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H5N8 Healthy Wigeon Sequence from Sakha Russia
http://fluboard.rhizalabs.com/forum/viewtopic.php?f=5&t=13205
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Author:  niman [ Sun Dec 28, 2014 7:35 am ]
Post subject:  H5N8 Healthy Wigeon Sequence from Sakha Russia

State Research Center of Virology and Biotechnology Vector has released H5 and N8 sequences from wigeon, A/wigeon/Sakha/1/2014 (deposited at GISAID).

Author:  niman [ Sun Dec 28, 2014 7:36 am ]
Post subject:  Re: H5N8 Healthy Wigeon Sequence from Sakha Russia

Isolate name:
A/wigeon/Sakha/1/2014
Isolate ID:
EPI_ISL_169427
Passage details/history:

Type:
A / H5N8
Lineage:

Sample information
Collection date:
2014-09-25
Host
Avian
Additional host information:
wigeon
Domestic status:
Wild
Is vaccinated:
N
Location:
Russian Federation / Sakha (Yakutia) Republic
Additional location information:

Health status:
Healthy
Specimen source:
Organ
Strain or commercial product name used for vaccination:

Institute information
Originating lab:
State Research Center of Virology and Biotechnology Vector

Sample ID given by the sample provider:

Address:
State Research Center of Virology and Biotechnology Vector
Emerging Zoonotic Diseases and Influenza
Novosibirsk Region
630559 Koltsovo
Russian Federation

Submitting lab:
State Research Center of Virology and Biotechnology Vector

Sample ID given by the submitting laboratory:

Authors:
Susloparov, I;
Kolosova, N;
Goncharova, N;
Marchenko, V;
Ryzhikov, A

Address:
State Research Center of Virology and Biotechnology Vector
Emerging Zoonotic Diseases and Influenza
Novosibirsk Region
630559 Koltsovo
Russian Federation

Publication
Publication
In vivo antiviral resistance
Phenotype
Genotype
Unspecified
Antiviral resistance tested by experimental procedures
Adamantanes:
Unknown
Oseltamivir:
Unknown
Zanamivir:
Unknown
Peramivir:
Unknown
Other:
Unknown










Additional information
Antigenic characterization:

Note:

Sequence
segment identifier length accession # INSDC Sequence

HA
A/wigeon/Sakha/1/2014
1776
EPI553349


NA
A/wigeon/Sakha/1/2014
1460
EPI553350

Submitter information
Submitter:
Susloparov, Ivan
Submission Date:
2014-12-28
Last modifier:
Susloparov, Ivan
Last modified:
2014-12-28
Address:
Vector
SRC VB
630559 Koltcovo
Russian Federation

Author:  niman [ Sun Dec 28, 2014 7:44 am ]
Post subject:  Re: H5N8 Healthy Wigeon Sequence from Sakha Russia

