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PostPosted: Tue Dec 30, 2014 5:46 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI553466 A/Hong Kong/8194273/2014 (A/H7N9) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%)
EPI537479 A/chicken/B15/Jiangxi/2014 (A/H10N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%)
EPI537468 A/chicken/77/Jiangxi/2014 (A/H10N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%)
EPI530533 A/Jiangxi-Donghu/346-2/2013(H10N8) (A/H10N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%)
EPI530525 A/Jiangxi-Donghu/346-1/2013 (A/H10N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%)
EPI497482 A/Jiangxi-Donghu/346/2013 (A/H10N8) segment 3 (PA) 3856.9 0.000000e+00 2130/2151 (99%)
EPI530539 A/chicken/Jiangxi/102/2013(H10N8) (A/H10N8) segment 3 (PA) 3851.4 0.000000e+00 2129/2151 (98%)
EPI529225 A/chicken/Shanghai/C/2011 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%)
EPI466406 A/chicken/Jiangsu/MYJMF/2012 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%)
EPI466382 A/chicken/Jiangsu/CZYWP/2012 (A/H9N2) segment 3 (PA) 3773.8 0.000000e+00 2115/2151 (98%)
EPI466270 A/chicken/Jiangsu/WJHRG/2012 (A/H9N2) segment 3 (PA) 3768.3 0.000000e+00 2114/2151 (98%)
EPI457673 A/environment/Shanghai/S1436/2013 (A/H7N9) segment 3 (PA) 3768.3 0.000000e+00 2114/2151 (98%)
EPI497541 A/environment/Jiangxi/02899/2012 (A/H9N2) segment 3 (PA) 3762.7 0.000000e+00 2113/2151 (98%)
EPI497532 A/environment/Jiangxi/02895/2012 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2112/2151 (98%)
EPI487858 A/chicken/Rizhao/1436/2013 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2112/2151 (98%)
EPI487857 A/chicken/Rizhao/1363/2013 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2112/2151 (98%)
EPI487854 A/chicken/Rizhao/853/2013 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2112/2151 (98%)
EPI487853 A/chicken/Rizhao/811/2013 (A/H9N2) segment 3 (PA) 3757.2 0.000000e+00 2112/2151 (98%)
EPI497847 A/environment/Zhenjiang/4/2013 (A/H7N9) segment 3 (PA) 3751.7 0.000000e+00 2111/2151 (98%)
EPI466294 A/chicken/Jiangsu/XZMG/2012 (A/H9N2) segment 3 (PA) 3751.7 0.000000e+00 2111/2151 (98%)
EPI457785 A/chicken/Shanghai/S1358/2013 (A/H7N9) segment 3 (PA) 3751.7 0.000000e+00 2111/2151 (98%)
EPI515821 A/Chicken/Suzhou/097-2/2013 (A/H9N2) segment 3 (PA) 3749.8 0.000000e+00 2108/2147 (98%)
EPI532335 A/chicken/Zhejiang/C497/2013 (A/H9N2) segment 3 (PA) 3746.1 0.000000e+00 2110/2151 (98%)
EPI497516 A/environment/Jiangxi/00449/2013 (A/H9N2) segment 3 (PA) 3746.1 0.000000e+00 2110/2151 (98%)
EPI466492 A/chicken/Jiangsu/CZ1/2012 (A/H9N2) segment 3 (PA) 3746.1 0.000000e+00 2110/2151 (98%)
EPI460766 A/Nanjing/3/2013 (A/H7N9) segment 3 (PA) 3746.1 0.000000e+00 2110/2151 (98%)
EPI532334 A/chicken/Zhejiang/C494/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%)
EPI532333 A/chicken/Zhejiang/C487/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%)
EPI532292 A/pigeon/Zhejiang/P1/2013 (A/H7N9) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%)
EPI497525 A/environment/Jiangxi/00452/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%)
EPI497499 A/environment/Chongqing/00516/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2110/2152 (98%)
EPI466470 A/chicken/Jiangsu/NTTZ/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%)
EPI466454 A/chicken/Jiangsu/ZJ4/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%)
EPI466342 A/chicken/Jiangsu/XZWHL/2012 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%)
EPI457857 A/chicken/Jiangsu/SC099/2013 (A/H7N9) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%)
EPI450830 A/quail/Hangzhou/35/2013 (A/H9N2) segment 3 (PA) 3740.6 0.000000e+00 2109/2151 (98%)
EPI487840 A/chicken/Wenzhou/614/2013 (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2108/2151 (98%)
EPI487828 A/chicken/Wenzhou/666/2013 (A/H7N7) segment 3 (PA) 3735.0 0.000000e+00 2108/2151 (98%)
EPI468351 A/chicken/Hangzhou/48-2/2013(H9N2) (A/H9N2) segment 3 (PA) 3735.0 0.000000e+00 2108/2151 (98%)
