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PostPosted: Wed Dec 28, 2011 9:04 pm 
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Community Transmission of Oseltamivir-Resistant A(H1N1)pdm09 Influenza

N Engl J Med 2011; 365:2541-2542December 29, 2011
Article

To the Editor:

Oseltamivir-resistant prepandemic seasonal influenza A (H1N1) viruses with a H275Y neuraminidase substitution spread globally in 2008,1 reducing the effectiveness of oseltamivir.2 Although oseltamivir-resistant pandemic 2009 A (H1N1) viruses, now known as A(H1N1)pdm09, have been detected in persons receiving oseltamivir treatment, they have been detected in less than 1% of untreated patients in the community, and transmission has been documented only in closed settings or settings involving close contact with infected persons.3,4

We identified sustained community transmission of oseltamivir-resistant A(H1N1)pdm09 viruses in Australia. Reverse-transcriptase-polymerase-chain-reaction-positive A(H1N1)pdm09 viruses were obtained from 182 patients in emergency departments, intensive care units, and general practitioners' offices in the Hunter New England region of New South Wales, Australia, between May and August 2011.

Viruses were analyzed for oseltamivir resistance. A total of 29 A(H1N1)pdm09 viruses (16%) contained the H275Y neuraminidase substitution responsible for oseltamivir resistance, and all were resistant to the adamantine class of antiviral agents. Culture was attempted for all specimens and yielded 90 isolates, of which 15 contained the H275Y substitution. A fluorescence-based neuraminidase inhibition assay5 of the H275Y isolates showed that the IC50 value (the concentration of drug required to inhibit neuraminidase activity by 50%) was 513 times higher for oseltamivir and 80 times higher for peramivir than the IC50 values associated with wild-type strains. However, these isolates remained fully sensitive to zanamivir. The frequency of H275Y variants was 4 in 50 viruses in June (8%), 20 in 85 viruses in July (24%), and 4 in 45 viruses in August (9%). Hemagglutinin and neuraminidase sequence analysis (Global Initiative on Sharing All Influenza Data accession numbers, EPI334765-334790 and 335634-335637) showed that the resistant strains were closely related (99.9 to 100% hemagglutinin nucleotide similarity and 99.6 to 100% neuraminidase nucleotide similarity), suggesting the spread of a single variant.

Most patients lived within a 50-km (31-mi) radius of Newcastle, the seventh largest city in Australia, and three patients lived 90, 150, and 490 km (56, 93, and 304 mi) away. Two genetically related strains were detected elsewhere in the state, including in Sydney.

An ethics waiver was granted and authorized under the New South Wales Public Health Act of 2010 for an urgent public health investigation. Hospital records and interviews with patients and general practitioners revealed that only 1 of the 29 patients with resistant influenza had received oseltamivir before the influenza specimen collection (Table 1Table 1Characteristics of Patients with Oseltamivir-Resistant Influenza in the Hunter New England Health District, According to Hospital Records and Responses from Interviews with Patients and General Practitioners.). The ages were similar among the 29 patients with oseltamivir-resistant influenza (median, 31 years; range, 4 months to 62 years) and the 153 patients with sensitivity to oseltamivir (median, 29 years; range, 1 month to 74 years). Five patients with oseltamivir-resistant influenza were children younger than 5 years of age. The resistant viruses remained antigenically similar to the vaccine strain, including those from 3 patients who received the 2011 influenza vaccine (Table 1). Four households had 2 affected patients each, and 2 other patients shared a short car journey. The remaining patients had no known epidemiologic link with the other patients with oseltamivir-resistant influenza described here.

As winter approaches in the Northern Hemisphere, it remains important to ensure that A(H1N1)pdm09 strains from early in the season are analyzed rapidly for any indication that this transmissible oseltamivir-resistant variant has spread.


Aeron C. Hurt, Ph.D.
World Health Organization (WHO) Collaborating Centre for Reference and Research on Influenza, North Melbourne, VIC, Australia
aeron.hurt@influenzacentre.org

Kate Hardie, M.P.H.
Hunter New England Population Health, Newcastle, NSW, Australia


Noelene J. Wilson, B.Med.Sc.
Hunter Area Pathology Service, Newcastle, NSW, Australia


Yi-Mo Deng, Ph.D.
WHO Collaborating Centre for Reference and Research on Influenza, North Melbourne, VIC, Australia


Maggi Osbourn, B.N., Grad.Dip.Legal Studies, B.N., Grad.Dip.Legal Studies
Hunter New England Population Health, Newcastle, NSW, Australia


Nicole Gehrig, B.Sc.
Hunter Area Pathology Service, Newcastle, NSW, Australia


Anne Kelso, Ph.D.
WHO Collaborating Centre for Reference and Research on Influenza, North Melbourne, VIC, Australia


Supported by a grant from the Australian Government Department of Health and Ageing to the Melbourne WHO Collaborating Centre for Reference and Research on Influenza. Members of the investigational team are listed in the Supplementary Appendix, available with the full text of this letter at NEJM.org.

