/duck/Egypt/D2Li5/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI259637 A/duck/Egypt/D2Br236/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI259636 A/duck/Egypt/D1Li10/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI259635 A/duck/Egypt/D1Br17/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI259634 A/duck/Egypt/D1Tr2/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI244423 A/turkey/Egypt/7/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI240188 A/red-necked stint/Western Australia/4126/1980 (A/H4N8) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI227143 A/duck/Lang Son/201/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI226991 A/chicken/Lang Son/200/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI225099 A/duck/Ninh Binh /203/2006 (A/H5) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI225086 A/duck/Hai Phong /208/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI224776 A/Shanghai/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI221915 A/duck/Korea/S72/2007 (A/H3N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI221907 A/duck/Korea/S71/2007 (A/H3N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI190441 A/duck/Egypt/0871/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI190433 A/chicken/Egypt/083/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI181998 A/chicken/Egypt/0836/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI170735 A/chicken/Vietnam/200/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI170727 A/duck/Vietnam/201/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI170711 A/duck/Vietnam/203/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI170703 A/duck/Vietnam/204/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI170687 A/duck/Vietnam/206/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI168455 A/duck/Vietnam/342/2001 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI167467 A/red-necked stint/Western Australia/4094/1984 (A/H4N8) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI165406 A/equine/Sachiyama/1/1971 (A/H3N8) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI164332 A/goose/Yunnan/5141/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI164229 A/Sichuan/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI159886 A/chicken/Egypt/1709-8VIR08/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI156779 A/duck/Egypt/5169-4/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI156771 A/chicken/Egypt/5169-3/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI156734 A/duck/Egypt/452-1VIR07/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI154947 A/turkey/Egypt/1709-9VIR08/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI154942 A/chicken/Egypt/1709-6/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI154937 A/chicken/Egypt/1709-5/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI154931 A/chicken/Egypt/1709-4VIR08/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI154917 A/chicken/Egypt/1709-2/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI154911 A/chicken/Egypt/1709-1VIR08/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI154903 A/chicken/Egypt/452-2/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI152047 A/chicken/Egypt/5169-2/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI152039 A/duck/Egypt/5169-1/2007 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI141218 A/chicken/Israel/1055/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI131913 A/red-necked stint/Western Australia/4915/1984 (A/H3N8) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI131875 A/red-necked stint/Western Australia/5745/1982 (A/H12N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI124592 A/Egypt/902786/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI124590 A/Egypt/902782/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI118281 A/duck/Hong Kong/698/1979 (A/H5N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI118277 A/duck/Hong Kong/342/78 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI118273 A/goose/Hong Kong/23/1978 (A/H5N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI113294 A/chicken/Guangxi/1951/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI113198 A/duck/Guangxi/4665/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI113196 A/duck/Guangxi/4196/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI113194 A/duck/Guangxi/4184/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI113036 A/duck/Guangxi/89/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI110472 A/Philippines/344/2004 (A/H1N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI106024 A/China/GD01/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI99878 A/duck/Denmark/65047/04 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI89650 A/red-necked stint/Australia/5745/1981 (A/H12N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI89622 A/red-necked stint/Australia/4189/1980 (A/H4N8) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI89497 A/duck/Hong Kong/562/1979 (A/H10N9) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI89345 A/goose/Hong Kong/23/1978 (A/H5N3) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI89328 A/duck/Hong Kong/342/1978 (A/H5N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI89033 A/Quail/Nanchang/7-026/2000 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI89016 A/Chicken/Nanchang/7-010/2000 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI76504 A/red-necked stint/Western Australia/4923/1983 (A/H3N8) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI58650 A/turkey/Egypt/2253-2/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI58631 A/chicken/Egypt/2253-1/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16130 A/Chicken/Nanchang/7-010/2000 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16128 A/Duck/Nanchang/9-091/2000 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16126 A/Chicken/Nanchang/1-020/2001 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16124 A/Quail/Nanchang/2-040/2001 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16122 A/Duck/Nanchang/2-182/2001 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16120 A/Duck/Nanchang/1-181/2001 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16116 A/Quail/Nanchang/3-140/2001 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16108 A/Duck/Nanchang/9-385/2000 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16062 A/chicken/Nanchang/3-201/01 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16058 A/Chicken/Nanchang/1-101/2001 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16054 A/Quail/Nanchang/10-028/2000 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16050 A/Duck/Nanchang/1-100/2001 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16048 A/Chicken/Nanchang/2-120/2001 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16042 A/Chicken/Nanchang/12-301/2000 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16028 A/Quail/Nanchang/7-026/2000 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16026 A/Duck/Nanchang/1-161/2001 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16022 A/Chicken/Nanchang/9-220/2000 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16020 A/Duck/Nanchang/8-198/2000 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16018 A/Pigeon/Nanchang/11-045/2000 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI16016 A/Pigeon/Nanchang/8-142/2000 (A/H3N6) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)

