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PostPosted: Fri Dec 23, 2011 12:19 pm 
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Location: Pittsburgh, PA USA
Sequences from the contact to West Virginia/06/2011 have been released by CDC at GISAID.

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PostPosted: Fri Dec 23, 2011 12:24 pm 
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Location: Pittsburgh, PA USA
A/West Virginia/07/2011 3M collected Dec 7

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PostPosted: Fri Dec 23, 2011 12:31 pm 
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Location: Pittsburgh, PA USA
N2 close to WV/06/11

EPI346492 A/West Virginia/06/2011 (A/H3N2) segment 6 (NA) 1393.5 0.000000e+00 758/760 (99%)
EPI324814 A/swine/Minnesota/A01049346/2010 (A/H3N2) segment 6 (NA) 1315.9 0.000000e+00 744/760 (97%)
EPI324813 A/swine/Iowa/A01049317/2010 (A/H3N2) segment 6 (NA) 1315.9 0.000000e+00 745/761 (97%)
EPI314677 A/swine/QC/414/2009 (A/H3N2) segment 6 (NA) 1304.9 0.000000e+00 742/760 (97%)
EPI338575 A/swine/Minnesota/A01049936/2011 (A/H3N2) segment 6 (NA) 1293.8 0.000000e+00 741/761 (97%)
EPI317012 A/swine/Iowa/A01049032/2010 (A/H3N2) segment 6 (NA) 1271.6 0.000000e+00 737/761 (96%)
EPI317011 A/swine/Iowa/A01049031/2010 (A/H3N2) segment 6 (NA) 1271.6 0.000000e+00 737/761 (96%)
EPI337547 A/swine/Minnesota/00484/2005 (A/H3N2) segment 6 (NA) 1260.5 0.000000e+00 734/760 (96%)
EPI103176 A/swine/Manitoba/12707/2005 (A/H3N2) segment 6 (NA) 1260.5 0.000000e+00 734/760 (96%)
EPI103158 A/swine/British Columbia/28103/2005 (A/H3N2) segment 6 (NA) 1260.5 0.000000e+00 734/760 (96%)
EPI103140 A/swine/Alberta/14722/2005 (A/H3N2) segment 6 (NA) 1260.5 0.000000e+00 734/760 (96%)
EPI180131 A/swine/Manitoba/3716/2005 (A/H3N2) segment 6 (NA) 1258.7 0.000000e+00 733/760 (96%)
EPI337443 A/swine/Minnesota/00611/2005 (A/H3N2) segment 6 (NA) 1255.0 0.000000e+00 733/760 (96%)
EPI337351 A/swine/Minnesota/01146/2006 (A/H3N2) segment 6 (NA) 1255.0 0.000000e+00 733/760 (96%)
EPI314333 A/turkey/BC/1529-3/2005 (A/H3N2) segment 6 (NA) 1255.0 0.000000e+00 733/760 (96%)
EPI229374 A/turkey/OH/313053/2004 (A/H3N2) segment 6 (NA) 1255.0 0.000000e+00 733/760 (96%)
EPI101393 A/turkey/Ohio/313053/04 (A/H3N2) segment 6 (NA) 1255.0 0.000000e+00 733/760 (96%)
EPI337386 A/swine/Nebraska/00722/2005 (A/H0) segment 6 (NA) 1249.5 0.000000e+00 732/760 (96%)
EPI235273 A/swine/North Carolina/2003 (A/H3N2) segment 6 (NA) 1249.5 0.000000e+00 732/760 (96%)
EPI234828 A/New Mexico/17/2003 (A/H0N2) segment 6 (NA) 1249.5 0.000000e+00 732/760 (96%)
EPI228924 A/turkey/Illinois/2004 (A/H3N2) segment 6 (NA) 1249.5 0.000000e+00 732/760 (96%)
EPI227576 A/turkey/NC/353568/2005 (A/H3N2) segment 6 (NA) 1249.5 0.000000e+00 732/760 (96%)
EPI222962 A/swine/Minnesota/761/2007 (A/H3N2) segment 6 (NA) 1249.5 0.000000e+00 732/760 (96%)
EPI182818 A/swine/Quebec/4001/2005 (A/H3N2) segment 6 (NA) 1249.5 0.000000e+00 732/760 (96%)
EPI180129 A/swine/Illinois/34642/2005 (A/H3N2) segment 6 (NA) 1249.5 0.000000e+00 732/760 (96%)
EPI103212 A/turkey/Ontario/31232/2005 (A/H3N2) segment 6 (NA) 1249.5 0.000000e+00 732/760 (96%)
EPI337364 A/swine/Minnesota/00709/2005 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI320283 A/Missouri/NHRC0002/2004 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI314952 A/England/528/2003 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI291982 A/swine/Iowa/H03LDH5/2003 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI225757 A/swine/Minnesota/66960/2006 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 732/761 (96%)
EPI222956 A/swine/Minnesota/1300/2007 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI184450 A/swine/North Carolina/R08-001877-D08-013371/2008 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI180137 A/swine/Minnesota/6045/2005 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI139443 A/Denmark/205/2003 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI119281 A/Hamburg/1/04 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI103194 A/swine/Ontario/33853/2005 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI103122 A/Ontario/RV1273/2005 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI94606 A/Canterbury/429/2003 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI93257 A/Canterbury/443/2003 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI93048 A/Canterbury/431/2003 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI92497 A/Canterbury/386/2003 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI53244 A/New York/74/2002 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI35933 A/Dunedin/9/2002 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI20213 A/Denmark/19-2/03 (A/H3N2) segment 6 (NA) 1243.9 0.000000e+00 731/760 (96%)