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PostPosted: Wed Dec 28, 2011 9:14 pm 
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H274Y Tamiflu Resistance Clonal Expansion - Newcastle Australia
Recombinomics Commentary 21:40
August 26, 2011


A cluster of oseltamivir-resistant A(H1N1)2009 influenza cases with onset between May and August 2011 has been detected in the Hunter region of New South Wales (NSW), Australia.

Viruses from 25 of 184 (14 percent) A(H1N1)2009 cases from the Hunter New England region exhibited highly reduced oseltamivir sensitivity due to the H275Y substitution in the neuraminidase.

15 of the 1st 16 cases lived within a 50-km radius of the regional centre of Newcastle. 16 of the 25 patients have been interviewed, and none had received oseltamivir prior to influenza specimen collection........

http://www.recombinomics.com/News/08261 ... ralia.html

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PostPosted: Wed Dec 28, 2011 9:28 pm 
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Posts: 27328
Location: Pittsburgh, PA USA
H274Y at GISAID

EPI346700 A/Lorraine/1176/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI340685 A/Hyogo/10K291/2011 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI340679 A/Kyoto/10K124/2011 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI340312 A/Roma/ISS9825/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI340311 A/Roma/ISS9998/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI339344 A/St.Petersburg/CRIE-GoVM/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI336869 A/KAWASAKI/122/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI334783 A/NEWCASTLE/89/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI334781 A/NEWCASTLE/85/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI334779 A/NEWCASTLE/82/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI334777 A/NEWCASTLE/62/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI334775 A/NEWCASTLE/53/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI334773 A/NEWCASTLE/37/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI334771 A/NEWCASTLE/2/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI334769 A/NEWCASTLE/17/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI334767 A/NEWCASTLE/151/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI334765 A/NEWCASTLE/132/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI334715 A/NIIGATA/62/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI333155 A/MIYAZAKI/53/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI333001 A/PHILIPPINES/498/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI332645 A/BRISBANE/15/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI331693 A/VICTORIA/1036/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI331563 A/BRUNEI/15/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI331341 A/SINGAPORE/591/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329139 A/HIROSHIMA/66/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329104 A/KANAGAWA/75/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329101 A/FUKUSHIMA/17/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329097 A/TOKYO/11203/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329089 A/AICHI/155/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329085 A/SAITAMA/179/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329083 A/SAITAMA/177/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329080 A/OSAKA-C/2004/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329077 A/SAITAMA/160/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329075 A/SAITAMA/88/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329073 A/TOTTORI/17/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329054 A/OSAKA/83/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329052 A/OSAKA/71/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329050 A/SHIMANE/164/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI329048 A/TOCHIGI/34/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI326225 A/Slovakia/150/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI324948 A/Paris/7974/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI323926 A/Thailand/CU-MV9/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321489 A/NARA/59/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321487 A/NARA/56/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321483 A/NAGASAKI-C/58/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321475 A/TOCHIGI/64/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321473 A/GIFU/21/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321471 A/IBARAKI/108/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321469 A/IBARAKI/107/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321467 A/IBARAKI/106/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321465 A/IBARAKI/104/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321463 A/IBARAKI/103/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321455 A/ISHIKAWA/70/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321450 A/SHIGA/28/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321448 A/SHIGA/28/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321442 A/NARA/54/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321440 A/KAGAWA/1/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321437 A/CHIBA/1027/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321433 A/OITA/77/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321429 A/OITA/72/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321424 A/WAKAYAMA-C/6/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321417 A/AKITA/5/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI321213 A/Sydney/DD3-48/2010 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI320860 A/Singapore/GP4344/2010 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI320610 A/Lebanon/09L-22/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI320456 A/Chennai/10/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI320273 A/OKINAWA/40/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI320268 A/OSAKA/52/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI320265 A/HIROSHIMA/55/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI320246 A/NIIGATA/214/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI320244 A/SHIZUOKA/37/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI320214 A/Lorraine/7214/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI320038 A/Maryland/04/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI319175 A/Perth/29/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI318171 A/HOKKAIDO/12/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI318168 A/NIIGATA/51/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI318167 A/KOBE/537/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI318165 A/IWATE/1008/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI318161 A/KAGAWA/2/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI318154 A/HIROSHIMA/45/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI318152 A/HIROSHIMA/49/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI318149 A/WAKAYAMA/23/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI318139 A/NIIGATA/62/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI318133 A/SAPPORO/19/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI318131 A/YAMAGUCHI/35/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI317539 A/Denmark/72/2011 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI315541 A/Boston/678/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI313295 A/Lyon/48.49/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI313293 A/Lyon/48.425/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI313262 A/Hong Kong/FFD/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI313247 A/Hong Kong/423432/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI313234 A/Hong Kong/23369/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI309995 A/Maryland/08/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI309989 A/Maryland/07/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI309983 A/Maryland/06/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI309969 A/Maryland/04/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI309953 A/Maine/04/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI309907 A/Indiana/04/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI309876 A/Delaware/08/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI309869 A/Delaware/07/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI309864 A/Delaware/06/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI309856 A/Delaware/04/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI309836 A/Colorado/11/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI307878 A/Thailand/CU-H2389/2010 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI307877 A/Thailand/CU-H2358/2010 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI307876 A/Thailand/CU-H2283/2010 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI307875 A/Thailand/CU-H1222r/2010 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI307254 A/Taiwan/2343/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI307252 A/Taiwan/7949/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI307248 A/Taiwan/7336/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI307246 A/Taiwan/7855/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI307245 A/Taiwan/7717/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI307244 A/Taiwan/6663/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI305490 A/HIROSHIMA/17/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI305475 A/YOKOHAMA/29/2011 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI305291 A/Galicia/RR6664/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI305273 A/Galicia/RR6685/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI305271 A/Galicia/RR6666/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI305172 A/Baleares/RR6121/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI305096 