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niman

Post subject: Re: Egypt H5N1 Links to China H5N1 & US H1N1v H3N2v

Posted: Fri Jan 13, 2012 10:31 am

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27367
Location: Pittsburgh, PA USA

T100C
FR687280.1 Influenza A virus (A/chicken/Egypt/Q1185/2010(H5N1)) segment 3, complete segment 3984 3984 100% 0.0 100%
FR687278.1 Influenza A virus (A/chicken/Egypt/1/2009(H5N1)) segment 3, complete segment 3943 3943 100% 0.0 99%
FR687281.1 Influenza A virus (A/chicken/Egypt/Q1182/2010(H5N1)) segment 3, complete segment 3916 3916 100% 0.0 99%
FR687279.1 Influenza A virus (A/chicken/Egypt/Q1011/2010(H5N1)) segment 3, complete segment 3894 3894 100% 0.0 99%
CY041295.1 Influenza A virus (A/chicken/Egypt/0836/2008(H5N1)) segment 3, complete sequence 3858 3858 98% 0.0 99%
CY044037.1 Influenza A virus (A/chicken/Egypt/083/2008(H5N1)) segment 3, complete sequence 3819 3819
EPI341461 A/Cambodia/V0401301/2011 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI341459 A/Cambodia/V0606311/2011 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI341458 A/chicken/Cambodia/TLC1/2009 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI341457 A/chicken/Cambodia/TLC2/2009 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI321743 A/muscovy duck/Vietnam/OIE-559/2011 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI314191 A/turkey/Wisconsin/1/1966 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI314173 A/turkey/Ontario/6118/1968 (A/H8N4) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI276053 A/great cormorant/Tibet/12/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI243205 A/turkey/Wisconsin/66 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI243192 A/turkey/Wisconsin/1/1966 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI243164 A/turkey/Ontario/6118/1968 (A/H8N4) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI242733 A/turkey/WI/1966 (A/H9N2) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI225812 A/bar-headed goose/Qinghai/F/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI164213 A/Indonesia/8228/2008 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI152288 A/quail/Thailand/CU-331/06 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI152281 A/quail/Thailand/CU-332/06 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI152273 A/quail/Thailand/CU-333/06 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI152265 A/watercock/Thailand/CU-334/06 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI136202 A/chicken/Yunnan/1628/2003 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI136031 A/duck/Yunnan/971/2002 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI136012 A/duck/Yunnan/862/2002 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI113192 A/duck/Guangxi/4016/2005 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI105990 A/swan/Qinghai/01/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI105988 A/black-headed gull/Qinghai/3/2006 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI86654 A/pintail duck/ALB/219/1977 (A/H1N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)
EPI61896 A/swine/Iowa/1/1976 (A/H1N1) segment 4 (HA) 27.0 7.427943e+00 14/14 (100%)
EPI21266 A/duck/Fujian/13/2002 (A/H5N1) segment 3 (PA) 27.0 7.427943e+00 14/14 (100%)

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niman

Post subject: Re: Egypt H5N1 Links to China H5N1 & US H1N1v H3N2v

Posted: Fri Jan 13, 2012 11:10 am

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27367
Location: Pittsburgh, PA USA

C110T
FR687280.1 Influenza A virus (A/chicken/Egypt/Q1185/2010(H5N1)) segment 3, complete segment 3984 3984 100% 0.0 100%
FR687278.1 Influenza A virus (A/chicken/Egypt/1/2009(H5N1)) segment 3, complete segment 3943 3943 100% 0.0 99%
FR687281.1 Influenza A virus (A/chicken/Egypt/Q1182/2010(H5N1)) segment 3, complete segment 3916 3916 100% 0.0 99%
FR687279.1 Influenza A virus (A/chicken/Egypt/Q1011/2010(H5N1)) segment 3, complete segment 3894 3894 100% 0.0 99%
CY041295.1 Influenza A virus (A/chicken/Egypt/0836/2008(H5N1)) segment 3, complete sequence 3858 3858 98% 0.0 99%
CY044037.1 Influenza A virus (A/chicken/Egypt/083/2008(H5N1)) segment 3, complete sequence 3819 3819

