Rhiza Labs FluTracker Forum

Latest sequence, A/Tver/IIV2969/2009, at Genbank is from Russia near Moscow. Source is Nov 14 autopsy lung tissue from 26F.

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LOCUS GU451254 1744 bp cRNA linear VRL 13-JAN-2010
DEFINITION Influenza A virus (A/Tver/IIV2969/2009(H1N1)) segment 4
hemagglutinin (HA) gene, complete cds.
ACCESSION GU451254
VERSION GU451254.1 GI:283831904
DBLINK Project:37813
KEYWORDS .
SOURCE Influenza A virus (A/Tver/IIV2969/2009(H1N1))
ORGANISM Influenza A virus (A/Tver/IIV2969/2009(H1N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 1744)
AUTHORS Zhuravleva,M.M. and Prilipov,A.G.
TITLE Direct Submission
JOURNAL Submitted (13-JAN-2010) Molecular Genetics, Ivanovsky Virology
Institute, Gamalei, 16, Moscow 123098, Russia
COMMENT GenBank Accession Numbers GU451253-GU451260 represent sequences
from the 8 segments of Influenza A virus
(A/Tver/IIV2969/2009(H1N1)).

Swine influenza A (H1N1) virus isolated during human swine flu
outbreak of 2009.
FEATURES Location/Qualifiers
source 1..1744
/organism="Influenza A virus (A/Tver/IIV2969/2009(H1N1))"
/mol_type="viral cRNA"
/strain="A/Tver/IIV2969/2009"
/serotype="H1N1"
/isolation_source="autopsy material; lung whole
cell-tissue lysate"
/host="Homo sapiens; female; age 26"
/db_xref="taxon:708162"
/segment="4"
/country="Russia"
/collection_date="14-Nov-2009"
/note="lineage: swl"
gene 19..1719
/gene="HA"
CDS 19..1719
/gene="HA"
/note="receptor binding and fusion protein"
/codon_start=1
/product="hemagglutinin"
/protein_id="ADB44385.1"
/db_xref="GI:283831905"
/translation="MKAILVVLLYTFATANADTLCIGYHANNSTDTVDTVLEKNVTVT
HSVNLLEDKHNGKLCKLRGVAPLHLGKCNIAGWILGNPECESLSTASSWSYIVETSSS
DNGTCYPGDFIDYEELREQLSSVSSFERFEIFPKTSSWPNHDSNKGVTAACPHAGAKS
FYKNLIWLVKKGNSYPKLSKSYINDKGKEVLVLWGIHHPSTSADQQSLYQNADAYVFV
GTSRYSKKFKPEIAIRPKVRGQEGRMNYYWTLVEPGDKITFEATGNLVVPRYAFAMER
NAGSGIIISDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKCPKYVKSTKLRLATG
LRNVPSIQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDEI
TNKVNSVIEKMNTQFTAVGKEFNHLEKRIENLNKKVDDGFLDIWTYNAELLVLLENER
TLDYHDSNVKNLYEKVRSQLKNNAKEIGNGCFEFYHKCDNTCMESVKNGTYDYPKYSE
EAKLNREEIDGVKLESTRIYQILAIYSTVASSLVLVVSLGAISFWMCSNGSLQCRICI"
ORIGIN
1 aaaacaaaag caacaaaaat gaaggcaata ctagtagttc tgctatatac atttgcaacc
61 gcaaatgcag acacattatg tataggttat catgcgaaca attcaacaga cactgtagac
121 acagtactag aaaagaatgt aacagtaaca cactctgtta accttctaga agacaagcat
181 aacgggaaac tatgcaaact aagaggggta gccccattgc atttgggtaa atgtaacatt
241 gctggctgga tcctggggaa tccagagtgt gaatcactct ccacagcaag ctcatggtcc
301 tacattgtgg aaacatctag ttcagacaat ggaacgtgtt acccaggaga tttcatcgat
361 tatgaggagc taagagagca attgagctca gtgtcatcat ttgaaaggtt tgagatattc
421 cccaagacaa gttcatggcc caatcatgac tcgaacaaag gtgtaacggc agcatgtcct