EPI553349 A/wigeon/Sakha/1/2014 (A/H5N8) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%)
EPI547673 A/duck/England/36254/14 (A/H5N8) segment 4 (HA) 3131.2 0.000000e+00 1701/1704 (99%)
EPI552746 A/turkey/Germany/R2474-L00899/2014 (A/H5N8) segment 4 (HA) 3120.1 0.000000e+00 1699/1704 (99%)
EPI548493 A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 4 (HA) 3120.1 0.000000e+00 1699/1704 (99%)
EPI548485 A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 4 (HA) 3120.1 0.000000e+00 1699/1704 (99%)
EPI547678 A/Chicken/Netherlands/14015526/2014 (A/H5N8) segment 4 (HA) 3120.1 0.000000e+00 1699/1704 (99%)
EPI548623 A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 4 (HA) 3114.6 0.000000e+00 1698/1704 (99%)
EPI509704 A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 4 (HA) 3103.5 0.000000e+00 1696/1704 (99%)
EPI544756 A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 4 (HA) 3098.0 0.000000e+00 1687/1692 (99%)
EPI509709 A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 4 (HA) 3092.4 0.000000e+00 1694/1704 (99%)
EPI542628 A/mallard/Korea/W452/2014 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%)
EPI517161 A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 4 (HA) 3075.8 0.000000e+00 1691/1704 (99%)
EPI552776 A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 4 (HA) 3073.9 0.000000e+00 1676/1682 (99%)
EPI552768 A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 4 (HA) 3073.9 0.000000e+00 1683/1692 (99%)
EPI552760 A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 4 (HA) 3031.5 0.000000e+00 1647/1650 (99%)
EPI551149 A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 4 (HA) 3027.8 0.000000e+00 1658/1667 (99%)
EPI553208 A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 4 (HA) 3011.2 0.000000e+00 1678/1702 (98%)
EPI553343 A/chicken/Miyazaki/7/2014 (A/H5N8) segment 4 (HA) 3009.3 0.000000e+00 1679/1704 (98%)
EPI551143 A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 4 (HA) 2959.5 0.000000e+00 1608/1611 (99%)
EPI543010 A/duck/Beijing/CT01/2014 (A/H5N8) segment 4 (HA) 2870.8 0.000000e+00 1590/1608 (98%)
EPI542617 A/duck/Beijing/FS01/2013 (A/H5N8) segment 4 (HA) 2854.2 0.000000e+00 1586/1608 (98%)
EPI543002 A/duck/Beijing/FS01/2014 (A/H5N8) segment 4 (HA) 2848.7 0.000000e+00 1587/1609 (98%)
EPI475579 A/wild duck/Shandong/628/2011 (A/H5N1) segment 4 (HA) 2848.7 0.000000e+00 1652/1706 (96%)
EPI442017 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 4 (HA) 2843.1 0.000000e+00 1651/1706 (96%)
EPI553144 A/turkey/Italy/14VIR7898-10/2014 (A/H5N8) segment 4 (HA) 2828.3 0.000000e+00 1540/1545 (99%)
EPI399960 A/duck/Jiangsu/m234/2012 (A/H5N2) segment 4 (HA) 2815.4 0.000000e+00 1647/1707 (96%)
EPI398966 A/goose/Eastern China/1112/2011 (A/H5N2) segment 4 (HA) 2815.4 0.000000e+00 1646/1706 (96%)
EPI431456 A/duck/Hebei/3/2011 (A/H5N2) segment 4 (HA) 2798.8 0.000000e+00 1643/1706 (96%)
EPI398965 A/duck/Eastern China/1111/2011 (A/H5N2) segment 4 (HA) 2793.3 0.000000e+00 1642/1706 (96%)
EPI509698 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 4 (HA) 2776.6 0.000000e+00 1639/1706 (96%)
EPI530054 A/duck/Jiangxi/95/2014 (A/H5N6) segment 4 (HA) 2771.1 0.000000e+00 1639/1707 (96%)
EPI544892 A/duck/Shandong/Q1/2013 (A/H5N8) segment 4 (HA) 2765.6 0.000000e+00 1639/1708 (95%)