EPI180133 A/swine/Minnesota/39274/2005 (A/H3N2) segment 6 (NA) 1240.2 0.000000e+00 730/760 (96%)
EPI337952 A/swine/Illinois/02450/2008 (A/H0) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI320311 A/Australia/NHRC0005/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI319018 A/California/NHRC0006/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI318858 A/Australia/NHRC0002/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI318850 A/Australia/NHRC0003/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI318842 A/Australia/NHRC0006/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI318834 A/Australia/NHRC0008/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI318826 A/Australia/NHRC0009/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI318762 A/Australia/NHRC0010/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI318746 A/Australia/NHRC0004/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI318738 A/Australia/NHRC0001/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI314949 A/Scotland/50/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI234853 A/New York/3/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI234830 A/New Mexico/23/2003 (A/H0N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI234764 A/Ind/M/Enc/1/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI180138 A/swine/Minnesota/8330/2005 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI180132 A/swine/Minnesota/3156/2005 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI180123 A/swine/Minnesota/5317/2005 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI168652 A/turkey/North Carolina/353568/2005 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139442 A/Denmark/103/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139425 A/Denmark/78/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139419 A/Denmark/120/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139418 A/Denmark/64/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139405 A/Denmark/13/2004 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139377 A/Denmark/128/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139364 A/Denmark/104/2004 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139359 A/Denmark/106/2004 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139345 A/Denmark/113/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139342 A/Denmark/82/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139328 A/Denmark/100/2004 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139327 A/Denmark/84/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139317 A/Denmark/6/2002 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139316 A/Denmark/5/2002 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139315 A/Denmark/4/2002 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139308 A/Denmark/24/2002 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139306 A/Denmark/02/2002 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI139304 A/Denmark/01/2002 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI119287 A/Sachsen/4/04 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98940 A/Finland/465/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98938 A/Finland/455/2004 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98936 A/Finland/453/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98934 A/Finland/435/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98932 A/Finland/434/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98930 A/Finland/433/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98928 A/Finland/432/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98926 A/Finland/431/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98924 A/Finland/430/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98920 A/Finland/402/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98918 A/Finland/377/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98914 A/Finland/342/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98910 A/Finland/323/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98908 A/Finland/320/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI98906 A/Finland/319/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)
EPI96281 A/Canterbury/425/2003 (A/H3N2) segment 6 (NA) 1238.4 0.000000e+00 730/760 (96%)

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PostPosted: Fri Dec 23, 2011 12:32 pm 
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Posts: 56044
Location: Pittsburgh, PA USA
A(H3N2)v : Human case of H3N2 SOIV - with an M gene from 2009 H1N1 Pandemic virus

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PostPosted: Fri Dec 23, 2011 12:33 pm 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
HA identical

