Rhiza Labs FluTracker Forum

Top 100 NS matches

JF346747.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 8 nonstructural protein 1 (NS1) and nuclear export protein (NEP) genes, partial cds 1243 1243 100% 0.0 100%
JF346746.1 Influenza A virus (A/swine/Korea/4941/2010(H1N2)) segment 8 nonstructural protein 1 (NS1) and nuclear export protein (NEP) genes, partial cds 1243 1243 100% 0.0 100%
JF346745.1 Influenza A virus (A/swine/Korea/4940/2010(H1N2)) segment 8 nonstructural protein 1 (NS1) and nuclear export protein (NEP) genes, partial cds 1243 1243 100% 0.0 100%
JF346744.1 Influenza A virus (A/swine/Korea/4779/2010(H1N2)) segment 8 nonstructural protein 1 (NS1) and nuclear export protein (NEP) genes, partial cds 1243 1243 100% 0.0 100%
JF346742.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 8 nonstructural protein 1 (NS1) and nuclear export protein (NEP) genes, partial cds 1243 1243 100% 0.0 100%
CY087020.1 Influenza A virus (A/New York/4764/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY087012.1 Influenza A virus (A/New York/3565/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY086997.1 Influenza A virus (A/New York/3251/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY086973.1 Influenza A virus (A/New York/3198/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY086952.1 Influenza A virus (A/swine/Thailand/CU-M8_2/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY040721.2 Influenza A virus (A/New York/3238/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
JF327344.1 Influenza A virus (A/Finland/671/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY084466.1 Influenza A virus (A/New York/6537/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083946.1 Influenza A virus (A/San Diego/INS194/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083930.1 Influenza A virus (A/Warsaw/INS148/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083874.1 Influenza A virus (A/San Diego/INS49/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083834.1 Influenza A virus (A/San Diego/INS07/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083829.1 Influenza A virus (A/Wroclaw/INS435/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083801.1 Influenza A virus (A/Berlin/INS362/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083757.1 Influenza A virus (A/Brussels/INS205/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083694.1 Influenza A virus (A/Terrassa/INS94/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083665.1 Influenza A virus (A/San Diego/INS41/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083555.1 Influenza A virus (A/Budapest/WRAIR2393T/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083547.1 Influenza A virus (A/Budapest/WRAIR2393N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083491.1 Influenza A virus (A/Mexico City/WRAIR1691N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083451.1 Influenza A virus (A/Mexico City/WRAIR1679N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083443.1 Influenza A virus (A/Ft.Benning/WRAIR1669P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083435.1 Influenza A virus (A/San Diego/WRAIR1668P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083411.1 Influenza A virus (A/San Diego/WRAIR1665P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083395.1 Influenza A virus (A/San Diego/WRAIR1663P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083387.1 Influenza A virus (A/San Diego/WRAIR1662P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083379.1 Influenza A virus (A/Pendleton/WRAIR1661P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083371.1 Influenza A virus (A/South Carolina/WRAIR1660P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083348.1 Influenza A virus (A/San Diego/WRAIR1656P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083260.1 Influenza A virus (A/San Diego/WRAIR1642P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083204.1 Influenza A virus (A/South Carolina/WRAIR1503P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083196.1 Influenza A virus (A/California/WRAIR1502P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083188.1 Influenza A virus (A/South Carolina/WRAIR1501P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083180.1 Influenza A virus (A/South Carolina/WRAIR1500P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083148.1 Influenza A virus (A/Bishkek/WRAIR0883N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083124.1 Influenza A virus (A/Quito/WRAIR0617T/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083060.1 Influenza A virus (A/Colorado/WRAIR0353S/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083052.1 Influenza A virus (A/Lima/WRAIR0285F/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY081129.3 Influenza A virus (A/Thailand/CU-C1028/2010(H1N1)) nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
CY081530.1 Influenza A virus (A/Cambodia/NHRCC00006/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY081123.1 Influenza A virus (A/Thailand/CU-C1025/2010(H1N1)) nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
CY081117.1 Influenza A virus (A/Thailand/CU-C1006/2010(H1N1)) nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
CY081111.1 Influenza A virus (A/Thailand/CU-C1005/2010(H1N1)) nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
CY050371.1 Influenza A virus (A/Korea/S1/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
HQ240370.1 Influenza A virus (A/Canada-AB/RV2735/2009(H1N1)) segment 8 nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
HQ240243.1 Influenza A virus (A/Canada-MB/RV0062-10/2009(H1N1)) segment 8 nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
HQ840321.1 Influenza A virus (A/swine/Minnesota/165A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HQ840313.1 Influenza A virus (A/swine/Minnesota/136B/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HQ840308.1 Influenza A virus (A/swine/Minnesota/130A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HQ840300.1 Influenza A virus (A/swine/Minnesota/130A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HQ840294.1 Influenza A virus (A/swine/Minnesota/074A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY074044.1 Influenza A virus (A/Argentina/HNRG45/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074034.1 Influenza A virus (A/Argentina/HNRG36/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074029.1 Influenza A virus (A/Argentina/HNRG33/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074024.1 Influenza A virus (A/Argentina/HNRG32/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074014.1 Influenza A virus (A/Argentina/HNRG21/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074004.1 Influenza A virus (A/Argentina/HNRG14/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY073999.1 Influenza A virus (A/Argentina/HNRG107/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY073978.1 Influenza A virus (A/Argentina/HNRG104/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
GU983288.1 Influenza A virus (A/Eastern India/2503/2009(H1N1)) segment 8 nonstructural protein 1 (NS1) gene, complete cds; and nuclear export protein (NEP) gene, partial cds 1235 1235 100% 0.0 99%
GU983287.1 Influenza A virus (A/Eastern India/2499/2009(H1N1)) segment 8 nonstructural protein 1 (NS1) gene, complete cds; and nuclear export protein (NEP) gene, partial cds 1235 1235 100% 0.0 99%
GU983282.1 Influenza A virus (A/Eastern India/327/2009(H1N1)) segment 8 nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
GU983281.1 Influenza A virus (A/Eastern India/312/2009(H1N1)) segment 8 nonstructural protein 1 (NS1) gene, complete cds; and nuclear export protein (NEP) gene, partial cds 1235 1235 100% 0.0 99%
GU983280.1 Influenza A virus (A/Eastern India/261/2009(H1N1)) segment 8 nonstructural protein 1 (NS1) gene, complete cds; and nuclear export protein (NEP) gene, partial cds 1235 1235 100% 0.0 99%
GU983275.1 Influenza A virus (A/Eastern India/67/2009(H1N1)) segment 8 nonstructural protein 1 (NS1) gene, complete cds; and nuclear export protein (NEP) gene, partial cds 1235 1235 100% 0.0 99%
GU983274.1 Influenza A virus (A/Eastern India/66/2009(H1N1)) segment 8 nonstructural protein 1 (NS1) gene, complete cds; and nuclear export protein (NEP) gene, partial cds 1235 1235 100% 0.0 99%
CY075860.1 Influenza A virus (A/swine/Argentina/CIP051-BsAs76/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY075664.1 Influenza A virus (A/Boston/628/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075648.1 Influenza A virus (A/Boston/704/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075624.1 Influenza A virus (A/Boston/698/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075608.1 Influenza A virus (A/Boston/681/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075592.1 Influenza A virus (A/Boston/666/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075584.1 Influenza A virus (A/Boston/663/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075536.1 Influenza A virus (A/Boston/612/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075471.1 Influenza A virus (A/Chile/4438/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075455.1 Influenza A virus (A/Chile/4257/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075431.1 Influenza A virus (A/Chile/4064/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075423.1 Influenza A virus (A/Chile/3935/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075415.1 Influenza A virus (A/Chile/3905/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075407.1 Influenza A virus (A/Chile/3819/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075391.1 Influenza A virus (A/Chile/3760/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075383.1 Influenza A virus (A/Chile/3586/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075375.1 Influenza A virus (A/Chile/3553/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075367.1 Influenza A virus (A/Chile/3467/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075343.1 Influenza A virus (A/Chile/3361/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075327.1 Influenza A virus (A/Chile/3295/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075319.1 Influenza A virus (A/Chile/3244/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075303.1 Influenza A virus (A/Chile/3220/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075295.1 Influenza A virus (A/Chile/3123/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075287.1 Influenza A virus (A/Chile/3056/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075271.1 Influenza A virus (A/Chile/2994/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075263.1 Influenza A virus (A/Chile/2911/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075255.1 Influenza A virus (A/Chile/2909/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075247.1 Influenza A virus (A/Chile/2362/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY075239.1 Influenza A virus (A/Chile/2851/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%