481 catgctggag caaaaagctt ctacaaaaat ttaatatggc tagttaaaaa aggaaattca
541 tacccaaagc tcagcaaatc ctacattaat gataaaggga aagaagtcct cgtgctatgg
601 ggcattcacc atccatctac tagtgctgac caacaaagtc tctatcagaa tgcagatgca
661 tatgtttttg tggggacatc aagatacagc aagaagttca agccggaaat agcaataaga
721 cccaaagtga ggggtcaaga agggagaatg aactattact ggacactagt agagccggga
781 gacaaaataa cattcgaagc aactggaaat ctagtggtac cgagatatgc attcgcaatg
841 gaaagaaatg ctggatctgg tattatcatt tcagatacac cagtccacga ttgcaataca
901 acttgtcaga cacccaaggg tgctataaac accagcctcc catttcagaa tatacatccg
961 atcacaattg gaaaatgtcc aaaatatgta aaaagcacaa aattgagact ggccacagga
1021 ttgaggaatg tcccgtctat tcaatctaga ggcctatttg gggccattgc cggtttcatt
1081 gaaggggggt ggacagggat ggtagatgga tggtacggtt atcaccatca aaatgagcag
1141 gggtcaggat atgcagccga cctgaagagc acacagaatg ccattgacga gattactaac
1201 aaagtaaatt ctgttattga aaagatgaat acacagttca cagcagtagg taaagagttc
1261 aaccacctgg aaaaaagaat agagaattta aataaaaagg ttgatgatgg tttcctggac
1321 atttggactt acaatgccga actgttggtt ctattggaaa atgaaagaac tttggactac
1381 cacgattcaa atgtgaagaa cttatatgaa aaggtaagaa gccagttaaa aaacaatgcc
1441 aaggaaattg gaaacggctg ctttgaattt taccacaaat gcgataacac gtgcatggaa
1501 agtgtcaaaa atgggactta tgactaccca aaatactcag aggaagcaaa attaaacaga
1561 gaagaaatag atggggtaaa gctggaatca acaaggattt accagatttt ggcgatctat
1621 tcaactgtcg ccagttcatt ggtactggta gtctccctgg gggcaatcag tttctggatg
1681 tgctctaatg ggtctctaca gtgtagaata tgtatttaac attaggattt cagaagcatg
1741 agaa

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Clade is the same as Ukraine (and Denmark, etc).

gb|CY054280.1| Influenza A virus (A/Rio de Janeiro/5826/2009(... 36.2 0.77
gb|GU369674.1| Influenza A virus (A/Ankara/30/2009(H1N1)) seg... 36.2 0.77
gb|GU369671.1| Influenza A virus (A/Ankara/27/2009(H1N1)) seg... 36.2 0.77
gb|GU369655.1| Influenza A virus (A/Ankara/11/2009(H1N1)) seg... 36.2 0.77
gb|GU369654.1| Influenza A virus (A/Ankara/10/2009(H1N1)) seg... 36.2 0.77
gb|GU369653.1| Influenza A virus (A/Ankara/09/2009(H1N1)) seg... 36.2 0.77
gb|GU371263.1| Influenza A virus (A/Bryansk/IIV2971/2009(H1N1... 36.2 0.77
gb|GU371256.1| Influenza A virus (A/Orenburg/IIV2974/2009(H1N... 36.2 0.77
gb|GU367327.1| Influenza A virus (A/Salekhard/01/2009(H1N1)) ... 36.2 0.77
gb|CY053744.1| Influenza A virus (A/Russia/190/2009(H1N1)) se... 36.2 0.77
gb|CY053736.1| Influenza A virus (A/Russia/178/2009(H1N1)) se... 36.2 0.77
gb|CY053728.1| Influenza A virus (A/Russia/74/2009(H1N1)) seg... 36.2 0.77
dbj|AB539048.1| Influenza A virus (A/Nagasaki/NU-3/2009(H1N1)... 36.2 0.77
dbj|AB539047.1| Influenza A virus (A/Nagasaki/HA-49/2009(H1N1... 36.2 0.77
gb|CY053689.1| Influenza A virus (A/Russia/191/2009(H1N1)) se... 36.2 0.77
gb|CY053681.1| Influenza A virus (A/Russia/14/2009(H1N1)) seg... 36.2 0.77