EPI346493 A/West Virginia/06/2011 (A/H3N2) segment 4 (HA) 425.8 4.201446e-118 230/230 (100%)
EPI346440 A/Iowa/08/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI346432 A/Iowa/07/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI346424 A/Iowa/09/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI344405 A/Indiana/08/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI344397 A/Indiana/10/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI344389 A/Indiana/10/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI342704 A/Iowa/09/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI342696 A/Iowa/08/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI342688 A/Iowa/07/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI342603 A/swine/NY/A01104005/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI340984 A/Indiana/10/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI339171 A/Maine/06/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI338421 A/swine/Indiana/A01049653/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI335629 A/Indiana/08/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI333152 A/Indiana/08/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI328900 A/Minnesota/11/2010 X-203A (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI328898 A/Minnesota/11/2010 X-203 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI324857 A/swine/North Carolina/A01049436/2011 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI317003 A/swine/Indiana/A0109091/2010 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI312980 A/Pennsylvania/40/2010 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI293965 A/Minnesota/11/2010 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI291898 A/Wisconsin/12/2010 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI291893 A/Wisconsin/12/2010 (A/H3N2) segment 4 (HA) 420.3 1.954743e-116 229/230 (99%)
EPI338562 A/swine/Indiana/A01049744/2011 (A/H3N2) segment 4 (HA) 414.8 9.094534e-115 228/230 (99%)
EPI338561 A/swine/Indiana/A01049745/2011 (A/H3N2) segment 4 (HA) 414.8 9.094534e-115 228/230 (99%)
EPI335610 A/Pennsylvania/09/2011 (A/H3N2) segment 4 (HA) 414.8 9.094534e-115 228/230 (99%)
EPI340976 A/Maine/07/2011 (A/H3N2) segment 4 (HA) 412.9 3.270976e-114 227/229 (99%)
EPI291838 A/Minnesota/09/2010 (A/H3N2) segment 4 (HA) 409.2 4.231275e-113 227/230 (98%)
EPI335618 A/Pennsylvania/11/2011 (A/H3N2) segment 4 (HA) 405.5 5.473500e-112 223/225 (99%)
EPI335623 A/Pennsylvania/10/2011 (A/H3N2) segment 4 (HA) 387.1 1.982597e-106 213/215 (99%)
EPI33876 A/New York/599/1996 (A/H3N2) segment 4 (HA) 372.3 5.551495e-102 220/229 (96%)
EPI32653 A/New York/572/1996 (A/H3N2) segment 4 (HA) 372.3 5.551495e-102 220/229 (96%)
EPI31418 A/New York/600/1996 (A/H3N2) segment 4 (HA) 372.3 5.551495e-102 220/229 (96%)
EPI31361 A/New York/594/1996 (A/H3N2) segment 4 (HA) 372.3 5.551495e-102 220/229 (96%)
EPI30506 A/New York/580/1996 (A/H3N2) segment 4 (HA) 372.3 5.551495e-102 220/229 (96%)
EPI30487 A/New York/576/1997 (A/H3N2) segment 4 (HA) 372.3 5.551495e-102 220/229 (96%)
EPI30468 A/New York/574/1996 (A/H3N2) segment 4 (HA) 372.3 5.551495e-102 220/229 (96%)
EPI30127 A/New York/583/1997 (A/H3N2) segment 4 (HA) 372.3 5.551495e-102 220/229 (96%)
EPI30089 A/New York/575/1996 (A/H3N2) segment 4 (HA) 372.3 5.551495e-102 220/229 (96%)
EPI30013 A/New York/565/1996 (A/H3N2) segment 4 (HA) 372.3 5.551495e-102 220/229 (96%)
EPI29994 A/New York/564/1997 (A/H3N2) segment 4 (HA) 372.3 5.551495e-102 220/229 (96%)
EPI29975 A/New York/560/1997 (A/H3N2) segment 4 (HA) 372.3 5.551495e-102 220/229 (96%)
EPI337441 A/swine/Minnesota/00611/2005 (A/H3N2) segment 4 (HA) 370.5 1.996673e-101 221/231 (95%)
EPI312689 A/swine/Minnesota/239105/2009 (A/H3N2) segment 4 (HA) 370.5 1.996673e-101 220/230 (95%)
EPI235271 A/swine/North Carolina/2003 (A/H3N2) segment 4 (HA) 370.5 1.996673e-101 221/231 (95%)
EPI222910 A/swine/Minnesota/7931/2007 (A/H3N2) segment 4 (HA) 370.5 1.996673e-101 222/232 (95%)
EPI98712 A/swine/MI/PU243/04 (A/H3N1) segment 4 (HA) 370.5 1.996673e-101 221/231 (95%)
EPI24166 A/Netherlands/91/96 (A/H3N2) segment 4 (HA) 370.5 1.996673e-101 221/231 (95%)
EPI8292 A/Athens/76/98 (A/H3N2) segment 4 (HA) 370.5 1.996673e-101 220/230 (95%)