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Top 100 HA matches

JF346729.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 4 hemagglutinin (HA) gene, partial cds 470 470 100% 2e-129 100%
JF346728.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 4 hemagglutinin (HA) gene, partial cds 470 470 100% 2e-129 100%
JF346727.1 Influenza A virus (A/swine/Korea/4372/2009(H1N2)) segment 4 hemagglutinin (HA) gene, partial cds 470 470 100% 2e-129 100%
JF346723.1 Influenza A virus (A/swine/Korea/4456/2009(H1N2)) segment 4 hemagglutinin (HA) gene, partial cds 470 470 100% 2e-129 100%
GU817056.1 Influenza A virus (A/swine/Minnesota/02951/2009(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 351 351 100% 1e-93 93%
GU817054.1 Influenza A virus (A/swine/Minnesota/02949/2009(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 351 351 100% 1e-93 93%
GQ229309.1 Influenza A virus (A/swine/Hong Kong/78/2003(H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 351 351 100% 1e-93 93%
CY040509.1 Influenza A virus (A/swine/North Carolina/63607-9/2008(H1N1)) segment 4 sequence 351 351 100% 1e-93 93%
CY040480.1 Influenza A virus (A/swine/Minnesota/63607-15/2008 (H1N1)) segment 4 sequence 351 351 100% 1e-93 93%
CY040476.1 Influenza A virus (A/swine/Minnesota/225-4/2008(H1N1)) segment 4 sequence 351 351 100% 1e-93 93%
AF455675.1 Influenza A virus (A/Swine/Ohio/891/01(H1N2)) hemagglutinin (HA) gene, complete cds 351 351 100% 1e-93 93%
AF250124.1 Influenza A virus (A/Swine/Indiana/9K035/99 (H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 351 351 100% 1e-93 93%
CY040485.1 Influenza A virus (A/swine/Minnesota/63607-30/2008(H1N1)) segment 4 sequence 345 345 95% 8e-92 94%
AY060050.1 Influenza A virus (A/SW/MN/16419/01(H1N2)) hemagglutinin (HA) gene, complete cds 345 345 95% 8e-92 94%
CY086912.1 Influenza A virus (A/swine/Minnesota/226128/2010(H1N1)) hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
CY086467.1 Influenza A virus (A/swine/Hong Kong/1068/2002(H1N2)) hemagglutinin (HA) gene, partial cds 343 343 100% 3e-91 93%
CY086465.1 Influenza A virus (A/swine/Hong Kong/1065/2002(H1N2)) hemagglutinin (HA) gene, partial cds 343 343 100% 3e-91 93%
HQ378729.1 Influenza A virus(A/swine/Iowa/46519-1/2007(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
HM461778.1 Influenza A virus (A/swine/Ohio/02026/2008(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 343 343 100% 3e-91 93%
HM461810.1 Influenza A virus (A/swine/Missouri/02060/2008(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 343 343 100% 3e-91 93%
HM570051.1 Influenza A virus (A/swine/Minnesota/03025/2010(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
GQ484355.1 Influenza A virus (A/swine/Kansas/77778/2007(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
CY040561.1 Influenza A virus (A/swine/North Carolina/28126/2003(H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
CY040493.1 Influenza A virus (A/swine/Missouri/63607-16/2008(H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
CY040479.1 Influenza A virus (A/swine/Minnesota/63607-12/2008 (H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
CY040477.1 Influenza A virus (A/swine/Minnesota/225-5/2008 (H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
CY040475.1 Influenza A virus (A/swine/Minnesota/225-3/2008 (H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
CY040471.1 Influenza A virus (A/swine/Iowa/63607-23/2008(H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
CY040466.1 Influenza A virus (A/swine/Iowa/225-8/2008(H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
FJ986621.1 Influenza A virus (A/Ohio/02/2007(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
FJ986620.1 Influenza A virus (A/Ohio/01/2007(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
EU604689.1 Influenza A virus (A/swine/OH/511445/2007(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
EU409960.1 Influenza A virus (A/swine/Ohio/C62006/2006(H1N1)) hemagglutinin (HA) gene, partial cds 343 343 100% 3e-91 93%
EU409948.1 Influenza A virus (A/swine/Ohio/24366/2007(H1N1)) hemagglutinin (HA) gene, partial cds 343 343 100% 3e-91 93%
AF342821.1 Influenza A virus (A/Wisconsin/10/98 (H1N1)) heamagglutinin precursor, gene, partial cds 343 343 100% 3e-91 93%
CY040483.1 Influenza A virus (A/swine/Minnesota/63607-26/2008(H1N1)) segment 4 sequence 339 339 100% 5e-90 92%
CY086747.1 Influenza A virus (A/swine/Hong Kong/1472/2004(H1N2)) hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
CY086743.1 Influenza A virus (A/swine/Hong Kong/1441/2004(H1N2)) hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
JF312070.1 Influenza A virus (A/swine/Iowa/A01057153/2010(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
HM461818.1 Influenza A virus (A/swine/North Carolina/02023/2008(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
HM804853.1 Influenza A virus (A/swine/SD/1/2010(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
GU817055.1 Influenza A virus (A/swine/Minnesota/02950/2009(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
CY040595.1 Influenza A virus (A/swine/North Carolina/9856/2003(H1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040593.1 Influenza A virus (A/swine/North Carolina/44888/2003(H1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040576.1 Influenza A virus (A/swine/North Carolina/38767/2003(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040569.1 Influenza A virus (A/swine/North Carolina/34562/2003(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040557.1 Influenza A virus (A/swine/North Carolina/47437/2003(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040547.1 Influenza A virus (A/swine/North Carolina/43110/2003(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040510.1 Influenza A virus (A/swine/Ohio/63607-32/2008(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040505.1 Influenza A virus (A/swine/North Carolina/63607-37/2008(H1N1)) segment 4 sequence 335 335 98% 8e-89 93%
CY040502.1 Influenza A virus (A/swine/North Carolina/63607-25/2008(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040495.1 Influenza A virus (A/swine/North Carolina/225-13/2008(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040490.1 Influenza A virus (A/swine/Minnesota/63607-40/2008(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040486.1 Influenza A virus (A/swine/Minnesota/63607-31/2008 (H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040468.1 Influenza A virus (A/swine/Iowa/63607-1/2008 (H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040461.1 Influenza A virus (A/swine/Illinois/225-1/2008(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
EU409955.1 Influenza A virus (A/swine/Ohio/75004/2004(H1N1)) hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
EU139830.1 Influenza A virus (A/swine/Minnesota/00194/2003(H1N2)) hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
EU139828.1 Influenza A virus (A/swine/Minnesota/1192/2001(H1N2)) hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
AY060048.1 Influenza A virus (A/SW/MN/23124-S/01(H1N2)) hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
AY060047.1 Influenza A virus (A/SW/MN/23124-T/01(H1N2)) hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
AY060045.1 Influenza A virus (A/SW/OH/7802/00(H1N2)) hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
AY060044.1 Influenza A virus (A/SW/NE/18339/01(H1N2)) hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
AF455682.1 Influenza A virus (A/Swine/Illinois/100084/01 (H1N2)) hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
AF455681.1 Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2)) hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
CY040504.1 Influenza A virus (A/swine/North Carolina/63607-28/2008(H1N1)) segment 4 sequence 329 329 95% 5e-87 93%
CY040494.1 Influenza A virus (A/swine/North Carolina/225-12/2008(H1N1)) segment 4 sequence 329 329 95% 5e-87 93%
EU798787.1 Influenza A virus (A/swine/Korea/PZ14/2006(H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 329 329 98% 5e-87 92%
EU798786.1 Influenza A virus (A/swine/Korea/PZ7/2006(H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 329 329 98% 5e-87 92%
EU798785.1 Influenza A virus (A/swine/Korea/PZ4/2006(H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 329 329 98% 5e-87 92%
DQ666944.1 Influenza A virus (A/swine/Korea/S15/2006(H1N2)) segment 4 hemagglutinin gene, partial cds 329 329 95% 5e-87 93%
DQ666941.1 Influenza A virus (A/swine/Korea/S14/2006(H1N2)) segment 4 hemagglutinin gene, partial cds 329 329 95% 5e-87 93%
DQ666925.1 Influenza A virus (A/swine/Korea/S5/2005(H1N2)) segment 4 hemagglutinin gene, partial cds 329 329 95% 5e-87 93%
CY086685.1 Influenza A virus (A/swine/Hong Kong/40/2004(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY086675.1 Influenza A virus (A/swine/Hong Kong/17/2004(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY086673.1 Influenza A virus (A/swine/Hong Kong/NS44/2004(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY086671.1 Influenza A virus (A/swine/Hong Kong/NS10/2004(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY086507.1 Influenza A virus (A/swine/Hong Kong/1822/2002(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY086499.1 Influenza A virus (A/swine/Hong Kong/1742/2002(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY086493.1 Influenza A virus (A/swine/Hong Kong/1720/2002(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY085622.1 Influenza A virus (A/swine/Hong Kong/NS30/2004(H1N2)) hemagglutinin (HA) gene, complete cds 327 327 100% 2e-86 92%
HM193851.1 Influenza A virus (A/swine/Iowa/02999/2010(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 327 327 100% 2e-86 92%
GQ229365.1 Influenza A virus (A/swine/Hong Kong/NS623/2002(H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 327 327 100% 2e-86 92%
CY040603.1 Influenza A virus (A/swine/North Carolina/48718/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040602.1 Influenza A virus (A/swine/North Carolina/47754/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040601.1 Influenza A virus (A/swine/North Carolina/45090/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040600.1 Influenza A virus (A/swine/North Carolina/44885/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040599.1 Influenza A virus (A/swine/North Carolina/44275/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040591.1 Influenza A virus (A/swine/North Carolina/43506/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040586.1 Influenza A virus (A/swine/North Carolina/12866/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040573.1 Influenza A virus (A/swine/North Carolina/26292/2003(H1N1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040571.1 Influenza A virus (A/swine/North Carolina/12869/2003(H1N1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040563.1 Influenza A virus (A/swine/North Carolina/43904/2003(H1N1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040555.1 Influenza A virus (A/swine/North Carolina/46858/2003(H1N1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040543.1 Influenza A virus (A/swine/North Carolina/7386/2004(H1N1)) segment 4 sequence 327 327 100% 2e-86 92%
AY060031.1 Influenza A virus (A/SW/MN/12883/00(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 98% 2e-86 92%
AY060030.1 Influenza A virus (A/SW/AR/12491/00(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
HM570055.1 Influenza A virus (A/swine/Minnesota/03022/2010(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 325 325 94% 7e-86 93%
CY086505.1 Influenza A virus (A/swine/Hong Kong/1821/2002(H1N2)) hemagglutinin (HA) gene, partial cds 323 323 95% 3e-85 92%
EU224366.1 Influenza A virus (A/swine/Korea/GC0502/2005(H1N2)) hemagglutinin (HA) gene, partial cds 323 323 83% 3e-85 95%