gb|GU338362.1| Influenza A virus (A/Landstuhl/5950/2009(H1N1)... 36.2 0.77
gb|CY053627.1| Influenza A virus (A/Russia/165/2009(H1N1)) se... 36.2 0.77
gb|CY053416.1| Influenza A virus (A/Russia/19/2009(H1N1)) seg... 36.2 0.77
gb|CY053373.1| Influenza A virus (A/Catalonia/S1935/2009(H1N1... 36.2 0.77
gb|CY052266.1| Influenza A virus (A/Texas/42102708/2009(H1N1)... 36.2 0.77
gb|CY052146.1| Influenza A virus (A/New York/4398/2009(H1N1))... 36.2 0.77
gb|CY052943.1| Influenza A virus (A/Texas/45122886/2009(H1N1)... 36.2 0.77
gb|CY052839.1| Influenza A virus (A/Texas/45132202/2009(H1N1)... 36.2 0.77
gb|CY052823.1| Influenza A virus (A/Texas/45072128/2009(H1N1)... 36.2 0.77
gb|CY052743.1| Influenza A virus (A/Texas/45101424/2009(H1N1)... 36.2 0.77
gb|CY052695.1| Influenza A virus (A/Texas/45083819/2009(H1N1)... 36.2 0.77
gb|CY052615.1| Influenza A virus (A/Texas/44302533/2009(H1N1)... 36.2 0.77
gb|CY052551.1| Influenza A virus (A/Texas/45122774/2009(H1N1)... 36.2 0.77
gb|CY052503.1| Influenza A virus (A/Texas/45104026/2009(H1N1)... 36.2 0.77
gb|CY052366.1| Influenza A virus (A/Zavkhan/8299/2009(H1N1)) ... 36.2 0.77
dbj|AB536770.1| Influenza A virus (A/Nagasaki/HA-62/2009(H1N1... 36.2 0.77
dbj|AB536769.1| Influenza A virus (A/Nagasaki/HA-58/2009(H1N1... 36.2 0.77
dbj|AB535747.1| Influenza A virus (A/Nagasaki/HA-60/2009(H1N1... 36.2 0.77
dbj|AB535743.1| Influenza A virus (A/Nagasaki/HA-50/2009(H1N1... 36.2 0.77
dbj|AB535742.1| Influenza A virus (A/Nagasaki/HA-48/2009(H1N1... 36.2 0.77
dbj|AB535741.1| Influenza A virus (A/Nagasaki/NU-2/2009(H1N1)... 36.2 0.77
dbj|AB535740.1| Influenza A virus (A/Nagasaki/HA-37/2009(H1N1... 36.2 0.77
dbj|AB535739.1| Influenza A virus (A/Nagasaki/HA-30/2009(H1N1... 36.2 0.77
dbj|AB535738.1| Influenza A virus (A/Nagasaki/HA-24/2009(H1N1... 36.2 0.77
gb|CY052030.1| Influenza A virus (A/Catalonia/S1827/2009(H1N1... 36.2 0.77
gb|CY052026.1| Influenza A virus (A/Catalonia/NS7362/2009(H1N... 36.2 0.77
gb|CY052014.1| Influenza A virus (A/Norway/4021/2009(H1N1)) s... 36.2 0.77
gb|CY052013.1| Influenza A virus (A/Norway/4020/2009(H1N1)) s... 36.2 0.77
gb|CY052012.1| Influenza A virus (A/Norway/3855/2009(H1N1)) s... 36.2 0.77
gb|CY052006.1| Influenza A virus (A/Norway/3440/2009(H1N1)) s... 36.2 0.77
gb|CY052004.1| Influenza A virus (A/Norway/3371/2009(H1N1)) s... 36.2 0.77
gb|CY052003.1| Influenza A virus (A/Norway/3370/2009(H1N1)) s... 36.2 0.77
gb|CY051998.1| Influenza A virus (A/Norway/3364-2/2009(H1N1))... 36.2 0.77
gb|CY051994.1| Influenza A virus (A/Norway/3278/2009(H1N1)) s... 36.2 0.77
gb|CY051989.1| Influenza A virus (A/Norway/2924/2009(H1N1)) s... 36.2 0.77
gb|CY051982.1| Influenza A virus (A/Catalonia/S1761/2009(H1N1... 36.2 0.77
gb|CY051967.1| Influenza A virus (A/Catalonia/S1751/2009(H1N1... 36.2 0.77