EPI337140 A/Anhui/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337106 A/Shanghai/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337100 A/Guangdong/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337082 A/Sichuan/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI327574 A/red-necked stint/Western Australia/5745/1982 (A/H12N9) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI326789 A/duck/Korea/DY106/2007 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI314928 A/ostrich/Suzhou/097/2003 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI314366 A/chicken/Egypt/CL6/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI314349 A/duck/Egypt/D2br10/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI297660 A/duck/Victoria/23/1981 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294657 A/poultry/Egypt/3982-56/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294650 A/poultry/Egypt/3982-55/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294643 A/chicken/Egypt/3982-52/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294636 A/chicken/Egypt/3982-50/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294629 A/chicken/Egypt/3982-44/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294622 A/chicken/Egypt/3982-43/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294608 A/chicken/Egypt/3982-20/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294601 A/chicken/Egypt/3982-19/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294587 A/chicken/Egypt/3982-13/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294580 A/duck/Egypt/3982-12/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294573 A/chicken/Egypt/3982-9/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294566 A/chicken/Egypt/3982-5/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294559 A/chicken/Egypt/3982-4/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294552 A/chicken/Egypt/3982-3/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294545 A/chicken/Egypt/3982-2/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294517 A/chicken/Egypt/2095-65/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294487 A/chicken/Egypt/1553-15/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294480 A/chicken/Egypt/1553-13/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294466 A/chicken/Egypt/1553-1/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280108 A/Shanghai/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280100 A/Guangdong/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280028 A/Anhui/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276259 A/chicken/Egypt/9402-CLEVB213/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276253 A/chicken/Egypt/08124S-NLQP/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI268966 A/duck/Fujian/12035/2005 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI259643 A/chicken/Egypt/C1Li9/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI259642 A/chicken/Egypt/C1Lu3/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI259641 A/chicken/Egypt/C1Tr211/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI259640 A/duck/Egypt/D3Li13/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI259639 A/duck/Egypt/D3Lu13/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI259638 A/duck/Egypt/D2Li5/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI259637 A/duck/Egypt/D2Br236/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI259636 A/duck/Egypt/D1Li10/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI259635 A/duck/Egypt/D1Br17/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI259634 A/duck/Egypt/D1Tr2/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI244423 A/turkey/Egypt/7/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI240188 A/red-necked stint/Western Australia/4126/1980 (A/H4N8) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI227143 A/duck/Lang Son/201/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI226991 A/chicken/Lang Son/200/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI225099 A/duck/Ninh Binh /203/2006 (A/H5) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI225086 A/duck/Hai Phong /208/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI224776 A/Shanghai/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI221915 A/duck/Korea/S72/2007 (A/H3N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI221907 A/duck/Korea/S71/2007 (A/H3N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI190441 A/duck/Egypt/0871/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI190433 A/chicken/Egypt/083/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI181998 A/chicken/Egypt/0836/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI170735 A/chicken/Vietnam/200/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI170727 A/duck/Vietnam/201/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI170711 A/duck/Vietnam/203/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI170703 A/duck/Vietnam/204/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI170687 A/duck/Vietnam/206/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI168455 A/duck/Vietnam/342/2001 (A/H5N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI167467 A/red-necked stint/Western Australia/4094/1984 (A/H4N8) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI165406 A/equine/Sachiyama/1/1971 (A/H3N8) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI164332 A/goose/Yunnan/5141/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI164229 A/Sichuan/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI159886 A/chicken/Egypt/1709-8VIR08/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI156779 A/duck/Egypt/5169-4/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI156771 A/chicken/Egypt/5169-3/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI156734 A/duck/Egypt/452-1VIR07/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI154947 A/turkey/Egypt/1709-9VIR08/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI154942 A/chicken/Egypt/1709-6/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI154937 A/chicken/Egypt/1709-5/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI154931 A/chicken/Egypt/1709-4VIR08/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI154917 A/chicken/Egypt/1709-2/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI154911 A/chicken/Egypt/1709-1VIR08/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI154903 A/chicken/Egypt/452-2/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI152047 A/chicken/Egypt/5169-2/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI152039 A/duck/Egypt/5169-1/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI141218 A/chicken/Israel/1055/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI131913 A/red-necked stint/Western Australia/4915/1984 (A/H3N8) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI131875 A/red-necked stint/Western Australia/5745/1982 (A/H12N9) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI124592 A/Egypt/902786/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI124590 A/Egypt/902782/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI118281 A/duck/Hong Kong/698/1979 (A/H5N3) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI118277 A/duck/Hong Kong/342/78 (A/H5N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI118273 A/goose/Hong Kong/23/1978 (A/H5N3) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI113294 A/chicken/Guangxi/1951/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI113198 A/duck/Guangxi/4665/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI113196 A/duck/Guangxi/4196/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI113194 A/duck/Guangxi/4184/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI113036 A/duck/Guangxi/89/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI110472 A/Philippines/344/2004 (A/H1N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI106024 A/China/GD01/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI99878 A/duck/Denmark/65047/04 (A/H5N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI89650 A/red-necked stint/Australia/5745/1981 (A/H12N9) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI89622 A/red-necked stint/Australia/4189/1980 (A/H4N8) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI89497 A/duck/Hong Kong/562/1979 (A/H10N9) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI89345 A/goose/Hong Kong/23/1978 (A/H5N3) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI89328 A/duck/Hong Kong/342/1978 (A/H5N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI89033 A/Quail/Nanchang/7-026/2000 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI89016 A/Chicken/Nanchang/7-010/2000 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI76504 A/red-necked stint/Western Australia/4923/1983 (A/H3N8) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI58650 A/turkey/Egypt/2253-2/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI58631 A/chicken/Egypt/2253-1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16130 A/Chicken/Nanchang/7-010/2000 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16128 A/Duck/Nanchang/9-091/2000 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16126 A/Chicken/Nanchang/1-020/2001 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16124 A/Quail/Nanchang/2-040/2001 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16122 A/Duck/Nanchang/2-182/2001 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16120 A/Duck/Nanchang/1-181/2001 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16116 A/Quail/Nanchang/3-140/2001 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16108 A/Duck/Nanchang/9-385/2000 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16062 A/chicken/Nanchang/3-201/01 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16058 A/Chicken/Nanchang/1-101/2001 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16054 A/Quail/Nanchang/10-028/2000 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16050 A/Duck/Nanchang/1-100/2001 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16048 A/Chicken/Nanchang/2-120/2001 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16042 A/Chicken/Nanchang/12-301/2000 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16028 A/Quail/Nanchang/7-026/2000 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16026 A/Duck/Nanchang/1-161/2001 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16022 A/Chicken/Nanchang/9-220/2000 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16020 A/Duck/Nanchang/8-198/2000 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16018 A/Pigeon/Nanchang/11-045/2000 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI16016 A/Pigeon/Nanchang/8-142/2000 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)