_________________
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Top 100 NA matches

JF346736.1 Influenza A virus (A/swine/Korea/4940/2010(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 630 630 100% 1e-177 100%
JF346734.1 Influenza A virus (A/swine/Korea/4456/2009(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 630 630 100% 1e-177 100%
JF346733.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 630 630 100% 1e-177 100%
JF346730.1 Influenza A virus (A/swine/Korea/4372/2009(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 630 630 100% 1e-177 100%
JF346738.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 622 622 100% 3e-175 99%
JF346735.1 Influenza A virus (A/swine/Korea/4779/2010(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 622 622 100% 3e-175 99%
EU798825.1 Influenza A virus (A/swine/Korea/PZ4/2006(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 543 543 100% 2e-151 96%
EU798824.1 Influenza A virus (A/swine/Korea/Asan04/2006(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 543 543 100% 2e-151 96%
EU798821.1 Influenza A virus (A/swine/Korea/JL01/2005(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 543 543 100% 2e-151 96%
EU798823.1 Influenza A virus (A/swine/Korea/JL04/2005(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 535 535 100% 6e-149 96%
EU798820.1 Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 535 535 100% 6e-149 96%
EU798828.1 Influenza A virus (A/swine/Korea/CY08/2007(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 527 527 100% 1e-146 95%
EU798827.1 Influenza A virus (A/swine/Korea/PZ14/2006(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 527 527 100% 1e-146 95%
EU798826.1 Influenza A virus (A/swine/Korea/PZ7/2006(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 527 527 100% 1e-146 95%
EU798822.1 Influenza A virus (A/swine/Korea/JL02/2005(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 527 527 100% 1e-146 95%
GU135927.1 Influenza A virus (A/swine/Iowa/H03HO7/2003(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 511 511 100% 8e-142 95%
AY129157.1 Influenza A virus (A/Swine/Korea/CY02/02(H1N2)) neuraminidase (NA) mRNA, complete cds 511 511 100% 8e-142 95%
CY041881.1 Influenza A virus (A/mallard/South Dakota/Sg-00128/2007(H3N2)) segment 6 sequence 504 504 100% 2e-139 94%
CY041873.1 Influenza A virus (A/mallard/South Dakota/Sg-00127/2007(H3N2)) segment 6 sequence 504 504 100% 2e-139 94%
CY041865.1 Influenza A virus (A/northern pintail/South Dakota/Sg-00126/2007(H3N2)) segment 6 sequence 504 504 100% 2e-139 94%
CY041857.1 Influenza A virus (A/mallard/South Dakota/Sg-00125/2007(H3N2)) segment 6 sequence 504 504 100% 2e-139 94%
EU139840.1 Influenza A virus (A/swine/Minnesota/00194/2003(H1N2)) neuraminidase (NA) gene, partial cds 504 504 100% 2e-139 94%
AF455698.1 Influenza A virus (A/Swine/Illinois/100084/01 (H1N2)) neuraminidase (NA) gene, complete cds 504 504 100% 2e-139 94%
AF455697.1 Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2)) neuraminidase (NA) gene, complete cds 504 504 100% 2e-139 94%
AF153237.1 Influenza A virus (A/Swine/Texas/4199-2/98 (H3N2)) neuraminidase gene, partial cds 504 504 100% 2e-139 94%
GU135893.1 Influenza A virus (A/swine/Iowa/H03BF5/2003(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 496 496 100% 5e-137 94%
DQ666946.1 Influenza A virus (A/swine/Korea/S15/2006(H1N2)) segment 6 neuraminidase gene, complete cds 496 496 100% 5e-137 94%
DQ666943.1 Influenza A virus (A/swine/Korea/S14/2006(H1N2)) segment 6 neuraminidase gene, complete cds 496 496 100% 5e-137 94%
AY233391.1 Influenza A virus (A/duck/NC/91347/01(H1N2)) neuraminidase (NA) gene, complete cds 496 496 100% 5e-137 94%
AF455695.1 Influenza A virus (A/Swine/Iowa/930/01(H1N2)) neuraminidase (NA) gene, complete cds 496 496 100% 5e-137 94%
AF455694.1 Influenza A virus (A/Swine/Minnesota/55551/00 (H1N2)) neuraminidase (NA) gene, complete cds 496 496 100% 5e-137 94%
AF268140.1 Influenza A virus (A/Swine/Oklahoma/18089/99(H3N2)) neuraminidase protein gene, partial cds 496 496 100% 5e-137 94%
AF268137.1 Influenza A virus (A/Swine/Wisconsin/14094/99(H3N2)) neuraminidase protein gene, partial cds 496 496 100% 5e-137 94%
AF268135.1 Influenza A virus (A/Swine/Illinois/21587/99(H3N2)) neuraminidase protein gene, partial cds 496 496 100% 5e-137 94%
AF250126.1 Influenza A virus (A/Swine/Indiana/9K035/99 (H1N2)) neuraminidase (NA) gene, complete cds 496 496 100% 5e-137 94%
AF153238.1 Influenza A virus (A/Swine/Minnesota/9088-2/98 (H3N2)) neuraminidase gene, partial cds 496 496 100% 5e-137 94%
AF268136.1 Influenza A virus (A/Swine/Oklahoma/18717/99(H3N2)) neuraminidase protein gene, partial cds 494 494 99% 2e-136 94%
CY040525.1 Influenza A virus (A/swine/Minnesota/5547/2005(H3N2)) segment 6 sequence 492 492 100% 8e-136 94%
CY086898.1 Influenza A virus (A/swine/North Carolina/226125/2010(H1N2)) neuraminidase (NA) gene, complete cds 488 488 100% 1e-134 94%
AF455691.1 Influenza A virus (A/Swine/Ohio/891/01(H1N2)) neuraminidase (NA) gene, complete cds 488 488 100% 1e-134 94%
AF268139.1 Influenza A virus (A/Swine/NorthCarolina/16497/99(H3N2)) neuraminidase protein gene, partial cds 488 488 100% 1e-134 94%
CY086906.1 Influenza A virus (A/swine/North Carolina/226126/2010(H1N2)) neuraminidase (NA) gene, complete cds 482 482 100% 7e-133 94%
CY086890.1 Influenza A virus (A/swine/North Carolina/226124/2010(H1N2)) neuraminidase (NA) gene, complete cds 482 482 100% 7e-133 94%
JF346737.1 Influenza A virus (A/swine/Korea/4941/2010(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 480 480 100% 3e-132 94%
AF455696.1 Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2)) neuraminidase (NA) gene, complete cds 480 480 100% 3e-132 94%
AF455693.1 Influenza A virus (A/Swine/North Carolina/93523/01 (H1N2)) neuraminidase (NA) gene, complete cds 480 480 100% 3e-132 94%
EU857298.1 Influenza A virus (A/Hong Kong/CUHK4803/1997(H3N2)) neuraminidase (NA) gene, complete cds 478 478 99% 1e-131 94%
EF584348.1 Influenza A virus (A/Minnesota/6/1996(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 478 478 99% 1e-131 94%
CY011418.1 Influenza A virus (A/New York/571/1996(H3N2)) segment 6, complete sequence 478 478 99% 1e-131 94%
CY010022.1 Influenza A virus (A/New York/582/1996(H3N2)) segment 6, complete sequence 478 478 99% 1e-131 94%
AF533996.1 Influenza A virus (A/Buenos Aires/4559/96(H3N2)) neuraminidase (NA) gene, complete cds 478 478 99% 1e-131 94%
CY006461.1 Influenza A virus (A/New York/512/1998(H3N2)) segment 6, complete sequence 478 478 99% 1e-131 94%
CY006277.1 Influenza A virus (A/New York/515/1997(H3N2)) segment 6, complete sequence 478 478 99% 1e-131 94%
GQ229314.1 Influenza A virus (A/swine/Hong Kong/78/2003(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 476 476 100% 5e-131 93%
CY086938.1 Influenza A virus (A/swine/North Carolina/239108/2010(H1N2)) neuraminidase (NA) gene, complete cds 472 472 100% 7e-130 93%
HQ424895.1 Influenza A virus (A/swine/North Carolina/44837-4/2009(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 472 472 100% 7e-130 93%
EU139841.1 Influenza A virus (A/swine/Kansas/00246/2004(H1N2)) neuraminidase (NA) gene, partial cds 472 472 100% 7e-130 93%
EU139838.1 Influenza A virus (A/swine/Minnesota/1192/2001(H1N2)) neuraminidase (NA) gene, partial cds 472 472 100% 7e-130 93%
DQ666927.1 Influenza A virus (A/swine/Korea/S5/2005(H1N2)) segment 6 neuraminidase gene, complete cds 472 472 100% 7e-130 93%
AF251428.2 Influenza A virus (A/Swine/Minnesota/593/99 (H3N2)) neuraminidase (NA) gene, complete cds 472 472 100% 7e-130 93%
AF251412.3 Influenza A virus (A/Swine/Iowa/533/99 (H3N2)) neuraminidase (NA) gene, complete cds 472 472 100% 7e-130 93%
AF455692.1 Influenza A virus (A/Swine/North Carolina/98225/01(H1N2)) neuraminidase (NA) gene, complete cds 472 472 100% 7e-130 93%
AF251420.1 Influenza A virus (A/Swine/Iowa/569/99 (H3N2)) neuraminidase (NA) gene, complete cds 472 472 100% 7e-130 93%
CY085664.1 Influenza A virus (A/swine/Hong Kong/1111/2004(H1N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
GQ229370.1 Influenza A virus (A/swine/Hong Kong/NS623/2002(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857297.1 Influenza A virus (A/Hong Kong/CUHK4622/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857296.1 Influenza A virus (A/Hong Kong/CUHK4542/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857295.1 Influenza A virus (A/Hong Kong/CUHK4529/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857293.1 Influenza A virus (A/Hong Kong/CUHK4391/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857212.1 Influenza A virus (A/Hong Kong/CUHK22736/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857208.1 Influenza A virus (A/Hong Kong/CUHK22185/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857202.1 Influenza A virus (A/Hong Kong/CUHK22048/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857182.1 Influenza A virus (A/Hong Kong/CUHK20731/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857175.1 Influenza A virus (A/Hong Kong/CUHK20217/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857174.1 Influenza A virus (A/Hong Kong/CUHK20213/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857169.1 Influenza A virus (A/Hong Kong/CUHK20010/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857130.1 Influenza A virus (A/Hong Kong/CUHK12626/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857126.1 Influenza A virus (A/Hong Kong/CUHK12563/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EU857107.1 Influenza A virus (A/Hong Kong/CUHK10632/1998(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EF584366.1 Influenza A virus (A/Athens/23/97 (H3N2)) segment 6 neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EF584363.1 Influenza A virus (A/Sydney/16/1997(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EF584356.1 Influenza A virus (A/Victoria/106/1997(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
CY015518.1 Influenza A virus (A/New York/601/1996(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY011266.1 Influenza A virus (A/New York/559/1996(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY010606.1 Influenza A virus (A/New York/561/1996(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY009494.1 Influenza A virus (A/New York/570/1996(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY010062.1 Influenza A virus (A/New York/596/1996(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY010054.1 Influenza A virus (A/New York/595/1996(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY010006.1 Influenza A virus (A/New York/563/1996(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY009662.1 Influenza A virus (A/New York/568/1996(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY009486.1 Influenza A virus (A/New York/569/1997(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
AF533998.1 Influenza A virus (A/Buenos Aires/32/96(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
AF533997.1 Influenza A virus (A/Buenos Aires/4634/96(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
AF533995.1 Influenza A virus (A/Buenos Aires/4459/96(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
CY008926.1 Influenza A virus (A/New York/504/1998(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY008934.1 Influenza A virus (A/New York/507/1997(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY008942.1 Influenza A virus (A/New York/514/1998(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY008958.1 Influenza A virus (A/New York/530/1998(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY008974.1 Influenza A virus (A/New York/549/1998(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY008534.1 Influenza A virus (A/New York/544/1998(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%