A/Navarra/RR5989/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI304300 A/Canada-PQ/RV3189/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI304133 A/Canada-ON/RV2904/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI302870 A/Canada-AB/RV2828/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI302838 A/Canada-AB/RV2823/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI302726 A/Canada-AB/RV2735/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI301267 A/SAITAMA-C/174/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300710 A/England/94840153/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300709 A/England/94840152/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300701 A/England/94780019/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300697 A/England/94740140/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300696 A/England/94740139/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300695 A/England/94740138/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300694 A/England/94740137/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300692 A/England/94740049/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300691 A/England/94640080/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300689 A/England/94640078/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300681 A/England/00380020/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300680 A/England/00380018/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300679 A/England/00380015/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300678 A/England/00380013/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300677 A/England/00380009/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300483 A/Argentina/HNRG1160/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300477 A/Argentina/HNRG1154/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI300452 A/Argentina/HNRG1129/2009 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI299028 A/duck/Interior Alaska/7MP1582/2007 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI295379 A/CHIBA/12/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI287186 A/SENDAI/151/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI286659 A/AICHI/1576/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI283057 A/Dundgobi/381/2010 (A/H1N1) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI281310 A/Hokkaido/256/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI277206 A/Athens/INS417/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI276935 A/WAKAYAMA-C/19/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI272885 A/Lisboa/171/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI272584 A/OSAKA-C/20/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI272419 A/SHIZUOKA-C/21/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI272416 A/OKAYAMA/1/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI272414 A/NIIGATA-C/186/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI272406 A/MIYAGI/170/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI272398 A/KUMAMOTO/2/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI272386 A/AICHI/1222/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI270023 A/Perth/262/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI269973 A/Perth/431/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI269970 A/Perth/261/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI269934 A/Singapore/591/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI269914 A/Victoria/2132/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI269895 A/Sydney/2056/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI269886 A/Sydney/614/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI269884 A/Sydney/612/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI269470 A/Netherlands/2445b/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI269454 A/Netherlands/2290/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI267069 A/Valencia/HLF2/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI266942 A/Pennsylvania/30/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI266342 A/Mexico city/CIA10/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI266272 A/Pennsylvania/30/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI263442 A/Singapore/GP562/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI256824 A/Lisboa/171/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI256822 A/Lisboa/171/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI256740 A/Mexico city/CIA9/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI255966 A/Israel/MF15979/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI255852 A/Israel/MF 6290/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI255064 A/Haishu/SWL110/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI254680 A/Seoul/7/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI254677 A/Seoul/2883/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI254674 A/Seoul/1870/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI254668 A/Seoul/1785/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI254665 A/Gyeongnam/1820/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI254660 A/Gwangju/61/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI254655 A/Daejeon/1871/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI254646 A/Daegu/1873/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI254643 A/Daegu/1855/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI254532 A/SAPPORO/31/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI254530 A/SHIZUOKA-C/247/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI253896 A/Sachsen/4/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI253840 A/Rheinland-Pfalz/86/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI253253 A/Hunan/SWL3/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI252356 A/Ontario/25913/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI252316 A/Ontario/10296/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI252308 A/Ontario/10016/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI249969 A/Bethesda/NIH106-D32/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI249968 A/Bethesda/NIH106-D14/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI249966 A/Bethesda/NIH107-D31/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248555 A/NIIGATA/19/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248553 A/NIIGATA/16/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248549 A/YAMAGATA/29/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248547 A/TOTTORI/225/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248545 A/TOKYO/91256/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248543 A/TOCHIGI/612/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248541 A/SHIZUOKA-C/270/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248539 A/SHIZUOKA-C/172/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248537 A/SAITAMA/396/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248536 A/MIE/100/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248534 A/KOBE/92495/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248532 A/KITAKYUSYU/4/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248530 A/HYOGO/2003/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248528 A/FUKUSHIMA/452/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI248526 A/FUKUOKA/1/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI247774 A/Thessaloniki/1652/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI247124 A/Mexico/InDRE797/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI246371 A/Thessaloniki/225/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI245818 A/Buenos Aires/HIFJM240866/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI244409 A/Singapore/GN285/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI244284 A/YOKOHAMA/1538/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI244282 A/YAMAGATA/534/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI244280 A/WAKAYAMA/291/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI244278 A/WAKAYAMA-C/1/2010 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI244276 A/TOCHIGI/609/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI244274 A/TOCHIGI/471/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI244270 A/SAPPORO/576/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI244268 A/SAITAMA/408/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI244266 A/SAITAMA/374/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI244264 A/MIYAZAKI/111/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI243983 A/Israel/MF 6290/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI243866 A/North Carolina/59/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI243812 A/YOKOHAMA/1563/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI239642 A/Vietnam/2043/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI234568 A/Russia/61/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI233201 A/North Carolina/49/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI233181 A/North Carolina/42/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI233177 A/North Carolina/41/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI233174 A/North Carolina/40/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI233169 A/North Carolina/39/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI230336 A/Argentina/HNRG23/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI230274 A/Israel/6290/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI230124 A/SAPPORO/190/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI230122 A/OSAKA/2024/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI230118 A/NIIGATA/1233/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI230116 A/CHIBA/1017/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI227954 A/UAE/A01/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI226599 A/SHIMANE/188/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)
EPI226591 A/SHIGA/61/2009 (A/H1N1 pdm09) segment 6 (NA) 27.0 7.398934e+00 14/14 (100%)