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niman

Post subject: Re: Egypt H5N1 Links to China H5N1 & US H1N1v H3N2v

Posted: Fri Jan 13, 2012 11:29 am

Joined: Wed Aug 19, 2009 10:42 am
Posts: 27367
Location: Pittsburgh, PA USA

T384C
EPI347460 A/Guangdong-Shenzhen/1/2011(H5N1) (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345613 A/goose/Eastern China/17/2010 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345605 A/duck/Eastern China/3/2009 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345604 A/duck/Eastern China/4/2009 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345603 A/duck/Eastern China/5/2009 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345602 A/duck/Eastern China/6/2009 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345601 A/duck/Eastern China/7/2009 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345600 A/duck/Eastern China/8/2009 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345599 A/duck/Eastern China/9/2009 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345598 A/duck/Eastern China/10/2009 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345597 A/duck/Eastern China/11/2009 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345596 A/duck/Eastern China/13/2010 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345595 A/duck/Eastern China/14/2010 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345594 A/duck/Eastern China/16/2010 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345590 A/duck/Eastern China/38/2007 (A/H6N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345589 A/duck/Eastern China/39/2007 (A/H6N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345588 A/duck/Eastern China/40/2007 (A/H6N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345587 A/duck/Eastern China/41/2007 (A/H6N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345586 A/duck/Eastern China/46/2008 (A/H6N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI345585 A/duck/Eastern China/47/2008 (A/H6N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342906 A/Texas/WRAIR1053P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342898 A/Japan/WRAIR1054P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342890 A/Oklahoma/WRAIR1110P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342858 A/Kuwait/WRAIR1119P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342850 A/Japan/WRAIR1226P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342842 A/Illinois/WRAIR1233P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342834 A/Alabama/WRAIR1235P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342826 A/Washington/WRAIR1237P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342818 A/South Korea/WRAIR1238P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342810 A/Nevada/WRAIR1257P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342802 A/Medellin/WRAIR1297P/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342778 A/Piura/WRAIR1700P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342770 A/Trujillo/WRAIR1701P/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342762 A/Trujillo/WRAIR1702P/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342754 A/Pucallpa/WRAIR1704P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342738 A/Sullana/WRAIR1707P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342730 A/Piura/WRAIR1708P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342722 A/Pucallpa/WRAIR1709P/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342714 A/Maracay/WRAIR1729P/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342675 A/Cusco/WRAIR1730P/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI342667 A/Philippines/WRAIR1736P/2006 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI341761 A/mallard/Sanjiang/90/2007 (A/H3N8) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337940 A/Guangxi/1/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337325 A/water/Hunan/7/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337317 A/water/Hunan/3/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337294 A/environment/Guizhou/9/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337286 A/environment/Guizhou/7/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337278 A/environment/Guizhou/4/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337270 A/environment/Guizhou/2/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337262 A/duck feces/Hebei/5/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337254 A/water/Hebei/3/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337246 A/water/Hebei/2/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337238 A/water/Hebei/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337230 A/Hubei/1/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337223 A/Hunan/2/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337216 A/Guangxi/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337209 A/Guizhou/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337195 A/Hunan/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337188 A/Shandong/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337181 A/Beijing/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337174 A/Guangdong/1/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337167 A/Guangxi/1/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337153 A/Anhui/1/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337147 A/Fujian/1/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337127 A/Guangdong/2/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337120 A/Sichuan/3/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337113 A/Hubei/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337094 A/Zhejiang/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337088 A/Hunan/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337082 A/Sichuan/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337075 A/Sichuan/2/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337063 A/Anhui/2/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337058 A/Anhui/1/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337051 A/chicken/Hubei/01-MA01/1999 (A/H9N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI337044 A/chicken/Hubei/01/1999 (A/H9N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI336995 A/duck/Zhejiang/2248/2011 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI336993 A/duck/Zhejiang/2244/2011 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI336992 A/duck/Zhejiang/2243/2011 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI336991 A/duck/Zhejiang/2242/2011 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI336990 A/duck/Zhejiang/224/2011 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI336989 A/duck/Zhejiang/213/2011 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI336734 A/duck/Malaysia/2001 (A/H9N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI336093 A/Mexico/UASLP-005/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI336085 A/Mexico/UASLP-006/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI336078 A/Mexico/UASLP-007/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI336067 A/Mexico/UASLP-008/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI336060 A/Mexico/UASLP-009/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335972 A/teal/Chany/7119/2008 (A/H15N4) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335453 A/New York/08-1253/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335445 A/New York/08-1326/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335241 A/chicken/Lao/LH1/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335229 A/duck/Lao/6/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335221 A/duck/Lao/7/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335213 A/duck/Lao/9/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335172 A/duck/Lao/670/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335164 A/duck/Lao/959/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335156 A/duck/Lao/961/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335148 A/duck/Lao/962/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335140 