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LOCUS CY081580 1773 bp cRNA linear VRL 06-FEB-2011 DEFINITION Influenza A virus (A/Beijing/3872/2010(H1N1)) hemagglutinin (HA) gene, complete cds. ACCESSION CY081580 VERSION CY081580.1 GI:322359397 DBLINK Project: 37813 KEYWORDS . SOURCE Influenza A virus (A/Beijing/3872/2010(H1N1)) ORGANISM Influenza A virus (A/Beijing/3872/2010(H1N1)) Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A. REFERENCE 1 (bases 1 to 1773) AUTHORS Liu,W., Wei,M., Zhang,L., Tang,F., Yang,J., Xu,L., Li,Z., Yang,H. and Cao,W. TITLE Outbreak of pandemic influenza A H1N1 in Beijing, 2010 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1773) AUTHORS Liu,W., Wei,M., Zhang,L., Tang,F., Yang,J., Xu,L., Li,Z., Yang,H. and Cao,W. TITLE Direct Submission JOURNAL Submitted (06-FEB-2011) Epidemiology, Beijing Institute of Microbiology and Epidemiology, 20#, Dongdajie Street, Fengtai District, Beijing 100071, China FEATURES Location/Qualifiers source 1..1773 /organism="Influenza A virus (A/Beijing/3872/2010(H1N1))" /mol_type="viral cRNA" /strain="A/Beijing/3872/2010" /serotype="H1N1" /isolation_source="NASAL swab" /host="human" /db_xref="taxon:981229" /segment="4" /country="China: Beijing" /collection_date="Nov-2010" gene 29..1729 /gene="HA" CDS 29..1729 /gene="HA" /function="receptor binding and fusion protein" /codon_start=1 /product="hemagglutinin" /protein_id="ADW95319.1" /db_xref="GI:322359398" /translation="MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVT HSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSS DNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKG FYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTTADQQSLYQNADTYVFV GTSRYSKKFKPEIAIRPKVRDQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMER NAGSGIIISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATG LRNVPSIQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEI TNKVNSVIEKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER TLDYHDSNVKNLYEKVRNQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSE EAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAISFWMCSNGSLQCRICI " sig_peptide 29..79 /gene="HA" mat_peptide 80..1060 /gene="HA" /product="HA1" mat_peptide 1061..1726 /gene="HA" /product="HA2" ORIGIN 1 aaagcagggg aaaacaaaag caacaaaaat gaaggcaata ctagtagttc tgctatatac 61 atttgcaacc gcaaatgcag acacattatg tataggttac catgcgaaca attcaacaga 121 cactgtagac acagtactag aaaagaatgt aacagtaaca cactctgtta atcttctaga 181 agacaagcat aacgggaaac tatgcaaact aagaggggta gccccattgc atttgggtaa 241 atgtaacatt gctggctgga tcctgggaaa tccagagtgt gaatcactct ccacagcaag 301 ctcatggtcc tacattgtgg aaacatctag ttcagacaat ggaacgtgtt acccaggaga 361 tttcatcgat tatgaggagc taagagagca attaagctca gtgtcatcat ttgaaaggtt 421 tgagatattc cccaagacaa gttcatggcc caatcatgac tcgaacaaag gtgtaacggc 481 agcatgtcct catgctggag caaaaggctt ctacaaaaat ttaatatggc tagttaaaaa 541 aggaaattca tacccaaagc tcagcaaatc ctacattaat gataaaggga aagaagtcct 601 cgtgctatgg ggcattcacc atccatctac tactgctgac caacaaagtc tctatcagaa 661 tgcagataca tatgtttttg tggggacatc aagatacagc aagaagttca agccggaaat 721 agcaataaga cccaaagtga gggatcaaga agggagaatg aactattact ggacactagt 781 agagccggga gacaaaataa cattcgaagc aactggaaat ctagtggtac cgagatatgc 841 attcgcaatg gaaagaaatg ctggatctgg tattatcatt tcagatacac cagtccacga 901 ttgcaataca acttgtcaga caccaaaggg tgctataaac accagcctcc catttcagaa 961 tatacatccg atcacaattg gaaaatgtcc aaaatatgta aaaagcacaa aattgagact 1021 ggccacagga ttgaggaatg tcccgtctat tcaatctaga ggcctatttg gggccattgc 1081 cggtttcatt gaaggggggt ggacagggat ggtagatgga tggtacggtt atcaccatca 1141 aaatgagcag gggtcaggat atgcagccga cctgaagagc acacagaatg ccattgacga 1201 gattactaac aaagtaaatt ctgttattga aaagatgaat acgcagttca cagcagtagg 1261 taaagagttc aaccacctgg aaaaaagaat agagaattta aataaaaaag ttgatgatgg 1321 tttcctggac atttggactt acaatgccga actgttggtt ctattggaaa atgaaagaac 1381 tttggactac cacgattcaa atgtgaagaa cttatatgaa aaggtaagaa accagttaaa 1441 aaacaatgcc aaggaaattg gaaatggctg ctttgaattt taccacaaat gcgataacac 1501 gtgcatggaa agtgtcaaaa atgggactta tgactaccca aaatactcag aggaagcaaa 1561 attaaacaga gaagaaatag atggggtaaa gctggaatca acaaggattt accagatttt 1621 ggcgatctat tcaactgtcg ccagttcatt ggtactggta gtctccctgg gggcaatcag 1681 tttttggatg tgctctaatg ggtctctaca gtgtagaata tgtatttaac attaggattt 1741 cagaagcatg agaaaaacac ccttgtttct act
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