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PostPosted: Wed Dec 28, 2011 9:53 pm 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 27328
Location: Pittsburgh, PA USA
Related HA sequences

EPI334784 A/NEWCASTLE/89/2011 (A/H1N1 pdm09) segment 4 (HA) 3133.0 0.000000e+00 1698/1698 (100%)
EPI334790 A/SOUTH AUSTRALIA/24/2011 (A/H1N1 pdm09) segment 4 (HA) 3122.0 0.000000e+00 1695/1698 (99%)
EPI334782 A/NEWCASTLE/85/2011 (A/H1N1 pdm09) segment 4 (HA) 3122.0 0.000000e+00 1695/1698 (99%)
EPI334780 A/NEWCASTLE/82/2011 (A/H1N1 pdm09) segment 4 (HA) 3122.0 0.000000e+00 1695/1698 (99%)
EPI334778 A/NEWCASTLE/62/2011 (A/H1N1 pdm09) segment 4 (HA) 3122.0 0.000000e+00 1695/1698 (99%)
EPI334772 A/NEWCASTLE/2/2011 (A/H1N1 pdm09) segment 4 (HA) 3122.0 0.000000e+00 1695/1698 (99%)
EPI334770 A/NEWCASTLE/17/2011 (A/H1N1 pdm09) segment 4 (HA) 3122.0 0.000000e+00 1695/1698 (99%)
EPI334786 A/NEWCASTLE/84/2011 (A/H1N1 pdm09) segment 4 (HA) 3116.4 0.000000e+00 1694/1698 (99%)
EPI334776 A/NEWCASTLE/53/2011 (A/H1N1 pdm09) segment 4 (HA) 3116.4 0.000000e+00 1694/1698 (99%)
EPI334768 A/NEWCASTLE/151/2011 (A/H1N1 pdm09) segment 4 (HA) 3116.4 0.000000e+00 1694/1698 (99%)
EPI334766 A/NEWCASTLE/132/2011 (A/H1N1 pdm09) segment 4 (HA) 3116.4 0.000000e+00 1694/1698 (99%)
EPI332333 A/Bangkok/INS477/2010 (A/H1N1) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI332317 A/Bangkok/INS479/2010 (A/H1N1) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI331207 A/Hong Kong/3973/2011 (A/H1N1 pdm09) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI319434 A/Brussels/S0004/2011 (A/H1N1 pdm09) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI313320 A/Tehran/5963/2010 (A/H1N1 pdm09) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI313318 A/Tehran/5958/2010 (A/H1N1 pdm09) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI313284 A/Karaj/6072/2010 (A/H1N1 pdm09) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI313282 A/Karaj/5987/2010 (A/H1N1 pdm09) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI313280 A/Karaj/5985/2010 (A/H1N1 pdm09) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI313201 A/Ghom/215/2010 (A/H1N1 pdm09) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI301435 A/Tehran/5652/2010 (A/H1N1 pdm09) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI298421 A/Karaj/5327/2010 (A/H1N1 pdm09) segment 4 (HA) 3105.3 0.000000e+00 1692/1698 (99%)
EPI334774 A/NEWCASTLE/37/2011 (A/H1N1 pdm09) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI332253 A/Bangkok/INS492/2010 (A/H1N1) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI332173 A/Bangkok/INS504/2010 (A/H1N1) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI332069 A/Khon Kaen/INS523/2010 (A/H1N1) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI316000 A/Thailand/CU-H2358/2010 (A/H1N1) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI315878 A/Thailand/CU-H2698/2010 (A/H1N1) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI315862 A/Thailand/CU-B4339/2010 (A/H1N1) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI315730 A/Thailand/CU-H2543/2010 (A/H1N1) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI313286 A/Karaj/6076/2010 (A/H1N1 pdm09) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI313278 A/Karaj/5924/2010 (A/H1N1 pdm09) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI313276 A/Karaj/5921/2010 (A/H1N1 pdm09) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI313272 A/Karaj/5607/2010 (A/H1N1 pdm09) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI304607 A/Tehran/5675/2010 (A/H1N1 pdm09) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI302345 A/BRUNEI/237/2010 (A/H1N1 pdm09) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI301437 A/Tehran/5858/2010 (A/H1N1 pdm09) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI294405 A/BRUNEI/218/2010 (A/H1N1 pdm09) segment 4 (HA) 3099.8 0.000000e+00 1691/1698 (99%)
EPI310046 A/New Hampshire/03/2011 (A/H1N1 pdm09) segment 4 (HA) 3096.1 0.000000e+00 1690/1698 (99%)
EPI301722 A/California/23/2010 (A/H1N1 pdm09) segment 4 (HA) 3096.1 0.000000e+00 1690/1698 (99%)