A/environment/Lao/964/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335126 A/duck/Lao/975/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335110 A/environment/Lao/979/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335102 A/duck/Lao/980/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335094 A/duck/Lao/981/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335086 A/duck/Lao/986/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI335078 A/duck/Lao/987/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI333289 A/Moscow/WRAIR4316N/2011 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI333281 A/Moscow/WRAIR4316T/2011 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI328895 A/duck/Eastern China/909/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI328887 A/duck/Eastern China/108/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI328879 A/duck/Eastern China/031/2009 (A/H5N5) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI327565 A/silver gull/Tasmania/062/2006 (A/H13N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI327347 A/turkey/Italy/1067/1999 (A/H7N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI327340 A/chicken/Italy/1391/1999 (A/H7N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI326824 A/environment/Korea/CSM3/2002 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI326821 A/environment/Korea/ESD11/2003 (A/H3N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI326813 A/duck/Korea/JS49/2004 (A/H3N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI326812 A/duck/Korea/JS53/2004 (A/H3N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI326810 A/duck/Korea/U1-5/2007 (A/H3N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI326018 A/Boston/47/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325542 A/Taiwan/192/2006 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325541 A/Taiwan/6723/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325539 A/Taiwan/6566/2006 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325538 A/Taiwan/5857/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325535 A/Taiwan/2832/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325534 A/Taiwan/5505/2006 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325533 A/Taiwan/2900/2006 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325532 A/Taiwan/1026/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325531 A/Taiwan/11526/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325530 A/Taiwan/10103/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325529 A/Taiwan/8885/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325528 A/Taiwan/3293/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325527 A/Taiwan/2885/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325526 A/Taiwan/2823/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325525 A/Taiwan/0258/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325522 A/Taiwan/0045/2006 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325521 A/Taiwan/0586/2006 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325520 A/Taiwan/8949/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325519 A/Taiwan/5858/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI325518 A/Taiwan/10393/2005 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI324385 A/California/VRDL395/2009 (A/H0) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI324352 A/California/VRDL179/2009 (A/H0) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI321565 A/duck/Shimane/188/1999 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI320394 A/California/VRDL191/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI320386 A/California/VRDL190/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI318046 A/Taiwan/1/1986 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI318045 A/Taiwan/1/1986 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI318044 A/Taiwan/1/1986 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI318043 A/Taiwan/1/1986 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI318042 A/Taiwan/1/1986 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI318041 A/Taiwan/1/1986 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI318040 A/Taiwan/1/1986 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI318039 A/Taiwan/1/1986 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI318038 A/Taiwan/1/1986 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI318037 A/Taiwan/1/1986 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI318036 A/Taiwan/1/1986 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI318035 A/Taiwan/1/1986 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI316594 A/Boston/32/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI316570 A/Boston/87/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI316546 A/spot-billed duck/Korea/KNU SYG06/2006 (A/H5N3) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI316532 A/Boston/79/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI316515 A/Boston/19/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI316504 A/duck/Hubei/126/1985 (A/H7N8) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315400 A/Boston/94/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315392 A/Boston/82/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315384 A/Boston/81/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315376 A/Boston/78/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315368 A/Boston/77/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315360 A/Boston/74/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315352 A/Boston/70/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315344 A/Boston/61/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315336 A/Boston/59/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315328 A/Boston/54/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315320 A/Boston/50/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315312 A/Boston/46/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315304 A/Boston/44/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315296 A/Boston/25/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315288 A/Boston/23/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315280 A/Boston/22/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315272 A/Boston/10/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315264 A/Boston/6/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315114 A/duck/Vietnam/G12/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI315099 A/mallard/PT/27972-B139/2007 (A/H9N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI314286 A/turkey/Almaty/535/2004 (A/H11N9) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI314278 A/duck/Taiwan/0648/2006 (A/H4N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI314238 A/wild duck/Taiwan/WB306/2002 (A/H4N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI314222 A/wild duck/Taiwan/WB2/1998 (A/H4N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI314214 A/wild duck/Taiwan/WB147/2001 (A/H4N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI314130 A/herring gull/Atyrau/2186/2007 (A/H11N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI313946 A/duck/Taiwan/3353/2007 (A/H4N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI313930 A/duck/Taiwan/0720/2006 (A/H4N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI313184 A/Fort Monmouth/1-MA/1947 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI313124 A/Boston/2/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI310972 A/swine/Hong Kong/681/1993 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI310956 A/swine/Hong Kong/644/1993 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI309099 A/spur-winged goose/Nigeria/226/2008 (A/H5N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI309098 A/spur-winged goose/Nigeria/210/2008 (A/H5N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI309097 A/spur-winged goose/Nigeria/2/2008 (A/H5N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI308937 A/Taiwan/141/2002 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306111 