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Top 100 PB2 matches

JF346716.1 Influenza A virus (A/swine/Korea/4456/2009(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 1100 1100 100% 0.0 100%
JF346715.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 1100 1100 100% 0.0 100%
JF346720.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 1092 1092 100% 0.0 99%
JF346713.1 Influenza A virus (A/swine/Korea/4381/2009(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 1092 1092 100% 0.0 99%
JF346712.1 Influenza A virus (A/swine/Korea/4372/2009(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 1084 1084 100% 0.0 99%
EU798926.1 Influenza A virus (A/swine/Korea/PZ7/2006(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 1021 1021 100% 0.0 98%
EU798927.1 Influenza A virus (A/swine/Korea/PZ14/2006(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 1013 1013 100% 0.0 98%
EU798922.1 Influenza A virus (A/swine/Korea/JL02/2005(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 1013 1013 100% 0.0 98%
EU798925.1 Influenza A virus (A/swine/Korea/PZ4/2006(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 1005 1005 100% 0.0 97%
GU135864.1 Influenza A virus (A/swine/Iowa/H02NJ56371/2002(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 989 989 99% 0.0 97%
GU135872.1 Influenza A virus (A/swine/Iowa/H02NJ56391/2002(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 989 989 99% 0.0 97%
GU135907.1 Influenza A virus (A/swine/Iowa/H03G1/2003(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 989 989 99% 0.0 97%
GU135923.1 Influenza A virus (A/swine/Iowa/H03HO7/2003(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 981 981 99% 0.0 97%
GU135962.1 Influenza A virus (A/swine/Iowa/H03US3/2003(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 981 981 99% 0.0 97%
HM125972.1 Influenza A virus (A/swine/MN/48683/2002(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 981 981 99% 0.0 97%
GU135888.1 Influenza A virus (A/swine/Iowa/H03BF5/2003(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 975 975 98% 0.0 97%
GU135896.1 Influenza A virus (A/swine/Iowa/H02AS8/2002(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 973 973 99% 0.0 97%
GU135954.1 Influenza A virus (A/swine/Iowa/H03LS4/2003(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 973 973 99% 0.0 97%
GQ452242.1 Influenza A virus (A/swine/Iowa/H04YS2/2004(H1N1)) segment 1 polymerase PB2 (PB2) gene, partial cds 973 973 99% 0.0 97%
FJ461607.1 Influenza A virus (A/swine/Korea/C13/2008(H5N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 973 973 100% 0.0 97%
GU135970.1 Influenza A virus (A/swine/Iowa/H03UWF2/2003(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 969 969 99% 0.0 97%
GU135880.1 Influenza A virus (A/swine/Iowa/H02PW7/2002(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 965 965 99% 0.0 97%
EU798924.1 Influenza A virus (A/swine/Korea/Asan04/2006(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 965 965 99% 0.0 97%
EU798923.1 Influenza A virus (A/swine/Korea/JL04/2005(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 965 965 99% 0.0 97%
EU798921.1 Influenza A virus (A/swine/Korea/JL01/2005(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 965 965 99% 0.0 97%
EU798920.1 Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 965 965 99% 0.0 97%
DQ923521.1 Influenza A virus (A/swine/Korea/CN22/2006(H3N1)) polymerase basic protein 2 (PB2) gene, complete cds 965 965 100% 0.0 96%
DQ280213.1 Influenza A virus (A/swine/Ontario/53518/03(H1N1)) polymerase subunit PB2 (PB2) gene, complete cds 965 965 99% 0.0 97%
AY129163.1 Influenza A virus (A/Swine/Korea/CY02/02(H1N2)) polymerase subunit 2 (PB2) mRNA, complete cds 965 965 99% 0.0 97%
GU135946.1 Influenza A virus (A/swine/Iowa/H03LJ10/2003(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 961 961 99% 0.0 96%
GU135938.1 Influenza A virus (A/swine/Iowa/H03LDH5/2003(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 957 957 99% 0.0 96%
EU409953.1 Influenza A virus (A/swine/Ohio/75004/2004(H1N1)) polymerase PB2 (PB2) gene, complete cds 957 957 99% 0.0 96%
DQ889682.1 Influenza A virus (A/Iowa/CEID23/2005(H1N1)) polymerase PB2 (PB2) gene, complete cds 957 957 99% 0.0 96%
DQ923520.1 Influenza A virus (A/swine/Korea/PZ72-1/2006(H3N1)) polymerase basic protein 2 (PB2) gene, complete cds 957 957 100% 0.0 96%
AF455737.1 Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2)) polymerase subunit (PB2) gene, complete cds 957 957 99% 0.0 96%
DQ469995.1 Influenza A virus (A/turkey/Ontario/31232/2005(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 950 950 99% 0.0 96%
DQ469987.1 Influenza A virus (A/swine/Ontario/33853/2005(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 950 950 99% 0.0 96%
DQ469971.1 Influenza A virus (A/swine/British Columbia/28103/2005(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 950 950 99% 0.0 96%
DQ469955.1 Influenza A virus (A/Ontario/RV1273/2005(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 950 950 99% 0.0 96%
DQ150430.1 Influenza A virus (A/swine/IN/PU542/04 (H3N1)) polymerase (PB2) gene, complete cds 950 950 99% 0.0 96%
GU135930.1 Influenza A virus (A/swine/Iowa/H03HS5/2003(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 942 942 99% 0.0 96%
FJ410137.1 Influenza A virus (A/swine/Minnesota/1145/2007(H3N2)) segment 1, complete sequence 942 942 99% 0.0 96%
EU826550.2 Influenza A virus (A/swine/Quebec/4001/2005(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 942 942 99% 0.0 96%
EU798919.1 Influenza A virus (A/swine/Korea/CAS08/2005(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 942 942 99% 0.0 96%
EF551042.1 Influenza A virus (A/turkey/Illinois/2004(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 942 942 99% 0.0 96%
DQ469979.1 Influenza A virus (A/swine/Manitoba/12707/2005(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 942 942 99% 0.0 96%
DQ145540.1 Influenza A virus (A/swine/Minnesota/00395/2004(H3N1)) PB2 gene, complete cds 942 942 99% 0.0 96%
AF455738.1 Influenza A virus (A/Swine/Illinois/100084/01 (H1N2)) polymerase subunit (PB2) gene, complete cds 942 942 99% 0.0 96%
HM461759.1 Influenza A virus (A/swine/Minnesota/02053/2008(H1N1)) segment 1 polymerase PB2 (PB2) gene, partial cds 934 934 99% 0.0 96%
CY045564.1 Influenza A virus (A/swine/Oklahoma/008722/2007(H3N2)) segment 1 sequence 934 934 99% 0.0 96%
EU826558.2 Influenza A virus (A/mink/Nova Scotia/1055488/2007(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 934 934 99% 0.0 96%
EU735825.1 Influenza A virus (A/turkey/OH/313053/2004(H3N2)) polymerase PB2 (PB2) gene, complete cds 934 934 99% 0.0 96%
EU258942.1 Influenza A virus (A/swine/Missouri/2124514/2006(H2N3)) segment 1, complete sequence 934 934 99% 0.0 96%
DQ469963.1 Influenza A virus (A/swine/Alberta/14722/2005(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 934 934 99% 0.0 96%
DQ335778.1 Influenza A virus (A/turkey/Ohio/313053/04(H3N2)) polymerase PB2 (PB2) gene, complete cds 934 934 99% 0.0 96%
FJ638311.1 Influenza A virus (A/swine/IL/07003243/2007(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 926 926 99% 0.0 96%
CY035439.1 Influenza A virus (A/swine/Minnesota/SG-00242/2006(H3N2)) segment 1 sequence 926 926 99% 0.0 96%
CY035420.1 Influenza A virus (A/swine/Minnesota/SG-00236/2007(H3N2)) segment 1 sequence 926 926 99% 0.0 96%
CY035417.1 Influenza A virus (A/swine/Minnesota/SG-00235/2007(H3N2)) segment 1 sequence 926 926 99% 0.0 96%
EU798918.1 Influenza A virus (A/swine/Korea/CAN01/2004(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 926 926 99% 0.0 96%
EU735833.1 Influenza A virus (A/turkey/NC/353568/2005(H3N2)) polymerase PB2 (PB2) gene, complete cds 926 926 99% 0.0 96%
EU399758.1 Influenza A virus (A/Ontario/1252/2007(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 926 926 99% 0.0 96%
EU258950.1 Influenza A virus (A/swine/Missouri/4296424/2006(H2N3)) segment 1, complete sequence 926 926 99% 0.0 96%
HM461791.1 Influenza A virus (A/swine/Minnesota/02093/2008(H1N1)) segment 1 polymerase PB2 (PB2) gene, partial cds 918 918 99% 0.0 96%
CY033794.2 Influenza A virus (A/mallard/South Dakota/Sg-00128/2007(H3N2)) segment 1 sequence 918 918 99% 0.0 96%
CY032880.2 Influenza A virus (A/mallard/South Dakota/Sg-00127/2007(H3N2)) segment 1 sequence 918 918 99% 0.0 96%
CY032879.2 Influenza A virus (A/northern pintail/South Dakota/Sg-00126/2007(H3N2)) segment 1 sequence 918 918 99% 0.0 96%
CY032878.2 Influenza A virus (A/mallard/South Dakota/Sg-00125/2007(H3N2)) segment 1 sequence 918 918 99% 0.0 96%
FJ638303.1 Influenza A virus (A/swine/NC/00573/2005(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 918 918 99% 0.0 96%
CY035414.1 Influenza A virus (A/swine/Minnesota/SG-00234/2005(H3N2)) segment 1 sequence 918 918 99% 0.0 96%
EU743217.1 Influenza A virus (A/turkey/MN/366767/2005(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 918 918 99% 0.0 96%
EU409958.1 Influenza A virus (A/swine/Ohio/C62006/2006(H1N1)) polymerase PB2 (PB2) gene, partial cds 918 918 99% 0.0 96%
GQ457546.1 Influenza A virus (A/Saskatchewan/5351/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 910 910 99% 0.0 95%
GQ457545.1 Influenza A virus (A/Saskatchewan/5350/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 910 910 99% 0.0 95%
GQ457544.1 Influenza A virus (A/Saskatchewan/5131/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 910 910 99% 0.0 95%
FJ611896.1 Influenza A virus (A/swine/Minnesota/07002083/2007(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 910 910 99% 0.0 95%
FJ638295.1 Influenza A virus (A/swine/IL/00685/2005(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 910 910 99% 0.0 95%
CY035433.1 Influenza A virus (A/swine/Minnesota/SG-00240/2007(H1N1)) segment 1 sequence 910 910 99% 0.0 95%
CY035427.1 Influenza A virus (A/swine/Minnesota/SG-00238/2006(H1N1)) segment 1 sequence 910 910 99% 0.0 95%
EF551050.1 Influenza A virus (A/swine/North Carolina/2003(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 910 910 99% 0.0 95%
DQ150422.1 Influenza A virus (A/swine/MI/PU243/04 (H3N1)) polymerase (PB2) gene, complete cds 910 910 99% 0.0 95%
CY035436.1 Influenza A virus (A/swine/Minnesota/SG-00241/2007(H1N1)) segment 1 sequence 902 902 99% 0.0 95%
EU301177.2 Influenza A virus (A/swine/Korea/JNS06/2004(H3N2)) polymerase PB2 (PB2) gene, complete cds 902 902 99% 0.0 95%
AF455736.1 Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2)) polymerase subunit (PB2) gene, complete cds 902 902 99% 0.0 95%
HM461767.1 Influenza A virus (A/swine/Iowa/02039/2008(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 894 894 99% 0.0 95%
HM461783.1 Influenza A virus (A/swine/Kentucky/02086/2008(H1N1)) segment 1 polymerase PB2 (PB2) gene, partial cds 894 894 99% 0.0 95%
HM461839.1 Influenza A virus (A/swine/Iowa/02096/2008(H1N1)) segment 1 polymerase PB2 (PB2) gene, partial cds 894 894 99% 0.0 95%
CY045684.1 Influenza A virus (A/swine/Oklahoma/020734-3/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045668.1 Influenza A virus (A/swine/Oklahoma/016179-9/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045660.1 Influenza A virus (A/swine/Oklahoma/016179-8/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045652.1 Influenza A virus (A/swine/Oklahoma/011521-4/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045644.1 Influenza A virus (A/swine/Oklahoma/011521-5/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045636.1 Influenza A virus (A/swine/Oklahoma/011289-8/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045628.1 Influenza A virus (A/swine/Oklahoma/011289-10/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045620.1 Influenza A virus (A/swine/Oklahoma/011289-9/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045612.1 Influenza A virus (A/swine/Oklahoma/010710-8/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045604.1 Influenza A virus (A/swine/Oklahoma/010710-9/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY035423.1 Influenza A virus (A/swine/Minnesota/SG-00237/2007(H3N2)) segment 1 sequence 894 894 99% 0.0 95%
AF455733.1 Influenza A virus (A/Swine/North Carolina/93523/01 (H1N2)) polymerase subunit (PB2) gene, complete cds 894 894 99% 0.0 95%
JF346717.1 Influenza A virus (A/swine/Korea/4779/2010(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 886 886 99% 0.0 95%