EPI443658 A/chicken/Hangzhou/48-1/2013(H7N9) (A/H7N9) segment 3 (PA) 3735.0 0.000000e+00 2108/2151 (98%)
EPI487839 A/chicken/Wenzhou/606/2013 (A/H9N2) segment 3 (PA) 3731.4 0.000000e+00 2107/2151 (97%)
EPI466446 A/chicken/Jiangsu/CZJT2/2013 (A/H9N2) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%)
EPI457761 A/chicken/Zhejiang/SD007/2013 (A/H7N9) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%)
EPI457657 A/environment/Shanghai/S1438/2013 (A/H7N9) segment 3 (PA) 3729.5 0.000000e+00 2107/2151 (97%)
EPI466438 A/chicken/Jiangsu/XZ6/2012 (A/H9N2) segment 3 (PA) 3724.0 0.000000e+00 2106/2151 (97%)
EPI492300 A/environment/Zhejiang/14/2013 (A/H9N2) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%)
EPI447908 A/shanghai/05/2013 (A/H7N9) segment 3 (PA) 3718.4 0.000000e+00 2105/2151 (97%)
EPI542413 A/chicken/Long An/63/2014 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%)
EPI466500 A/chicken/Jiangsu/CZWJ5/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%)
EPI466478 A/chicken/Jiangsu/HA2/2013 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%)
EPI457665 A/environment/Shanghai/S1437/2013 (A/H7N9) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%)
EPI447719 A/Shandong/01/2013 (A/H7N9) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%)
EPI351705 A/chicken/Zhejiang/607/2011 (A/H9N2) segment 3 (PA) 3712.9 0.000000e+00 2104/2151 (97%)
EPI542406 A/muscovy duck/Vietnam/LBM694/2014 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%)
EPI515812 A/Chicken/Nanjing/503/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%)
EPI492303 A/environment/Zhejiang/15/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2104/2152 (97%)
EPI487842 A/silkie chicken/Wenzhou/812/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%)
EPI467589 A/chicken/Shanghai/020/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%)
EPI466462 A/duck/Jiangsu/YC2/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%)
EPI466430 A/chicken/Jiangsu/ZJDT1/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%)
EPI451170 A/chicken/Guangdong/LG1/2013 (A/H9N2) segment 3 (PA) 3707.3 0.000000e+00 2103/2151 (97%)
EPI509884 A/Hong Kong/8113530/2014 (A/H7N9) segment 3 (PA) 3701.8 0.000000e+00 2103/2152 (97%)
EPI465412 A/Enviroment/Zhenjiang/h9/2013 (A/H9N2) segment 3 (PA) 3701.8 0.000000e+00 2102/2151 (97%)
EPI515803 A/Chicken/Nanjing/106-2/2013 (A/H9N2) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%)
EPI487847 A/chicken/Rizhao/55/2013 (A/H9N2) segment 3 (PA) 3696.3 0.000000e+00 2101/2151 (97%)
EPI531796 A/Taiwan/1/2014 (A/H7N9) segment 3 (PA) 3690.7 0.000000e+00 2100/2151 (97%)
EPI506277 A/pigeon/Shanghai/JC1/2013 (A/H9N2) segment 3 (PA) 3690.7 0.000000e+00 2101/2152 (97%)
EPI416223 A/chicken/Shanghai/C2/2012 (A/H9N2) segment 3 (PA) 3679.6 0.000000e+00 2098/2151 (97%)
EPI416222 A/chicken/Shanghai/C1/2012 (A/H9N2) segment 3 (PA) 3677.8 0.000000e+00 2093/2144 (97%)
EPI529227 A/chicken/Shanghai/1107/2013 (A/H9N2) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%)
EPI457649 A/environment/Shanghai/S1439/2013 (A/H7N9) segment 3 (PA) 3674.1 0.000000e+00 2097/2151 (97%)
EPI532332 A/chicken/Zhejiang/C484/2013 (A/H9N2) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%)
EPI416224 A/chicken/Shanghai/C3/2012 (A/H9N2) segment 3 (PA) 3668.6 0.000000e+00 2096/2151 (97%)
EPI532293 A/pigeon/Zhejiang/P2/2013 (A/H7N9) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%)
EPI466239 A/chicken/Jiangsu/WJHDL/2012 (A/H9N2) segment 3 (PA) 3663.0 0.000000e+00 2091/2145 (97%)
EPI466213 A/Mallard/Zhejiang/136/2013 (A/H9N2) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%)
EPI457745 A/chicken/Zhejiang/SD033/2013 (A/H7N9) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%)
EPI453476 A/Zhejiang/HZ1/2013 (A/H7N9) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%)
EPI447747 A/Zhejiang/02/2013 (A/H7N9) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%)
EPI441795 A/Zhejiang/DTID-ZJU01/2013 (A/H7N9) segment 3 (PA) 3663.0 0.000000e+00 2095/2151 (97%)
EPI487652 A/chicken/Hong Kong/HH8/2010 (A/H9N2) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%)
