Rhiza Labs FluTracker Forum

Top 100 NS matches

JF346743.1 Influenza A virus (A/swine/Korea/4456/2009(H1N2)) segment 8 nonstructural protein 1 (NS1) and nuclear export protein (NEP) genes, partial cds 1243 1243 100% 0.0 100%
JF346741.1 Influenza A virus (A/swine/Korea/4382/2009(H1N2)) segment 8 nonstructural protein 1 (NS1) and nuclear export protein (NEP) genes, partial cds 1243 1243 100% 0.0 100%
CY087020.1 Influenza A virus (A/New York/4764/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY087012.1 Influenza A virus (A/New York/3565/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY086997.1 Influenza A virus (A/New York/3251/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY086973.1 Influenza A virus (A/New York/3198/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY086952.1 Influenza A virus (A/swine/Thailand/CU-M8_2/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY040721.2 Influenza A virus (A/New York/3238/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
JF327344.1 Influenza A virus (A/Finland/671/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY084466.1 Influenza A virus (A/New York/6537/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083946.1 Influenza A virus (A/San Diego/INS194/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083930.1 Influenza A virus (A/Warsaw/INS148/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083874.1 Influenza A virus (A/San Diego/INS49/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083834.1 Influenza A virus (A/San Diego/INS07/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083829.1 Influenza A virus (A/Wroclaw/INS435/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083801.1 Influenza A virus (A/Berlin/INS362/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083757.1 Influenza A virus (A/Brussels/INS205/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083694.1 Influenza A virus (A/Terrassa/INS94/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083665.1 Influenza A virus (A/San Diego/INS41/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083555.1 Influenza A virus (A/Budapest/WRAIR2393T/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083547.1 Influenza A virus (A/Budapest/WRAIR2393N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083491.1 Influenza A virus (A/Mexico City/WRAIR1691N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083451.1 Influenza A virus (A/Mexico City/WRAIR1679N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083443.1 Influenza A virus (A/Ft.Benning/WRAIR1669P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083435.1 Influenza A virus (A/San Diego/WRAIR1668P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083411.1 Influenza A virus (A/San Diego/WRAIR1665P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083395.1 Influenza A virus (A/San Diego/WRAIR1663P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083387.1 Influenza A virus (A/San Diego/WRAIR1662P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083379.1 Influenza A virus (A/Pendleton/WRAIR1661P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083371.1 Influenza A virus (A/South Carolina/WRAIR1660P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083348.1 Influenza A virus (A/San Diego/WRAIR1656P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083260.1 Influenza A virus (A/San Diego/WRAIR1642P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083204.1 Influenza A virus (A/South Carolina/WRAIR1503P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083196.1 Influenza A virus (A/California/WRAIR1502P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083188.1 Influenza A virus (A/South Carolina/WRAIR1501P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083180.1 Influenza A virus (A/South Carolina/WRAIR1500P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083148.1 Influenza A virus (A/Bishkek/WRAIR0883N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083124.1 Influenza A virus (A/Quito/WRAIR0617T/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083060.1 Influenza A virus (A/Colorado/WRAIR0353S/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083052.1 Influenza A virus (A/Lima/WRAIR0285F/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY081129.3 Influenza A virus (A/Thailand/CU-C1028/2010(H1N1)) nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
CY081530.1 Influenza A virus (A/Cambodia/NHRCC00006/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY081123.1 Influenza A virus (A/Thailand/CU-C1025/2010(H1N1)) nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
CY081117.1 Influenza A virus (A/Thailand/CU-C1006/2010(H1N1)) nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
CY081111.1 Influenza A virus (A/Thailand/CU-C1005/2010(H1N1)) nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
CY050371.1 Influenza A virus (A/Korea/S1/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
HQ240370.1 Influenza A virus (A/Canada-AB/RV2735/2009(H1N1)) segment 8 nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
HQ240243.1 Influenza A virus (A/Canada-MB/RV0062-10/2009(H1N1)) segment 8 nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
HQ840321.1 Influenza A virus (A/swine/Minnesota/165A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HQ840313.1 Influenza A virus (A/swine/Minnesota/136B/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HQ840308.1 Influenza A virus (A/swine/Minnesota/130A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HQ840300.1 Influenza A virus (A/swine/Minnesota/130A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HQ840294.1 Influenza A virus (A/swine/Minnesota/074A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY074044.1 Influenza A virus (A/Argentina/HNRG45/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074034.1 Influenza A virus (A/Argentina/HNRG36/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074029.1 Influenza A virus (A/Argentina/HNRG33/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074024.1 Influenza A virus (A/Argentina/HNRG32/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074014.1 Influenza A virus (A/Argentina/HNRG21/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074004.1 Influenza A virus (A/Argentina/HNRG14/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY073999.1 Influenza A virus (A/Argentina/HNRG107/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY073978.1 Influenza A virus (A/Argentina/HNRG104/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
HQ011422.1 Influenza A virus (A/Guangdong/45/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY069238.1 Influenza A virus (A/Munich/INS365/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069198.1 Influenza A virus (A/Athens/INS358/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069166.1 Influenza A virus (A/Athens/INS353/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069142.1 Influenza A virus (A/Madrid/INS300/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069134.1 Influenza A virus (A/Madrid/INS299/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069126.1 Influenza A virus (A/Madrid/INS298/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069102.1 Influenza A virus (A/Guam/NHRC0027/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069070.1 Influenza A virus (A/Guam/NHRC0023/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069062.1 Influenza A virus (A/Guam/NHRC0022/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069046.1 Influenza A virus (A/Guam/NHRC0020/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069030.1 Influenza A virus (A/Guam/NHRC0018/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069006.1 Influenza A virus (A/Guam/NHRC0015/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY068990.1 Influenza A virus (A/Guam/NHRC0013/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY068942.1 Influenza A virus (A/Guam/NHRC0008/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
HM855251.1 Influenza A virus (A/Meru/456/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HM855245.1 Influenza A virus (A/Trans-nzoia/168/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HM855244.1 Influenza A virus (A/Eldoret/120/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HM855243.1 Influenza A virus (A/Keiyo/96/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HM855242.1 Influenza A virus (A/Garissa/78/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HM780486.1 Influenza A virus (A/Guangdong/0862/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY067171.1 Influenza A virus (A/Bonn/INS280/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY067043.1 Influenza A virus (A/Aarhus/INS252/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY067027.1 Influenza A virus (A/Bochum/INS250/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY067019.1 Influenza A virus (A/Bochum/INS249/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066987.1 Influenza A virus (A/Brussels/INS243/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066963.1 Influenza A virus (A/Aarhus/INS240/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066955.1 Influenza A virus (A/Aarhus/INS238/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066931.1 Influenza A virus (A/Pensacola/INS235/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066923.1 Influenza A virus (A/Pensacola/INS234/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066915.1 Influenza A virus (A/Pensacola/INS233/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066859.1 Influenza A virus (A/District of Columbia/INS226/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066851.1 Influenza A virus (A/Madrid/INS225/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066827.1 Influenza A virus (A/Antwerp/INS221/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066787.1 Influenza A virus (A/San Diego/INS214/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066763.1 Influenza A virus (A/Pensacola/INS211/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066755.1 Influenza A virus (A/Pensacola/INS210/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066675.1 Influenza A virus (A/Tessenderlo/INS287/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
HQ240242.1 Influenza A virus (A/Canada-NB/RV0005-10/2009(H1N1)) segment 8 nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1231 1231 100% 0.0 99%

_________________
www.twitter.com/hniman

A/swine/Korea/5008/2010 is trH1N2 that has acquired two pandemic H1N1 gene segments (MP and NS).