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Top 100 PB1 matches

JF346702.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 2 polymerase PB1 (PB1) gene, partial cds 1011 1011 100% 0.0 100%
JF346698.1 Influenza A virus (A/swine/Korea/4456/2009(H1N2)) segment 2 polymerase PB1 (PB1) gene, partial cds 1011 1011 100% 0.0 100%
JF346697.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 2 polymerase PB1 (PB1) gene, partial cds 1011 1011 100% 0.0 100%
JF346694.1 Influenza A virus (A/swine/Korea/4372/2009(H1N2)) segment 2 polymerase PB1 (PB1) gene, partial cds 1011 1011 100% 0.0 100%
EU798908.1 Influenza A virus (A/swine/Korea/CY08/2007(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 932 932 100% 0.0 98%
EU798907.1 Influenza A virus (A/swine/Korea/PZ14/2006(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 932 932 100% 0.0 98%
EU798906.1 Influenza A virus (A/swine/Korea/PZ7/2006(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 932 932 100% 0.0 98%
EU798902.1 Influenza A virus (A/swine/Korea/JL02/2005(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 932 932 100% 0.0 98%
EU798905.1 Influenza A virus (A/swine/Korea/PZ4/2006(H1N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 926 926 99% 0.0 98%
AY129162.1 Influenza A virus (A/Swine/Korea/CY02/02(H1N2)) polymerase subunit 1 (PB1) mRNA, complete cds 900 900 100% 0.0 97%
AF455729.1 Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2)) polymerase subunit (PB1) gene, complete cds 892 892 100% 0.0 97%
CY033790.2 Influenza A virus (A/mallard/South Dakota/Sg-00125/2007(H3N2)) segment 2 sequence 884 884 100% 0.0 96%
CY041877.1 Influenza A virus (A/mallard/South Dakota/Sg-00128/2007(H3N2)) segment 2 sequence 884 884 100% 0.0 96%
CY041869.1 Influenza A virus (A/mallard/South Dakota/Sg-00127/2007(H3N2)) segment 2 sequence 884 884 100% 0.0 96%
CY041861.1 Influenza A virus (A/northern pintail/South Dakota/Sg-00126/2007(H3N2)) segment 2 sequence 884 884 100% 0.0 96%
EU798904.1 Influenza A virus (A/swine/Korea/Asan04/2006(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 884 884 100% 0.0 96%
EU798903.1 Influenza A virus (A/swine/Korea/JL04/2005(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 884 884 100% 0.0 96%
EU798901.1 Influenza A virus (A/swine/Korea/JL01/2005(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 884 884 100% 0.0 96%
EU798900.1 Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 884 884 100% 0.0 96%
HM765430.1 Influenza A virus (A/swine/Heilongjiang/10/2007(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 876 876 100% 0.0 96%
EU301400.2 Influenza A virus (A/swine/Korea/JNS06/2004(H3N2)) polymerase PB1 (PB1) gene, complete cds 876 876 100% 0.0 96%
EU798912.1 Influenza A virus (A/swine/Korea/CAS09/2006(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 876 876 100% 0.0 96%
AF455724.1 Influenza A virus (A/Swine/North Carolina/98225/01(H1N2)) polymerase subunit (PB1) gene, complete cds 876 876 100% 0.0 96%
AF342823.1 Influenza A virus (A/Wisconsin/10/98 (H1N1)) PB1 gene, complete cds 876 876 100% 0.0 96%
AF251429.1 Influenza A virus (A/Swine/Minnesota/593/99 (H3N2)) PB1 polymerase subunit (PB1) gene, complete cds 876 876 100% 0.0 96%
AF251421.1 Influenza A virus (A/Swine/Iowa/569/99 (H3N2)) PB1 polymerase subunit (PB1) gene, complete cds 876 876 100% 0.0 96%
AF251413.1 Influenza A virus (A/Swine/Iowa/533/99 (H3N2)) PB1 polymerase subunit (PB1) gene, complete cds 876 876 100% 0.0 96%
AF251405.1 Influenza A virus (A/Swine/Nebraska/209/98 (H3N2)) PB1 polymerase subunit (PB1) gene, complete cds 876 876 100% 0.0 96%
AY060181.1 Influenza A virus (A/SW/MO/1877/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 872 872 98% 0.0 96%
HM461784.1 Influenza A virus (A/swine/Kentucky/02086/2008(H1N1)) segment 2 polymerase PB1 (PB1) gene, partial cds 868 868 100% 0.0 96%
EU798916.1 Influenza A virus (A/swine/Korea/CY09/2007(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 868 868 100% 0.0 96%
EU798914.1 Influenza A virus (A/swine/Korea/CY05/2007(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 868 868 100% 0.0 96%
EU798913.1 Influenza A virus (A/swine/Korea/CY04/2007(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 868 868 100% 0.0 96%
EU798911.1 Influenza A virus (A/swine/Korea/CAS07/2005(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 868 868 100% 0.0 96%
EU798910.1 Influenza A virus (A/swine/Korea/CAN04/2005(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 868 868 100% 0.0 96%
DQ923519.1 Influenza A virus (A/swine/Korea/CN22/2006(H3N1)) polymerase basic protein 1 (PB1) gene, complete cds 868 868 100% 0.0 96%
DQ923518.1 Influenza A virus (A/swine/Korea/PZ72-1/2006(H3N1)) polymerase basic protein 1 (PB1) gene, complete cds 868 868 100% 0.0 96%
AF455730.1 Influenza A virus (A/Swine/Illinois/100084/01 (H1N2)) polymerase subunit (PB1) gene, complete cds 868 868 100% 0.0 96%
AF455728.1 Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2)) polymerase subunit (PB1) gene, complete cds 868 868 99% 0.0 96%
AF455723.1 Influenza A virus (A/Swine/Ohio/891/01(H1N2)) polymerase subunit (PB1) gene, complete cds 868 868 100% 0.0 96%
GU135881.1 Influenza A virus (A/swine/Iowa/H02PW7/2002(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 860 860 100% 0.0 96%
GU135947.1 Influenza A virus (A/swine/Iowa/H03LJ10/2003(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 860 860 100% 0.0 96%
GQ452241.1 Influenza A virus (A/swine/Iowa/H04YS2/2004(H1N1)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 860 860 100% 0.0 96%
EU798917.1 Influenza A virus (A/swine/Korea/CY10/2007(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 860 860 99% 0.0 96%
AY233388.1 Influenza A virus (A/duck/NC/91347/01(H1N2)) polymerase subunit PB1 (PB1) gene, complete cds 860 860 100% 0.0 96%
AF455727.1 Influenza A virus (A/Swine/Iowa/930/01(H1N2)) polymerase subunit (PB1) gene, complete cds 860 860 99% 0.0 96%
AF250130.1 Influenza A virus (A/Swine/Indiana/9K035/99 (H1N2)) polymerase subunit PB1 (PB1) gene, complete cds 860 860 100% 0.0 96%
AY060196.1 Influenza A virus (A/SW/OH/7802/00(H1N2)) polymerase 1 protein (PB1) gene, partial cds 856 856 98% 0.0 96%
AY060195.1 Influenza A virus (A/SW/MN/34893/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 856 856 98% 0.0 96%
AY060174.1 Influenza A virus (A/SW/MN/3227/00(H1N2)) polymerase 1 protein (PB1) gene, partial cds 856 856 98% 0.0 96%
GU135865.1 Influenza A virus (A/swine/Iowa/H02NJ56371/2002(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 852 852 100% 0.0 96%
GU135873.1 Influenza A virus (A/swine/Iowa/H02NJ56391/2002(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 852 852 100% 0.0 96%
GU135889.1 Influenza A virus (A/swine/Iowa/H03BF5/2003(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 852 852 100% 0.0 96%
GU135908.1 Influenza A virus (A/swine/Iowa/H03G1/2003(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 852 852 100% 0.0 96%
EU798909.1 Influenza A virus (A/swine/Korea/CAS05/2004(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 852 852 100% 0.0 96%
DQ469972.1 Influenza A virus (A/swine/British Columbia/28103/2005(H3N2)) polymerase subunit PB1 (PB1) gene, complete cds 852 852 99% 0.0 96%
DQ145544.1 Influenza A virus (A/swine/Minnesota/00395/2004(H3N1)) PB1 gene, complete cds 852 852 100% 0.0 96%
AF455726.1 Influenza A virus (A/Swine/Minnesota/55551/00 (H1N2)) polymerase subunit (PB1) gene, complete cds 852 852 100% 0.0 96%
AY060194.1 Influenza A virus (A/SW/MN/23124-S/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060193.1 Influenza A virus (A/SW/MN/23124-T/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060192.1 Influenza A virus (A/SW/MN/22860-S/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060191.1 Influenza A virus (A/SW/MN/22860-T/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060184.1 Influenza A virus (A/SW/MN/13130/00(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060183.1 Influenza A virus (A/SW/MN/16356/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060182.1 Influenza A virus (A/SW/NE/21147/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060177.1 Influenza A virus (A/SW/MN/12883/00(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
CY085660.1 Influenza A virus (A/swine/Hong Kong/1111/2004(H1N2)) polymerase PB1 (PB1) gene, partial cds; and PB1-F2 protein (PB1-F2) gene, complete cds 844 844 100% 0.0 95%
GU135897.1 Influenza A virus (A/swine/Iowa/H02AS8/2002(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 844 844 100% 0.0 95%
GU135924.1 Influenza A virus (A/swine/Iowa/H03HO7/2003(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 844 844 100% 0.0 95%
GU135939.1 Influenza A virus (A/swine/Iowa/H03LDH5/2003(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 844 844 99% 0.0 96%
GU135963.1 Influenza A virus (A/swine/Iowa/H03US3/2003(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 844 844 100% 0.0 95%
GQ229364.1 Influenza A virus (A/swine/Hong Kong/NS623/2002(H1N2)) segment 2 polymerase PB1 (PB1) gene, partial cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence 844 844 100% 0.0 95%
EU798915.1 Influenza A virus (A/swine/Korea/CY07/2007(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 844 844 99% 0.0 96%
AY060185.1 Influenza A virus (A/SW/AR/12491/00(H1N2)) polymerase 1 protein (PB1) gene, partial cds 841 841 98% 0.0 96%
CY085604.1 Influenza A virus (A/swine/Hong Kong/1578/2003(H1N2)) polymerase PB1 (PB1) gene, partial cds; and PB1-F2 protein (PB1-F2) gene, complete cds 837 837 100% 0.0 95%
GU135955.1 Influenza A virus (A/swine/Iowa/H03LS4/2003(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 837 837 100% 0.0 95%
GU135971.1 Influenza A virus (A/swine/Iowa/H03UWF2/2003(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 837 837 100% 0.0 95%
HM461760.1 Influenza A virus (A/swine/Minnesota/02053/2008(H1N1)) segment 2 polymerase PB1 (PB1) gene, partial cds 837 837 99% 0.0 95%
FJ638304.1 Influenza A virus (A/swine/NC/00573/2005(H1N1)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 837 837 100% 0.0 95%
CY035415.1 Influenza A virus (A/swine/Minnesota/SG-00234/2005(H3N2)) segment 2 sequence 837 837 99% 0.0 95%
EU798899.1 Influenza A virus (A/swine/Korea/CAS08/2005(H1N1)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 837 837 100% 0.0 95%
EU798898.1 Influenza A virus (A/swine/Korea/CAN01/2004(H1N1)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 837 837 100% 0.0 95%
EU735824.1 Influenza A virus (A/turkey/OH/313053/2004(H3N2)) polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 837 837 99% 0.0 95%
EU409954.1 Influenza A virus (A/swine/Ohio/75004/04(H1N1)) polymerase PB1 (PB1) gene, complete cds 837 837 100% 0.0 95%
EF551051.1 Influenza A virus (A/swine/North Carolina/2003(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 837 837 100% 0.0 95%
CY012222.1 Influenza A virus (A/New York/639/1995(H3N2)) segment 2, complete sequence 837 837 100% 0.0 95%
DQ469996.1 Influenza A virus (A/turkey/Ontario/31232/2005(H3N2)) polymerase subunit PB1 (PB1) gene, complete cds 837 837 99% 0.0 95%
DQ469988.1 Influenza A virus (A/swine/Ontario/33853/2005(H3N2)) polymerase subunit PB1 (PB1) gene, complete cds 837 837 99% 0.0 95%
DQ469964.1 Influenza A virus (A/swine/Alberta/14722/2005(H3N2)) polymerase subunit PB1 (PB1) gene, complete cds 837 837 99% 0.0 95%
DQ469956.1 Influenza A virus (A/Ontario/RV1273/2005(H3N2)) polymerase subunit PB1 (PB1) gene, complete cds 837 837 99% 0.0 95%
CY011822.1 Influenza A virus (A/New York/652/1996(H3N2)) segment 2, complete sequence 837 837 100% 0.0 95%
CY010730.1 Influenza A virus (A/New York/634/1995(H3N2)) segment 2, complete sequence 837 837 100% 0.0 95%
AY779266.1 Influenza A virus (A/turkey/Minnesota/764-2/03(H3N2)) polymerase basic protein 1 (PB1) gene, partial cds 837 837 100% 0.0 95%
AY779265.1 Influenza A virus (A/turkey/North Carolina/12344/03(H3N2)) polymerase basic protein 1 (PB1) gene, partial cds 837 837 100% 0.0 95%
AF455725.1 Influenza A virus (A/Swine/North Carolina/93523/01 (H1N2)) polymerase subunit (PB1) gene, complete cds 837 837 99% 0.0 95%
DQ335777.1 Influenza A virus (A/turkey/Ohio/313053/04(H3N2)) polymerase PB1 (PB1) gene, complete cds 837 837 99% 0.0 95%
U71131.1 Influenza A virus H3N2 A/Miyagi/29/95 PB1 polymerase subunit (PB1) gene, complete cds 837 837 100% 0.0 95%
U71130.1 Influenza A virus H3N2 A/Shiga/20/95 PB1 polymerase subunit (PB1) gene, complete cds 837 837 100% 0.0 95%
AY060187.1 Influenza A virus (A/SW/MN/17138/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 835 835 98% 0.0 95%
AY060197.1 Influenza A virus (A/SW/NC/45319/99(H1N2)) polymerase 1 protein (PB1) gene, partial cds 833 833 98% 0.0 95%