EPI531456 A/duck/Guangdong/GD01/2014 (A/H5N6) segment 4 (HA) 2765.6 0.000000e+00 1638/1707 (95%)
EPI530986 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 4 (HA) 2748.9 0.000000e+00 1634/1706 (95%)
EPI507673 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 4 (HA) 2748.9 0.000000e+00 1634/1706 (95%)
EPI530985 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 4 (HA) 2743.4 0.000000e+00 1633/1706 (95%)
EPI530063 A/environment/Shenzhen/25-24/2013 (A/H5N6) segment 4 (HA) 2743.4 0.000000e+00 1634/1707 (95%)
EPI493825 A/duck/Guangdong/wy19/2008 (A/H5N5) segment 4 (HA) 2743.4 0.000000e+00 1634/1707 (95%)
EPI550768 A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1633/1708 (95%)
EPI550763 A/duck/Laos/XBY004/2014 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1633/1708 (95%)
EPI550759 A/chicken/Laos/XBY003/2014 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1633/1708 (95%)
EPI550757 A/duck/Laos/LPQ002/2014 (A/H5N6) segment 4 (HA) 2732.3 0.000000e+00 1633/1708 (95%)
EPI431448 A/duck/Hebei/2/2011 (A/H5N2) segment 4 (HA) 2728.6 0.000000e+00 1631/1707 (95%)
EPI550752 A/chicken/Laos/LPQ001/2014 (A/H5N6) segment 4 (HA) 2726.8 0.000000e+00 1632/1708 (95%)
EPI499478 A/chicken/China/AH/2012 (A/H5N1) segment 4 (HA) 2721.2 0.000000e+00 1629/1706 (95%)
EPI493817 A/duck/Guangdong/wy11/2008 (A/H5N5) segment 4 (HA) 2721.2 0.000000e+00 1631/1708 (95%)
EPI328878 A/duck/Eastern China/031/2009 (A/H5N5) segment 4 (HA) 2676.9 0.000000e+00 1621/1706 (95%)
EPI328870 A/duck/Eastern China/008/2008 (A/H5N5) segment 4 (HA) 2649.2 0.000000e+00 1617/1707 (94%)
EPI493833 A/duck/Guangdong/wy24/2008 (A/H5N5) segment 4 (HA) 2645.5 0.000000e+00 1619/1710 (94%)
EPI547402 A/environment/Zhenjiang/C13/2013 (A/H5N6) segment 4 (HA) 2643.7 0.000000e+00 1619/1710 (94%)
EPI328886 A/duck/Eastern China/108/2008 (A/H5N1) segment 4 (HA) 2643.7 0.000000e+00 1616/1707 (94%)
EPI533583 A/Sichuan/26221/2014 (A/H5N6) segment 4 (HA) 2638.1 0.000000e+00 1617/1709 (94%)
EPI442025 A/quail/Jiangsu/k0104/2010 (A/H5N5) segment 4 (HA) 2634.4 0.000000e+00 1617/1710 (94%)
EPI442001 A/goose/Shandong/k1204/2009 (A/H5N5) segment 4 (HA) 2588.3 0.000000e+00 1606/1707 (94%)
EPI442009 A/goose/Guangdong/k0103/2010 (A/H5N5) segment 4 (HA) 2573.5 0.000000e+00 1607/1711 (93%)
EPI279949 A/Zhejiang/1/2006 (A/H5N1) segment 4 (HA) 2527.3 0.000000e+00 1595/1707 (93%)
EPI181297 A/Zhejiang/1/2006 (A/H5N1) segment 4 (HA) 2527.3 0.000000e+00 1595/1707 (93%)
EPI275982 A/duck/Hubei/49/2005 (A/H5N1) segment 4 (HA) 2521.8 0.000000e+00 1595/1708 (93%)
EPI127406 A/wild duck/Hunan/211/2005 (A/H5N1) segment 4 (HA) 2521.8 0.000000e+00 1594/1707 (93%)
EPI127384 A/wild duck/Hunan/021/2005 (A/H5N1) segment 4 (HA) 2521.8 0.000000e+00 1594/1707 (93%)
EPI107769 A/duck/Guangxi/288/2006 (A/H5N1) segment 4 (HA) 2521.8 0.000000e+00 1588/1698 (93%)
EPI439897 A/goose/Guangdong/08/2005 (A/H5N1) segment 4 (HA) 2520.0 0.000000e+00 1594/1707 (93%)
EPI399886 A/duck/HuBei/03/2010 (A/H5N5) segment 4 (HA) 2516.3 0.000000e+00 1594/1708 (93%)
EPI337076 A/Sichuan/2/2006 (A/H5N1) segment 4 (HA) 2516.3 0.000000e+00 1593/1707 (93%)
EPI280104 A/Guangdong/1/2006 (A/H5N1) segment 4 (HA) 2516.3 0.000000e+00 1593/1707 (93%)