_________________
www.twitter.com/hniman

Top 100 HA matches

JF346729.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 4 hemagglutinin (HA) gene, partial cds 470 470 100% 2e-129 100%
JF346728.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 4 hemagglutinin (HA) gene, partial cds 470 470 100% 2e-129 100%
JF346727.1 Influenza A virus (A/swine/Korea/4372/2009(H1N2)) segment 4 hemagglutinin (HA) gene, partial cds 470 470 100% 2e-129 100%
JF346723.1 Influenza A virus (A/swine/Korea/4456/2009(H1N2)) segment 4 hemagglutinin (HA) gene, partial cds 470 470 100% 2e-129 100%
GU817056.1 Influenza A virus (A/swine/Minnesota/02951/2009(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 351 351 100% 1e-93 93%
GU817054.1 Influenza A virus (A/swine/Minnesota/02949/2009(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 351 351 100% 1e-93 93%
GQ229309.1 Influenza A virus (A/swine/Hong Kong/78/2003(H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 351 351 100% 1e-93 93%
CY040509.1 Influenza A virus (A/swine/North Carolina/63607-9/2008(H1N1)) segment 4 sequence 351 351 100% 1e-93 93%
CY040480.1 Influenza A virus (A/swine/Minnesota/63607-15/2008 (H1N1)) segment 4 sequence 351 351 100% 1e-93 93%
CY040476.1 Influenza A virus (A/swine/Minnesota/225-4/2008(H1N1)) segment 4 sequence 351 351 100% 1e-93 93%
AF455675.1 Influenza A virus (A/Swine/Ohio/891/01(H1N2)) hemagglutinin (HA) gene, complete cds 351 351 100% 1e-93 93%
AF250124.1 Influenza A virus (A/Swine/Indiana/9K035/99 (H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 351 351 100% 1e-93 93%
CY040485.1 Influenza A virus (A/swine/Minnesota/63607-30/2008(H1N1)) segment 4 sequence 345 345 95% 8e-92 94%
AY060050.1 Influenza A virus (A/SW/MN/16419/01(H1N2)) hemagglutinin (HA) gene, complete cds 345 345 95% 8e-92 94%
CY086912.1 Influenza A virus (A/swine/Minnesota/226128/2010(H1N1)) hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
CY086467.1 Influenza A virus (A/swine/Hong Kong/1068/2002(H1N2)) hemagglutinin (HA) gene, partial cds 343 343 100% 3e-91 93%
CY086465.1 Influenza A virus (A/swine/Hong Kong/1065/2002(H1N2)) hemagglutinin (HA) gene, partial cds 343 343 100% 3e-91 93%
HQ378729.1 Influenza A virus(A/swine/Iowa/46519-1/2007(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
HM461778.1 Influenza A virus (A/swine/Ohio/02026/2008(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 343 343 100% 3e-91 93%
HM461810.1 Influenza A virus (A/swine/Missouri/02060/2008(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 343 343 100% 3e-91 93%
HM570051.1 Influenza A virus (A/swine/Minnesota/03025/2010(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
GQ484355.1 Influenza A virus (A/swine/Kansas/77778/2007(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
CY040561.1 Influenza A virus (A/swine/North Carolina/28126/2003(H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
CY040493.1 Influenza A virus (A/swine/Missouri/63607-16/2008(H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
CY040479.1 Influenza A virus (A/swine/Minnesota/63607-12/2008 (H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
CY040477.1 Influenza A virus (A/swine/Minnesota/225-5/2008 (H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
CY040475.1 Influenza A virus (A/swine/Minnesota/225-3/2008 (H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
CY040471.1 Influenza A virus (A/swine/Iowa/63607-23/2008(H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
CY040466.1 Influenza A virus (A/swine/Iowa/225-8/2008(H1N1)) segment 4 sequence 343 343 100% 3e-91 93%
FJ986621.1 Influenza A virus (A/Ohio/02/2007(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
FJ986620.1 Influenza A virus (A/Ohio/01/2007(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
EU604689.1 Influenza A virus (A/swine/OH/511445/2007(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 343 343 100% 3e-91 93%
EU409960.1 Influenza A virus (A/swine/Ohio/C62006/2006(H1N1)) hemagglutinin (HA) gene, partial cds 343 343 100% 3e-91 93%
EU409948.1 Influenza A virus (A/swine/Ohio/24366/2007(H1N1)) hemagglutinin (HA) gene, partial cds 343 343 100% 3e-91 93%
AF342821.1 Influenza A virus (A/Wisconsin/10/98 (H1N1)) heamagglutinin precursor, gene, partial cds 343 343 100% 3e-91 93%
CY040483.1 Influenza A virus (A/swine/Minnesota/63607-26/2008(H1N1)) segment 4 sequence 339 339 100% 5e-90 92%
CY086747.1 Influenza A virus (A/swine/Hong Kong/1472/2004(H1N2)) hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
CY086743.1 Influenza A virus (A/swine/Hong Kong/1441/2004(H1N2)) hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
JF312070.1 Influenza A virus (A/swine/Iowa/A01057153/2010(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
HM461818.1 Influenza A virus (A/swine/North Carolina/02023/2008(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
HM804853.1 Influenza A virus (A/swine/SD/1/2010(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
GU817055.1 Influenza A virus (A/swine/Minnesota/02950/2009(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
CY040595.1 Influenza A virus (A/swine/North Carolina/9856/2003(H1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040593.1 Influenza A virus (A/swine/North Carolina/44888/2003(H1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040576.1 Influenza A virus (A/swine/North Carolina/38767/2003(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040569.1 Influenza A virus (A/swine/North Carolina/34562/2003(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040557.1 Influenza A virus (A/swine/North Carolina/47437/2003(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040547.1 Influenza A virus (A/swine/North Carolina/43110/2003(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040510.1 Influenza A virus (A/swine/Ohio/63607-32/2008(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040505.1 Influenza A virus (A/swine/North Carolina/63607-37/2008(H1N1)) segment 4 sequence 335 335 98% 8e-89 93%
CY040502.1 Influenza A virus (A/swine/North Carolina/63607-25/2008(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040495.1 Influenza A virus (A/swine/North Carolina/225-13/2008(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040490.1 Influenza A virus (A/swine/Minnesota/63607-40/2008(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040486.1 Influenza A virus (A/swine/Minnesota/63607-31/2008 (H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040468.1 Influenza A virus (A/swine/Iowa/63607-1/2008 (H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
CY040461.1 Influenza A virus (A/swine/Illinois/225-1/2008(H1N1)) segment 4 sequence 335 335 100% 8e-89 92%
EU409955.1 Influenza A virus (A/swine/Ohio/75004/2004(H1N1)) hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
EU139830.1 Influenza A virus (A/swine/Minnesota/00194/2003(H1N2)) hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
EU139828.1 Influenza A virus (A/swine/Minnesota/1192/2001(H1N2)) hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
AY060048.1 Influenza A virus (A/SW/MN/23124-S/01(H1N2)) hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
AY060047.1 Influenza A virus (A/SW/MN/23124-T/01(H1N2)) hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
AY060045.1 Influenza A virus (A/SW/OH/7802/00(H1N2)) hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
AY060044.1 Influenza A virus (A/SW/NE/18339/01(H1N2)) hemagglutinin (HA) gene, partial cds 335 335 100% 8e-89 92%
AF455682.1 Influenza A virus (A/Swine/Illinois/100084/01 (H1N2)) hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
AF455681.1 Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2)) hemagglutinin (HA) gene, complete cds 335 335 100% 8e-89 92%
CY040504.1 Influenza A virus (A/swine/North Carolina/63607-28/2008(H1N1)) segment 4 sequence 329 329 95% 5e-87 93%
CY040494.1 Influenza A virus (A/swine/North Carolina/225-12/2008(H1N1)) segment 4 sequence 329 329 95% 5e-87 93%
EU798787.1 Influenza A virus (A/swine/Korea/PZ14/2006(H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 329 329 98% 5e-87 92%
EU798786.1 Influenza A virus (A/swine/Korea/PZ7/2006(H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 329 329 98% 5e-87 92%
EU798785.1 Influenza A virus (A/swine/Korea/PZ4/2006(H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 329 329 98% 5e-87 92%
DQ666944.1 Influenza A virus (A/swine/Korea/S15/2006(H1N2)) segment 4 hemagglutinin gene, partial cds 329 329 95% 5e-87 93%
DQ666941.1 Influenza A virus (A/swine/Korea/S14/2006(H1N2)) segment 4 hemagglutinin gene, partial cds 329 329 95% 5e-87 93%
DQ666925.1 Influenza A virus (A/swine/Korea/S5/2005(H1N2)) segment 4 hemagglutinin gene, partial cds 329 329 95% 5e-87 93%
CY086685.1 Influenza A virus (A/swine/Hong Kong/40/2004(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY086675.1 Influenza A virus (A/swine/Hong Kong/17/2004(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY086673.1 Influenza A virus (A/swine/Hong Kong/NS44/2004(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY086671.1 Influenza A virus (A/swine/Hong Kong/NS10/2004(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY086507.1 Influenza A virus (A/swine/Hong Kong/1822/2002(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY086499.1 Influenza A virus (A/swine/Hong Kong/1742/2002(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY086493.1 Influenza A virus (A/swine/Hong Kong/1720/2002(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
CY085622.1 Influenza A virus (A/swine/Hong Kong/NS30/2004(H1N2)) hemagglutinin (HA) gene, complete cds 327 327 100% 2e-86 92%
HM193851.1 Influenza A virus (A/swine/Iowa/02999/2010(H1N1)) segment 4 hemagglutinin (HA) gene, complete cds 327 327 100% 2e-86 92%
GQ229365.1 Influenza A virus (A/swine/Hong Kong/NS623/2002(H1N2)) segment 4 hemagglutinin (HA) gene, complete cds 327 327 100% 2e-86 92%
CY040603.1 Influenza A virus (A/swine/North Carolina/48718/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040602.1 Influenza A virus (A/swine/North Carolina/47754/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040601.1 Influenza A virus (A/swine/North Carolina/45090/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040600.1 Influenza A virus (A/swine/North Carolina/44885/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040599.1 Influenza A virus (A/swine/North Carolina/44275/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040591.1 Influenza A virus (A/swine/North Carolina/43506/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040586.1 Influenza A virus (A/swine/North Carolina/12866/2003(H1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040573.1 Influenza A virus (A/swine/North Carolina/26292/2003(H1N1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040571.1 Influenza A virus (A/swine/North Carolina/12869/2003(H1N1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040563.1 Influenza A virus (A/swine/North Carolina/43904/2003(H1N1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040555.1 Influenza A virus (A/swine/North Carolina/46858/2003(H1N1)) segment 4 sequence 327 327 100% 2e-86 92%
CY040543.1 Influenza A virus (A/swine/North Carolina/7386/2004(H1N1)) segment 4 sequence 327 327 100% 2e-86 92%
AY060031.1 Influenza A virus (A/SW/MN/12883/00(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 98% 2e-86 92%
AY060030.1 Influenza A virus (A/SW/AR/12491/00(H1N2)) hemagglutinin (HA) gene, partial cds 327 327 100% 2e-86 92%
HM570055.1 Influenza A virus (A/swine/Minnesota/03022/2010(H1N1)) segment 4 hemagglutinin (HA) gene, partial cds 325 325 94% 7e-86 93%
CY086505.1 Influenza A virus (A/swine/Hong Kong/1821/2002(H1N2)) hemagglutinin (HA) gene, partial cds 323 323 95% 3e-85 92%
EU224366.1 Influenza A virus (A/swine/Korea/GC0502/2005(H1N2)) hemagglutinin (HA) gene, partial cds 323 323 83% 3e-85 95%