gb|CY051964.1| Influenza A virus (A/Catalonia/S1748/2009(H1N1... 36.2 0.77
gb|CY051949.1| Influenza A virus (A/Catalonia/S1687/2009(H1N1... 36.2 0.77
gb|GU211235.1| Influenza A virus (A/Omsk/02/2009(H1N1)) segme... 36.2 0.77
gb|CY050846.1| Influenza A virus (A/Ulaanbaatar/6133/2009(H1N... 36.2 0.77
gb|CY050845.1| Influenza A virus (A/Ulaanbaatar/6266/2009(H1N... 36.2 0.77
gb|CY051807.1| Influenza A virus (A/New York/4870/2009(H1N1))... 36.2 0.77
gb|CY051783.1| Influenza A virus (A/New York/4844/2009(H1N1))... 36.2 0.77
gb|CY049963.1| Influenza A virus (A/Santo Domingo/WR1059N/200... 36.2 0.77
gb|CY049955.1| Influenza A virus (A/Santo Domingo/WR1058N/200... 36.2 0.77
gb|CY049947.1| Influenza A virus (A/Santo Domingo/WR1057N/200... 36.2 0.77
gb|CY049571.1| Influenza A virus (A/Singapore/ON1156/2009(H1N... 36.2 0.77
gb|CY049068.1| Influenza A virus (A/Singapore/ON129/2009(H1N1... 36.2 0.77
dbj|AB530489.1| Influenza A virus (A/Nagasaki/NU-1/2009(H1N1)... 36.2 0.77
dbj|AB530487.1| Influenza A virus (A/Nagasaki/HA-42/2009(H1N1... 36.2 0.77
dbj|AB530486.1| Influenza A virus (A/Nagasaki/HA-41/2009(H1N1... 36.2 0.77
dbj|AB530485.1| Influenza A virus (A/Nagasaki/HA-40/2009(H1N1... 36.2 0.77
dbj|AB530484.1| Influenza A virus (A/Nagasaki/HA-39/2009(H1N1... 36.2 0.77
dbj|AB530483.1| Influenza A virus (A/Nagasaki/HA-38/2009(H1N1... 36.2 0.77
dbj|AB530482.1| Influenza A virus (A/Nagasaki/HA-36/2009(H1N1... 36.2 0.77
dbj|AB530481.1| Influenza A virus (A/Nagasaki/HA-35/2009(H1N1... 36.2 0.77
dbj|AB530480.1| Influenza A virus (A/Nagasaki/HA-34/2009(H1N1... 36.2 0.77
dbj|AB530479.1| Influenza A virus (A/Nagasaki/HA-33/2009(H1N1... 36.2 0.77
dbj|AB530478.1| Influenza A virus (A/Nagasaki/HA-32/2009(H1N1... 36.2 0.77
dbj|AB530477.1| Influenza A virus (A/Nagasaki/HA-31/2009(H1N1... 36.2 0.77
dbj|AB530476.1| Influenza A virus (A/Nagasaki/HA-29/2009(H1N1... 36.2 0.77
dbj|AB530475.1| Influenza A virus (A/Nagasaki/HA-28/2009(H1N1... 36.2 0.77
dbj|AB530474.1| Influenza A virus (A/Nagasaki/HA-27/2009(H1N1... 36.2 0.77
dbj|AB530473.1| Influenza A virus (A/Nagasaki/HA-26/2009(H1N1... 36.2 0.77
dbj|AB530472.1| Influenza A virus (A/Nagasaki/HA-25/2009(H1N1... 36.2 0.77
dbj|AB530471.1| Influenza A virus (A/Nagasaki/HA-22/2009(H1N1... 36.2 0.77
dbj|AB530470.1| Influenza A virus (A/Nagasaki/HA-18/2009(H1N1... 36.2 0.77
dbj|AB530469.1| Influenza A virus (A/Nagasaki/HA-17/2009(H1N1... 36.2 0.77
dbj|AB530468.1| Influenza A virus (A/Nagasaki/HA-16/2009(H1N1... 36.2 0.77
dbj|AB530466.1| Influenza A virus (A/Nagasaki/HA-14/2009(H1N1... 36.2 0.77
dbj|AB530465.1| Influenza A virus (A/Nagasaki/HA-13/2009(H1N1... 36.2 0.77
dbj|AB530464.1| Influenza A virus (A/Nagasaki/HA-12/2009(H1N1... 36.2 0.77
dbj|AB530463.1| Influenza A virus (A/Nagasaki/HA-11/2009(H1N1... 36.2 0.77
