niman wrote:
Sequences for all 8 gene segments has been released at Genbank. The NA sequence has a large number of non-synonymous changes - N43S, V61L, L126S, V240I, E267G, N368K, T437A, T465I.
LOCUS CY080574 1410 bp cRNA linear VRL 21-JAN-2011
DEFINITION Influenza A virus (A/Ulaanbaatar/190/2011(H1N1)) neuraminidase (NA)
gene, complete cds.
ACCESSION CY080574
VERSION CY080574.1 GI:319918322
DBLINK Project: 37813
KEYWORDS .
SOURCE Influenza A virus (A/Ulaanbaatar/190/2011(H1N1))
ORGANISM Influenza A virus (A/Ulaanbaatar/190/2011(H1N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 1410)
AUTHORS Nymadawa,P., Naranzul,T., Maitsetse,C., Enkhsaikhan,D. and
Darmaa,B.
TITLE H1N1pdm virus circulating in Mongolia in 2011
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1410)
AUTHORS Nymadawa,P., Naranzul,T., Maitsetse,C., Enkhsaikhan,D. and
Darmaa,B.
TITLE Direct Submission
JOURNAL Submitted (21-JAN-2011) Virology laboratory, National Center of
Communicable Diseases, Nam Yan Ju street, Ulaanbaatar 976, Mongolia
FEATURES Location/Qualifiers
source 1..1410
/organism="Influenza A virus
(A/Ulaanbaatar/190/2011(H1N1))"
/mol_type="viral cRNA"
/strain="A/Ulaanbaatar/190/2011"
/serotype="H1N1"
/isolation_source="Nasal Swab"
/host="human; gender M; age 1"
/db_xref="taxon:946564"
/segment="6"
/country="Mongolia: Ulaanbaatar/Khan-Uul"
/collection_date="11-Jan-2011"
gene 1..1410
/gene="NA"
CDS 1..1410
/gene="NA"
/codon_start=1
/product="neuraminidase"
/protein_id="ADV78132.1"
/db_xref="GI:319918323"
/translation="MNPNQKIITIGSVCMTIGMANLILQIGNIISIWISHSIQLGNQS
QIETCNQSVITYENNTWLNQTYVNISNTNFAAGQSVVSVKLAGNSSLCPVSGWAIYSK
DNSIRIGSKGDVFVIREPFISCSPSECRTFFLTQGALLNDKHSNGTIKDRSPYRTLMS
CPIGEVPSPYNSRFESVAWSASACHDGINWLTIGISGPDNGAVAVLKYNGIITDTIKS
WRNNILRTQESECACVNGSCFTIMTDGPSDGQASYKIFRIEKGKIVKSVGMNAPNYHY
EECSCYPDSSEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGIFGDNPRPNDKTGS
CGPVSSNGANGVKGFSFKYGNGVWIGRTKSISSRKGFEMIWDPNGWTGTDNNFSIKQD
IVGINEWSGYSGSFVQHPELTGLDCIRPCFWVELIRGRPKENTIWASGSSISFCGVNS
DTVGWSWPDGAELPFIIDK"
ORIGIN
1 atgaatccaa accaaaagat aataaccatt ggttcggtct gtatgacaat tggaatggct
61 aacttaatat tacaaattgg aaacataatc tcaatatgga ttagccactc aattcaactt
121 gggaatcaaa gtcagattga aacatgcaat caaagcgtca ttacttatga aaacaacact
181 tggttaaatc agacatatgt taacatcagc aacaccaact ttgctgctgg acagtcagtg
241 gtttccgtga aattagcggg caattcctct ctctgccctg ttagtggatg ggctatatac
301 agtaaagaca acagtataag aatcggttcc aagggggatg tgtttgtcat aagggaacca
361 ttcatatcat gctccccctc ggaatgcaga accttcttct tgactcaagg ggccttacta
421 aatgacaaac attccaatgg aaccattaaa gacaggagcc catatcgaac cctaatgagc
481 tgtcctattg gtgaagttcc ctctccatac aactcaagat ttgagtcagt cgcttggtca
541 gcaagtgctt gtcatgatgg catcaattgg ctaacaattg gaatttctgg cccagacaat
601 ggggcagtgg ctgtgttaaa gtacaacggc ataataacag acactatcaa gagttggaga
661 aacaatatat tgagaacaca agaatctgaa tgtgcatgtg taaatggttc ttgctttacc
721 ataatgaccg atggaccaag tgatggacag gcctcataca agatcttcag aatagaaaag
781 ggaaagatag tcaaatcagt cggaatgaat gcccctaatt atcactatga ggaatgctcc
841 tgttatcctg attctagtga aatcacatgt gtgtgcaggg ataactggca tggctcgaat
901 cgaccgtggg tgtctttcaa ccagaatctg gaatatcaga taggatacat atgcagtggg
961 attttcggag acaatccacg ccctaatgat aagacaggca gttgtggtcc agtatcgtct
1021 aatggagcaa atggagtaaa aggattttca ttcaaatacg gcaatggtgt ttggataggg
1081 agaactaaaa gcattagttc aagaaaaggt tttgagatga tttgggatcc aaacggatgg
1141 actgggacag acaataactt ctcaataaag caagatatcg taggaataaa tgagtggtca
1201 ggatatagcg ggagttttgt tcagcatcca gaactaacag ggctggattg tataagacct
1261 tgcttctggg ttgaactaat cagagggcga cccaaagaga acacaatctg ggctagcggg
1321 agcagcatat ccttttgtgg tgtaaacagt gacactgtgg gttggtcttg gccagacggt
1381 gctgagttgc catttatcat tgacaagtaa