A/Boston/95/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306095 A/Boston/92/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306087 A/Boston/91/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306079 A/Boston/89/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306071 A/Boston/88/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306063 A/Boston/86/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306055 A/Boston/85/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306047 A/Boston/84/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306039 A/Boston/83/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306031 A/Boston/80/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306023 A/Boston/76/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306015 A/Boston/72/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI306007 A/Boston/71/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305999 A/Boston/68/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305991 A/Boston/67/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305983 A/Boston/66/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305975 A/Boston/65/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305967 A/Boston/64/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305959 A/Boston/63/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305951 A/Boston/62/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305943 A/Boston/60/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305935 A/Boston/58/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305927 A/Boston/52/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305919 A/Boston/51/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305911 A/Boston/49/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305903 A/Boston/48/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305895 A/Boston/45/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305887 A/Boston/43/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305879 A/Boston/42/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305871 A/Boston/41/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305863 A/Boston/4/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305855 A/Boston/39/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305847 A/Boston/38/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305839 A/Boston/37/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305831 A/Boston/36/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305823 A/Boston/35/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305815 A/Boston/33/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305807 A/Boston/30/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305799 A/Boston/3/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305791 A/Boston/28/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305778 A/Boston/27/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305770 A/Boston/26/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305762 A/Boston/24/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305754 A/Boston/21/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305746 A/Boston/20/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305737 A/Boston/18/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305729 A/Boston/17/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305713 A/Boston/14/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305705 A/Boston/13/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305697 A/Boston/11/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305689 A/Boston/100/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI305681 A/Boston/1/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI301619 A/chicken/Iran/10VIR854-1/2002 (A/H9N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI301540 A/quail/Saudi Arabia/08vir3489-46-as104/2006 (A/H9N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI300950 A/duck/Korea/SH0912/2009 (A/H9N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI300732 A/swine/Shandong/fNY/2003 (A/H9N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI297866 A/Liverpool/1951 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI297749 A/Netherlands/002W1/1953 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI297725 A/Netherlands/001R1/1953 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI297702 A/Netherlands/001H1/1954 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI296629 A/mallard/Sweden/95/2005 (A/H7N7) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI296621 A/black-headed gull/Sweden/1/2005 (A/H13N8) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI296613 A/mallard/Sweden/90/2005 (A/H11N9) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI296581 A/herring gull/Netherlands/4/2006 (A/H10N4) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI296557 A/dunlin/Sweden/1/2005 (A/H4N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI296518 A/mallard/Netherlands/65/2006 (A/H5N3) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI296502 A/mallard/Netherlands/7/2007 (A/H4N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI296140 A/swine/Fujian/0325/2008 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI295806 A/swine/Shandong/8/2003 (A/H9N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294664 A/chicken/Egypt/3982-78/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294643 A/chicken/Egypt/3982-52/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294636 A/chicken/Egypt/3982-50/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294622 A/chicken/Egypt/3982-43/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294615 A/duck/Egypt/3982-21/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294594 A/chicken/Egypt/3982-14/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294587 A/chicken/Egypt/3982-13/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294559 A/chicken/Egypt/3982-4/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294552 A/chicken/Egypt/3982-3/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294538 A/chicken/Egypt/2095-75/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294531 A/chicken/Egypt/2095-70/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294524 A/chicken/Egypt/2095-68/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294517 A/chicken/Egypt/2095-65/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294508 A/chicken/Egypt/2095-39/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294494 A/chicken/Egypt/1553-26/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294487 A/chicken/Egypt/1553-15/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI294473 A/chicken/Egypt/1553-6/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI293780 A/Liaoning-Zhenxing/1686/2010 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI293772 A/Liaoning-Zhenxing/1109/2010 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI293748 A/Liaoning-Donggang/120/2010 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI286514 A/muscovy duck/Thai Binh/07-90/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI286513 A/muscovy duck/Nam Dinh/07-87/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI286512 A/muscovy duck/Son La/07-85/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI286511 A/muscovy duck/Ha Nam/07-84/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI286510 A/muscovy duck/Bac Gieng/07-66/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI286509 A/muscovy duck/Ha Nam/07-47/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI286508 A/muscovy duck/Bac Ninh/07-69/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285964 A/duck/Nam Dinh/07-91/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285962 A/chicken/Thai Binh/07-89/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285961 A/duck/Nam Dinh/07-88/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285959 A/duck/Thai Ninh/07-86/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285956 A/chicken/Ha Nam/07-83/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285955 A/chicken/Bac Giang/07-74/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285954 