EPI276046 A/goose/Hubei/65/2005 (A/H5N1) segment 4 (HA) 2516.3 0.000000e+00 1593/1707 (93%)
EPI275774 A/chicken/Hunan/21/2005 (A/H5N1) segment 4 (HA) 2516.3 0.000000e+00 1594/1708 (93%)
EPI224777 A/Shanghai/1/2006 (A/H5N1) segment 4 (HA) 2516.3 0.000000e+00 1593/1707 (93%)
EPI181301 A/Guangdong/1/2006 (A/H5N1) segment 4 (HA) 2516.3 0.000000e+00 1593/1707 (93%)
EPI181298 A/Sichuan/1/2006 (A/H5N1) segment 4 (HA) 2516.3 0.000000e+00 1593/1707 (93%)
EPI164232 A/Sichuan/2/2006 (A/H5N1) segment 4 (HA) 2516.3 0.000000e+00 1593/1707 (93%)
EPI164224 A/Sichuan/1/2006 (A/H5N1) segment 4 (HA) 2516.3 0.000000e+00 1593/1707 (93%)
EPI107913 A/goose/Yunnan/1144/2006 (A/H5N1) segment 4 (HA) 2516.3 0.000000e+00 1587/1698 (93%)
EPI107829 A/goose/Guiyang/1304/2006 (A/H5N1) segment 4 (HA) 2516.3 0.000000e+00 1587/1698 (93%)
EPI107771 A/chicken/Guangxi/463/2006 (A/H5N1) segment 4 (HA) 2516.3 0.000000e+00 1587/1698 (93%)
EPI406406 A/Muscovy duck/Ca Mau/22/2007 (A/H5N1) segment 4 (HA) 2510.7 0.000000e+00 1593/1708 (93%)
EPI337107 A/Shanghai/1/2006 (A/H5N1) segment 4 (HA) 2510.7 0.000000e+00 1592/1707 (93%)
EPI280112 A/Shanghai/1/2006 (A/H5N1) segment 4 (HA) 2510.7 0.000000e+00 1592/1707 (93%)
EPI275966 A/duck/Anhui/56/2005 (A/H5N1) segment 4 (HA) 2510.7 0.000000e+00 1592/1707 (93%)
EPI275386 A/Anhui/2/2005 (A/H5N1) segment 4 (HA) 2510.7 0.000000e+00 1593/1708 (93%)
EPI227309 A/Mallard/Huadong/lk/2005 (A/H5N1) segment 4 (HA) 2510.7 0.000000e+00 1592/1707 (93%)
EPI170615 A/chicken/Vietnam/216/2005 (A/H5N1) segment 4 (HA) 2510.7 0.000000e+00 1592/1707 (93%)
EPI170607 A/Muscovy duck/Vietnam/217/2005 (A/H5N1) segment 4 (HA) 2510.7 0.000000e+00 1592/1707 (93%)
EPI170599 A/duck/Vietnam/218/2005 (A/H5N1) segment 4 (HA) 2510.7 0.000000e+00 1592/1707 (93%)
EPI170591 A/duck/Vietnam/219/2005 (A/H5N1) segment 4 (HA) 2510.7 0.000000e+00 1592/1707 (93%)
EPI108329 A/goose/Guangxi/1898/2006 (A/H5N1) segment 4 (HA) 2510.7 0.000000e+00 1586/1698 (93%)
EPI270188 A/Vietnam/UT30850/2005 (A/H5N1) segment 4 (HA) 2508.9 0.000000e+00 1589/1703 (93%)
EPI106243 A/duck/Laos/3295/2006 (A/H5N1) segment 4 (HA) 2508.9 0.000000e+00 1593/1708 (93%)
EPI286383 A/chicken/Cao Bang/07-42/2007 (A/H5N1) segment 4 (HA) 2505.2 0.000000e+00 1592/1708 (93%)
EPI286381 A/chicken/Nam Dinh/07-32/2007 (A/H5N1) segment 4 (HA) 2505.2 0.000000e+00 1592/1708 (93%)
EPI275958 A/duck/Anhui/1/06 (A/H5N1) segment 4 (HA) 2505.2 0.000000e+00 1594/1710 (93%)
EPI275870 A/chicken/Sichuan/81/2005 (A/H5N1) segment 4 (HA) 2505.2 0.000000e+00 1591/1707 (93%)
EPI227371 A/muscovy duck/VietNam/209/2005 (A/H5) segment 4 (HA) 2505.2 0.000000e+00 1591/1707 (93%)
EPI227010 A/chicken/Ninh Binh/209/2005 (A/H5N1) segment 4 (HA) 2505.2 0.000000e+00 1591/1707 (93%)
EPI181299 A/Fujian/1/2005 (A/H5N1) segment 4 (HA) 2505.2 0.000000e+00 1592/1708 (93%)
EPI180956 A/duck/Laos/22/2006 (A/H5N1) segment 4 (HA) 2505.2 0.000000e+00 1592/1708 (93%)
EPI180951 A/duck/Laos/25/2006 (A/H5N1) segment 4 (HA) 2505.2 0.000000e+00 1592/1708 (93%)
EPI174656 A/duck/Hunan/3340/2006 (A/H5N1) segment 4 (HA) 2505.2 0.000000e+00 1592/1708 (93%)
EPI170742 A/duck/Vietnam/215/2005 (A/H5N1) segment 4 (HA) 2505.2 0.000000e+00 1591/1707 (93%)
EPI170741 A/Muscovy duck/Vietnam/213/2005 (A/H5N1) segment 4 (HA) 2505.2 0.000000e+00 1591/1707 (93%)