dbj|AB530462.1| Influenza A virus (A/Nagasaki/HA-10/2009(H1N1... 36.2 0.77
gb|CY049713.1| Influenza A virus (A/Catalonia/S1501/2009(H1N1... 36.2 0.77
gb|CY049039.1| Influenza A virus (A/Catalonia/S1402/2009(H1N1... 36.2 0.77
gb|GU117765.1| Influenza A virus (A/Nagasaki/I01/2009(H1N1)) ... 36.2 0.77
gb|CY047275.1| Influenza A virus (A/Catalonia/S1268/2009(H1N1... 36.2 0.77
gb|CY047272.1| Influenza A virus (A/Catalonia/S1267/2009(H1N1... 36.2 0.77
gb|CY047179.1| Influenza A virus (A/Catalonia/S1181/2009(H1N1... 36.2 0.77
gb|CY047176.1| Influenza A virus (A/Catalonia/S1179/2009(H1N1... 36.2 0.77
gb|CY047161.1| Influenza A virus (A/Catalonia/S1162/2009(H1N1... 36.2 0.77
gb|CY047118.1| Influenza A virus (A/Catalonia/S1096/2009(H1N1... 36.2 0.77
gb|GU014750.1| Influenza A virus (A/Hiroshima/201/2009(H1N1))... 36.2 0.77
gb|GQ894911.1| Influenza A virus (A/Oregon/20/2009(H1N1)) seg... 36.2 0.77
gb|GQ894830.1| Influenza A virus (A/Rhode Island/08/2009(H1N1... 36.2 0.77
gb|CY046065.1| Influenza A virus (A/Italy/132/2009(H1N1)) seg... 36.2 0.77
gb|CY046062.1| Influenza A virus (A/Italy/129/2009(H1N1)) seg... 36.2 0.77
gb|GQ527165.1| Influenza A virus (A/Singapore/TLL51/2009(H1N1... 36.2 0.77
gb|CY044997.1| Influenza A virus (A/New York/3828/2009(H1N1))... 36.2 0.77
gb|GQ484355.1| Influenza A virus (A/swine/Kansas/77778/2007(H... 36.2 0.77
gb|CY044080.1| Influenza A virus (A/New York/3715/2009(H1N1))... 36.2 0.77
gb|CY044072.1| Influenza A virus (A/New York/3702/2009(H1N1))... 36.2 0.77
gb|CY042320.1| Influenza A virus (A/swine/Illinois/Sg-00445/2... 36.2 0.77
gb|CY042316.1| Influenza A virus (A/swine/Illinois/Sg-00444/2... 36.2 0.77
gb|CY042312.1| Influenza A virus (A/swine/Illinois/Sg-00443/2... 36.2 0.77
gb|GQ414768.1| Influenza A virus (A/Sao Paulo/43812/2009(H1N1... 36.2 0.77
gb|GQ377095.1| Influenza A virus (A/California/24/2009(H1N1))... 36.2 0.77
gb|GQ359765.1| Influenza A virus (A/Stockholm/31/2009(H1N1)) ... 36.2 0.77
gb|GQ292961.1| Influenza A virus (A/Mexico City/22/2009(H1N1)... 36.2 0.77
gb|GQ229373.1| Influenza A virus (A/swine/Hong Kong/1110/2006... 36.2 0.77
gb|GQ229365.1| Influenza A virus (A/swine/Hong Kong/NS623/200... 36.2 0.77
gb|GQ229333.1| Influenza A virus (A/swine/Hong Kong/1562/2005... 36.2 0.77
gb|GQ229269.1| Influenza A virus (A/swine/Hong Kong/915/2004(... 36.2 0.77
gb|GQ232085.1| Influenza A virus (A/Guangdong/02/2009(H1N1)) ... 36.2 0.77
gb|GQ223435.1| Influenza A virus (A/Guangdong/05/2009(H1N1)) ... 36.2 0.77
gb|CY040603.1| Influenza A virus (A/swine/North Carolina/4871... 36.2 0.77
gb|CY040602.1| Influenza A virus (A/swine/North Carolina/4775... 36.2 0.77
gb|CY040601.1| Influenza A virus (A/swine/North Carolina/4509... 36.2 0.77
gb|CY040600.1| Influenza A virus (A/swine/North Carolina/4488... 36.2 0.77