_________________
www.twitter.com/hniman

Top 100 PA matches

JF346711.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 3 polymerase PA (PA) gene, partial cds 630 630 100% 1e-177 100%
JF346708.1 Influenza A virus (A/swine/Korea/4779/2010(H1N2)) segment 3 polymerase PA (PA) gene, partial cds 630 630 100% 1e-177 100%
JF346707.1 Influenza A virus (A/swine/Korea/4456/2009(H1N2)) segment 3 polymerase PA (PA) gene, partial cds 630 630 100% 1e-177 100%
JF346706.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 3 polymerase PA (PA) gene, partial cds 630 630 100% 1e-177 100%
JF346703.1 Influenza A virus (A/swine/Korea/4372/2009(H1N2)) segment 3 polymerase PA (PA) gene, partial cds 630 630 100% 1e-177 100%
EU798884.1 Influenza A virus (A/swine/Korea/Asan04/2006(H1N2)) segment 3 polymerase PA (PA) gene, complete cds 585 585 99% 7e-164 98%
EU798883.1 Influenza A virus (A/swine/Korea/JL04/2005(H1N2)) segment 3 polymerase PA (PA) gene, complete cds 585 585 99% 7e-164 98%
EU798881.1 Influenza A virus (A/swine/Korea/JL01/2005(H1N2)) segment 3 polymerase PA (PA) gene, complete cds 585 585 99% 7e-164 98%
EU798880.1 Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2)) segment 3 polymerase PA (PA) gene, complete cds 583 583 100% 3e-163 98%
AF455715.1 Influenza A virus (A/Swine/Ohio/891/01(H1N2)) polymerase acidic protein 2 (PA) gene, complete cds 583 583 100% 3e-163 98%
GU135874.1 Influenza A virus (A/swine/Iowa/H02NJ56391/2002(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 575 575 100% 7e-161 97%
EU798888.1 Influenza A virus (A/swine/Korea/CY08/2007(H1N2)) segment 3 polymerase PA (PA) gene, complete cds 575 575 100% 7e-161 97%
EU798887.1 Influenza A virus (A/swine/Korea/PZ14/2006(H1N2)) segment 3 polymerase PA (PA) gene, complete cds 575 575 100% 7e-161 97%
EU798886.1 Influenza A virus (A/swine/Korea/PZ7/2006(H1N2)) segment 3 polymerase PA (PA) gene, complete cds 575 575 100% 7e-161 97%
EU798885.1 Influenza A virus (A/swine/Korea/PZ4/2006(H1N2)) segment 3 polymerase PA (PA) gene, complete cds 575 575 100% 7e-161 97%
EU798882.1 Influenza A virus (A/swine/Korea/JL02/2005(H1N2)) segment 3 polymerase PA (PA) gene, complete cds 575 575 100% 7e-161 97%
AF455722.1 Influenza A virus (A/Swine/Illinois/100084/01 (H1N2)) polymerase acidic protein 2 (PA) gene, complete cds 575 575 100% 7e-161 97%
GU135940.1 Influenza A virus (A/swine/Iowa/H03LDH5/2003(H3N2)) segment 3 polymerase PA (PA) gene, complete cds 567 567 100% 2e-158 97%
AY060166.1 Influenza A virus (A/SW/IN/14810-S/01(H1N2)) polymerase A protein (PA) gene, partial cds 567 567 100% 2e-158 97%
AY060165.1 Influenza A virus (A/SW/IN/14810-T/01(H1N2)) polymerase A protein (PA) gene, partial cds 567 567 100% 2e-158 97%
AF455721.1 Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2)) polymerase acidic protein 2 (PA) gene, complete cds 567 567 100% 2e-158 97%
AF268158.1 Influenza A virus (A/Swine/Oklahoma/18717/99(H3N2)) polymerase protein PA gene, partial cds 567 567 100% 2e-158 97%
AF268157.1 Influenza A virus (A/Swine/Oklahoma/18089/99(H3N2)) polymerase protein PA gene, partial cds 567 567 100% 2e-158 97%
AF268156.1 Influenza A virus (A/Swine/Wisconsin/14094/99(H3N2)) polymerase protein PA gene, partial cds 567 567 100% 2e-158 97%
AF268153.1 Influenza A virus (A/Swine/Colorado/23619/99(H3N2)) polymerase protein PA gene, partial cds 567 567 100% 2e-158 97%
AY060152.1 Influenza A virus (A/SW/MN/17138/01(H1N2)) polymerase A protein (PA) gene, partial cds 565 565 98% 6e-158 97%
GU135898.1 Influenza A virus (A/swine/Iowa/H02AS8/2002(H3N2)) segment 3 polymerase PA (PA) gene, complete cds 559 559 100% 4e-156 97%
CY033795.2 Influenza A virus (A/mallard/South Dakota/Sg-00128/2007(H3N2)) segment 3 sequence 559 559 100% 4e-156 97%
CY033793.2 Influenza A virus (A/mallard/South Dakota/Sg-00127/2007(H3N2)) segment 3 sequence 559 559 100% 4e-156 97%
CY033792.2 Influenza A virus (A/northern pintail/South Dakota/Sg-00126/2007(H3N2)) segment 3 sequence 559 559 100% 4e-156 97%
CY033791.2 Influenza A virus (A/mallard/South Dakota/Sg-00125/2007(H3N2)) segment 3 sequence 559 559 100% 4e-156 97%
AY129161.1 Influenza A virus (A/Swine/Korea/CY02/02(H1N2)) polymerase acidic protein 2 (PA) mRNA, complete cds 559 559 100% 4e-156 97%
AF268154.1 Influenza A virus (A/Swine/Illinois/21587/99(H3N2)) polymerase protein PA gene, partial cds 559 559 100% 4e-156 97%
AF268112.1 Influenza A virus (A/Swine/Texas/4199-2/98(H3N2)) polymerase protein PA gene, partial cds 559 559 100% 4e-156 97%
AF251433.1 Influenza A virus (A/Swine/Minnesota/593/99 (H3N2)) polymerase acidic protein 2 (PA) gene, complete cds 559 559 100% 4e-156 97%
AF251425.1 Influenza A virus (A/Swine/Iowa/569/99 (H3N2)) polymerase acidic protein 2 (PA) gene, complete cds 559 559 100% 4e-156 97%
AF251417.1 Influenza A virus (A/Swine/Iowa/533/99 (H3N2)) polymerase acidic protein 2 (PA) gene, complete cds 559 559 100% 4e-156 97%
AF251409.1 Influenza A virus (A/Swine/Nebraska/209/98 (H3N2)) polymerase acidic protein 2 (PA) gene, complete cds 559 559 100% 4e-156 97%
GU051893.1 Influenza A virus (A/equine/North Carolina/152429/2002(H3N8)) segment 3 polymerase PA (PA) gene, complete cds 551 551 100% 1e-153 96%
AY233389.1 Influenza A virus (A/duck/NC/91347/01(H1N2)) acidic protein 2 (PA) gene, complete cds 551 551 100% 1e-153 96%
AF268155.1 Influenza A virus (A/Swine/NorthCarolina/16497/99(H3N2)) polymerase protein PA gene, partial cds 551 551 100% 1e-153 96%
AF250129.1 Influenza A virus (A/Swine/Indiana/9K035/99 (H1N2)) polymerase acidic protein 2 (PA) gene, complete cds 551 551 100% 1e-153 96%
GU135866.1 Influenza A virus (A/swine/Iowa/H02NJ56371/2002(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 543 543 100% 2e-151 96%
GU135917.1 Influenza A virus (A/swine/Iowa/H03HB4/2003(H3N2)) segment 3 polymerase PA (PA) gene, complete cds 543 543 96% 2e-151 97%
EU798889.1 Influenza A virus (A/swine/Korea/CAS05/2004(H3N2)) segment 3 polymerase PA (PA) gene, complete cds 543 543 100% 2e-151 96%
EF551052.1 Influenza A virus (A/swine/North Carolina/2003(H3N2)) segment 3 polymerase PA (PA) gene, complete cds 543 543 100% 2e-151 96%
AF455720.1 Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2)) polymerase acidic protein 2 (PA) gene, complete cds 543 543 100% 2e-151 96%
AF455719.1 Influenza A virus (A/Swine/Iowa/930/01(H1N2)) polymerase acidic protein 2 (PA) gene, complete cds 543 543 100% 2e-151 96%
AF455718.1 Influenza A virus (A/Swine/Minnesota/55551/00 (H1N2)) polymerase acidic protein 2 (PA) gene, complete cds 543 543 100% 2e-151 96%
FJ461603.1 Influenza A virus (A/swine/Korea/C13/2008(H5N2)) segment 3 polymerase PA (PA) gene, complete cds 535 535 100% 6e-149 96%
CY035444.1 Influenza A virus (A/swine/Minnesota/SG-00243/2006(H3N2)) segment 3 sequence 535 535 100% 6e-149 96%
DQ923517.1 Influenza A virus (A/swine/Korea/CN22/2006(H3N1)) polymerase acidic protein (PA) gene, complete cds 535 535 100% 6e-149 96%
DQ923516.1 Influenza A virus (A/swine/Korea/PZ72-1/2006(H3N1)) polymerase acidic protein (PA) gene, complete cds 535 535 100% 6e-149 96%
AY060169.1 Influenza A virus (A/SW/NE/18339/01(H1N2)) polymerase A protein (PA) gene, partial cds 535 535 100% 6e-149 96%
AY060153.1 Influenza A virus (A/SW/AR/12491/00(H1N2)) polymerase A protein (PA) gene, partial cds 533 533 98% 2e-148 96%
AF455716.1 Influenza A virus (A/Swine/North Carolina/98225/01(H1N2)) polymerase acidic protein 2 (PA) gene, complete cds 533 533 98% 2e-148 96%
GU135882.1 Influenza A virus (A/swine/Iowa/H02PW7/2002(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 527 527 100% 1e-146 95%
GU135932.1 Influenza A virus (A/swine/Iowa/H03HS5/2003(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 527 527 100% 1e-146 95%
GU135948.1 Influenza A virus (A/swine/Iowa/H03LJ10/2003(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 527 527 100% 1e-146 95%
CY041846.1 Influenza A virus (A/swine/North Carolina/R08-001877-D08-013371/2008 (H3N2)) segment 3 sequence 527 527 100% 1e-146 95%
GQ229312.1 Influenza A virus (A/swine/Hong Kong/78/2003(H1N2)) segment 3 polymerase PA (PA) gene, complete cds 527 527 96% 1e-146 96%
EU301368.2 Influenza A virus (A/swine/Korea/JNS06/2004(H3N2)) polymerase PA (PA) gene, complete cds 527 527 100% 1e-146 95%
EU798892.1 Influenza A virus (A/swine/Korea/CAS09/2006(H3N2)) segment 3 polymerase PA (PA) gene, complete cds 527 527 100% 1e-146 95%
EU798891.1 Influenza A virus (A/swine/Korea/CAS07/2005(H3N2)) segment 3 polymerase PA (PA) gene, complete cds 527 527 100% 1e-146 95%
EU798890.1 Influenza A virus (A/swine/Korea/CAN04/2005(H3N2)) segment 3 polymerase PA (PA) gene, complete cds 527 527 100% 1e-146 95%
DQ150432.1 Influenza A virus (A/swine/IN/PU542/04 (H3N1)) polymerase (PA) gene, complete cds 527 527 96% 1e-146 96%
AY060162.1 Influenza A virus (A/SW/MN/22860-S/01(H1N2)) polymerase A protein (PA) gene, partial cds 527 527 100% 1e-146 95%
AY060161.1 Influenza A virus (A/SW/MN/22860-T/01(H1N2)) polymerase A protein (PA) gene, partial cds 527 527 100% 1e-146 95%
AY060151.1 Influenza A virus (A/SW/MN/13130/00(H1N2)) polymerase A protein (PA) gene, partial cds 527 527 100% 1e-146 95%
AY060150.1 Influenza A virus (A/SW/MN/12883/00(H1N2)) polymerase A protein (PA) gene, partial cds 527 527 100% 1e-146 95%
AF455717.1 Influenza A virus (A/Swine/North Carolina/93523/01 (H1N2)) polymerase acidic protein 2 (PA) gene, complete cds 527 527 100% 1e-146 95%
AF342822.1 Influenza A virus (A/Wisconsin/10/98 (H1N1)) PA gene, partial cds 521 521 100% 9e-145 95%
CY085661.1 Influenza A virus (A/swine/Hong Kong/1111/2004(H1N2)) polymerase PA (PA) gene, complete cds 519 519 100% 3e-144 95%
CY085621.1 Influenza A virus (A/swine/Hong Kong/NS30/2004(H1N2)) polymerase PA (PA) gene, complete cds 519 519 100% 3e-144 95%
GU135956.1 Influenza A virus (A/swine/Iowa/H03LS4/2003(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 519 519 100% 3e-144 95%
HM461777.1 Influenza A virus (A/swine/Ohio/02026/2008(H1N1)) segment 3 polymerase PA (PA) gene, partial cds 519 519 100% 3e-144 95%
HM461809.1 Influenza A virus (A/swine/Missouri/02060/2008(H1N1)) segment 3 polymerase PA (PA) gene, partial cds 519 519 100% 3e-144 95%
HM189303.1 Influenza A virus (A/swine/Guangdong/1/2010(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 519 519 100% 3e-144 95%
HM125973.1 Influenza A virus (A/swine/MN/48683/2002(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 519 519 100% 3e-144 95%
CY042319.1 Influenza A virus (A/swine/Illinois/Sg-00445/2008(H1N1)) segment 3 sequence 519 519 100% 3e-144 95%
CY042315.1 Influenza A virus (A/swine/Illinois/Sg-00444/2008(H1N1)) segment 3 sequence 519 519 100% 3e-144 95%
CY042311.1 Influenza A virus (A/swine/Illinois/Sg-00443/2008(H1N1)) segment 3 sequence 519 519 100% 3e-144 95%
GQ229368.1 Influenza A virus (A/swine/Hong Kong/NS623/2002(H1N2)) segment 3 polymerase PA (PA) gene, complete cds 519 519 100% 3e-144 95%
EU798879.1 Influenza A virus (A/swine/Korea/CAS08/2005(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 519 519 100% 3e-144 95%
EU798878.1 Influenza A virus (A/swine/Korea/CAN01/2004(H1N1)) segment 3 polymerase PA (PA) gene, complete cds 519 519 100% 3e-144 95%
EU743215.1 Influenza A virus (A/turkey/MN/366767/2005(H3N2)) segment 3 polymerase PA (PA) gene, complete cds 519 519 100% 3e-144 95%
EU735823.1 Influenza A virus (A/turkey/OH/313053/2004(H3N2)) polymerase PA (PA) gene, complete cds 519 519 100% 3e-144 95%
DQ889684.1 Influenza A virus (A/Iowa/CEID23/2005(H1N1)) polymerase PA (PA) gene, complete cds 519 519 100% 3e-144 95%
DQ150424.1 Influenza A virus (A/swine/MI/PU243/04 (H3N1)) polymerase (PA) gene, complete cds 519 519 100% 3e-144 95%
AY060170.1 Influenza A virus (A/SW/MN/34893/01(H1N2)) polymerase A protein (PA) gene, partial cds 519 519 100% 3e-144 95%
AY060167.1 Influenza A virus (A/SW/MN/16356/01(H1N2)) polymerase A protein (PA) gene, partial cds 519 519 100% 3e-144 95%
AY060164.1 Influenza A virus (A/SW/OH/7802/00(H1N2)) polymerase A protein (PA) gene, partial cds 519 519 96% 3e-144 96%
AY060163.1 Influenza A virus (A/SW/MN/3128/00(H1N2)) polymerase A protein (PA) gene, partial cds 519 519 96% 3e-144 96%
CY004543.1 Influenza A virus (A/blue-winged teal/Alberta/141/1992(H1N1)) polymerase PA (PA) gene, complete cds 519 519 100% 3e-144 95%
CY005425.1 Influenza A virus (A/sanderling/DE/1258/1986(H6N6)) segment 3, complete sequence 515 515 98% 5e-143 95%
HQ734227.1 Influenza A virus (A/swine/Pennsylvania/62170-4/2010(H3N2)) segment 3 polymerase PA (PA) gene, complete cds 513 513 99% 2e-142 95%
HQ734221.1 Influenza A virus (A/swine/Pennsylvania/62170-3/2010(H3N2)) segment 3 polymerase PA (PA) gene, complete cds 513 513 99% 2e-142 95%
HQ734209.1 Influenza A virus (A/swine/Pennsylvania/62170-1/2010(H3N2)) segment 3 polymerase PA (PA) gene, complete cds 513 513 99% 2e-142 95%
CY085605.1 Influenza A virus (A/swine/Hong Kong/1578/2003(H1N2)) polymerase PA (PA) gene, complete cds 511 511 100% 8e-142 95%
JF346704.1 Influenza A virus (A/swine/Korea/4381/2009(H1N2)) segment 3 polymerase PA (PA) gene, partial cds 511 511 100% 8e-142 95%