_________________
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Top 100 NA matches

JF346738.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 630 630 100% 1e-177 100%
JF346735.1 Influenza A virus (A/swine/Korea/4779/2010(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 630 630 100% 1e-177 100%
JF346736.1 Influenza A virus (A/swine/Korea/4940/2010(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 622 622 100% 3e-175 99%
JF346734.1 Influenza A virus (A/swine/Korea/4456/2009(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 622 622 100% 3e-175 99%
JF346733.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 622 622 100% 3e-175 99%
JF346730.1 Influenza A virus (A/swine/Korea/4372/2009(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 622 622 100% 3e-175 99%
EU798825.1 Influenza A virus (A/swine/Korea/PZ4/2006(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 535 535 100% 6e-149 96%
EU798824.1 Influenza A virus (A/swine/Korea/Asan04/2006(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 535 535 100% 6e-149 96%
EU798821.1 Influenza A virus (A/swine/Korea/JL01/2005(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 535 535 100% 6e-149 96%
EU798823.1 Influenza A virus (A/swine/Korea/JL04/2005(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 527 527 100% 1e-146 95%
EU798820.1 Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 527 527 100% 1e-146 95%
EU798828.1 Influenza A virus (A/swine/Korea/CY08/2007(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 519 519 100% 3e-144 95%
EU798827.1 Influenza A virus (A/swine/Korea/PZ14/2006(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 519 519 100% 3e-144 95%
EU798826.1 Influenza A virus (A/swine/Korea/PZ7/2006(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 519 519 100% 3e-144 95%
EU798822.1 Influenza A virus (A/swine/Korea/JL02/2005(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 519 519 100% 3e-144 95%
GU135927.1 Influenza A virus (A/swine/Iowa/H03HO7/2003(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 504 504 100% 2e-139 94%
AY129157.1 Influenza A virus (A/Swine/Korea/CY02/02(H1N2)) neuraminidase (NA) mRNA, complete cds 504 504 100% 2e-139 94%
CY041881.1 Influenza A virus (A/mallard/South Dakota/Sg-00128/2007(H3N2)) segment 6 sequence 496 496 100% 5e-137 94%
CY041873.1 Influenza A virus (A/mallard/South Dakota/Sg-00127/2007(H3N2)) segment 6 sequence 496 496 100% 5e-137 94%
CY041865.1 Influenza A virus (A/northern pintail/South Dakota/Sg-00126/2007(H3N2)) segment 6 sequence 496 496 100% 5e-137 94%
CY041857.1 Influenza A virus (A/mallard/South Dakota/Sg-00125/2007(H3N2)) segment 6 sequence 496 496 100% 5e-137 94%
EU139840.1 Influenza A virus (A/swine/Minnesota/00194/2003(H1N2)) neuraminidase (NA) gene, partial cds 496 496 100% 5e-137 94%
AF455698.1 Influenza A virus (A/Swine/Illinois/100084/01 (H1N2)) neuraminidase (NA) gene, complete cds 496 496 100% 5e-137 94%
AF455697.1 Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2)) neuraminidase (NA) gene, complete cds 496 496 100% 5e-137 94%
AF153237.1 Influenza A virus (A/Swine/Texas/4199-2/98 (H3N2)) neuraminidase gene, partial cds 496 496 100% 5e-137 94%
GU135893.1 Influenza A virus (A/swine/Iowa/H03BF5/2003(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 488 488 100% 1e-134 94%
DQ666946.1 Influenza A virus (A/swine/Korea/S15/2006(H1N2)) segment 6 neuraminidase gene, complete cds 488 488 100% 1e-134 94%
DQ666943.1 Influenza A virus (A/swine/Korea/S14/2006(H1N2)) segment 6 neuraminidase gene, complete cds 488 488 100% 1e-134 94%
AY233391.1 Influenza A virus (A/duck/NC/91347/01(H1N2)) neuraminidase (NA) gene, complete cds 488 488 100% 1e-134 94%
AF455695.1 Influenza A virus (A/Swine/Iowa/930/01(H1N2)) neuraminidase (NA) gene, complete cds 488 488 100% 1e-134 94%
AF455694.1 Influenza A virus (A/Swine/Minnesota/55551/00 (H1N2)) neuraminidase (NA) gene, complete cds 488 488 100% 1e-134 94%
AF268140.1 Influenza A virus (A/Swine/Oklahoma/18089/99(H3N2)) neuraminidase protein gene, partial cds 488 488 100% 1e-134 94%
AF268137.1 Influenza A virus (A/Swine/Wisconsin/14094/99(H3N2)) neuraminidase protein gene, partial cds 488 488 100% 1e-134 94%
AF268135.1 Influenza A virus (A/Swine/Illinois/21587/99(H3N2)) neuraminidase protein gene, partial cds 488 488 100% 1e-134 94%
AF250126.1 Influenza A virus (A/Swine/Indiana/9K035/99 (H1N2)) neuraminidase (NA) gene, complete cds 488 488 100% 1e-134 94%
AF153238.1 Influenza A virus (A/Swine/Minnesota/9088-2/98 (H3N2)) neuraminidase gene, partial cds 488 488 100% 1e-134 94%
AF268136.1 Influenza A virus (A/Swine/Oklahoma/18717/99(H3N2)) neuraminidase protein gene, partial cds 486 486 99% 5e-134 94%
CY040525.1 Influenza A virus (A/swine/Minnesota/5547/2005(H3N2)) segment 6 sequence 484 484 100% 2e-133 94%
CY086898.1 Influenza A virus (A/swine/North Carolina/226125/2010(H1N2)) neuraminidase (NA) gene, complete cds 480 480 100% 3e-132 94%
AF455691.1 Influenza A virus (A/Swine/Ohio/891/01(H1N2)) neuraminidase (NA) gene, complete cds 480 480 100% 3e-132 94%
AF268139.1 Influenza A virus (A/Swine/NorthCarolina/16497/99(H3N2)) neuraminidase protein gene, partial cds 480 480 100% 3e-132 94%
CY086906.1 Influenza A virus (A/swine/North Carolina/226126/2010(H1N2)) neuraminidase (NA) gene, complete cds 474 474 100% 2e-130 93%
CY086890.1 Influenza A virus (A/swine/North Carolina/226124/2010(H1N2)) neuraminidase (NA) gene, complete cds 474 474 100% 2e-130 93%
JF346737.1 Influenza A virus (A/swine/Korea/4941/2010(H1N2)) segment 6 neuraminidase (NA) gene, partial cds 472 472 100% 7e-130 93%
AF455696.1 Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2)) neuraminidase (NA) gene, complete cds 472 472 100% 7e-130 93%
AF455693.1 Influenza A virus (A/Swine/North Carolina/93523/01 (H1N2)) neuraminidase (NA) gene, complete cds 472 472 100% 7e-130 93%
EU857298.1 Influenza A virus (A/Hong Kong/CUHK4803/1997(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
EF584348.1 Influenza A virus (A/Minnesota/6/1996(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
CY011418.1 Influenza A virus (A/New York/571/1996(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY010022.1 Influenza A virus (A/New York/582/1996(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
AF533996.1 Influenza A virus (A/Buenos Aires/4559/96(H3N2)) neuraminidase (NA) gene, complete cds 470 470 99% 3e-129 93%
CY006461.1 Influenza A virus (A/New York/512/1998(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
CY006277.1 Influenza A virus (A/New York/515/1997(H3N2)) segment 6, complete sequence 470 470 99% 3e-129 93%
GQ229314.1 Influenza A virus (A/swine/Hong Kong/78/2003(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 468 468 100% 1e-128 93%
CY086938.1 Influenza A virus (A/swine/North Carolina/239108/2010(H1N2)) neuraminidase (NA) gene, complete cds 464 464 100% 2e-127 93%
HQ424895.1 Influenza A virus (A/swine/North Carolina/44837-4/2009(H1N2)) segment 6 neuraminidase (NA) gene, complete cds 464 464 100% 2e-127 93%
EU139841.1 Influenza A virus (A/swine/Kansas/00246/2004(H1N2)) neuraminidase (NA) gene, partial cds 464 464 100% 2e-127 93%
EU139838.1 Influenza A virus (A/swine/Minnesota/1192/2001(H1N2)) neuraminidase (NA) gene, partial cds 464 464 100% 2e-127 93%
DQ666927.1 Influenza A virus (A/swine/Korea/S5/2005(H1N2)) segment 6 neuraminidase gene, complete cds 464 464 100% 2e-127 93%
AF251428.2 Influenza A virus (A/Swine/Minnesota/593/99 (H3N2)) neuraminidase (NA) gene, complete cds 464 464 100% 2e-127 93%
AF251412.3 Influenza A virus (A/Swine/Iowa/533/99 (H3N2)) neuraminidase (NA) gene, complete cds 464 464 100% 2e-127 93%
AF455692.1 Influenza A virus (A/Swine/North Carolina/98225/01(H1N2)) neuraminidase (NA) gene, complete cds 464 464 100% 2e-127 93%
AF251420.1 Influenza A virus (A/Swine/Iowa/569/99 (H3N2)) neuraminidase (NA) gene, complete cds 464 464 100% 2e-127 93%
EU857297.1 Influenza A virus (A/Hong Kong/CUHK4622/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857296.1 Influenza A virus (A/Hong Kong/CUHK4542/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857295.1 Influenza A virus (A/Hong Kong/CUHK4529/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857293.1 Influenza A virus (A/Hong Kong/CUHK4391/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857212.1 Influenza A virus (A/Hong Kong/CUHK22736/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857208.1 Influenza A virus (A/Hong Kong/CUHK22185/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857202.1 Influenza A virus (A/Hong Kong/CUHK22048/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857182.1 Influenza A virus (A/Hong Kong/CUHK20731/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857175.1 Influenza A virus (A/Hong Kong/CUHK20217/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857174.1 Influenza A virus (A/Hong Kong/CUHK20213/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857169.1 Influenza A virus (A/Hong Kong/CUHK20010/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857130.1 Influenza A virus (A/Hong Kong/CUHK12626/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857126.1 Influenza A virus (A/Hong Kong/CUHK12563/1997(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EU857107.1 Influenza A virus (A/Hong Kong/CUHK10632/1998(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EF584366.1 Influenza A virus (A/Athens/23/97 (H3N2)) segment 6 neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EF584363.1 Influenza A virus (A/Sydney/16/1997(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
EF584356.1 Influenza A virus (A/Victoria/106/1997(H3N2)) segment 6 neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
CY015518.1 Influenza A virus (A/New York/601/1996(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY011266.1 Influenza A virus (A/New York/559/1996(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY010606.1 Influenza A virus (A/New York/561/1996(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY009494.1 Influenza A virus (A/New York/570/1996(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY010062.1 Influenza A virus (A/New York/596/1996(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY010054.1 Influenza A virus (A/New York/595/1996(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY010006.1 Influenza A virus (A/New York/563/1996(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY009662.1 Influenza A virus (A/New York/568/1996(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY009486.1 Influenza A virus (A/New York/569/1997(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
AF533998.1 Influenza A virus (A/Buenos Aires/32/96(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
AF533997.1 Influenza A virus (A/Buenos Aires/4634/96(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
AF533995.1 Influenza A virus (A/Buenos Aires/4459/96(H3N2)) neuraminidase (NA) gene, complete cds 462 462 99% 7e-127 93%
CY008926.1 Influenza A virus (A/New York/504/1998(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY008934.1 Influenza A virus (A/New York/507/1997(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY008942.1 Influenza A virus (A/New York/514/1998(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY008958.1 Influenza A virus (A/New York/530/1998(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY008974.1 Influenza A virus (A/New York/549/1998(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY008534.1 Influenza A virus (A/New York/544/1998(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY008182.1 Influenza A virus (A/New York/502/1998(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%
CY007981.1 Influenza A virus (A/New York/526/1997(H3N2)) segment 6, complete sequence 462 462 99% 7e-127 93%