Author:  niman [ Sun Dec 28, 2014 7:46 am ]
Post subject:  Re: H5N8 Healthy Wigeon Sequence from Sakha Russia

EPI553350 A/wigeon/Sakha/1/2014 (A/H5N8) segment 6 (NA) 2597.5 0.000000e+00 1406/1406 (100%)
EPI552748 A/turkey/Germany/R2474-L00899/2014 (A/H5N8) segment 6 (NA) 2586.4 0.000000e+00 1404/1406 (99%)
EPI547683 A/Chicken/Netherlands/14015526/2014 (A/H5N8) segment 6 (NA) 2586.4 0.000000e+00 1404/1406 (99%)
EPI544759 A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 6 (NA) 2586.4 0.000000e+00 1404/1406 (99%)
EPI548626 A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 6 (NA) 2580.9 0.000000e+00 1403/1406 (99%)
EPI553152 A/turkey/Germany-NI/R3372/2014 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%)
EPI548495 A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%)
EPI548487 A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%)
EPI547675 A/duck/England/36254/14 (A/H5N8) segment 6 (NA) 2575.3 0.000000e+00 1402/1406 (99%)
EPI509714 A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%)
EPI509706 A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 6 (NA) 2569.8 0.000000e+00 1401/1406 (99%)
EPI542632 A/mallard/Korea/W452/2014 (A/H5N8) segment 6 (NA) 2558.7 0.000000e+00 1399/1406 (99%)
EPI543012 A/duck/Beijing/CT01/2014 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%)
EPI517163 A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 6 (NA) 2553.2 0.000000e+00 1398/1406 (99%)
EPI551150 A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1383/1385 (99%)
EPI543004 A/duck/Beijing/FS01/2014 (A/H5N8) segment 6 (NA) 2547.7 0.000000e+00 1397/1406 (99%)
EPI553345 A/chicken/Miyazaki/7/2014 (A/H5N8) segment 6 (NA) 2542.1 0.000000e+00 1396/1406 (99%)
EPI552770 A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 6 (NA) 2538.4 0.000000e+00 1378/1380 (99%)
EPI552762 A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1375/1377 (99%)
EPI551144 A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 6 (NA) 2532.9 0.000000e+00 1375/1377 (99%)
EPI552778 A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 6 (NA) 2529.2 0.000000e+00 1377/1381 (99%)
EPI542627 A/duck/Beijing/FS01/2013 (A/H5N8) segment 6 (NA) 2477.5 0.000000e+00 1369/1385 (98%)
EPI553210 A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 6 (NA) 2459.0 0.000000e+00 1381/1406 (98%)
EPI544894 A/duck/Shandong/Q1/2013 (A/H5N8) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%)
EPI530990 A/duck/Zhejiang/6D18/2013 (A/H5N8) segment 6 (NA) 2431.3 0.000000e+00 1376/1406 (97%)
EPI530989 A/duck/Zhejiang/W24/2013 (A/H5N8) segment 6 (NA) 2425.8 0.000000e+00 1375/1406 (97%)
