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 Post subject: H274Y and D225G in Illinois
PostPosted: Sun Dec 13, 2009 12:09 pm 
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Location: Pittsburgh, PA USA
An HA sequence, A/Illinois/11/2009, deposited at GISAID by the CDC has D22G and the NA sequence has H274Y.

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 Post subject: Re: H274Y and D225G in Illinois
PostPosted: Sun Dec 13, 2009 12:25 pm 
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Did it have a collection date?


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 Post subject: Re: H274Y and D225G in Illinois
PostPosted: Sun Dec 13, 2009 12:26 pm 
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Tex wrote:
Did it have a collection date?

July 31, 55M
I could not find a corresponding reported death.

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 Post subject: Re: H274Y and D225G in Illinois
PostPosted: Sun Dec 13, 2009 12:32 pm 
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Were there any other sequences from Illinois with H274Y around that same time period?


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 Post subject: Re: H274Y and D225G in Illinois
PostPosted: Sun Dec 13, 2009 12:37 pm 
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Location: Pittsburgh, PA USA
MKey1 wrote:
Were there any other sequences from Illinois with H274Y around that same time period?

Here is NA travel log

gb|GU211221.1| Influenza A virus (A/Vladivostok/01/2009(H1N1)... 38.2 0.19
gb|CY051649.1| Influenza A virus (A/New York/4691/2009(H1N1))... 38.2 0.19
gb|CY051225.1| Influenza A virus (A/Wisconsin/629-D00022/2009... 38.2 0.19
gb|CY051185.1| Influenza A virus (A/Wisconsin/629-D02220/2009... 38.2 0.19
gb|CY051089.1| Influenza A virus (A/Wisconsin/629-D01844/2009... 38.2 0.19
gb|CY051009.1| Influenza A virus (A/Wisconsin/629-D01619/2009... 38.2 0.19
gb|CY049701.1| Influenza A virus (A/Singapore/GP2715/2009(H1N... 38.2 0.19
gb|GU123916.1| Influenza A virus (A/Italy/149/2009(H1N1)) seg... 38.2 0.19
gb|CY047189.1| Influenza A virus (A/Catalonia/S1187/2009(H1N1... 38.2 0.19
gb|CY046821.1| Influenza A virus (A/Wisconsin/629-D02013/2009... 38.2 0.19
gb|CY046541.1| Influenza A virus (A/Wisconsin/629-D01313/2009... 38.2 0.19
gb|GQ894921.1| Influenza A virus (A/Texas/47/2009(H1N1)) segm... 38.2 0.19
gb|GQ496148.1| Influenza A virus (A/Vladivostok/IIV18/2009(H1... 38.2 0.19
gb|GQ496143.1| Influenza A virus (A/Vladivostok/IIV17/2009(H1... 38.2 0.19
gb|GQ455034.1| Influenza A virus (A/Nanjing/2/2009(H1N1)) seg... 38.2 0.19
gb|GQ359760.1| Influenza A virus (A/Zhejiang/DTID-ZJU01/2009(... 38.2 0.19
gb|GQ338418.1| Influenza A virus (A/Indiana/12/2009(H1N1)) se... 38.2 0.19
gb|GQ338401.1| Influenza A virus (A/Pennsylvania/10/2009(H1N1... 38.2 0.19
gb|GQ323529.1| Influenza A virus (A/Illinois/04/2009(H1N1)) s... 38.2 0.19
gb|GQ323493.1| Influenza A virus (A/Arkansas/03/2009(H1N1)) s... 38.2 0.19
gb|GQ243754.1| Influenza A virus (A/Philippines/2001/2009(H1N... 38.2 0.19
gb|GQ166224.1| Influenza A virus (A/Sichuan/1/2009(H1N1)) seg... 38.2 0.19

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 Post subject: Re: H274Y and D225G in Illinois
PostPosted: Sun Dec 13, 2009 12:38 pm 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 6528
Location: Pittsburgh, PA USA
niman wrote:
MKey1 wrote:
Were there any other sequences from Illinois with H274Y around that same time period?