EPI457769 A/chicken/Shanghai/S1413/2013 (A/H7N9) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%)
EPI457729 A/duck/Zhejiang/SC410/2013 (A/H7N9) segment 3 (PA) 3657.5 0.000000e+00 2094/2151 (97%)
EPI423866 A/brambling/Beijing/16/2012 (A/H9N2) segment 3 (PA) 3657.5 0.000000e+00 2095/2152 (97%)
EPI548408 A/chicken/Jilin/SD001/2014 (A/H9N2) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%)
EPI487650 A/chicken/Hong Kong/FL96/2010 (A/H9N2) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%)
EPI457841 A/chicken/Jiangxi/SD001/2013 (A/H7N9) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%)
EPI443041 A/Zhejiang/2/2013 (A/H7N9) segment 3 (PA) 3651.9 0.000000e+00 2092/2151 (97%)
EPI440689 A/Environment/Shanghai/S1088/2013 (A/H7N9) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%)
EPI439490 A/Shanghai/1/2013 (A/H7N9) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%)
EPI342585 A/chicken/Zhejiang/Q1D4/2010 (A/H9N2) segment 3 (PA) 3651.9 0.000000e+00 2094/2152 (97%)
EPI472227 A/chicken/Guangxi/G8/2009 (A/H9N2) segment 3 (PA) 3648.3 0.000000e+00 2093/2152 (97%)
EPI545208 A/pigeon/Wuxi/0405007G/2013 (A/H7N9) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%)
EPI545207 A/duck/Sunan/040802G/2013 (A/H7N9) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%)
EPI542255 A/Shanghai/MH01/2013 (A/H7N9) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%)
EPI532269 A/chicken/Zhejiang/C483/2013 (A/H7N9) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%)
EPI532268 A/chicken/Zhejiang/C481/2013 (A/H7N9) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%)
EPI497934 A/Nanjing/6/2013 (A/H7N9) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%)
EPI497890 A/Wuxi/4/2013 (A/H7N9) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%)
EPI497844 A/environment/Suzhou/8/2013 (A/H7N9) segment 3 (PA) 3646.4 0.000000e+00 2093/2152 (97%)

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PostPosted: Tue Dec 30, 2014 5:47 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
PA Novel from H10N8 case

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PostPosted: Tue Dec 30, 2014 5:50 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI553463 A/Hong Kong/8194273/2014 (A/H7N9) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%)
EPI490980 A/environment/Guangdong/C13280011/2013 (A/H9N2) segment 5 (NP) 2654.8 0.000000e+00 1477/1497 (98%)
EPI498030 A/Hong Kong/308/2014 (A/H9N2) segment 5 (NP) 2649.2 0.000000e+00 1476/1497 (98%)
EPI470526 A/chicken/Hong Kong/TC8/2012 (A/H9N2) segment 5 (NP) 2571.7 0.000000e+00 1462/1497 (97%)
EPI491020 A/environment/Guangdong/2013XN11652/2013 (A/H9N2) segment 5 (NP) 2566.1 0.000000e+00 1462/1498 (97%)
EPI491028 A/environment/Guangdong/C13058252/2013 (A/H9N2) segment 5 (NP) 2560.6 0.000000e+00 1461/1498 (97%)
EPI491012 A/environment/Guangdong/C13058260/2013 (A/H9N2) segment 5 (NP) 2560.6 0.000000e+00 1461/1498 (97%)
EPI529262 A/turtledove/Guangxi/49B6/2013 (A/H9N2) segment 5 (NP) 2555.0 0.000000e+00 1459/1497 (97%)
EPI342586 A/chicken/Zhejiang/Q1D4/2010 (A/H9N2) segment 5 (NP) 2529.2 0.000000e+00 1453/1495 (97%)
EPI470497 A/chicken/Hong Kong/HH8/2010 (A/H9N2) segment 5 (NP) 2527.3 0.000000e+00 1454/1497 (97%)
EPI470503 A/chicken/Hong Kong/YU219/2010 (A/H9N2) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%)
EPI470502 A/chicken/Hong Kong/YU218/2010 (A/H9N2) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%)
EPI470501 A/chicken/Hong Kong/YU214/2010 (A/H9N2) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%)
EPI296162 A/swine/Taizhou/5/2008 (A/H9N2) segment 5 (NP) 2521.8 0.000000e+00 1453/1497 (97%)
EPI470496 A/chicken/Hong Kong/FY64W/2010 (A/H9N2) segment 5 (NP) 2516.3 0.000000e+00 1453/1498 (96%)
EPI351703 A/chicken/Zhejiang/611/2011 (A/H9N2) segment 5 (NP) 2516.3 0.000000e+00 1452/1497 (96%)
EPI416621 A/chicken/Shandong/03/2010 (A/H9N2) segment 5 (NP) 2512.6 0.000000e+00 1448/1492 (97%)
EPI342593 A/chicken/Jiangsu/Q3/2010 (A/H9N2) segment 5 (NP) 2512.6 0.000000e+00 1450/1495 (96%)