EPI442019 A/duck/Jiangsu/k1203/2010 (A/H5N8) segment 6 (NA) 2425.8 0.000000e+00 1367/1394 (98%)
EPI509700 A/breeder duck/Korea/Gochang1/2014 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%)
EPI507675 A/mallard duck/Shanghai/SH-9/2013 (A/H5N8) segment 6 (NA) 2420.2 0.000000e+00 1374/1406 (97%)
EPI485330 A/common shelduck/Mongolia/2185/2011 (A/H3N8) segment 6 (NA) 2165.4 0.000000e+00 1330/1408 (94%)
EPI132266 A/duck/Eastern China/90/2004 (A/H3N8) segment 6 (NA) 2154.3 0.000000e+00 1328/1408 (94%)
EPI132262 A/duck/Eastern China/19/2004 (A/H3N8) segment 6 (NA) 2143.2 0.000000e+00 1326/1408 (94%)
EPI326921 A/environment/Korea/SH12-6/2008 (A/H3N8) segment 6 (NA) 2132.2 0.000000e+00 1323/1407 (94%)
EPI416940 A/duck/Vietnam/OIE-2577/2011 (A/H3N8) segment 6 (NA) 2098.9 0.000000e+00 1318/1408 (93%)
EPI438257 A/duck/Vietnam/G18-1/2011 (A/H3N8) segment 6 (NA) 2082.3 0.000000e+00 1315/1408 (93%)
EPI387415 A/ruddy shelduck/Mongolia/1-26/2007 (A/H3N8) segment 6 (NA) 2082.3 0.000000e+00 1288/1367 (94%)
EPI387510 A/ruddy shelduck/Mongolia/2-79/2007 (A/H3N8) segment 6 (NA) 2060.1 0.000000e+00 1284/1367 (93%)
EPI387494 A/pintail/Mongolia/2-65/2007 (A/H3N8) segment 6 (NA) 2054.6 0.000000e+00 1283/1367 (93%)
EPI326920 A/environment/Korea/SH12-8/2008 (A/H3N8) segment 6 (NA) 2052.7 0.000000e+00 1280/1364 (93%)
EPI363489 A/duck/Guangxi/2736/2006 (A/H6N8) segment 6 (NA) 2049.1 0.000000e+00 1309/1408 (92%)
EPI485320 A/ruddy shelduck/Mongolia/1787/2011 (A/H3N8) segment 6 (NA) 1991.8 0.000000e+00 1289/1391 (92%)
EPI485328 A/common shelduck/Mongolia/2076/2011 (A/H3N8) segment 6 (NA) 1860.7 0.000000e+00 1257/1379 (91%)
EPI128912 A/duck/Ukraine/1/1963 (A/H3N8) segment 6 (NA) 1755.4 0.000000e+00 1262/1414 (89%)
EPI407886 A/duck/Ukraine/1963 (A/H3N8) segment 6 (NA) 1749.9 0.000000e+00 1262/1415 (89%)
EPI42182 A/duck/Ukraine/1/1963 (A/H3N8) segment 6 (NA) 1749.9 0.000000e+00 1262/1415 (89%)
EPI3107 A/duck/Ukraine/1/1963 (A/H3N8) segment 6 (NA) 1744.4 0.000000e+00 1261/1415 (89%)
EPI132460 A/duck/Ukraine/1/1963 (A/H3N8) segment 6 (NA) 1738.8 0.000000e+00 1260/1415 (89%)
EPI251642 A/mallard/Netherlands/10/1999 (A/H1N8) segment 6 (NA) 1718.5 0.000000e+00 1214/1353 (89%)
EPI128904 A/duck/Burjatia/652/1988 (A/H3N8) segment 6 (NA) 1672.3 0.000000e+00 1250/1417 (88%)
EPI2999 A/duck/Hong Kong/438/1977 (A/H4N8) segment 6 (NA) 1672.3 0.000000e+00 1248/1415 (88%)
EPI182043 A/common eider/Netherlands/1/2006 (A/H3N8) segment 6 (NA) 1666.8 0.000000e+00 1246/1414 (88%)