_________________
www.twitter.com/hniman

Top 100 PA matches

JF346684.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 5 nucleocapsid protein (NP) gene, partial cds 862 862 100% 0.0 100%
JF346683.1 Influenza A virus (A/swine/Korea/4941/2010(H1N2)) segment 5 nucleocapsid protein (NP) gene, partial cds 862 862 100% 0.0 100%
JF346679.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 5 nucleocapsid protein (NP) gene, partial cds 862 862 100% 0.0 100%
JF346676.1 Influenza A virus (A/swine/Korea/4372/2009(H1N2)) segment 5 nucleocapsid protein (NP) gene, partial cds 862 862 100% 0.0 100%
EU798848.1 Influenza A virus (A/swine/Korea/CY08/2007(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 831 831 100% 0.0 99%
EU798847.1 Influenza A virus (A/swine/Korea/PZ14/2006(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 831 831 100% 0.0 99%
EU798846.1 Influenza A virus (A/swine/Korea/PZ7/2006(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 831 831 100% 0.0 99%
EU798845.1 Influenza A virus (A/swine/Korea/PZ4/2006(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 831 831 100% 0.0 99%
EU798842.1 Influenza A virus (A/swine/Korea/JL02/2005(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 831 831 100% 0.0 99%
EU798844.1 Influenza A virus (A/swine/Korea/Asan04/2006(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 807 807 100% 0.0 98%
EU798843.1 Influenza A virus (A/swine/Korea/JL04/2005(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 807 807 100% 0.0 98%
EU798841.1 Influenza A virus (A/swine/Korea/JL01/2005(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 807 807 100% 0.0 98%
EU798840.1 Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 807 807 100% 0.0 98%
GU135884.1 Influenza A virus (A/swine/Iowa/H02PW7/2002(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 799 799 100% 0.0 98%
GU135911.1 Influenza A virus (A/swine/Iowa/H03G1/2003(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 799 799 100% 0.0 98%
GU135934.1 Influenza A virus (A/swine/Iowa/H03HS5/2003(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 799 799 100% 0.0 98%
GU135966.1 Influenza A virus (A/swine/Iowa/H03US3/2003(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 799 799 100% 0.0 98%
HM125975.1 Influenza A virus (A/swine/MN/48683/2002(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 799 799 100% 0.0 98%
EU798839.1 Influenza A virus (A/swine/Korea/CAS08/2005(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 799 799 100% 0.0 98%
EU798838.1 Influenza A virus (A/swine/Korea/CAN01/2004(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 799 799 100% 0.0 98%
GU135958.1 Influenza A virus (A/swine/Iowa/H03LS4/2003(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 791 791 100% 0.0 97%
EU743213.1 Influenza A virus (A/turkey/MN/366767/2005(H3N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 791 791 100% 0.0 97%
DQ889686.1 Influenza A virus (A/Iowa/CEID23/2005(H1N1)) nucleoprotein (NP) gene, complete cds 791 791 100% 0.0 97%
DQ150434.1 Influenza A virus (A/swine/IN/PU542/04 (H3N1)) nucleoprotein (NP) gene, complete cds 785 785 100% 0.0 97%
GU135868.1 Influenza A virus (A/swine/Iowa/H02NJ56371/2002(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 783 783 99% 0.0 97%
GU135876.1 Influenza A virus (A/swine/Iowa/H02NJ56391/2002(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 783 783 99% 0.0 97%
GU135974.1 Influenza A virus (A/swine/Iowa/H03UWF2/2003(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
GQ452238.1 Influenza A virus (A/swine/Iowa/H04YS2/2004(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 783 783 100% 0.0 97%
EU697205.1 Influenza A virus (A/turkey/Minnesota/366767/2005(H3N2)) nucleocapsid protein (NP) gene, complete cds 783 783 100% 0.0 97%
EU735821.1 Influenza A virus (A/turkey/OH/313053/2004(H3N2)) nucleocapsid protein (NP) gene, complete cds 783 783 100% 0.0 97%
EF551054.1 Influenza A virus (A/swine/North Carolina/2003(H3N2)) segment 5 nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
EF551046.1 Influenza A virus (A/turkey/Illinois/2004(H3N2)) segment 5 nucleoprotein (NP) gene, partial cds 783 783 100% 0.0 97%
DQ469999.1 Influenza A virus (A/turkey/Ontario/31232/2005(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ469991.1 Influenza A virus (A/swine/Ontario/33853/2005(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ469983.1 Influenza A virus (A/swine/Manitoba/12707/2005(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ469975.1 Influenza A virus (A/swine/British Columbia/28103/2005(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ469967.1 Influenza A virus (A/swine/Alberta/14722/2005(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ469959.1 Influenza A virus (A/Ontario/RV1273/2005(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ150426.1 Influenza A virus (A/swine/MI/PU243/04 (H3N1)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
AF455699.1 Influenza A virus (A/Swine/Ohio/891/01(H1N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ335774.1 Influenza A virus (A/turkey/Ohio/313053/04(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
AF342819.1 Influenza A virus (A/Wisconsin/10/98 (H1N1)) nucleoprotein gene, complete cds 783 783 100% 0.0 97%
GU135892.1 Influenza A virus (A/swine/Iowa/H03BF5/2003(H3N2)) segment 5 nucleoprotein (NP) gene, complete cds 775 775 100% 0.0 97%
GU135926.1 Influenza A virus (A/swine/Iowa/H03HO7/2003(H3N2)) segment 5 nucleoprotein (NP) gene, complete cds 775 775 100% 0.0 97%
HM461787.1 Influenza A virus (A/swine/Kentucky/02086/2008(H1N1)) segment 5 nucleocapsid protein (NP) gene, partial cds 775 775 100% 0.0 97%
CY041880.1 Influenza A virus (A/mallard/South Dakota/Sg-00128/2007(H3N2)) segment 5 sequence 775 775 100% 0.0 97%
CY041872.1 Influenza A virus (A/mallard/South Dakota/Sg-00127/2007(H3N2)) segment 5 sequence 775 775 100% 0.0 97%
CY041864.1 Influenza A virus (A/northern pintail/South Dakota/Sg-00126/2007(H3N2)) segment 5 sequence 775 775 100% 0.0 97%
CY041856.1 Influenza A virus (A/mallard/South Dakota/Sg-00125/2007(H3N2)) segment 5 sequence 775 775 100% 0.0 97%
EU826545.2 Influenza A virus (A/swine/Quebec/4001/2005(H3N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 775 775 100% 0.0 97%
EU258936.1 Influenza A virus (A/swine/Missouri/2124514/2006(H2N3)) segment 5, complete sequence 775 775 100% 0.0 97%
AY129159.1 Influenza A virus (A/Swine/Korea/CY02/02(H1N2)) nucleoprotein (NP) mRNA, complete cds 775 775 100% 0.0 97%
GU135950.1 Influenza A virus (A/swine/Iowa/H03LJ10/2003(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 767 767 100% 0.0 97%
HM461763.1 Influenza A virus (A/swine/Minnesota/02053/2008(H1N1)) segment 5 nucleocapsid protein (NP) gene, partial cds 767 767 100% 0.0 97%
HM461803.1 Influenza A virus (A/swine/Minnesota/02011/2008(H1N2)) segment 5 nucleocapsid protein (NP) gene, partial cds 767 767 100% 0.0 97%
HM461811.1 Influenza A virus (A/swine/Missouri/02060/2008(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 767 767 100% 0.0 97%
CY045712.1 Influenza A virus (A/swine/Oklahoma/042169/2008(H1N2)) segment 5 sequence 767 767 100% 0.0 97%
CY045560.1 Influenza A virus (A/swine/Kansas/015252/2009(H3N2)) segment 5 sequence 767 767 100% 0.0 97%
CY045552.1 Influenza A virus (A/swine/Oklahoma/001142/2009(H3N2)) segment 5 sequence 767 767 100% 0.0 97%
CY041904.1 Influenza A virus (A/swine/Minnesota/SG-00239/2007(H1N2)) segment 5 sequence 767 767 100% 0.0 97%
EU826554.2 Influenza A virus (A/mink/Nova Scotia/1055488/2007(H3N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 767 767 100% 0.0 97%
AF455706.1 Influenza A virus (A/Swine/Illinois/100084/01 (H1N2)) nucleoprotein (NP) gene, complete cds 767 767 100% 0.0 97%
AF455704.1 Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2)) nucleoprotein (NP) gene, complete cds 767 767 100% 0.0 97%
AF153253.1 Influenza A virus (A/Swine/Texas/4199-2/98 (H3N2)) segment 5 nucleoprotein gene, partial cds 767 767 100% 0.0 97%
HM461771.1 Influenza A virus (A/swine/Iowa/02039/2008(H1N2)) segment 5 nucleocapsid protein (NP) gene, partial cds 759 759 100% 0.0 97%
HM461795.1 Influenza A virus (A/swine/Minnesota/02093/2008(H1N1)) segment 5 nucleocapsid protein (NP) gene, partial cds 759 759 100% 0.0 97%
HM461835.1 Influenza A virus (A/swine/Nebraska/02013/2008(H1N1)) segment 5 nucleocapsid protein (NP) gene, partial cds 759 759 100% 0.0 97%
CY045704.1 Influenza A virus (A/swine/Oklahoma/020736-1/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045696.1 Influenza A virus (A/swine/Oklahoma/020736-2/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045688.1 Influenza A virus (A/swine/Oklahoma/020734-3/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045680.1 Influenza A virus (A/swine/Oklahoma/020734-2/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045672.1 Influenza A virus (A/swine/Oklahoma/016179-9/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045664.1 Influenza A virus (A/swine/Oklahoma/016179-8/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045656.1 Influenza A virus (A/swine/Oklahoma/011521-4/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045648.1 Influenza A virus (A/swine/Oklahoma/011521-5/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045640.1 Influenza A virus (A/swine/Oklahoma/011289-8/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045624.1 Influenza A virus (A/swine/Oklahoma/011289-9/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045616.1 Influenza A virus (A/swine/Oklahoma/010710-8/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045608.1 Influenza A virus (A/swine/Oklahoma/010710-9/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045600.1 Influenza A virus (A/swine/Oklahoma/010226-17/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045592.1 Influenza A virus (A/swine/Oklahoma/010226-16/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045544.1 Influenza A virus (A/swine/Oklahoma/053259/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045536.1 Influenza A virus (A/swine/Texas/050625/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045528.1 Influenza A virus (A/swine/Texas/050593/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045520.1 Influenza A virus (A/swine/Oklahoma/032726/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
FJ461599.1 Influenza A virus (A/swine/Korea/C13/2008(H5N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 759 759 100% 0.0 97%
EU798856.1 Influenza A virus (A/swine/Korea/CY09/2007(H3N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 759 759 100% 0.0 97%
EU798854.1 Influenza A virus (A/swine/Korea/CY05/2007(H3N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 759 759 100% 0.0 97%
EU798853.1 Influenza A virus (A/swine/Korea/CY04/2007(H3N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 759 759 100% 0.0 97%
EU735829.1 Influenza A virus (A/turkey/NC/353568/2005(H3N2)) nucleocapsid protein (NP) gene, complete cds 759 759 100% 0.0 97%
EU258946.1 Influenza A virus (A/swine/Missouri/4296424/2006(H2N3)) segment 5, complete sequence 759 759 100% 0.0 97%
DQ666947.1 Influenza A virus (A/swine/Korea/S15/2006(H1N2)) segment 5 nucleoprotein gene, complete cds 759 759 100% 0.0 97%
DQ666936.1 Influenza A virus (A/swine/Korea/S11/2005(H1N2)) segment 5 nucleoprotein gene, complete cds 759 759 100% 0.0 97%
DQ666928.1 Influenza A virus (A/swine/Korea/S5/2005(H1N2)) segment 5 nucleoprotein gene, complete cds 759 759 100% 0.0 97%
DQ923513.1 Influenza A virus (A/swine/Korea/CN22/2006(H3N1)) nucleoprotein (NP) gene, complete cds 759 759 100% 0.0 97%
DQ923512.1 Influenza A virus (A/swine/Korea/PZ72-1/2006(H3N1)) nucleoprotein (NP) gene, complete cds 759 759 100% 0.0 97%
AY038019.1 Influenza A virus (A/Turkey/MO/24093/99(H1N2)) nucleoprotein (NP) gene, partial cds 759 759 100% 0.0 97%
AF455705.1 Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2)) nucleoprotein (NP) gene, complete cds 759 759 100% 0.0 97%
AF153255.1 Influenza A virus (A/Swine/Iowa/8548-1/98) segment 5 nucleoprotein gene, partial cds 759 759 100% 0.0 97%
AF153254.1 Influenza A virus (A/Swine/Minnesota/9088-2/98 (H3N2)) segment 5 nucleoprotein gene, partial cds 759 759 100% 0.0 97%