EPI416637 A/chicken/Shandong/BD/2010 (A/H9N2) segment 5 (NP) 2510.7 0.000000e+00 1452/1498 (96%)
EPI441098 A/duck/Shanghai/C163/2009 (A/H9N2) segment 5 (NP) 2507.0 0.000000e+00 1449/1495 (96%)
EPI416653 A/chicken/Shandong/KD/2009 (A/H9N2) segment 5 (NP) 2507.0 0.000000e+00 1447/1492 (96%)
EPI509873 A/Hong Kong/4495/2014 (A/H7N9) segment 5 (NP) 2505.2 0.000000e+00 1451/1498 (96%)
EPI476702 A/Guangdong/1/2013 (A/H7N9) segment 5 (NP) 2505.2 0.000000e+00 1451/1498 (96%)
EPI466371 A/chicken/Jiangsu/DTNSZ/2011 (A/H9N2) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%)
EPI351701 A/chicken/Zhejiang/329/2011 (A/H9N2) segment 5 (NP) 2505.2 0.000000e+00 1450/1497 (96%)
EPI509881 A/Hong Kong/8113530/2014 (A/H7N9) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%)
EPI503500 A/Huizhou/01/2013 (A/H7N9) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%)
EPI487168 A/chicken/Shandong/397/2010 (A/H9N2) segment 5 (NP) 2499.6 0.000000e+00 1450/1498 (96%)
EPI398968 A/chicken/Hebei/1102/2010 (A/H5N2) segment 5 (NP) 2499.6 0.000000e+00 1449/1497 (96%)
EPI529246 A/chicken/Shanghai/A/2010 (A/H9N2) segment 5 (NP) 2495.9 0.000000e+00 1449/1497 (96%)
EPI530351 A/chicken/Hebei/1102-MA/2010 (A/H5N2) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%)
EPI499908 A/Guangdong/02/2013 (A/H7N9) segment 5 (NP) 2494.1 0.000000e+00 1450/1499 (96%)
EPI498793 A/Hong Kong/734/2014 (A/H7N9) segment 5 (NP) 2494.1 0.000000e+00 1449/1498 (96%)
EPI470509 A/chicken/Hong Kong/TC18/2011 (A/H9N2) segment 5 (NP) 2494.1 0.000000e+00 1449/1498 (96%)
EPI470507 A/chicken/Hong Kong/CRA45W/2010 (A/H9N2) segment 5 (NP) 2494.1 0.000000e+00 1449/1498 (96%)
EPI466387 A/chicken/Jiangsu/YZ0511/2011 (A/H9N2) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%)
EPI461705 A/duck/Hunan/S4111/2011 (A/H9N2) segment 5 (NP) 2494.1 0.000000e+00 1448/1497 (96%)
EPI492480 A/chicken/Gansu/419/2012 (A/H9N2) segment 5 (NP) 2490.4 0.000000e+00 1447/1496 (96%)
EPI472228 A/chicken/Guangxi/G8/2009 (A/H9N2) segment 5 (NP) 2490.4 0.000000e+00 1446/1495 (96%)
EPI516599 A/Hong Kong/8122430/2014 (A/H7N9) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%)
EPI516591 A/Hong Kong/5581/2014 (A/H7N9) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%)
EPI487116 A/chicken/Shandong/513/2011 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%)
EPI470510 A/chicken/Hong Kong/YO28/2011 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%)
EPI470506 A/chicken/Hong Kong/CRA45/2010 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1448/1498 (96%)
EPI470495 A/chicken/Hong Kong/FL96/2010 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%)
EPI466467 A/chicken/Jiangsu/NTTZ/2013 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%)
EPI466363 A/chicken/Jiangsu/YZ0611/2011 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%)
EPI466283 A/chicken/Shangdong/SDWD/2011 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%)
EPI385888 A/chicken/Anhui/HF/2010 (A/H9N2) segment 5 (NP) 2488.6 0.000000e+00 1447/1497 (96%)
EPI390565 A/chicken/Wuxi/7/2010 (A/H9N2) segment 5 (NP) 2486.7 0.000000e+00 1434/1478 (97%)
EPI529249 A/chicken/Shanghai/D/2011 (A/H9N2) segment 5 (NP) 2484.9 0.000000e+00 1446/1496 (96%)
EPI441099 A/duck/Shanghai/C164/2009 (A/H9N2) segment 5 (NP) 2484.9 0.000000e+00 1445/1495 (96%)
EPI507080 A/Hong Kong/3263/2014 (A/H7N9) segment 5 (NP) 2483.0 0.000000e+00 1447/1498 (96%)
EPI506226 A/Guangdong/04/2013 (A/H7N9) segment 5 (NP) 2483.0 0.000000e+00 1448/1499 (96%)
EPI492273 A/environment/Zhejiang/14/2013 (A/H9N2) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%)
EPI469535 A/Jiangsu/1/2013 (A/H7N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%)
EPI466403 A/chicken/Jiangsu/MYJMF/2012 (A/H9N2) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%)
EPI453605 A/Nanjing/1/2013 (A/H7N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%)
EPI447885 A/chicken/Anhui-Chuzhou/01/2013 (A/H7N9) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%)
EPI423868 A/brambling/Beijing/16/2012 (A/H9N2) segment 5 (NP) 2483.0 0.000000e+00 1446/1497 (96%)