EPI336006 A/teal/Chany/444/2009 (A/H8N8) segment 6 (NA) 1661.3 0.000000e+00 1246/1415 (88%)
EPI316502 A/duck/Hubei/126/1985 (A/H7N8) segment 6 (NA) 1661.3 0.000000e+00 1248/1417 (88%)
EPI251715 A/mallard/Sweden/45/2002 (A/H11N8) segment 6 (NA) 1661.3 0.000000e+00 1244/1413 (88%)
EPI398948 A/mallard/Norway/10_779/2009 (A/H3N8) segment 6 (NA) 1655.7 0.000000e+00 1244/1414 (87%)
EPI372503 A/mallard/Ukraine/05842-NAMRU3/2006 (A/H3N8) segment 6 (NA) 1655.7 0.000000e+00 1242/1412 (87%)
EPI339175 A/mallard/Germany-BY/R1353/2010 (A/H6N8) segment 6 (NA) 1655.7 0.000000e+00 1241/1411 (87%)
EPI339174 A/goose/Germany/R1767/2007 (A/H6N8) segment 6 (NA) 1655.7 0.000000e+00 1242/1412 (87%)
EPI316762 A/mallard/Czech Republic/13577-24K/2010 (A/H3N8) segment 6 (NA) 1655.7 0.000000e+00 1241/1411 (87%)
EPI314410 A/mallard/Czech Republic/14516/2007 (A/H3N8) segment 6 (NA) 1655.7 0.000000e+00 1241/1411 (87%)
EPI268303 A/duck/Hunan/3748/2004 (A/H6N8) segment 6 (NA) 1655.7 0.000000e+00 1242/1412 (87%)
EPI397605 A/duck/Germany-NW/R2185/2006 (A/H6N8) segment 6 (NA) 1650.2 0.000000e+00 1245/1416 (87%)
EPI310343 A/duck/Zambia/04/2008 (A/H3N8) segment 6 (NA) 1650.2 0.000000e+00 1242/1413 (87%)
EPI235185 A/Mallard/65112/03 (A/H3N8) segment 6 (NA) 1650.2 0.000000e+00 1242/1413 (87%)
EPI182115 A/mallard/Netherlands/33/2006 (A/H7N8) segment 6 (NA) 1650.2 0.000000e+00 1243/1414 (87%)
EPI182051 A/turnstone/Netherlands/1/2007 (A/H3N8) segment 6 (NA) 1650.2 0.000000e+00 1243/1414 (87%)
EPI268302 A/mallard/Jiangxi/6285/2004 (A/H6N8) segment 6 (NA) 1646.5 0.000000e+00 1240/1411 (87%)
EPI268301 A/mallard/Jiangxi/4408/2005 (A/H6N8) segment 6 (NA) 1646.5 0.000000e+00 1240/1411 (87%)
EPI296538 A/mallard/Netherlands/20/2005 (A/H12N8) segment 6 (NA) 1644.6 0.000000e+00 1241/1413 (87%)
EPI296491 A/common eider/Netherlands2/2006 (A/H4N8) segment 6 (NA) 1644.6 0.000000e+00 1241/1413 (87%)
EPI182083 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 6 (NA) 1644.6 0.000000e+00 1241/1413 (87%)
EPI182075 A/common teal/Netherlands/2/2005 (A/H6N8) segment 6 (NA) 1644.6 0.000000e+00 1241/1413 (87%)
EPI398924 A/common gull/Norway/10_1602/2009 (A/H6N8) segment 6 (NA) 1639.1 0.000000e+00 1240/1413 (87%)
EPI339172 A/mallard/Germany-BE/R663/08 (A/H3N8) segment 6 (NA) 1639.1 0.000000e+00 1240/1413 (87%)
EPI169324 A/Anas platyrhynchos/Belgium/12827/2007 (A/H3N8) segment 6 (NA) 1639.1 0.000000e+00 1240/1413 (87%)
EPI14499 A/duck/Spain/543/2006 (A/H6N8) segment 6 (NA) 1639.1 0.000000e+00 1240/1413 (87%)
EPI408014 A/duck/Chabarovsk/1610/1972 (A/H3N8) segment 6 (NA) 1633.6 0.000000e+00 1239/1413 (87%)