A/duck/Ninh Binh/07-68/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285952 A/duck/Mong Cai/07-58/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285951 A/duck/Nam Dinh/07-55/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285950 A/duck/Ha Tinh/07-53/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285949 A/duck/Nghe An/07-49/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285948 A/duck/Phu Tho/07-48/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285946 A/chicken/Cao Bang/07-42/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285945 A/duck/Hai Duong/07-40/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285939 A/avian/Hong Kong/1993/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285938 A/avian/Hong Kong/2372/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285937 A/avian/Hong Kong/0828/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285936 A/avian/Hong Kong/0719/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285935 A/avian/Hong Kong/2065/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285215 A/California/VRDL358/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285175 A/California/VRDL324/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285167 A/California/VRDL320/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285159 A/California/VRDL311/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285143 A/California/VRDL289/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285127 A/California/VRDL281/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285119 A/California/VRDL258/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285116 A/California/VRDL232/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285100 A/California/VRDL301/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285092 A/California/VRDL300/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285084 A/California/VRDL298/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285076 A/California/VRDL297/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285068 A/California/VRDL295/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285060 A/California/VRDL292/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285052 A/California/VRDL290/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285044 A/California/VRDL283/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285036 A/California/VRDL280/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI285020 A/California/VRDL275/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284991 A/California/VRDL256/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284983 A/California/VRDL254/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284975 A/California/VRDL252/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284967 A/California/VRDL251/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284959 A/California/VRDL249/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284951 A/California/VRDL245/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284943 A/California/VRDL244/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284935 A/California/VRDL239/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284927 A/California/VRDL238/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284911 A/California/VRDL236/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284903 A/California/VRDL235/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284871 A/California/VRDL224/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284855 A/California/VRDL222/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284852 A/California/VRDL200/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284828 A/California/VRDL220/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284820 A/California/VRDL219/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284812 A/California/VRDL218/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284804 A/California/VRDL217/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284796 A/California/VRDL215/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284788 A/California/VRDL213/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284780 A/California/VRDL209/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284772 A/California/VRDL206/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284764 A/California/VRDL202/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284756 A/California/VRDL193/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284748 A/California/VRDL192/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284724 A/California/VRDL180/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284711 A/California/VRDL380/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284703 A/California/VRDL379/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284695 A/California/VRDL378/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284692 A/California/VRDL377/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284684 A/California/VRDL369/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284660 A/California/VRDL194/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284636 A/California/VRDL366/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI284399 A/mallard/Czech Republic/12652/2007 (A/H4N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI283716 A/California/VRDL229/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI283692 A/California/VRDL163/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI283684 A/California/VRDL155/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI283676 A/California/VRDL154/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI283668 A/California/VRDL153/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI283660 A/California/VRDL152/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280276 A/water/Hunan/7/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280268 A/water/Hunan/3/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280244 A/environment/Guizhou/9/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280236 A/environment/Guizhou/7/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280228 A/environment/Guizhou/4/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280212 A/duck feces/Hebei/5/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280204 A/water/Hebei/3/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280196 A/water/Hebei/2/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280188 A/water/Hebei/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280172 A/Hunan/2/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280164 A/Hunan/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280156 A/Beijing/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280148 A/Jiangsu/2/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280140 A/Jiangsu/1/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280132 A/Fujian/1/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280116 A/Hubei/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280092 A/Hunan/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280084 A/Guangxi/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280077 A/Guizhou/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280063 A/Shandong/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280056 A/Guangdong/1/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280049 A/Guangxi/1/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280035 A/Anhui/1/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280021 A/Guangdong/2/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI280014 A/Sichuan/3/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI279945 A/Zhejiang/1/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI277057 A/California/VRDL149/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276781 A/Peru/WRAIR1509P/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276765 A/Peru/WRAIR1505P/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276749 A/Peru/WRAIR1377P/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276741 A/Peru/WRAIR1376P/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276733 