EPI532343 A/chicken/Zhejiang/C497/2013 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI532341 A/chicken/Zhejiang/C487/2013 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI532266 A/chicken/Zhejiang/C481/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI531121 A/Anhui/1-DEWH730/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI520857 A/Hong Kong/5731/2014 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1446/1498 (96%)
EPI508927 A/tree sparrow/Shanghai/01/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI506281 A/pigeon/Shanghai/JC1/2013 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI506234 A/Guangdong/05/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1447/1499 (96%)
EPI506219 A/Guangdong/03/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1447/1499 (96%)
EPI502366 A/Hong Kong/2212982/2014 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1447/1499 (96%)
EPI498088 A/environment/Suzhou/14/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI497919 A/Nanjing/7/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI497866 A/Wuxi/3/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI497830 A/environment/Suzhou/8/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI497815 A/Nanjing/2/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI492287 A/environment/Zhejiang/16/2013 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI492280 A/environment/Zhejiang/15/2013 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI490972 A/Environment/Guangdong/C13281030/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI490964 A/Environment/Guangdong/C13281025/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI477403 A/Zhejiang/20/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI473794 A/environment/Hangzhou/34-2/2013(H9N2) (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI467306 A/Wuxi/1/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI466427 A/chicken/Jiangsu/ZJDT1/2013 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1446/1498 (96%)
EPI466419 A/chicken/Jiangsu/WJYBF/2012 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1446/1498 (96%)
EPI466379 A/chicken/Jiangsu/CZYWP/2012 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1446/1498 (96%)
EPI466339 A/chicken/Jiangsu/XZWHL/2012 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI466331 A/chicken/Jiangsu/XZZSL/2012 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI466291 A/chicken/Jiangsu/XZMG/2012 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI466251 A/chicken/Jiangsu/XZ38/2012 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI466236 A/chicken/Jiangsu/WJHDL/2012 (A/H9N2) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI460776 A/Nanjing/5/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI457870 A/chicken/Jiangsu/S002/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI457862 A/chicken/Jiangsu/SC035/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI457846 A/chicken/Jiangsu/SC537/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI457766 A/chicken/Shanghai/S1413/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI457750 A/chicken/Zhejiang/SD019/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI457742 A/chicken/Zhejiang/SD033/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI457734 A/duck/Anhui/SC702/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI457726 A/duck/Zhejiang/SC410/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)
EPI457638 A/homing pigeon/Jiangsu/SD184/2013 (A/H7N9) segment 5 (NP) 2477.5 0.000000e+00 1445/1497 (96%)

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PostPosted: Tue Dec 30, 2014 5:52 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
Novel H9N2 from H9N2 human case

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PostPosted: Tue Dec 30, 2014 6:11 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI553464 A/Hong Kong/8194273/2014 (A/H7N9) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%)