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Top 100 PB2 matches
JF346720.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 1100 1100 100% 0.0 100%
JF346713.1 Influenza A virus (A/swine/Korea/4381/2009(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 1100 1100 100% 0.0 100%
JF346716.1 Influenza A virus (A/swine/Korea/4456/2009(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 1092 1092 100% 0.0 99%
JF346715.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 1092 1092 100% 0.0 99%
JF346712.1 Influenza A virus (A/swine/Korea/4372/2009(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 1092 1092 100% 0.0 99%
EU798926.1 Influenza A virus (A/swine/Korea/PZ7/2006(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 1013 1013 100% 0.0 98%
EU798927.1 Influenza A virus (A/swine/Korea/PZ14/2006(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 1005 1005 100% 0.0 97%
EU798922.1 Influenza A virus (A/swine/Korea/JL02/2005(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 1005 1005 100% 0.0 97%
EU798925.1 Influenza A virus (A/swine/Korea/PZ4/2006(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 997 997 100% 0.0 97%
GU135864.1 Influenza A virus (A/swine/Iowa/H02NJ56371/2002(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 981 981 99% 0.0 97%
GU135872.1 Influenza A virus (A/swine/Iowa/H02NJ56391/2002(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 981 981 99% 0.0 97%
GU135907.1 Influenza A virus (A/swine/Iowa/H03G1/2003(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 981 981 99% 0.0 97%
GU135896.1 Influenza A virus (A/swine/Iowa/H02AS8/2002(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 973 973 99% 0.0 97%
GU135923.1 Influenza A virus (A/swine/Iowa/H03HO7/2003(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 973 973 99% 0.0 97%
GU135962.1 Influenza A virus (A/swine/Iowa/H03US3/2003(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 973 973 99% 0.0 97%
HM125972.1 Influenza A virus (A/swine/MN/48683/2002(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 973 973 99% 0.0 97%
FJ461607.1 Influenza A virus (A/swine/Korea/C13/2008(H5N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 973 973 100% 0.0 97%
GU135888.1 Influenza A virus (A/swine/Iowa/H03BF5/2003(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 967 967 98% 0.0 97%
GU135880.1 Influenza A virus (A/swine/Iowa/H02PW7/2002(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 965 965 99% 0.0 97%
GU135954.1 Influenza A virus (A/swine/Iowa/H03LS4/2003(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 965 965 99% 0.0 97%
GQ452242.1 Influenza A virus (A/swine/Iowa/H04YS2/2004(H1N1)) segment 1 polymerase PB2 (PB2) gene, partial cds 965 965 99% 0.0 97%
DQ923521.1 Influenza A virus (A/swine/Korea/CN22/2006(H3N1)) polymerase basic protein 2 (PB2) gene, complete cds 965 965 100% 0.0 96%
DQ280213.1 Influenza A virus (A/swine/Ontario/53518/03(H1N1)) polymerase subunit PB2 (PB2) gene, complete cds 965 965 99% 0.0 97%
AY129163.1 Influenza A virus (A/Swine/Korea/CY02/02(H1N2)) polymerase subunit 2 (PB2) mRNA, complete cds 965 965 99% 0.0 97%
GU135970.1 Influenza A virus (A/swine/Iowa/H03UWF2/2003(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 961 961 99% 0.0 96%
GU135938.1 Influenza A virus (A/swine/Iowa/H03LDH5/2003(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 957 957 99% 0.0 96%
EU798924.1 Influenza A virus (A/swine/Korea/Asan04/2006(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 957 957 99% 0.0 96%
EU798923.1 Influenza A virus (A/swine/Korea/JL04/2005(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 957 957 99% 0.0 96%
EU798921.1 Influenza A virus (A/swine/Korea/JL01/2005(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 957 957 99% 0.0 96%
EU798920.1 Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 957 957 99% 0.0 96%
EU409953.1 Influenza A virus (A/swine/Ohio/75004/2004(H1N1)) polymerase PB2 (PB2) gene, complete cds 957 957 99% 0.0 96%
DQ923520.1 Influenza A virus (A/swine/Korea/PZ72-1/2006(H3N1)) polymerase basic protein 2 (PB2) gene, complete cds 957 957 100% 0.0 96%
AF455737.1 Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2)) polymerase subunit (PB2) gene, complete cds 957 957 99% 0.0 96%
GU135946.1 Influenza A virus (A/swine/Iowa/H03LJ10/2003(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 954 954 99% 0.0 96%
DQ889682.1 Influenza A virus (A/Iowa/CEID23/2005(H1N1)) polymerase PB2 (PB2) gene, complete cds 950 950 99% 0.0 96%
DQ469995.1 Influenza A virus (A/turkey/Ontario/31232/2005(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 950 950 99% 0.0 96%
DQ469987.1 Influenza A virus (A/swine/Ontario/33853/2005(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 950 950 99% 0.0 96%
DQ469971.1 Influenza A virus (A/swine/British Columbia/28103/2005(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 950 950 99% 0.0 96%
DQ469955.1 Influenza A virus (A/Ontario/RV1273/2005(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 950 950 99% 0.0 96%
DQ150430.1 Influenza A virus (A/swine/IN/PU542/04 (H3N1)) polymerase (PB2) gene, complete cds 950 950 99% 0.0 96%
GU135930.1 Influenza A virus (A/swine/Iowa/H03HS5/2003(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 942 942 99% 0.0 96%
FJ410137.1 Influenza A virus (A/swine/Minnesota/1145/2007(H3N2)) segment 1, complete sequence 942 942 99% 0.0 96%
EU826550.2 Influenza A virus (A/swine/Quebec/4001/2005(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 942 942 99% 0.0 96%
EF551042.1 Influenza A virus (A/turkey/Illinois/2004(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 942 942 99% 0.0 96%
DQ469979.1 Influenza A virus (A/swine/Manitoba/12707/2005(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 942 942 99% 0.0 96%
DQ145540.1 Influenza A virus (A/swine/Minnesota/00395/2004(H3N1)) PB2 gene, complete cds 942 942 99% 0.0 96%
AF455738.1 Influenza A virus (A/Swine/Illinois/100084/01 (H1N2)) polymerase subunit (PB2) gene, complete cds 942 942 99% 0.0 96%
HM461759.1 Influenza A virus (A/swine/Minnesota/02053/2008(H1N1)) segment 1 polymerase PB2 (PB2) gene, partial cds 934 934 99% 0.0 96%
CY045564.1 Influenza A virus (A/swine/Oklahoma/008722/2007(H3N2)) segment 1 sequence 934 934 99% 0.0 96%
EU826558.2 Influenza A virus (A/mink/Nova Scotia/1055488/2007(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 934 934 99% 0.0 96%
EU798919.1 Influenza A virus (A/swine/Korea/CAS08/2005(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 934 934 99% 0.0 96%
EU735825.1 Influenza A virus (A/turkey/OH/313053/2004(H3N2)) polymerase PB2 (PB2) gene, complete cds 934 934 99% 0.0 96%
DQ469963.1 Influenza A virus (A/swine/Alberta/14722/2005(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 934 934 99% 0.0 96%
DQ335778.1 Influenza A virus (A/turkey/Ohio/313053/04(H3N2)) polymerase PB2 (PB2) gene, complete cds 934 934 99% 0.0 96%
FJ638311.1 Influenza A virus (A/swine/IL/07003243/2007(H1N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 926 926 99% 0.0 96%
CY035439.1 Influenza A virus (A/swine/Minnesota/SG-00242/2006(H3N2)) segment 1 sequence 926 926 99% 0.0 96%
CY035420.1 Influenza A virus (A/swine/Minnesota/SG-00236/2007(H3N2)) segment 1 sequence 926 926 99% 0.0 96%
CY035417.1 Influenza A virus (A/swine/Minnesota/SG-00235/2007(H3N2)) segment 1 sequence 926 926 99% 0.0 96%
EU735833.1 Influenza A virus (A/turkey/NC/353568/2005(H3N2)) polymerase PB2 (PB2) gene, complete cds 926 926 99% 0.0 96%
EU399758.1 Influenza A virus (A/Ontario/1252/2007(H3N2)) polymerase subunit PB2 (PB2) gene, complete cds 926 926 99% 0.0 96%
EU258942.1 Influenza A virus (A/swine/Missouri/2124514/2006(H2N3)) segment 1, complete sequence 926 926 99% 0.0 96%
HM461791.1 Influenza A virus (A/swine/Minnesota/02093/2008(H1N1)) segment 1 polymerase PB2 (PB2) gene, partial cds 918 918 99% 0.0 96%
CY033794.2 Influenza A virus (A/mallard/South Dakota/Sg-00128/2007(H3N2)) segment 1 sequence 918 918 99% 0.0 96%
CY032880.2 Influenza A virus (A/mallard/South Dakota/Sg-00127/2007(H3N2)) segment 1 sequence 918 918 99% 0.0 96%
CY032879.2 Influenza A virus (A/northern pintail/South Dakota/Sg-00126/2007(H3N2)) segment 1 sequence 918 918 99% 0.0 96%
CY032878.2 Influenza A virus (A/mallard/South Dakota/Sg-00125/2007(H3N2)) segment 1 sequence 918 918 99% 0.0 96%
FJ638303.1 Influenza A virus (A/swine/NC/00573/2005(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 918 918 99% 0.0 96%
CY035414.1 Influenza A virus (A/swine/Minnesota/SG-00234/2005(H3N2)) segment 1 sequence 918 918 99% 0.0 96%
EU798918.1 Influenza A virus (A/swine/Korea/CAN01/2004(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 918 918 99% 0.0 96%
EU743217.1 Influenza A virus (A/turkey/MN/366767/2005(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 918 918 99% 0.0 96%
EU409958.1 Influenza A virus (A/swine/Ohio/C62006/2006(H1N1)) polymerase PB2 (PB2) gene, partial cds 918 918 99% 0.0 96%
EU258950.1 Influenza A virus (A/swine/Missouri/4296424/2006(H2N3)) segment 1, complete sequence 918 918 99% 0.0 96%
GQ457546.1 Influenza A virus (A/Saskatchewan/5351/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 910 910 99% 0.0 95%
GQ457545.1 Influenza A virus (A/Saskatchewan/5350/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 910 910 99% 0.0 95%
GQ457544.1 Influenza A virus (A/Saskatchewan/5131/2009(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 910 910 99% 0.0 95%
FJ611896.1 Influenza A virus (A/swine/Minnesota/07002083/2007(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 910 910 99% 0.0 95%
FJ638295.1 Influenza A virus (A/swine/IL/00685/2005(H1N1)) segment 1 polymerase PB2 (PB2) gene, complete cds 910 910 99% 0.0 95%
CY035433.1 Influenza A virus (A/swine/Minnesota/SG-00240/2007(H1N1)) segment 1 sequence 910 910 99% 0.0 95%
CY035427.1 Influenza A virus (A/swine/Minnesota/SG-00238/2006(H1N1)) segment 1 sequence 910 910 99% 0.0 95%
EF551050.1 Influenza A virus (A/swine/North Carolina/2003(H3N2)) segment 1 polymerase PB2 (PB2) gene, complete cds 910 910 99% 0.0 95%
DQ150422.1 Influenza A virus (A/swine/MI/PU243/04 (H3N1)) polymerase (PB2) gene, complete cds 910 910 99% 0.0 95%
CY035436.1 Influenza A virus (A/swine/Minnesota/SG-00241/2007(H1N1)) segment 1 sequence 902 902 99% 0.0 95%
EU301177.2 Influenza A virus (A/swine/Korea/JNS06/2004(H3N2)) polymerase PB2 (PB2) gene, complete cds 902 902 99% 0.0 95%
HM461783.1 Influenza A virus (A/swine/Kentucky/02086/2008(H1N1)) segment 1 polymerase PB2 (PB2) gene, partial cds 894 894 99% 0.0 95%
HM461839.1 Influenza A virus (A/swine/Iowa/02096/2008(H1N1)) segment 1 polymerase PB2 (PB2) gene, partial cds 894 894 99% 0.0 95%
CY045684.1 Influenza A virus (A/swine/Oklahoma/020734-3/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045668.1 Influenza A virus (A/swine/Oklahoma/016179-9/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045660.1 Influenza A virus (A/swine/Oklahoma/016179-8/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045652.1 Influenza A virus (A/swine/Oklahoma/011521-4/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045644.1 Influenza A virus (A/swine/Oklahoma/011521-5/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045636.1 Influenza A virus (A/swine/Oklahoma/011289-8/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045628.1 Influenza A virus (A/swine/Oklahoma/011289-10/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045620.1 Influenza A virus (A/swine/Oklahoma/011289-9/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045612.1 Influenza A virus (A/swine/Oklahoma/010710-8/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY045604.1 Influenza A virus (A/swine/Oklahoma/010710-9/2008(H1N2)) segment 1 sequence 894 894 99% 0.0 95%
CY035423.1 Influenza A virus (A/swine/Minnesota/SG-00237/2007(H3N2)) segment 1 sequence 894 894 99% 0.0 95%
AF455736.1 Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2)) polymerase subunit (PB2) gene, complete cds 894 894 99% 0.0 95%
AF455733.1 Influenza A virus (A/Swine/North Carolina/93523/01 (H1N2)) polymerase subunit (PB2) gene, complete cds 894 894 99% 0.0 95%
JF346717.1 Influenza A virus (A/swine/Korea/4779/2010(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 886 886 99% 0.0 95%
HM461767.1 Influenza A virus (A/swine/Iowa/02039/2008(H1N2)) segment 1 polymerase PB2 (PB2) gene, partial cds 886 886 99% 0.0 95%

