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LOCUS HQ833568 1407 bp cRNA linear VRL 01-DEC-2011
DEFINITION Influenza A virus (A/swine/Ohio/FAH10-1/2010(H1N2)) segment 6
neuraminidase (NA) gene, partial cds.
ACCESSION HQ833568
VERSION HQ833568.1 GI:317016653
KEYWORDS .
SOURCE Influenza A virus (A/swine/Ohio/FAH10-1/2010(H1N2))
ORGANISM Influenza A virus (A/swine/Ohio/FAH10-1/2010(H1N2))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 1407)
AUTHORS Ali,A., Khatri,M., Wang,L., Saif,Y.M. and Lee,C.-W.
TITLE Novel Swine and Human H1N2 Influenza Virus Reassortant isolated
from Pigs, U.S.
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1407)
AUTHORS Ali,A., Khatri,M., Wang,L., Saif,Y.M. and Lee,C.-W.
TITLE Direct Submission
JOURNAL Submitted (28-DEC-2010) Food Animal Health Research Program, The
Ohio State University, 1680 Madison Ave, Wooster, OH 44691, USA
COMMENT GenBank Accession Numbers HQ833563-HQ833570 represent sequences
from the 8 segments of Influenza A virus
(A/swine/Ohio/FAH10-1/2010(H1N2)).
FEATURES Location/Qualifiers
source 1..1407
/organism="Influenza A virus
(A/swine/Ohio/FAH10-1/2010(H1N2))"
/mol_type="viral cRNA"
/strain="A/swine/Ohio/FAH10-1/2010"
/serotype="H1N2"
/host="swine"
/db_xref="taxon:941428"
/segment="6"
/country="USA: Ohio"
/collection_date="01-Oct-2010"
gene 1..>1407
/gene="NA"
CDS 1..>1407
/gene="NA"
/codon_start=1
/product="neuraminidase"
/protein_id="ADU85902.1"
/db_xref="GI:317016654"
/translation="MNPNQKIITIGSVSLIIATICFLMQIAILVTTVTLHFKQHDYNS
PPNNQAMLCEPTIIERNTTEIVYLTNTTIEKEICPKLAEYRNWSKPQCNITGFAPFSK
DNSIRLSAGGDIWVTREPYVSCDPDKCYQFALGQGTTLNNGHSNNTVHDRTPYRTLLM
NELGVPFHLGTRQVCMAWSSSSCHDGKAWLHVCVTGNDNNATASFIYNGRLVDSIGSW
SKNILRTQESECVCINGTCTVVMTDGSASGKADTKILFVEEGKIVHISTLSGSAQHVE
ECSCYPRFPGVRCVCRDNWKGSNRPIVDINVKNYSIVSSYVCSGLVGDTPRKSDSVSS
SYCLDPNNEKGGHGVKGWAFDDGNDVWMGRTINETLRLGYETFKVIEGWSKANSKLQT
NRQVIVEKGDRSGYSGIFSVEGKSCINRCFYVELIRGRKEETKVWWTSNSIVVFCGTS
GTYGTGSWPDGADINLMPI"
ORIGIN
1 atgaatccaa atcaaaagat aataacaatt ggctctgttt ctctcatcat tgccacaata
61 tgtttcctta tgcaaattgc tatcctagta actactgtaa cgttacattt caagcagcat
121 gactacaact cccccccaaa caaccaagca atgctgtgtg aaccaacaat aatagaaaga
181 aacacaacag agattgtgta tttgaccaac accaccatag agaaagaaat atgccccaaa
241 ctagcagaat atagaaactg gtcaaagccg caatgtaaca ttacaggatt tgcacctttt
301 tctaaggaca attcaattcg gctttctgct ggtggggaca tctgggtgac aagagaaccc
361 tatgtgtcat gcgatcctga caagtgttat caatttgccc ttgggcaggg aacaacatta
421 aacaacggac attcaaataa cactgtacat gataggaccc cttatcgaac cctattgatg
481 aatgaattgg gtgttccatt tcatttagga accaggcaag tgtgcatggc atggtccagc
541 tcaagttgtc acgatggaaa agcatggctg catgtttgtg taactgggaa tgataacaat
601 gcaacagcta gcttcattta caatgggagg cttgtagata gtattggttc atggtccaaa
661 aatatactca gaacccagga gtcggaatgc gtctgtatca atggaacctg tacagtagta
721 atgactgatg ggagcgcttc aggaaaagct gatactaaaa tactattcgt tgaggagggg
781 aagatcgttc atattagcac attgtcagga agtgctcagc atgttgagga gtgctcctgt
841 tatcctcgat ttcctggtgt cagatgtgtc tgcagagaca actggaaagg ctccaatagg
901 cccatcgtag atataaatgt aaagaattat agcattgttt ccagttatgt atgctcagga
961 cttgttggag acacacccag aaaaagcgac agcgtcagca gtagttattg cctagatcct
1021 aacaatgaga aaggtggtca tggggtgaaa ggctgggcct ttgatgatgg aaatgacgtg
1081 tggatgggaa ggacaatcaa cgagacgtta cgcttaggtt atgaaacctt caaagtcatt
1141 gaaggctggt ccaaagctaa ctccaaatta cagacaaata ggcaagtcat agttgaaaaa
1201 ggtgacaggt ccggttattc tggtattttc tccgttgaag gtaaaagctg catcaatcgg
1261 tgcttttatg tggagttgat aaggggaagg aaagaggaaa ctaaagtctg gtggacctca
1321 aacagtattg ttgtgttttg tggcacctca ggtacatatg gaacaggctc atggcctgat
1381 ggagcggata tcaatctcat gcctata
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