gb|CY040599.1| Influenza A virus (A/swine/North Carolina/4427... 36.2 0.77
gb|CY040595.1| Influenza A virus (A/swine/North Carolina/9856... 36.2 0.77
gb|CY040594.1| Influenza A virus (A/swine/North Carolina/4511... 36.2 0.77
gb|CY040593.1| Influenza A virus (A/swine/North Carolina/4488... 36.2 0.77
gb|CY040592.1| Influenza A virus (A/swine/North Carolina/4452... 36.2 0.77
gb|CY040591.1| Influenza A virus (A/swine/North Carolina/4350... 36.2 0.77
gb|CY040586.1| Influenza A virus (A/swine/North Carolina/1286... 36.2 0.77
gb|CY040578.1| Influenza A virus (A/swine/North Carolina/4257... 36.2 0.77
gb|CY040576.1| Influenza A virus (A/swine/North Carolina/3876... 36.2 0.77
gb|CY040573.1| Influenza A virus (A/swine/North Carolina/2629... 36.2 0.77
gb|CY040571.1| Influenza A virus (A/swine/North Carolina/1286... 36.2 0.77
gb|CY040569.1| Influenza A virus (A/swine/North Carolina/3456... 36.2 0.77
gb|CY040565.1| Influenza A virus (A/swine/North Carolina/4613... 36.2 0.77
gb|CY040563.1| Influenza A virus (A/swine/North Carolina/4390... 36.2 0.77
gb|CY040561.1| Influenza A virus (A/swine/North Carolina/2812... 36.2 0.77
gb|CY040557.1| Influenza A virus (A/swine/North Carolina/4743... 36.2 0.77
gb|CY040555.1| Influenza A virus (A/swine/North Carolina/4685... 36.2 0.77
gb|CY040551.1| Influenza A virus (A/swine/North Carolina/4401... 36.2 0.77
gb|CY040547.1| Influenza A virus (A/swine/North Carolina/4311... 36.2 0.77
gb|CY040543.1| Influenza A virus (A/swine/North Carolina/7386... 36.2 0.77
gb|GQ132144.1| Influenza A virus (A/Canada-ON/RV1529/2009(H1N... 36.2 0.77
gb|CY039909.1| Influenza A Virus (A/Maryland/12/1991(H1N1)) s... 36.2 0.77
gb|FJ986621.1| Influenza A virus (A/Ohio/02/2007(H1N1)) segme... 36.2 0.77
gb|FJ986620.1| Influenza A virus (A/Ohio/01/2007(H1N1)) segme... 36.2 0.77
gb|EU604689.1| Influenza A virus (A/swine/OH/511445/2007(H1N1... 36.2 0.77
gb|EU798788.1| Influenza A virus (A/swine/Korea/CY08/2007(H1N... 36.2 0.77
gb|EU798787.1| Influenza A virus (A/swine/Korea/PZ14/2006(H1N... 36.2 0.77
gb|EU798786.1| Influenza A virus (A/swine/Korea/PZ7/2006(H1N2... 36.2 0.77
gb|EU798785.1| Influenza A virus (A/swine/Korea/PZ4/2006(H1N2... 36.2 0.77
gb|EU798784.1| Influenza A virus (A/swine/Korea/Asan04/2006(H... 36.2 0.77
gb|EU798783.1| Influenza A virus (A/swine/Korea/JL04/2005(H1N... 36.2 0.77
gb|EU798782.1| Influenza A virus (A/swine/Korea/JL02/2005(H1N... 36.2 0.77
gb|EU798781.1| Influenza A virus (A/swine/Korea/JL01/2005(H1N... 36.2 0.77
gb|EU798780.1| Influenza A virus (A/swine/Korea/Hongsong2/200... 36.2 0.77
gb|EU409960.1| Influenza A virus (A/swine/Ohio/C62006/06(H1N1... 36.2 0.77
gb|EU409955.1| Influenza A virus (A/swine/Ohio/75004/04(H1N1)... 36.2 0.77
gb|EU409948.1| Influenza A virus (A/swine/Ohio/24366/07(H1N1)... 36.2 0.77