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Top 100 PB1 matches

JF346702.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 2 polymerase PB1 (PB1) gene, partial cds 1011 1011 100% 0.0 100%
JF346698.1 Influenza A virus (A/swine/Korea/4456/2009(H1N2)) segment 2 polymerase PB1 (PB1) gene, partial cds 1011 1011 100% 0.0 100%
JF346697.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 2 polymerase PB1 (PB1) gene, partial cds 1011 1011 100% 0.0 100%
JF346694.1 Influenza A virus (A/swine/Korea/4372/2009(H1N2)) segment 2 polymerase PB1 (PB1) gene, partial cds 1011 1011 100% 0.0 100%
EU798908.1 Influenza A virus (A/swine/Korea/CY08/2007(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 932 932 100% 0.0 98%
EU798907.1 Influenza A virus (A/swine/Korea/PZ14/2006(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 932 932 100% 0.0 98%
EU798906.1 Influenza A virus (A/swine/Korea/PZ7/2006(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 932 932 100% 0.0 98%
EU798902.1 Influenza A virus (A/swine/Korea/JL02/2005(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 932 932 100% 0.0 98%
EU798905.1 Influenza A virus (A/swine/Korea/PZ4/2006(H1N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 926 926 99% 0.0 98%
AY129162.1 Influenza A virus (A/Swine/Korea/CY02/02(H1N2)) polymerase subunit 1 (PB1) mRNA, complete cds 900 900 100% 0.0 97%
AF455729.1 Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2)) polymerase subunit (PB1) gene, complete cds 892 892 100% 0.0 97%
CY033790.2 Influenza A virus (A/mallard/South Dakota/Sg-00125/2007(H3N2)) segment 2 sequence 884 884 100% 0.0 96%
CY041877.1 Influenza A virus (A/mallard/South Dakota/Sg-00128/2007(H3N2)) segment 2 sequence 884 884 100% 0.0 96%
CY041869.1 Influenza A virus (A/mallard/South Dakota/Sg-00127/2007(H3N2)) segment 2 sequence 884 884 100% 0.0 96%
CY041861.1 Influenza A virus (A/northern pintail/South Dakota/Sg-00126/2007(H3N2)) segment 2 sequence 884 884 100% 0.0 96%
EU798904.1 Influenza A virus (A/swine/Korea/Asan04/2006(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 884 884 100% 0.0 96%
EU798903.1 Influenza A virus (A/swine/Korea/JL04/2005(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 884 884 100% 0.0 96%
EU798901.1 Influenza A virus (A/swine/Korea/JL01/2005(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 884 884 100% 0.0 96%
EU798900.1 Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 884 884 100% 0.0 96%
HM765430.1 Influenza A virus (A/swine/Heilongjiang/10/2007(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 876 876 100% 0.0 96%
EU301400.2 Influenza A virus (A/swine/Korea/JNS06/2004(H3N2)) polymerase PB1 (PB1) gene, complete cds 876 876 100% 0.0 96%
EU798912.1 Influenza A virus (A/swine/Korea/CAS09/2006(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 876 876 100% 0.0 96%
AF455724.1 Influenza A virus (A/Swine/North Carolina/98225/01(H1N2)) polymerase subunit (PB1) gene, complete cds 876 876 100% 0.0 96%
AF342823.1 Influenza A virus (A/Wisconsin/10/98 (H1N1)) PB1 gene, complete cds 876 876 100% 0.0 96%
AF251429.1 Influenza A virus (A/Swine/Minnesota/593/99 (H3N2)) PB1 polymerase subunit (PB1) gene, complete cds 876 876 100% 0.0 96%
AF251421.1 Influenza A virus (A/Swine/Iowa/569/99 (H3N2)) PB1 polymerase subunit (PB1) gene, complete cds 876 876 100% 0.0 96%
AF251413.1 Influenza A virus (A/Swine/Iowa/533/99 (H3N2)) PB1 polymerase subunit (PB1) gene, complete cds 876 876 100% 0.0 96%
AF251405.1 Influenza A virus (A/Swine/Nebraska/209/98 (H3N2)) PB1 polymerase subunit (PB1) gene, complete cds 876 876 100% 0.0 96%
AY060181.1 Influenza A virus (A/SW/MO/1877/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 872 872 98% 0.0 96%
HM461784.1 Influenza A virus (A/swine/Kentucky/02086/2008(H1N1)) segment 2 polymerase PB1 (PB1) gene, partial cds 868 868 100% 0.0 96%
EU798916.1 Influenza A virus (A/swine/Korea/CY09/2007(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 868 868 100% 0.0 96%
EU798914.1 Influenza A virus (A/swine/Korea/CY05/2007(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 868 868 100% 0.0 96%
EU798913.1 Influenza A virus (A/swine/Korea/CY04/2007(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 868 868 100% 0.0 96%
EU798911.1 Influenza A virus (A/swine/Korea/CAS07/2005(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 868 868 100% 0.0 96%
EU798910.1 Influenza A virus (A/swine/Korea/CAN04/2005(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 868 868 100% 0.0 96%
DQ923519.1 Influenza A virus (A/swine/Korea/CN22/2006(H3N1)) polymerase basic protein 1 (PB1) gene, complete cds 868 868 100% 0.0 96%
DQ923518.1 Influenza A virus (A/swine/Korea/PZ72-1/2006(H3N1)) polymerase basic protein 1 (PB1) gene, complete cds 868 868 100% 0.0 96%
AF455730.1 Influenza A virus (A/Swine/Illinois/100084/01 (H1N2)) polymerase subunit (PB1) gene, complete cds 868 868 100% 0.0 96%
AF455728.1 Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2)) polymerase subunit (PB1) gene, complete cds 868 868 99% 0.0 96%
AF455723.1 Influenza A virus (A/Swine/Ohio/891/01(H1N2)) polymerase subunit (PB1) gene, complete cds 868 868 100% 0.0 96%
GU135881.1 Influenza A virus (A/swine/Iowa/H02PW7/2002(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 860 860 100% 0.0 96%
GU135947.1 Influenza A virus (A/swine/Iowa/H03LJ10/2003(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 860 860 100% 0.0 96%
GQ452241.1 Influenza A virus (A/swine/Iowa/H04YS2/2004(H1N1)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 860 860 100% 0.0 96%
EU798917.1 Influenza A virus (A/swine/Korea/CY10/2007(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 860 860 99% 0.0 96%
AY233388.1 Influenza A virus (A/duck/NC/91347/01(H1N2)) polymerase subunit PB1 (PB1) gene, complete cds 860 860 100% 0.0 96%
AF455727.1 Influenza A virus (A/Swine/Iowa/930/01(H1N2)) polymerase subunit (PB1) gene, complete cds 860 860 99% 0.0 96%
AF250130.1 Influenza A virus (A/Swine/Indiana/9K035/99 (H1N2)) polymerase subunit PB1 (PB1) gene, complete cds 860 860 100% 0.0 96%
AY060196.1 Influenza A virus (A/SW/OH/7802/00(H1N2)) polymerase 1 protein (PB1) gene, partial cds 856 856 98% 0.0 96%
AY060195.1 Influenza A virus (A/SW/MN/34893/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 856 856 98% 0.0 96%
AY060174.1 Influenza A virus (A/SW/MN/3227/00(H1N2)) polymerase 1 protein (PB1) gene, partial cds 856 856 98% 0.0 96%
GU135865.1 Influenza A virus (A/swine/Iowa/H02NJ56371/2002(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 852 852 100% 0.0 96%
GU135873.1 Influenza A virus (A/swine/Iowa/H02NJ56391/2002(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 852 852 100% 0.0 96%
GU135889.1 Influenza A virus (A/swine/Iowa/H03BF5/2003(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 852 852 100% 0.0 96%
GU135908.1 Influenza A virus (A/swine/Iowa/H03G1/2003(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 852 852 100% 0.0 96%
EU798909.1 Influenza A virus (A/swine/Korea/CAS05/2004(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 852 852 100% 0.0 96%
DQ469972.1 Influenza A virus (A/swine/British Columbia/28103/2005(H3N2)) polymerase subunit PB1 (PB1) gene, complete cds 852 852 99% 0.0 96%
DQ145544.1 Influenza A virus (A/swine/Minnesota/00395/2004(H3N1)) PB1 gene, complete cds 852 852 100% 0.0 96%
AF455726.1 Influenza A virus (A/Swine/Minnesota/55551/00 (H1N2)) polymerase subunit (PB1) gene, complete cds 852 852 100% 0.0 96%
AY060194.1 Influenza A virus (A/SW/MN/23124-S/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060193.1 Influenza A virus (A/SW/MN/23124-T/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060192.1 Influenza A virus (A/SW/MN/22860-S/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060191.1 Influenza A virus (A/SW/MN/22860-T/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060184.1 Influenza A virus (A/SW/MN/13130/00(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060183.1 Influenza A virus (A/SW/MN/16356/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060182.1 Influenza A virus (A/SW/NE/21147/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
AY060177.1 Influenza A virus (A/SW/MN/12883/00(H1N2)) polymerase 1 protein (PB1) gene, partial cds 848 848 98% 0.0 96%
CY085660.1 Influenza A virus (A/swine/Hong Kong/1111/2004(H1N2)) polymerase PB1 (PB1) gene, partial cds; and PB1-F2 protein (PB1-F2) gene, complete cds 844 844 100% 0.0 95%
GU135897.1 Influenza A virus (A/swine/Iowa/H02AS8/2002(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 844 844 100% 0.0 95%
GU135924.1 Influenza A virus (A/swine/Iowa/H03HO7/2003(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 844 844 100% 0.0 95%
GU135939.1 Influenza A virus (A/swine/Iowa/H03LDH5/2003(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 844 844 99% 0.0 96%
GU135963.1 Influenza A virus (A/swine/Iowa/H03US3/2003(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 844 844 100% 0.0 95%
GQ229364.1 Influenza A virus (A/swine/Hong Kong/NS623/2002(H1N2)) segment 2 polymerase PB1 (PB1) gene, partial cds; and nonfunctional PB1-F2 protein (PB1-F2) gene, complete sequence 844 844 100% 0.0 95%
EU798915.1 Influenza A virus (A/swine/Korea/CY07/2007(H3N2)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 844 844 99% 0.0 96%
AY060185.1 Influenza A virus (A/SW/AR/12491/00(H1N2)) polymerase 1 protein (PB1) gene, partial cds 841 841 98% 0.0 96%
CY085604.1 Influenza A virus (A/swine/Hong Kong/1578/2003(H1N2)) polymerase PB1 (PB1) gene, partial cds; and PB1-F2 protein (PB1-F2) gene, complete cds 837 837 100% 0.0 95%
GU135955.1 Influenza A virus (A/swine/Iowa/H03LS4/2003(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 837 837 100% 0.0 95%
GU135971.1 Influenza A virus (A/swine/Iowa/H03UWF2/2003(H1N1)) segment 2 polymerase PB1 (PB1) gene, complete cds 837 837 100% 0.0 95%
HM461760.1 Influenza A virus (A/swine/Minnesota/02053/2008(H1N1)) segment 2 polymerase PB1 (PB1) gene, partial cds 837 837 99% 0.0 95%
FJ638304.1 Influenza A virus (A/swine/NC/00573/2005(H1N1)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 837 837 100% 0.0 95%
CY035415.1 Influenza A virus (A/swine/Minnesota/SG-00234/2005(H3N2)) segment 2 sequence 837 837 99% 0.0 95%
EU798899.1 Influenza A virus (A/swine/Korea/CAS08/2005(H1N1)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 837 837 100% 0.0 95%
EU798898.1 Influenza A virus (A/swine/Korea/CAN01/2004(H1N1)) segment 2 polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 837 837 100% 0.0 95%
EU735824.1 Influenza A virus (A/turkey/OH/313053/2004(H3N2)) polymerase PB1 (PB1) and PB1-F2 protein (PB1-F2) genes, complete cds 837 837 99% 0.0 95%
EU409954.1 Influenza A virus (A/swine/Ohio/75004/04(H1N1)) polymerase PB1 (PB1) gene, complete cds 837 837 100% 0.0 95%
EF551051.1 Influenza A virus (A/swine/North Carolina/2003(H3N2)) segment 2 polymerase PB1 (PB1) gene, complete cds 837 837 100% 0.0 95%
CY012222.1 Influenza A virus (A/New York/639/1995(H3N2)) segment 2, complete sequence 837 837 100% 0.0 95%
DQ469996.1 Influenza A virus (A/turkey/Ontario/31232/2005(H3N2)) polymerase subunit PB1 (PB1) gene, complete cds 837 837 99% 0.0 95%
DQ469988.1 Influenza A virus (A/swine/Ontario/33853/2005(H3N2)) polymerase subunit PB1 (PB1) gene, complete cds 837 837 99% 0.0 95%
DQ469964.1 Influenza A virus (A/swine/Alberta/14722/2005(H3N2)) polymerase subunit PB1 (PB1) gene, complete cds 837 837 99% 0.0 95%
DQ469956.1 Influenza A virus (A/Ontario/RV1273/2005(H3N2)) polymerase subunit PB1 (PB1) gene, complete cds 837 837 99% 0.0 95%
CY011822.1 Influenza A virus (A/New York/652/1996(H3N2)) segment 2, complete sequence 837 837 100% 0.0 95%
CY010730.1 Influenza A virus (A/New York/634/1995(H3N2)) segment 2, complete sequence 837 837 100% 0.0 95%
AY779266.1 Influenza A virus (A/turkey/Minnesota/764-2/03(H3N2)) polymerase basic protein 1 (PB1) gene, partial cds 837 837 100% 0.0 95%
AY779265.1 Influenza A virus (A/turkey/North Carolina/12344/03(H3N2)) polymerase basic protein 1 (PB1) gene, partial cds 837 837 100% 0.0 95%
AF455725.1 Influenza A virus (A/Swine/North Carolina/93523/01 (H1N2)) polymerase subunit (PB1) gene, complete cds 837 837 99% 0.0 95%
DQ335777.1 Influenza A virus (A/turkey/Ohio/313053/04(H3N2)) polymerase PB1 (PB1) gene, complete cds 837 837 99% 0.0 95%
U71131.1 Influenza A virus H3N2 A/Miyagi/29/95 PB1 polymerase subunit (PB1) gene, complete cds 837 837 100% 0.0 95%
U71130.1 Influenza A virus H3N2 A/Shiga/20/95 PB1 polymerase subunit (PB1) gene, complete cds 837 837 100% 0.0 95%
AY060197.1 Influenza A virus (A/SW/NC/45319/99(H1N2)) polymerase 1 protein (PB1) gene, partial cds 833 833 98% 0.0 95%
AY060190.1 Influenza A virus (A/SW/NE/18339/01(H1N2)) polymerase 1 protein (PB1) gene, partial cds 833 833 98% 0.0 95%