EPI338389 A/Latvia/1-138/2011 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI335590 A/Bangkok/INS484/2010 (A/H1N1) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI335566 A/Bangkok/INS488/2010 (A/H1N1) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI335550 A/Bangkok/INS502/2010 (A/H1N1) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI335534 A/Bangkok/INS509/2010 (A/H1N1) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI333448 A/Moscow/WRAIR1929P/2010 (A/H1N1) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI332717 A/Phiippines/TMC11-9/2011 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI332277 A/Bangkok/INS485/2010 (A/H1N1) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI332141 A/Bangkok/INS510/2010 (A/H1N1) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI332117 A/Bangkok/INS514/2010 (A/H1N1) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI331605 A/MACAU/200808/2011 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI331286 A/VICTORIA/504/2011 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI330324 A/Gansu-Chengguan/SWL579/2011 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI330284 A/Jiangsu-Xinpu/SWL187/2011 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI330076 A/Hunan-Furong/SWL410/2011 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI326195 A/Macedonia/86/2011 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI324430 A/Sydney/DD3-58/2011 (A/H1N1) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI315886 A/Thailand/CU-H2911/2011 (A/H1N1) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI313274 A/Karaj/5795/2010 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI310026 A/Mississippi/04/2011 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI309937 A/Laos/1096/2010 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI307854 A/Beijing/3907/2010 (A/H1N1) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI307338 A/Ontario/720545/2010 (A/H1N1) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI307166 A/Moscow/IIV-33/2010 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI304621 A/Karaj/5685/2010 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI304609 A/Karaj/5718/2010 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI302386 A/TOWNSVILLE/72/2010 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI302129 A/Arkansas/06/2010 (A/H1N1 pdm09) segment 4 (HA) 3094.3 0.000000e+00 1690/1698 (99%)
EPI346677 A/Iceland/3/2011 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI342454 A/North Carolina/09/2011 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI336843 A/Finland/17/2010 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI336840 A/Finland/20/2010 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI336831 A/Finland/29/2010 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI336828 A/Finland/32/2010 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI336021 A/Ankara/02/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI332724 A/Jiangsu-suzhou/J41/2011 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI332269 A/Bangkok/INS489/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI332229 A/Bangkok/INS495/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI332213 A/Bangkok/INS498/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI332109 A/Bangkok/INS517/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI332077 A/Khon Kaen/INS522/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI332045 A/Bangkok/INS513/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI330180 A/Beijing-Xicheng/SWL1261/2011 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI325588 A/Federated States Of Micronesia/6119/2011 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI324422 A/Sydney/DD3-57/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI321227 A/Sydney/DD3-51/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI320857 A/Singapore/GP433/2011 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI320855 A/Singapore/GP39/2011 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI319999 A/Barbados/104/2011 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI316490 A/Wisconsin/16/2011 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI315854 A/Thailand/CU-B4148/2010 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI310161 A/Washington/02/2011 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI309789 A/Alaska/08/2011 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI309786 A/Alaska/07/2011 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI306383 A/Vladivistok/7/2010 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI304619 A/Ulaanbaatar/190/2011 (A/H1N1) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI302117 A/Japan/8736/2011 (A/H1N1 pdm09) segment 4 (HA) 3088.7 0.000000e+00 1689/1698 (99%)
EPI331711 A/BRISBANE/151/2011 (A/H1N1 pdm09) segment 4 (HA) 3085.0 0.000000e+00 1688/1698 (99%)
EPI331608 A/PHILIPPINES/1343/2011 (A/H1N1 pdm09) segment 4 (HA) 3085.0 0.000000e+00 1688/1698 (99%)