gb|EU139830.1| Influenza A virus (A/swine/Minnesota/00194/200... 36.2 0.77
gb|EU139828.1| Influenza A virus (A/swine/Minnesota/1192/2001... 36.2 0.77
gb|DQ666933.1| Influenza A virus (A/swine/Korea/S11/2005(H1N2... 36.2 0.77
gb|EF556201.1| Influenza A virus (A/swine/Guangxi/17/2005(H1N... 36.2 0.77
gb|EF556199.1| Influenza A virus (A/swine/Guangxi/13/2006(H1N... 36.2 0.77
gb|AY060050.1| Influenza A virus (A/SW/MN/16419/01(H1N2)) hem... 36.2 0.77
gb|AY060048.1| Influenza A virus (A/SW/MN/23124-S/01(H1N2)) h... 36.2 0.77
gb|AY060047.1| Influenza A virus (A/SW/MN/23124-T/01(H1N2)) h... 36.2 0.77
gb|AY060045.1| Influenza A virus (A/SW/OH/7802/00(H1N2)) hema... 36.2 0.77
gb|AY060044.1| Influenza A virus (A/SW/NE/18339/01(H1N2)) hem... 36.2 0.77
gb|AY060039.1| Influenza A virus (A/SW/IN/14810-S/01(H1N2)) h... 36.2 0.77
gb|AY060038.1| Influenza A virus (A/SW/IN/14810-T/01(H1N2)) h... 36.2 0.77
gb|AY060034.1| Influenza A virus (A/SW/KS/13481-S/00(H1N2)) h... 36.2 0.77
gb|AY060033.1| Influenza A virus (A/SW/KS/13481-T/00(H1N2)) h... 36.2 0.77
gb|AY060032.1| Influenza A virus (A/SW/MN/13130/00(H1N2)) hem... 36.2 0.77
gb|AY060031.1| Influenza A virus (A/SW/MN/12883/00(H1N2)) hem... 36.2 0.77
gb|AY060030.1| Influenza A virus (A/SW/AR/12491/00(H1N2)) hem... 36.2 0.77
gb|AY038014.1| Influenza A virus (A/Turkey/MO/24093/99(H1N2))... 36.2 0.77
gb|AF455682.1| Influenza A virus (A/Swine/Illinois/100084/01 ... 36.2 0.77
gb|AF455681.1| Influenza A virus (A/Swine/Illinois/100085A/01... 36.2 0.77
gb|AF455680.1| Influenza A virus (A/Swine/Indiana/P12439/00 (... 36.2 0.77
gb|AF455677.1| Influenza A virus (A/Swine/North Carolina/9352... 36.2 0.77
gb|AF455675.1| Influenza A virus (A/Swine/Ohio/891/01(H1N2)) ... 36.2 0.77
gb|CY005735.1| Influenza A virus (A/duck/NZL/160/1976(H1N3)) ... 36.2 0.77
gb|AF250124.1|AF250124 Influenza A virus (A/Swine/Indiana/9K0... 36.2 0.77
gb|L24362.1|FLAMD1291A Influenza A virus (A/MD/12/1991(H1N1))... 36.2 0.77

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www.twitter.com/hniman

The time between death, and release of sequences and analysis, in this case 2 months, concerns me. We are seeing what happened 2 months ago...what will we be seeing 2 months from now?

mutations for this:
A240G(4),A716G(4),A1281G(4)
plus Cancun: T658A,C1408T

Russia markers (non-Cancun):
G426A(1),A1020T(1),C2137T(1)
A1281G(4)
T1221C(6)
G333A(7),G414A(7),G555A(7)
A252G(8)

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no patents on genes, publish the GISAID sequences !

Actually, this is a quick release. Most sequences being released at this time are from September and October. The CDC has acknowledged 50 isolates with H274Y, but the number of public US sequences is less than 10.

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www.twitter.com/hniman