_________________
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Top 100 MP matches

JF346689.1 Influenza A virus (A/swine/Korea/4456/2009(H1N2)) segment 7 matrix protein 1 (M1) gene, partial cds 315 315 100% 5e-83 100%
JF346688.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 7 matrix protein 1 (M1) gene, partial cds 315 315 100% 5e-83 100%
JF346686.1 Influenza A virus (A/swine/Korea/4381/2009(H1N2)) segment 7 matrix protein 1 (M1) gene, partial cds 315 315 100% 5e-83 100%
JF346685.1 Influenza A virus (A/swine/Korea/4372/2009(H1N2)) segment 7 matrix protein 1 (M1) gene, partial cds 315 315 100% 5e-83 100%
JF346690.1 Influenza A virus (A/swine/Korea/4779/2010(H1N2)) segment 7 matrix protein 1 (M1) gene, partial cds 291 291 97% 7e-76 98%
FJ461595.1 Influenza A virus (A/swine/Korea/C13/2008(H5N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 291 291 97% 7e-76 98%
EU798804.1 Influenza A virus (A/swine/Korea/Asan04/2006(H1N2)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 291 291 97% 7e-76 98%
EU798803.1 Influenza A virus (A/swine/Korea/JL04/2005(H1N2)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 291 291 97% 7e-76 98%
EU798801.1 Influenza A virus (A/swine/Korea/JL01/2005(H1N2)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 291 291 97% 7e-76 98%
EU798800.1 Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 291 291 97% 7e-76 98%
DQ923511.1 Influenza A virus (A/swine/Korea/CN22/2006(H3N1)) matrix (M) gene, complete cds 291 291 97% 7e-76 98%
DQ923510.1 Influenza A virus (A/swine/Korea/PZ72-1/2006(H3N1)) matrix (M) gene, complete cds 291 291 97% 7e-76 98%
HM461765.1 Influenza A virus (A/swine/Minnesota/02053/2008(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 283 283 100% 2e-73 97%
EU798808.1 Influenza A virus (A/swine/Korea/CY08/2007(H1N2)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 283 283 97% 2e-73 98%
EU798807.1 Influenza A virus (A/swine/Korea/PZ14/2006(H1N2)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 283 283 97% 2e-73 98%
EU798806.1 Influenza A virus (A/swine/Korea/PZ7/2006(H1N2)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 283 283 97% 2e-73 98%
EU798805.1 Influenza A virus (A/swine/Korea/PZ4/2006(H1N2)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 283 283 97% 2e-73 98%
EU798802.1 Influenza A virus (A/swine/Korea/JL02/2005(H1N2)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 283 283 97% 2e-73 98%
AY129158.1 Influenza A virus (A/Swine/Korea/CY02/02(H1N2)) matrix protein (M) mRNA, complete cds 283 283 97% 2e-73 98%
AY060071.1 Influenza A virus (A/SW/IN/14810-S/01(H1N2)) matrix protein (M) gene, complete cds 283 283 97% 2e-73 98%
AY060070.1 Influenza A virus (A/SW/IN/14810-T/01(H1N2)) matrix protein (M) gene, complete cds 283 283 97% 2e-73 98%
AY060069.1 Influenza A virus (A/SW/MN/34893/01(H1N2)) matrix protein (M) gene, complete cds 283 283 97% 2e-73 98%
AY060067.1 Influenza A virus (A/SW/OH/7802/00(H1N2)) matrix protein (M) gene, complete cds 283 283 97% 2e-73 98%
HQ424896.1 Influenza A virus (A/swine/North Carolina/44837-4/2009(H1N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
HQ378743.1 Influenza A virus(A/swine/Missouri/46519-5/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
HQ378737.1 Influenza A virus(A/swine/Iowa/46519-3/2008(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
HM461781.1 Influenza A virus (A/swine/Ohio/02026/2008(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
HM461797.1 Influenza A virus (A/swine/Minnesota/02093/2008(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
HM461805.1 Influenza A virus (A/swine/Minnesota/02011/2008(H1N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
HM461813.1 Influenza A virus (A/swine/Missouri/02060/2008(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
HM461821.1 Influenza A virus (A/swine/North Carolina/02023/2008(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
GU984386.1 Influenza A virus (A/swine/OR/10-004060/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
GU480920.1 Influenza A virus (A/swine/SD/31813/2009(H1N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
FJ611901.1 Influenza A virus (A/swine/Minnesota/07002083/2007(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
FJ410143.1 Influenza A virus (A/swine/Minnesota/1145/2007(H3N2)) segment 7, complete sequence 276 276 100% 4e-71 96%
CY045570.1 Influenza A virus (A/swine/Oklahoma/008722/2007(H3N2)) segment 7 sequence 276 276 100% 4e-71 96%
GQ484361.1 Influenza A virus (A/swine/Kansas/77778/2007(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
CY041906.1 Influenza A virus (A/swine/Minnesota/SG-00239/2007(H1N2)) segment 7 sequence 276 276 100% 4e-71 96%
CY041850.1 Influenza A virus (A/swine/North Carolina/R08-001877-D08-013371/2008 (H3N2)) segment 7 sequence 276 276 100% 4e-71 96%
FJ638317.1 Influenza A virus (A/swine/IL/07003243/2007(H1N2)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 276 276 100% 4e-71 96%
EU604695.1 Influenza A virus (A/swine/OH/511445/2007(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
EU826546.1 Influenza A virus (A/swine/Quebec/4001/2005(H3N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
EU735819.1 Influenza A virus (A/turkey/OH/313053/2004(H3N2)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
EU735827.1 Influenza A virus (A/turkey/NC/353568/2005(H3N2)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 276 276 100% 4e-71 96%
EU409951.1 Influenza A virus (A/swine/Ohio/24366/2007(H1N1)) matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 276 276 100% 4e-71 96%
CY031253.1 Influenza A virus (A/swine/North Carolina/Sg-00251/2007(H3N2)) segment 7 sequence 276 276 100% 4e-71 96%
CY031252.1 Influenza A virus (A/swine/Iowa/Sg-00250/2007(H3N2)) segment 7 sequence 276 276 100% 4e-71 96%
EU399752.1 Influenza A virus (A/Ontario/1252/2007(H3N2)) matrix protein 2 (MP2) and matrix protein 1 (MP1) genes, complete cds 276 276 100% 4e-71 96%
EF551056.1 Influenza A virus (A/swine/North Carolina/2003(H3N2)) matrix protein 2 (MP2) and matrix protein 1 (MP1) genes, complete cds 276 276 100% 4e-71 96%
EF551048.1 Influenza A virus (A/turkey/Illinois/2004(H3N2)) matrix protein 2 (MP2) and matrix protein 1 (MP1) genes, complete cds 276 276 100% 4e-71 96%
DQ470001.1 Influenza A virus (A/turkey/Ontario/31232/2005(H3N2)) matrix protein 2 (MP2) and matrix protein 1 (MP1) genes, complete cds 276 276 100% 4e-71 96%
DQ469993.1 Influenza A virus (A/swine/Ontario/33853/2005(H3N2)) matrix protein 2 (MP2) and matrix protein 1 (MP1) genes, complete cds 276 276 100% 4e-71 96%
DQ469985.1 Influenza A virus (A/swine/Manitoba/12707/2005(H3N2)) matrix protein 2 (MP2) and matrix protein 1 (MP1) genes, complete cds 276 276 100% 4e-71 96%
DQ469977.1 Influenza A virus (A/swine/British Columbia/28103/2005(H3N2)) matrix protein 2 (MP2) and matrix protein 1 (MP1) genes, complete cds 276 276 100% 4e-71 96%
DQ469969.1 Influenza A virus (A/swine/Alberta/14722/2005(H3N2)) matrix protein 2 (MP2) and matrix protein 1 (MP1) genes, complete cds 276 276 100% 4e-71 96%
DQ469961.1 Influenza A virus (A/Ontario/RV1273/2005(H3N2)) matrix protein 2 (MP2) and matrix protein 1 (MP1) genes, complete cds 276 276 100% 4e-71 96%
DQ150428.1 Influenza A virus (A/swine/MI/PU243/04 (H3N1)) matrix (M1) gene, complete cds 276 276 100% 4e-71 96%
DQ335772.1 Influenza A virus (A/turkey/Ohio/313053/04(H3N2)) membrane protein (M) gene, complete cds 276 276 100% 4e-71 96%
JF312081.1 Influenza A virus (A/swine/Illinois/A01057088/2010(H3N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
JF312080.1 Influenza A virus (A/swine/Illinois/A01057087/2010(H3N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
HQ734206.1 Influenza A virus (A/swine/Illinois/53612-7/2010(H3N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
HQ734203.1 Influenza A virus (A/swine/Illinois/53612-6/2010(H3N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
HQ734200.1 Influenza A virus (A/swine/Illinois/53612-5/2009(H3N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
HQ734197.1 Influenza A virus (A/swine/Illinois/53612-4/2009(H3N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
HQ734194.1 Influenza A virus (A/swine/Illinois/53612-3/2009(H3N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
HQ734191.1 Influenza A virus (A/swine/Illinois/53612-2/2009(H3N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
HQ734188.1 Influenza A virus (A/swine/Illinois/53612-1/2009(H3N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
GU135870.1 Influenza A virus (A/swine/Iowa/H02NJ56371/2002(H1N1)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 268 268 97% 1e-68 96%
GU135894.1 Influenza A virus (A/swine/Iowa/H03BF5/2003(H3N2)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 268 268 97% 1e-68 96%
GU135913.1 Influenza A virus (A/swine/Iowa/H03G1/2003(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 97% 1e-68 96%
GU135928.1 Influenza A virus (A/swine/Iowa/H03HO7/2003(H3N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 97% 1e-68 96%
GU135952.1 Influenza A virus (A/swine/Iowa/H03LJ10/2003(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 97% 1e-68 96%
GU135960.1 Influenza A virus (A/swine/Iowa/H03LS4/2003(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 97% 1e-68 96%
GU135968.1 Influenza A virus (A/swine/Iowa/H03US3/2003(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 97% 1e-68 96%
GU135976.1 Influenza A virus (A/swine/Iowa/H03UWF2/2003(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 97% 1e-68 96%
HQ378731.1 Influenza A virus(A/swine/Iowa/46519-1/2007(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
GQ452236.1 Influenza A virus (A/swine/Iowa/H04YS2/2004(H1N1)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 268 268 97% 1e-68 96%
HM125977.1 Influenza A virus (A/swine/MN/48683/2002(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 97% 1e-68 96%
GQ457552.1 Influenza A virus (A/Saskatchewan/5351/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
GQ457551.1 Influenza A virus (A/Saskatchewan/5350/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
GQ457550.1 Influenza A virus (A/Saskatchewan/5131/2009(H1N1)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
CY045698.1 Influenza A virus (A/swine/Oklahoma/020736-2/2008(H1N2)) segment 7 sequence 268 268 100% 1e-68 96%
CY045682.1 Influenza A virus (A/swine/Oklahoma/020734-2/2008(H1N2)) segment 7 sequence 268 268 100% 1e-68 96%
CY045674.1 Influenza A virus (A/swine/Oklahoma/016179-9/2008(H1N2)) segment 7 sequence 268 268 100% 1e-68 96%
CY045666.1 Influenza A virus (A/swine/Oklahoma/016179-8/2008(H1N2)) segment 7 sequence 268 268 100% 1e-68 96%
CY045658.1 Influenza A virus (A/swine/Oklahoma/011521-4/2008(H1N2)) segment 7 sequence 268 268 100% 1e-68 96%
CY045650.1 Influenza A virus (A/swine/Oklahoma/011521-5/2008(H1N2)) segment 7 sequence 268 268 100% 1e-68 96%
CY045618.1 Influenza A virus (A/swine/Oklahoma/010710-8/2008(H1N2)) segment 7 sequence 268 268 100% 1e-68 96%
CY045610.1 Influenza A virus (A/swine/Oklahoma/010710-9/2008(H1N2)) segment 7 sequence 268 268 100% 1e-68 96%
CY045578.1 Influenza A virus (A/swine/Oklahoma/011506/2007(H3N2)) segment 7 sequence 268 268 100% 1e-68 96%
CY045546.1 Influenza A virus (A/swine/Oklahoma/053259/2008(H1N2)) segment 7 sequence 268 268 100% 1e-68 96%
EU697212.1 Influenza A virus (A/turkey/North Carolina/353568/2005(H3N2)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
EU697207.1 Influenza A virus (A/turkey/Minnesota/366767/2005(H3N2)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
EU798799.1 Influenza A virus (A/swine/Korea/CAS08/2005(H1N1)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 268 268 97% 1e-68 96%
EU798798.1 Influenza A virus (A/swine/Korea/CAN01/2004(H1N1)) segment 7 matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 268 268 97% 1e-68 96%
EU743211.1 Influenza A virus (A/turkey/MN/366767/2005(H3N2)) segment 7 matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 100% 1e-68 96%
EU409962.1 Influenza A virus (A/swine/Ohio/C62006/2006(H1N1)) matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 268 268 100% 1e-68 96%
EU409957.1 Influenza A virus (A/swine/Ohio/75004/2004(H1N1)) matrix protein 2 (M2) gene, partial cds; and matrix protein 1 (M1) gene, complete cds 268 268 97% 1e-68 96%
DQ889688.1 Influenza A virus (A/Iowa/CEID23/2005(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 268 268 97% 1e-68 96%
DQ666945.1 Influenza A virus (A/swine/Korea/S15/2006(H1N2)) matrix protein 2 and matrix protein 1 genes, complete cds 268 268 97% 1e-68 96%

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www.twitter.com/hniman

so mexflu is common in swine in Korea and Canada/Minnesota

so common that it frequently reassorts with tripl

reassortants may jump to humans

do they have PB1-F2

let's make a list of all reassortment variants

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no patents on genes, publish the GISAID sequences !

Please. They all have the human pb1 from 1993.

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www.twitter.com/hniman