_________________
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Top 100 NP matches

JF346684.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 5 nucleocapsid protein (NP) gene, partial cds 862 862 100% 0.0 100%
JF346683.1 Influenza A virus (A/swine/Korea/4941/2010(H1N2)) segment 5 nucleocapsid protein (NP) gene, partial cds 862 862 100% 0.0 100%
JF346679.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 5 nucleocapsid protein (NP) gene, partial cds 862 862 100% 0.0 100%
JF346676.1 Influenza A virus (A/swine/Korea/4372/2009(H1N2)) segment 5 nucleocapsid protein (NP) gene, partial cds 862 862 100% 0.0 100%
EU798848.1 Influenza A virus (A/swine/Korea/CY08/2007(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 831 831 100% 0.0 99%
EU798847.1 Influenza A virus (A/swine/Korea/PZ14/2006(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 831 831 100% 0.0 99%
EU798846.1 Influenza A virus (A/swine/Korea/PZ7/2006(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 831 831 100% 0.0 99%
EU798845.1 Influenza A virus (A/swine/Korea/PZ4/2006(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 831 831 100% 0.0 99%
EU798842.1 Influenza A virus (A/swine/Korea/JL02/2005(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 831 831 100% 0.0 99%
EU798844.1 Influenza A virus (A/swine/Korea/Asan04/2006(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 807 807 100% 0.0 98%
EU798843.1 Influenza A virus (A/swine/Korea/JL04/2005(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 807 807 100% 0.0 98%
EU798841.1 Influenza A virus (A/swine/Korea/JL01/2005(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 807 807 100% 0.0 98%
EU798840.1 Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 807 807 100% 0.0 98%
GU135884.1 Influenza A virus (A/swine/Iowa/H02PW7/2002(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 799 799 100% 0.0 98%
GU135911.1 Influenza A virus (A/swine/Iowa/H03G1/2003(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 799 799 100% 0.0 98%
GU135934.1 Influenza A virus (A/swine/Iowa/H03HS5/2003(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 799 799 100% 0.0 98%
GU135966.1 Influenza A virus (A/swine/Iowa/H03US3/2003(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 799 799 100% 0.0 98%
HM125975.1 Influenza A virus (A/swine/MN/48683/2002(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 799 799 100% 0.0 98%
EU798839.1 Influenza A virus (A/swine/Korea/CAS08/2005(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 799 799 100% 0.0 98%
EU798838.1 Influenza A virus (A/swine/Korea/CAN01/2004(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 799 799 100% 0.0 98%
GU135958.1 Influenza A virus (A/swine/Iowa/H03LS4/2003(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 791 791 100% 0.0 97%
EU743213.1 Influenza A virus (A/turkey/MN/366767/2005(H3N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 791 791 100% 0.0 97%
DQ889686.1 Influenza A virus (A/Iowa/CEID23/2005(H1N1)) nucleoprotein (NP) gene, complete cds 791 791 100% 0.0 97%
DQ150434.1 Influenza A virus (A/swine/IN/PU542/04 (H3N1)) nucleoprotein (NP) gene, complete cds 785 785 100% 0.0 97%
GU135868.1 Influenza A virus (A/swine/Iowa/H02NJ56371/2002(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 783 783 99% 0.0 97%
GU135876.1 Influenza A virus (A/swine/Iowa/H02NJ56391/2002(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 783 783 99% 0.0 97%
GU135974.1 Influenza A virus (A/swine/Iowa/H03UWF2/2003(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
GQ452238.1 Influenza A virus (A/swine/Iowa/H04YS2/2004(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 783 783 100% 0.0 97%
EU697205.1 Influenza A virus (A/turkey/Minnesota/366767/2005(H3N2)) nucleocapsid protein (NP) gene, complete cds 783 783 100% 0.0 97%
EU735821.1 Influenza A virus (A/turkey/OH/313053/2004(H3N2)) nucleocapsid protein (NP) gene, complete cds 783 783 100% 0.0 97%
EF551054.1 Influenza A virus (A/swine/North Carolina/2003(H3N2)) segment 5 nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
EF551046.1 Influenza A virus (A/turkey/Illinois/2004(H3N2)) segment 5 nucleoprotein (NP) gene, partial cds 783 783 100% 0.0 97%
DQ469999.1 Influenza A virus (A/turkey/Ontario/31232/2005(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ469991.1 Influenza A virus (A/swine/Ontario/33853/2005(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ469983.1 Influenza A virus (A/swine/Manitoba/12707/2005(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ469975.1 Influenza A virus (A/swine/British Columbia/28103/2005(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ469967.1 Influenza A virus (A/swine/Alberta/14722/2005(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ469959.1 Influenza A virus (A/Ontario/RV1273/2005(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ150426.1 Influenza A virus (A/swine/MI/PU243/04 (H3N1)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
AF455699.1 Influenza A virus (A/Swine/Ohio/891/01(H1N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
DQ335774.1 Influenza A virus (A/turkey/Ohio/313053/04(H3N2)) nucleoprotein (NP) gene, complete cds 783 783 100% 0.0 97%
AF342819.1 Influenza A virus (A/Wisconsin/10/98 (H1N1)) nucleoprotein gene, complete cds 783 783 100% 0.0 97%
GU135892.1 Influenza A virus (A/swine/Iowa/H03BF5/2003(H3N2)) segment 5 nucleoprotein (NP) gene, complete cds 775 775 100% 0.0 97%
GU135926.1 Influenza A virus (A/swine/Iowa/H03HO7/2003(H3N2)) segment 5 nucleoprotein (NP) gene, complete cds 775 775 100% 0.0 97%
HM461787.1 Influenza A virus (A/swine/Kentucky/02086/2008(H1N1)) segment 5 nucleocapsid protein (NP) gene, partial cds 775 775 100% 0.0 97%
CY041880.1 Influenza A virus (A/mallard/South Dakota/Sg-00128/2007(H3N2)) segment 5 sequence 775 775 100% 0.0 97%
CY041872.1 Influenza A virus (A/mallard/South Dakota/Sg-00127/2007(H3N2)) segment 5 sequence 775 775 100% 0.0 97%
CY041864.1 Influenza A virus (A/northern pintail/South Dakota/Sg-00126/2007(H3N2)) segment 5 sequence 775 775 100% 0.0 97%
CY041856.1 Influenza A virus (A/mallard/South Dakota/Sg-00125/2007(H3N2)) segment 5 sequence 775 775 100% 0.0 97%
EU826545.2 Influenza A virus (A/swine/Quebec/4001/2005(H3N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 775 775 100% 0.0 97%
EU258936.1 Influenza A virus (A/swine/Missouri/2124514/2006(H2N3)) segment 5, complete sequence 775 775 100% 0.0 97%
AY129159.1 Influenza A virus (A/Swine/Korea/CY02/02(H1N2)) nucleoprotein (NP) mRNA, complete cds 775 775 100% 0.0 97%
GU135950.1 Influenza A virus (A/swine/Iowa/H03LJ10/2003(H1N1)) segment 5 nucleoprotein (NP) gene, complete cds 767 767 100% 0.0 97%
HM461763.1 Influenza A virus (A/swine/Minnesota/02053/2008(H1N1)) segment 5 nucleocapsid protein (NP) gene, partial cds 767 767 100% 0.0 97%
HM461803.1 Influenza A virus (A/swine/Minnesota/02011/2008(H1N2)) segment 5 nucleocapsid protein (NP) gene, partial cds 767 767 100% 0.0 97%
HM461811.1 Influenza A virus (A/swine/Missouri/02060/2008(H1N1)) segment 5 nucleocapsid protein (NP) gene, complete cds 767 767 100% 0.0 97%
CY045712.1 Influenza A virus (A/swine/Oklahoma/042169/2008(H1N2)) segment 5 sequence 767 767 100% 0.0 97%
CY045560.1 Influenza A virus (A/swine/Kansas/015252/2009(H3N2)) segment 5 sequence 767 767 100% 0.0 97%
CY045552.1 Influenza A virus (A/swine/Oklahoma/001142/2009(H3N2)) segment 5 sequence 767 767 100% 0.0 97%
CY041904.1 Influenza A virus (A/swine/Minnesota/SG-00239/2007(H1N2)) segment 5 sequence 767 767 100% 0.0 97%
EU826554.2 Influenza A virus (A/mink/Nova Scotia/1055488/2007(H3N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 767 767 100% 0.0 97%
AF455706.1 Influenza A virus (A/Swine/Illinois/100084/01 (H1N2)) nucleoprotein (NP) gene, complete cds 767 767 100% 0.0 97%
AF455704.1 Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2)) nucleoprotein (NP) gene, complete cds 767 767 100% 0.0 97%
AF153253.1 Influenza A virus (A/Swine/Texas/4199-2/98 (H3N2)) segment 5 nucleoprotein gene, partial cds 767 767 100% 0.0 97%
HM461771.1 Influenza A virus (A/swine/Iowa/02039/2008(H1N2)) segment 5 nucleocapsid protein (NP) gene, partial cds 759 759 100% 0.0 97%
HM461795.1 Influenza A virus (A/swine/Minnesota/02093/2008(H1N1)) segment 5 nucleocapsid protein (NP) gene, partial cds 759 759 100% 0.0 97%
HM461835.1 Influenza A virus (A/swine/Nebraska/02013/2008(H1N1)) segment 5 nucleocapsid protein (NP) gene, partial cds 759 759 100% 0.0 97%
CY045704.1 Influenza A virus (A/swine/Oklahoma/020736-1/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045696.1 Influenza A virus (A/swine/Oklahoma/020736-2/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045688.1 Influenza A virus (A/swine/Oklahoma/020734-3/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045680.1 Influenza A virus (A/swine/Oklahoma/020734-2/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045672.1 Influenza A virus (A/swine/Oklahoma/016179-9/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045664.1 Influenza A virus (A/swine/Oklahoma/016179-8/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045656.1 Influenza A virus (A/swine/Oklahoma/011521-4/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045648.1 Influenza A virus (A/swine/Oklahoma/011521-5/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045640.1 Influenza A virus (A/swine/Oklahoma/011289-8/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045624.1 Influenza A virus (A/swine/Oklahoma/011289-9/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045616.1 Influenza A virus (A/swine/Oklahoma/010710-8/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045608.1 Influenza A virus (A/swine/Oklahoma/010710-9/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045600.1 Influenza A virus (A/swine/Oklahoma/010226-17/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045592.1 Influenza A virus (A/swine/Oklahoma/010226-16/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045544.1 Influenza A virus (A/swine/Oklahoma/053259/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045536.1 Influenza A virus (A/swine/Texas/050625/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045528.1 Influenza A virus (A/swine/Texas/050593/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
CY045520.1 Influenza A virus (A/swine/Oklahoma/032726/2008(H1N2)) segment 5 sequence 759 759 100% 0.0 97%
FJ461599.1 Influenza A virus (A/swine/Korea/C13/2008(H5N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 759 759 100% 0.0 97%
EU798856.1 Influenza A virus (A/swine/Korea/CY09/2007(H3N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 759 759 100% 0.0 97%
EU798854.1 Influenza A virus (A/swine/Korea/CY05/2007(H3N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 759 759 100% 0.0 97%
EU798853.1 Influenza A virus (A/swine/Korea/CY04/2007(H3N2)) segment 5 nucleocapsid protein (NP) gene, complete cds 759 759 100% 0.0 97%
EU735829.1 Influenza A virus (A/turkey/NC/353568/2005(H3N2)) nucleocapsid protein (NP) gene, complete cds 759 759 100% 0.0 97%
EU258946.1 Influenza A virus (A/swine/Missouri/4296424/2006(H2N3)) segment 5, complete sequence 759 759 100% 0.0 97%
DQ666947.1 Influenza A virus (A/swine/Korea/S15/2006(H1N2)) segment 5 nucleoprotein gene, complete cds 759 759 100% 0.0 97%
DQ666936.1 Influenza A virus (A/swine/Korea/S11/2005(H1N2)) segment 5 nucleoprotein gene, complete cds 759 759 100% 0.0 97%
DQ666928.1 Influenza A virus (A/swine/Korea/S5/2005(H1N2)) segment 5 nucleoprotein gene, complete cds 759 759 100% 0.0 97%
DQ923513.1 Influenza A virus (A/swine/Korea/CN22/2006(H3N1)) nucleoprotein (NP) gene, complete cds 759 759 100% 0.0 97%
DQ923512.1 Influenza A virus (A/swine/Korea/PZ72-1/2006(H3N1)) nucleoprotein (NP) gene, complete cds 759 759 100% 0.0 97%
AY038019.1 Influenza A virus (A/Turkey/MO/24093/99(H1N2)) nucleoprotein (NP) gene, partial cds 759 759 100% 0.0 97%
AF455705.1 Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2)) nucleoprotein (NP) gene, complete cds 759 759 100% 0.0 97%
CY045568.1 Influenza A virus (A/swine/Oklahoma/008722/2007(H3N2)) segment 5 sequence 755 755 100% 0.0 96%
EU697210.1 Influenza A virus (A/turkey/North Carolina/353568/2005(H3N2)) nucleocapsid protein (NP) gene, complete cds 755 755 100% 0.0 96%