A/Peru/WRAIR1311P/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276725 A/Peru/WRAIR1310P/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276717 A/Peru/WRAIR1300P/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276709 A/Peru/WRAIR1299P/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276701 A/Peru/WRAIR1298P/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276693 A/Peru/WRAIR1296P/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276685 A/Peru/WRAIR1295P/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276259 A/chicken/Egypt/9402-CLEVB213/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276069 A/shrike/Tibet/13/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276045 A/goose/Hubei/65/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276029 A/duck/Yunnan/47/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI276021 A/duck/Jiangxi/80/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275997 A/duck/Hunan/29/2006 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275989 A/duck/Hunan/11/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275981 A/duck/Hubei/49/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275957 A/duck/Anhui/1/06 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275877 A/chicken/Tibet/6/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275869 A/chicken/Sichuan/81/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275837 A/chicken/Shandong/A-1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275773 A/chicken/Hunan/21/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275765 A/chicken/Hunan/1/2009 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275741 A/chicken/Guizhou/7/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275725 A/chicken/Fujian/1/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275685 A/Washington/WRAIR1126P/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275629 A/Texas/WRAIR1254P/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275621 A/Texas/WRAIR1052P/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275605 A/South Dakota/WRAIR1113P/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275589 A/South Carolina/WRAIR1112P/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275565 A/New Jersey/WRAIR1120P/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275549 A/Nebraska/WRAIR1247P/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275541 A/Louisiana/WRAIR1170P/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275501 A/Japan/WRAIR1230P/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275461 A/Guangxi/1/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275417 A/California/WRAIR1243P/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275409 A/Bogota/WRAIR0088N/2009 (A/H1N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275401 A/Arkansas/WRAIR1249P/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275385 A/Anhui/2/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275377 A/Anhui/1/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI275354 A/Alaska/WRAIR1114P/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI272782 A/mallard/PT/35910-2/2006 (A/H4N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI272776 A/duck/Denmark/53-147-8/2008 (A/H7N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI272287 A/wild bird/Korea/L60-2/2008 (A/H5N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI270267 A/Vietnam/HN31432M/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI270259 A/Vietnam/UT31413II/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI270251 A/Vietnam/UT31412II/2008 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI270235 A/Vietnam/HN31388M1/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI270227 A/Vietnam/UT31312II/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI270219 A/Vietnam/UT31244III/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI270211 A/Vietnam/UT31244II/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI270203 A/Vietnam/UT31239/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI270195 A/Vietnam/UT31203A/2007 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI270187 A/Vietnam/UT30850/2005 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI268981 A/duck/Hunan/1469/2002 (A/H6N8) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI268966 A/duck/Fujian/12035/2005 (A/H6N6) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI268959 A/duck/Guangxi/585/2005 (A/H6N5) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI268875 A/mallard/Jiangxi/7376/2003 (A/H6N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI268864 A/mallard/Jiangxi/8264/2004 (A/H6N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI268816 A/mallard/Jiangxi/10071/2005 (A/H6N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI268815 A/mallard/Jiangxi/10668/2005 (A/H6N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI268814 A/mallard/Jiangxi/13228/2005 (A/H6N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI267847 A/Brisbane/59/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI267839 A/Sydney/142/2007 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI267163 A/California/VRDL135/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI267139 A/California/VRDL146/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI267107 A/California/VRDL141/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI267099 A/California/VRDL140/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI267068 A/mallard/Sweden/55/2002 (A/H11N2) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI267028 A/Hubei/1/2010 (A/H5N1) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266941 A/Hong Kong/33775/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266938 A/Sichuan-Dongqu/1836/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266933 A/Zhejiang-Liandu/1339/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266928 A/West Virginia/02/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266923 A/Vietnam/2036/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266918 A/Texas/57/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266913 A/Texas/38/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266908 A/Sichuan-Xiqu/325/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266903 A/Liaoning-Huanggu/1144/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266893 A/Kentucky/08/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266888 A/Jiangsu-Quanshan/377/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266883 A/Hunan-Changning/52/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266878 A/Hong Kong/4508/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266873 A/Hong Kong/4458/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266868 A/Hong Kong/33774/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266863 A/Hong Kong/33773/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266858 A/Hong Kong/26552/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266853 A/Hong Kong/26547/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266848 A/Hong Kong/14775/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266843 A/Guangdong-Zhuangzuyaozuzizhi/51/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266838 A/Fujian-Shanghang/523/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266835 A/Fujian-Gulou/1896/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266832 A/Fujian-Gulou/1581/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266827 A/Beijing-Chaoyang/1792/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266822 A/Beijing-Chaoyang/11263/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266817 A/Beijing-Chaoyang/11230/2009 (A/H1N1 seasonal) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266784 A/chicken/Chakwal/NARC-148/2004 (A/H7N3) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266782 A/chicken/Chakwal/NARC-46/2003 (A/H7N3) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266781 A/chicken/Karachi/NARC-23/2003 (A/H7N3) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)
EPI266780 A/chicken/Chakwal/NARC-35/2001 (A/H7N3) segment 3 (PA) 27.0 7.428676e+00 14/14 (100%)

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