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niman
 Post subject: S188T In Australia
PostPosted: Fri Feb 04, 2011 8:13 am 
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WHO Collaborating Centre for Reference and Research on Influenza in Australia released 16 sequences from late 2010, early 2011 (4 were from December or January). 9 had S188T and 2 had S186P.

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niman
 Post subject: Re: S188T In Australia
PostPosted: Fri Feb 04, 2011 8:14 am 
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S188T

EPI302426 A/VICTORIA/663/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.96972
EPI302417 A/VICTORIA/500/2011 (A/H1N1 swl) segment 4 (HA) 27.0 5.96972
EPI302409 A/VICTORIA/1026/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.96972
EPI302386 A/TOWNSVILLE/72/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.96972
EPI302364 A/SYDNEY/31/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.96972
EPI302356 A/PERTH/198/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.96972
EPI302348 A/DARWIN/178/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.96972
EPI302345 A/BRUNEI/237/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.96972
EPI302344 A/BRISBANE/209/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.96972

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niman
 Post subject: Re: S188T In Australia
PostPosted: Fri Feb 04, 2011 8:15 am 
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S186P

EPI302414 A/VICTORIA/1204/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.96979
EPI302411 A/VICTORIA/1202/2010 (A/H1N1 swl) segment 4 (HA) 27.0 5.96979

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Dingo
 Post subject: Re: S188T In Australia
PostPosted: Fri Feb 04, 2011 8:16 am 
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niman wrote:
WHO Collaborating Centre for Reference and Research on Influenza in Australia released 16 sequences from late 2010, early 2011 (4 were from December or January). 9 had S188T and 2 had S186P.


From memory, weren't these first found in Australia from October?
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niman
 Post subject: Re: S188T In Australia
PostPosted: Fri Feb 04, 2011 8:23 am 
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Dingo wrote:
niman wrote:
WHO Collaborating Centre for Reference and Research on Influenza in Australia released 16 sequences from late 2010, early 2011 (4 were from December or January). 9 had S188T and 2 had S186P.


From memory, weren't these first found in Australia from October?

They were in Australia in October, but first appeared there in the summer (but frequency is clearly rising).

S186P was in Canberra in August. S188T was in Victoria in July.

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Dingo
 Post subject: Re: S188T In Australia
PostPosted: Fri Feb 04, 2011 8:42 am 
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niman wrote:
Dingo wrote:
niman wrote:
WHO Collaborating Centre for Reference and Research on Influenza in Australia released 16 sequences from late 2010, early 2011 (4 were from December or January). 9 had S188T and 2 had S186P.


From memory, weren't these first found in Australia from October?

They were in Australia in October, but first appeared there in the summer (but frequency is clearly rising).

S186P was in Canberra in August. S188T was in Victoria in July.


You mean our last winter?
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niman
 Post subject: Re: S188T In Australia
PostPosted: Fri Feb 04, 2011 8:47 am 
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Location: Pittsburgh, PA USA
Dingo wrote:
niman wrote:
Dingo wrote:
From memory, weren't these first found in Australia from October?

They were in Australia in October, but first appeared there in the summer (but frequency is clearly rising).

S186P was in Canberra in August. S188T was in Victoria in July.


You mean our last winter?

Yes, July and August, as indicated.

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niman
 Post subject: Re: S188T In Australia
PostPosted: Fri Feb 04, 2011 8:54 am 
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A/VICTORIA/1204/2010 has S186P and patient (20M) was vaccinated in 2010 and was part of an October cluster.

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niman
 Post subject: Re: S188T In Australia
PostPosted: Fri Feb 04, 2011 8:59 am 
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niman wrote:
A/VICTORIA/1204/2010 has S186P and patient (20M) was vaccinated in 2010 and was part of an October cluster.

A/VICTORIA/1202/2010 (21M) also has S186P, was also in the October cluster, and was also vaccinated and antigenic characterization did NOT indicate the isolate was a low reactor.

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Dingo
 Post subject: Re: S188T In Australia
PostPosted: Fri Feb 04, 2011 9:34 am 
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niman wrote:
Yes, July and August, as indicated.


Thanks.
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