_________________
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Top 100 MP matches

CY087025.1 Influenza A virus (A/New York/4557/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY087017.1 Influenza A virus (A/New York/4764/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY087009.1 Influenza A virus (A/New York/3565/2009(H1N1)) matrix protein 1 (M1) and matrix protein 2 (M2) genes, partial cds 315 315 100% 5e-83 100%
CY087001.1 Influenza A virus (A/New York/3256/2009(N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY086994.1 Influenza A virus (A/New York/3251/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY086978.1 Influenza A virus (A/New York/3217/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY086970.1 Influenza A virus (A/New York/3198/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY086941.1 Influenza A virus (A/swine/Minnesota/340304/2010(H1N2)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY086939.1 Influenza A virus (A/swine/North Carolina/239108/2010(H1N2)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY086931.1 Influenza A virus (A/swine/Minnesota/239106/2010(H1N2)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY086923.1 Influenza A virus (A/swine/Minnesota/239105/2009(H3N2)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY086915.1 Influenza A virus (A/swine/Minnesota/226128/2010(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY086907.1 Influenza A virus (A/swine/North Carolina/226126/2010(H1N2)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY086899.1 Influenza A virus (A/swine/North Carolina/226125/2010(H1N2)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY086891.1 Influenza A virus (A/swine/North Carolina/226124/2010(H1N2)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY086883.1 Influenza A virus (A/swine/Indiana/240218/2010(H1N2)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY040718.2 Influenza A virus (A/New York/3238/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
JF346693.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 7 matrix protein 1 (M1) gene, partial cds 315 315 100% 5e-83 100%
JF346692.1 Influenza A virus (A/swine/Korea/4941/2010(H1N2)) segment 7 matrix protein 1 (M1) gene, partial cds 315 315 100% 5e-83 100%
JF346691.1 Influenza A virus (A/swine/Korea/4940/2010(H1N2)) segment 7 matrix protein 1 (M1) gene, partial cds 315 315 100% 5e-83 100%
JF346687.1 Influenza A virus (A/swine/Korea/4382/2009(H1N2)) segment 7 matrix protein 1 (M1) gene, partial cds 315 315 100% 5e-83 100%
CY084463.1 Influenza A virus (A/New York/6537/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY084455.1 Influenza A virus (A/New York/6418/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY084447.1 Influenza A virus (A/New York/6902/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY084439.1 Influenza A virus (A/New York/6064/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083943.1 Influenza A virus (A/San Diego/INS194/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083927.1 Influenza A virus (A/Warsaw/INS148/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083911.1 Influenza A virus (A/Aalborg/INS132/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083895.1 Influenza A virus (A/San Diego/INS73/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083887.1 Influenza A virus (A/San Diego/INS72/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083879.1 Influenza A virus (A/San Diego/INS50/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083871.1 Influenza A virus (A/San Diego/INS49/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083863.1 Influenza A virus (A/District of Columbia/INS47/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083855.1 Influenza A virus (A/Pensacola/INS39/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083847.1 Influenza A virus (A/District of Columbia/INS23/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083839.1 Influenza A virus (A/San Diego/INS14/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083831.1 Influenza A virus (A/San Diego/INS07/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083826.1 Influenza A virus (A/Wroclaw/INS435/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083818.1 Influenza A virus (A/Los Angeles/INS423/2010(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083813.1 Influenza A virus (A/Athens/INS387/2010) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083806.1 Influenza A virus (A/Madrid/INS377/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083798.1 Influenza A virus (A/Berlin/INS362/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083795.1 Influenza A virus (A/Athens/INS328/2009) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083785.1 Influenza A virus (A/Madrid/INS297/2009(N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083769.1 Influenza A virus (A/Athens/INS256/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083762.1 Influenza A virus (A/Aarhus/INS239/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083754.1 Influenza A virus (A/Brussels/INS205/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083746.1 Influenza A virus (A/Barcelona/INS189/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083738.1 Influenza A virus (A/Madrid/INS130/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083730.1 Influenza A virus (A/Bochum/INS120/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083722.1 Influenza A virus (A/District of Columbia/INS115/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083714.1 Influenza A virus (A/Madrid/INS112/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083699.1 Influenza A virus (A/Warsaw/INS99/2009(mixed)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083691.1 Influenza A virus (A/Terrassa/INS94/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083678.1 Influenza A virus (A/Madrid/INS77/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083662.1 Influenza A virus (A/San Diego/INS41/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083656.1 Influenza A virus (A/San Diego/INS36/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083648.1 Influenza A virus (A/District of Columbia/INS22/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083640.1 Influenza A virus (A/San Diego/INS13/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083618.1 Influenza A virus (A/Lima/WRAIR9202F/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083610.1 Influenza A virus (A/Managua/WRAIR8997F/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083602.1 Influenza A virus (A/Managua/WRAIR8964F/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083594.1 Influenza A virus (A/Lima/WRAIR8893F/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083586.1 Influenza A virus (A/Lima/WRAIR8689F/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083578.1 Influenza A virus (A/Lima/WRAIR8648F/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083570.1 Influenza A virus (A/Lima/WRAIR8511F/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083562.1 Influenza A virus (A/Budapest/WRAIR2411N/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083554.1 Influenza A virus (A/Budapest/WRAIR2393T/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083546.1 Influenza A virus (A/Budapest/WRAIR2393N/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083538.1 Influenza A virus (A/Mexico City/WRAIR1752N/2010(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083522.1 Influenza A virus (A/Lima/WRAIR1695P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083514.1 Influenza A virus (A/Piura/WRAIR1694P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083506.1 Influenza A virus (A/Managua/WRAIR1693P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083498.1 Influenza A virus (A/Chicago/WRAIR1691P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083490.1 Influenza A virus (A/Mexico City/WRAIR1691N/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083482.1 Influenza A virus (A/Chicago/WRAIR1690P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083474.1 Influenza A virus (A/Managua/WRAIR1689P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083466.1 Influenza A virus (A/Lima/WRAIR1688P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083450.1 Influenza A virus (A/Mexico City/WRAIR1679N/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083442.1 Influenza A virus (A/Ft.Benning/WRAIR1669P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083426.1 Influenza A virus (A/San Diego/WRAIR1667P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083418.1 Influenza A virus (A/San Diego/WRAIR1666P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083410.1 Influenza A virus (A/San Diego/WRAIR1665P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083402.1 Influenza A virus (A/Great Lakes/WRAIR1664P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083394.1 Influenza A virus (A/San Diego/WRAIR1663P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083386.1 Influenza A virus (A/San Diego/WRAIR1662P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083378.1 Influenza A virus (A/Pendleton/WRAIR1661P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083370.1 Influenza A virus (A/South Carolina/WRAIR1660P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083362.1 Influenza A virus (A/San Diego/WRAIR1658P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083354.1 Influenza A virus (A/San Diego/WRAIR1657P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083347.1 Influenza A virus (A/San Diego/WRAIR1656P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083339.1 Influenza A virus (A/San Diego/WRAIR1654P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083323.1 Influenza A virus (A/Great Lakes/WRAIR1652P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083315.1 Influenza A virus (A/San Diego/WRAIR1649P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083307.1 Influenza A virus (A/San Diego/WRAIR1648P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083299.1 Influenza A virus (A/San Diego/WRAIR1647P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083291.1 Influenza A virus (A/San Diego/WRAIR1646P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083275.1 Influenza A virus (A/San Diego/WRAIR1644P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083267.1 Influenza A virus (A/San Diego/WRAIR1643P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%
CY083259.1 Influenza A virus (A/San Diego/WRAIR1642P/2009(H1N1)) matrix protein 2 (M2) and matrix protein 1 (M1) genes, complete cds 315 315 100% 5e-83 100%