EPI545806 A/pigeon/Wuxi/0405007G/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI545799 A/duck/Sunan/040802G/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI531122 A/Anhui/1-DEWH730/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI515800 A/Chicken/Suzhou/097-1/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI504723 A/Shanghai/5190T/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI504718 A/Shanghai/5190T/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI498091 A/environment/Suzhou/14/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI497922 A/Nanjing/7/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI497898 A/Suzhou/3/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI497877 A/Wuxi/4/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI497840 A/environment/Zhenjiang/4/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI492275 A/environment/Zhejiang/14/2013 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI492268 A/environment/Zhejiang/13/2013 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI492261 A/environment/Zhejiang/09/2013 (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI487904 A/chicken/Zhejiang/PA-DTID-ZJU01/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI477315 A/Changsha/1/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI473797 A/environment/Hangzhou/34-2/2013(H9N2) (A/H9N2) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI471843 A/chicken/Shanghai/019/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI469515 A/chicken/Rizhao/515/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI468348 A/environment/Hangzhou/109-2/2013(H5N1) (A/H5N1) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI464588 A/Huzhou/5/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI464587 A/Huzhou/4/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI464585 A/Huzhou/1/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI464584 A/Environment/Huzhou/C58/2013 (A/H9N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI464582 A/Chicken/Huzhou/C73/2013 (A/H9N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI464581 A/Chicken/Huzhou/C72/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI464580 A/Chicken/Huzhou/C54/2013 (A/H7) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI461481 A/Nanchang/1/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI460779 A/Nanjing/5/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI460771 A/Nanjing/3/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457879 A/chicken/Guangdong/SD641/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457871 A/chicken/Jiangsu/S002/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457855 A/chicken/Jiangsu/SC099/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457847 A/chicken/Jiangsu/SC537/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457831 A/chicken/Shanghai/S1055/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457823 A/chicken/Shanghai/S1076/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457815 A/chicken/Shanghai/S1077/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457807 A/chicken/Shanghai/S1078/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457799 A/chicken/Shanghai/S1079/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457783 A/chicken/Shanghai/S1358/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457775 A/chicken/Shanghai/S1410/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457767 A/chicken/Shanghai/S1413/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457751 A/chicken/Zhejiang/SD019/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457743 A/chicken/Zhejiang/SD033/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457727 A/duck/Zhejiang/SC410/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457719 A/environment/Fujian/SC337/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457711 A/environment/Henan/SC232/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457703 A/environment/Henan/SD429/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457695 A/environment/Shandong/SD038/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457639 A/homing