EPI292013 A/swine/Iowa/H03HB4/2003 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI161141 A/Hong Kong/CUHK4147/1997 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI106532 A/Oslo/99/97 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI91694 A/New York/541/1998 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI91428 A/New York/518/1998 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI30582 A/New York/587/1996 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI30525 A/New York/581/1997 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI30430 A/New York/566/1997 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI30108 A/New York/579/1997 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI8701 A/Paris/906/97 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI8699 A/Paris/896/97 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI8294 A/Athens/94/98 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI8007 A/Swine/Wisconsin/14094/99 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI8005 A/Swine/Oklahoma/18089/99 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI8001 A/Swine/Oklahoma/18717/99 (A/H3N2) segment 4 (HA) 366.8 2.582860e-100 219/229 (95%)
EPI337384 A/swine/Nebraska/00722/2005 (A/H0) segment 4 (HA) 364.9 9.289616e-100 221/232 (95%)
EPI337349 A/swine/Minnesota/01146/2006 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 221/232 (95%)
EPI314695 A/swine/QC/440-A/2009 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 221/232 (95%)
EPI314335 A/turkey/BC/1529-3/2005 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 221/232 (95%)
EPI259504 A/swine/Minnesota/03008/2010 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 221/232 (95%)
EPI227574 A/turkey/NC/353568/2005 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 221/232 (95%)
EPI225756 A/swine/Minnesota/66853/2006 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 221/232 (95%)
EPI222674 A/swine/Oklahoma/008722/2007 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 221/232 (95%)
EPI222657 A/swine/Minnesota/5947/2007 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 221/232 (95%)
EPI176077 A/Siena/3/1995 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI168650 A/turkey/North Carolina/353568/2005 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 221/232 (95%)
EPI166252 A/swine/Minnesota/SG-00234/2005 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 221/232 (95%)
EPI161023 A/Hong Kong/CUHK18886/1998 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 219/230 (95%)
EPI105502 A/Rabat/18/97 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI103181 A/swine/Manitoba/12707/2005 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 221/232 (95%)
EPI92131 A/New York/506/1998 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 219/230 (95%)
EPI91808 A/New York/548/1998 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 219/230 (95%)
EPI91789 A/New York/547/1997 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 219/230 (95%)
EPI91770 A/New York/546/1998 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 219/230 (95%)
EPI91504 A/New York/522/1997 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 219/230 (95%)
EPI90858 A/New York/505/1997 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 219/230 (95%)
EPI36422 A/New York/639/1995 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI35472 A/New York/647/1995 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI34655 A/New York/641/1996 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI34617 A/New York/635/1996 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI34579 A/New York/624/1996 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI34541 A/New York/571/1996 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI33185 A/New York/623/1995 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI33033 A/New York/648/1995 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI32995 A/New York/637/1996 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI32976 A/New York/634/1995 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI32938 A/New York/628/1995 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI32900 A/New York/622/1996 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI32881 A/New York/619/1996 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)
EPI32862 A/New York/618/1995 (A/H3N2) segment 4 (HA) 364.9 9.289616e-100 220/231 (95%)

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PostPosted: Fri Dec 23, 2011 12:42 pm 
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Collection dates at 16 days apart (Nov 21 and Dec 7)

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PostPosted: Fri Dec 23, 2011 1:19 pm 
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http://www.recombinomics.com/News/12231 ... _H2H2.html

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