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Top 100 NS matches

JF346747.1 Influenza A virus (A/swine/Korea/5008/2010(H1N2)) segment 8 nonstructural protein 1 (NS1) and nuclear export protein (NEP) genes, partial cds 1243 1243 100% 0.0 100%
JF346746.1 Influenza A virus (A/swine/Korea/4941/2010(H1N2)) segment 8 nonstructural protein 1 (NS1) and nuclear export protein (NEP) genes, partial cds 1243 1243 100% 0.0 100%
JF346745.1 Influenza A virus (A/swine/Korea/4940/2010(H1N2)) segment 8 nonstructural protein 1 (NS1) and nuclear export protein (NEP) genes, partial cds 1243 1243 100% 0.0 100%
JF346744.1 Influenza A virus (A/swine/Korea/4779/2010(H1N2)) segment 8 nonstructural protein 1 (NS1) and nuclear export protein (NEP) genes, partial cds 1243 1243 100% 0.0 100%
JF346742.1 Influenza A virus (A/swine/Korea/4383/2009(H1N2)) segment 8 nonstructural protein 1 (NS1) and nuclear export protein (NEP) genes, partial cds 1243 1243 100% 0.0 100%
CY087020.1 Influenza A virus (A/New York/4764/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY087012.1 Influenza A virus (A/New York/3565/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY086997.1 Influenza A virus (A/New York/3251/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY086973.1 Influenza A virus (A/New York/3198/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY086952.1 Influenza A virus (A/swine/Thailand/CU-M8_2/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY040721.2 Influenza A virus (A/New York/3238/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
JF327344.1 Influenza A virus (A/Finland/671/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY084466.1 Influenza A virus (A/New York/6537/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083946.1 Influenza A virus (A/San Diego/INS194/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083930.1 Influenza A virus (A/Warsaw/INS148/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083874.1 Influenza A virus (A/San Diego/INS49/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083834.1 Influenza A virus (A/San Diego/INS07/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083829.1 Influenza A virus (A/Wroclaw/INS435/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083801.1 Influenza A virus (A/Berlin/INS362/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083757.1 Influenza A virus (A/Brussels/INS205/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083694.1 Influenza A virus (A/Terrassa/INS94/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083665.1 Influenza A virus (A/San Diego/INS41/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083555.1 Influenza A virus (A/Budapest/WRAIR2393T/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083547.1 Influenza A virus (A/Budapest/WRAIR2393N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083491.1 Influenza A virus (A/Mexico City/WRAIR1691N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083451.1 Influenza A virus (A/Mexico City/WRAIR1679N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083443.1 Influenza A virus (A/Ft.Benning/WRAIR1669P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083435.1 Influenza A virus (A/San Diego/WRAIR1668P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083411.1 Influenza A virus (A/San Diego/WRAIR1665P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083395.1 Influenza A virus (A/San Diego/WRAIR1663P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083387.1 Influenza A virus (A/San Diego/WRAIR1662P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083379.1 Influenza A virus (A/Pendleton/WRAIR1661P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083371.1 Influenza A virus (A/South Carolina/WRAIR1660P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083348.1 Influenza A virus (A/San Diego/WRAIR1656P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083260.1 Influenza A virus (A/San Diego/WRAIR1642P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083204.1 Influenza A virus (A/South Carolina/WRAIR1503P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083196.1 Influenza A virus (A/California/WRAIR1502P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083188.1 Influenza A virus (A/South Carolina/WRAIR1501P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083180.1 Influenza A virus (A/South Carolina/WRAIR1500P/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083148.1 Influenza A virus (A/Bishkek/WRAIR0883N/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083124.1 Influenza A virus (A/Quito/WRAIR0617T/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083060.1 Influenza A virus (A/Colorado/WRAIR0353S/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY083052.1 Influenza A virus (A/Lima/WRAIR0285F/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY081129.3 Influenza A virus (A/Thailand/CU-C1028/2010(H1N1)) nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
CY081530.1 Influenza A virus (A/Cambodia/NHRCC00006/2009(H1N1)) nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY081123.1 Influenza A virus (A/Thailand/CU-C1025/2010(H1N1)) nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
CY081117.1 Influenza A virus (A/Thailand/CU-C1006/2010(H1N1)) nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
CY081111.1 Influenza A virus (A/Thailand/CU-C1005/2010(H1N1)) nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
CY050371.1 Influenza A virus (A/Korea/S1/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
HQ240370.1 Influenza A virus (A/Canada-AB/RV2735/2009(H1N1)) segment 8 nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
HQ240243.1 Influenza A virus (A/Canada-MB/RV0062-10/2009(H1N1)) segment 8 nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1235 1235 100% 0.0 99%
HQ840321.1 Influenza A virus (A/swine/Minnesota/165A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HQ840313.1 Influenza A virus (A/swine/Minnesota/136B/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HQ840308.1 Influenza A virus (A/swine/Minnesota/130A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HQ840300.1 Influenza A virus (A/swine/Minnesota/130A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HQ840294.1 Influenza A virus (A/swine/Minnesota/074A/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY074044.1 Influenza A virus (A/Argentina/HNRG45/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074034.1 Influenza A virus (A/Argentina/HNRG36/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074029.1 Influenza A virus (A/Argentina/HNRG33/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074024.1 Influenza A virus (A/Argentina/HNRG32/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074014.1 Influenza A virus (A/Argentina/HNRG21/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY074004.1 Influenza A virus (A/Argentina/HNRG14/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY073999.1 Influenza A virus (A/Argentina/HNRG107/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
CY073978.1 Influenza A virus (A/Argentina/HNRG104/2009(H1N1)) segment 8 sequence 1235 1235 100% 0.0 99%
HQ011422.1 Influenza A virus (A/Guangdong/45/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY069238.1 Influenza A virus (A/Munich/INS365/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069198.1 Influenza A virus (A/Athens/INS358/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069166.1 Influenza A virus (A/Athens/INS353/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069142.1 Influenza A virus (A/Madrid/INS300/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069134.1 Influenza A virus (A/Madrid/INS299/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069126.1 Influenza A virus (A/Madrid/INS298/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069102.1 Influenza A virus (A/Guam/NHRC0027/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069070.1 Influenza A virus (A/Guam/NHRC0023/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069062.1 Influenza A virus (A/Guam/NHRC0022/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069046.1 Influenza A virus (A/Guam/NHRC0020/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069030.1 Influenza A virus (A/Guam/NHRC0018/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY069006.1 Influenza A virus (A/Guam/NHRC0015/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY068990.1 Influenza A virus (A/Guam/NHRC0013/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY068942.1 Influenza A virus (A/Guam/NHRC0008/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
HM855251.1 Influenza A virus (A/Meru/456/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HM855245.1 Influenza A virus (A/Trans-nzoia/168/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HM855244.1 Influenza A virus (A/Eldoret/120/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HM855243.1 Influenza A virus (A/Keiyo/96/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HM855242.1 Influenza A virus (A/Garissa/78/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
HM780486.1 Influenza A virus (A/Guangdong/0862/2009(H1N1)) segment 8 nuclear export protein (NEP) and nonstructural protein 1 (NS1) genes, complete cds 1235 1235 100% 0.0 99%
CY067171.1 Influenza A virus (A/Bonn/INS280/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY067043.1 Influenza A virus (A/Aarhus/INS252/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY067027.1 Influenza A virus (A/Bochum/INS250/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY067019.1 Influenza A virus (A/Bochum/INS249/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066987.1 Influenza A virus (A/Brussels/INS243/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066963.1 Influenza A virus (A/Aarhus/INS240/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066955.1 Influenza A virus (A/Aarhus/INS238/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066931.1 Influenza A virus (A/Pensacola/INS235/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066923.1 Influenza A virus (A/Pensacola/INS234/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066915.1 Influenza A virus (A/Pensacola/INS233/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066859.1 Influenza A virus (A/District of Columbia/INS226/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066851.1 Influenza A virus (A/Madrid/INS225/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066827.1 Influenza A virus (A/Antwerp/INS221/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
CY066787.1 Influenza A virus (A/San Diego/INS214/2009(H1N1)) segment 8, complete sequence 1235 1235 100% 0.0 99%
HQ240242.1 Influenza A virus (A/Canada-NB/RV0005-10/2009(H1N1)) segment 8 nuclear export protein (NEP) gene, partial cds; and nonstructural protein 1 (NS1) gene, complete cds 1231 1231 100% 0.0 99%

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A/swine/Korea/4383/2009 is another earlier isolate, which is trH1N2 with a pandemic H1N1 NS gene segment.

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