pigeon/Jiangsu/SD184/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457631 A/pigeon/Shanghai/S1421/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI457623 A/pigeon/Shanghai/S1423/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI451276 A/Shanghai/Patient6/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI451258 A/Shanghai/Patient2/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI451018 A/Shanghai/patient1/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447958 A/Shanghai/3/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447918 A/Jiangsu/01/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447895 A/Shanghai/07/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447799 A/Shanghai/11/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447774 A/Shanghai/14/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447753 A/Shanghai/9/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447739 A/Shanghai/15/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447718 A/Shandong/01/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447711 A/Fujian/01/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447704 A/Jiangxi/01/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447697 A/Hunan/01/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447676 A/Jiangsu/06/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447662 A/Jiangsu/08/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447655 A/Jiangsu/09/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI447634 A/Anhui/03/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI446455 A/Hangzhou/2/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI445916 A/Taiwan/1/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI443679 A/environment/Hangzhou/109-1/2013(H7N9) (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI443655 A/environment/Hangzhou/37/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI443574 A/environment/Hangzhou/34-1/2013(H7N9) (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI440695 A/Pigeon/Shanghai/S1069/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI440687 A/Environment/Shanghai/S1088/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI440679 A/Chicken/Shanghai/S1053/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI439510 A/Anhui/1/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI439499 A/Shanghai/2/2013 (A/H7N9) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI515792 A/Chicken/Nanjing/761/2013 (A/H7N9) segment 8 (NS) 1511.7 0.000000e+00 830/836 (99%)
EPI545792 A/chicken/Suzhou/040201H/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI542315 A/Shanghai/MH01/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI532275 A/chicken/Zhejiang/C483/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI532274 A/chicken/Zhejiang/C481/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI531805 A/Taiwan/2/2014 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI508930 A/tree sparrow/Shanghai/01/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI507151 A/tree sparrow/Shanghai/01/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI503523 A/environment/Guangdong/25/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI503522 A/environment/Guangdong/30/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI498102 A/Xuzhou/1/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI498031 A/Hong Kong/308/2014 (A/H9N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI497914 A/Suzhou/5/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI497906 A/Nanjing/6/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI497869 A/Wuxi/3/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI497853 A/Nanjing/4/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI497833 A/environment/Suzhou/8/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI477316 A/Changsha/2/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI469536 A/Jiangsu/1/2013 (A/H7N9) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)

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