Here is NA travel log

gb|GU211221.1| Influenza A virus (A/Vladivostok/01/2009(H1N1)... 38.2 0.19
gb|CY051649.1| Influenza A virus (A/New York/4691/2009(H1N1))... 38.2 0.19
gb|CY051225.1| Influenza A virus (A/Wisconsin/629-D00022/2009... 38.2 0.19
gb|CY051185.1| Influenza A virus (A/Wisconsin/629-D02220/2009... 38.2 0.19
gb|CY051089.1| Influenza A virus (A/Wisconsin/629-D01844/2009... 38.2 0.19
gb|CY051009.1| Influenza A virus (A/Wisconsin/629-D01619/2009... 38.2 0.19
gb|CY049701.1| Influenza A virus (A/Singapore/GP2715/2009(H1N... 38.2 0.19
gb|GU123916.1| Influenza A virus (A/Italy/149/2009(H1N1)) seg... 38.2 0.19
gb|CY047189.1| Influenza A virus (A/Catalonia/S1187/2009(H1N1... 38.2 0.19
gb|CY046821.1| Influenza A virus (A/Wisconsin/629-D02013/2009... 38.2 0.19
gb|CY046541.1| Influenza A virus (A/Wisconsin/629-D01313/2009... 38.2 0.19
gb|GQ894921.1| Influenza A virus (A/Texas/47/2009(H1N1)) segm... 38.2 0.19
gb|GQ496148.1| Influenza A virus (A/Vladivostok/IIV18/2009(H1... 38.2 0.19
gb|GQ496143.1| Influenza A virus (A/Vladivostok/IIV17/2009(H1... 38.2 0.19
gb|GQ455034.1| Influenza A virus (A/Nanjing/2/2009(H1N1)) seg... 38.2 0.19
gb|GQ359760.1| Influenza A virus (A/Zhejiang/DTID-ZJU01/2009(... 38.2 0.19
gb|GQ338418.1| Influenza A virus (A/Indiana/12/2009(H1N1)) se... 38.2 0.19
gb|GQ338401.1| Influenza A virus (A/Pennsylvania/10/2009(H1N1... 38.2 0.19
gb|GQ323529.1| Influenza A virus (A/Illinois/04/2009(H1N1)) s... 38.2 0.19
gb|GQ323493.1| Influenza A virus (A/Arkansas/03/2009(H1N1)) s... 38.2 0.19
gb|GQ243754.1| Influenza A virus (A/Philippines/2001/2009(H1N... 38.2 0.19
gb|GQ166224.1| Influenza A virus (A/Sichuan/1/2009(H1N1)) seg... 38.2 0.19

Texas/47 has H274Y

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 Post subject: Re: H274Y and D225G in Illinois
PostPosted: Sun Dec 13, 2009 1:25 pm 
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I should have looked that up myself, but thanks for doing my homework for me. I thought you'd know. Appreciated. :hello:


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 Post subject: Re: H274Y and D225G in Illinois
PostPosted: Sun Dec 13, 2009 2:31 pm 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 6528
Location: Pittsburgh, PA USA
Commentary

http://www.recombinomics.com/News/12130 ... 4Y_IL.html

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 Post subject: Re: H274Y and D225G in Illinois
PostPosted: Sun Dec 13, 2009 2:59 pm 
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Joined: Sat Oct 31, 2009 4:00 pm
Posts: 16
niman wrote:



It's also of interest that this new case occured in the same week as the recent fatal Utah case that also showed the D225g present. At that time 10% of fatal cases were coming from Utah. Was there a similar spike in cases in Illinois at the same time?


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 Post subject: Re: H274Y and D225G in Illinois
PostPosted: Sun Dec 13, 2009 3:51 pm 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 6528
Location: Pittsburgh, PA USA
Combination is generating interest

http://www.newsnow.co.uk/h/Hot+Topics/F ... lu?type=ts

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