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PostPosted: Thu Dec 29, 2011 4:36 am 
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Location: Pittsburgh, PA USA
By Karen Kaplan • Los Angeles Times STLtoday.com | Posted: Thursday, December 29, 2011 12:00 am

The flu season is still young in the United States and the rest of the Northern Hemisphere, but Australia wrapped up its flu season months ago, and public health officials there have some disturbing news to report: The version of so-called swine flu that is resistant to the drug Tamiflu is spreading more easily in the land Down Under.

Swine flu refers to the H1N1 flu virus that caused a pandemic in 2009. It emerged in April in Mexico and spread swiftly around the globe, traveling to 214 countries and territories and killing more than 18,000 people, according to the World Health Organization. Humans were unusually vulnerable to this particular strain — a combination of viruses from birds, pigs and people — because their immune systems had never encountered it before.

Tamiflu, also known by the generic name oseltamivir, was frequently prescribed to patients, and it didn't take long for a version of H1N1 to emerge that was resistant to the drug. Luckily, this strain was a minor player, infecting less than 1 percent of people who were tested. In those cases, it spread between people only when they were in closed settings or had close contact with one another.

Fast-forward to 2011. In and around the Australian city of Newcastle, the Tamiflu-resistant H1N1 virus was spreading more easily among humans, according to a report being published in today's edition of the New England Journal of Medicine.

Public health officials took virus samples from 182 patients treated in doctors' offices and hospitals between May and August. They found that 29 of those samples — or 16 percent — turned out to be resistant to Tamiflu.

The 29 patients ranged in age from 4 months to 62 years, with a median age of 31; 17 of the patients were female, including three who were pregnant. Among all 29 patients, the most common flu symptoms were cough (experienced by 86 percent of patients) and fever (affecting 76 percent of patients). Seven patients required admission to the hospital, but none was treated in the ICU and none died.

The authors of the report, including three scientists working for WHO, warned flu experts in the Northern Hemisphere to be on the lookout for this flu strain — or any other strain that is resistant to Tamiflu — this winter.



Read more: http://www.stltoday.com/news/national/h ... z1huXALtjr

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