EPI222081 A/gadwall/Altai/1328/2007 (A/H3N8) segment 6 (NA) 1633.6 0.000000e+00 1238/1412 (87%)
EPI222073 A/gadwall/Altai/1326/2007 (A/H3N8) segment 6 (NA) 1633.6 0.000000e+00 1238/1412 (87%)
EPI222065 A/gadwall/Altai/1325/2007 (A/H3N8) segment 6 (NA) 1633.6 0.000000e+00 1238/1412 (87%)
EPI221959 A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 6 (NA) 1633.6 0.000000e+00 1240/1414 (87%)
EPI42316 A/duck/Chabarovsk/1610/1972 (A/H3N8) segment 6 (NA) 1633.6 0.000000e+00 1239/1413 (87%)
EPI13715 A/duck/Norway/1/03 (A/H3N8) segment 6 (NA) 1631.7 0.000000e+00 1237/1412 (87%)
EPI367575 A/mallard/Czech Republic/14333-1K/2011 (A/H3N8) segment 6 (NA) 1628.0 0.000000e+00 1239/1414 (87%)
EPI356301 A/Greater white-fronted goose/Germany-NW/R02/2009 (A/H6N8) segment 6 (NA) 1628.0 0.000000e+00 1238/1413 (87%)
EPI302179 A/Greater White-Fronted Goose/Germany-NW/R02/2009 (A/H6N8) segment 6 (NA) 1628.0 0.000000e+00 1238/1413 (87%)
EPI234646 A/duck/Beijing/40/04 (A/H3N8) segment 6 (NA) 1628.0 0.000000e+00 1239/1414 (87%)
EPI222057 A/gadwall/Altai/1324/2007 (A/H3N8) segment 6 (NA) 1628.0 0.000000e+00 1238/1413 (87%)
EPI184026 A/mallard/Hungary/19616/2007 (A/H3N8) segment 6 (NA) 1628.0 0.000000e+00 1239/1414 (87%)
EPI251736 A/mallard/Sweden/50/2002 (A/H3N8) segment 6 (NA) 1622.5 0.000000e+00 1215/1380 (88%)
EPI221967 A/environment/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 6 (NA) 1622.5 0.000000e+00 1238/1414 (87%)
EPI221951 A/water/Dongting Lake/Hunan/3-9/2007 (A/H10N8) segment 6 (NA) 1622.5 0.000000e+00 1238/1414 (87%)
EPI190374 A/mallard/Netherlands/17/2007 (A/H11N8) segment 6 (NA) 1622.5 0.000000e+00 1237/1413 (87%)
EPI181955 A/mallard/Netherlands/3/2005 (A/H3N8) segment 6 (NA) 1622.5 0.000000e+00 1236/1412 (87%)
EPI174847 A/duck/Denmark/75-65472-P34/2003 (A/H3N8) segment 6 (NA) 1622.5 0.000000e+00 1237/1413 (87%)
EPI105959 A/Bewick's swan/Netherlands/2/2005 (A/H6N8) segment 6 (NA) 1622.5 0.000000e+00 1238/1414 (87%)
EPI14495 A/duck/Spain/539/2006 (A/H6N8) segment 6 (NA) 1622.5 0.000000e+00 1237/1413 (87%)
EPI2277 A/Duck/Hokkaido/8/80 (A/H3N8) segment 6 (NA) 1622.5 0.000000e+00 1238/1414 (87%)
EPI345774 A/duck/Eastern China/50/2002 (A/H6N8) segment 6 (NA) 1616.9 0.000000e+00 1237/1414 (87%)
EPI251795 A/mallard/Sweden/7/2003 (A/H10N8) segment 6 (NA) 1616.9 0.000000e+00 1167/1311 (89%)

Author:  niman [ Wed Jan 07, 2015 2:15 pm ]
Post subject:  Re: H5N8 Healthy Wigeon Sequence from Sakha Russia

EPI553471 A/wigeon/Sakha/1/2014 (A/H5N8) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%)
EPI552750 A/turkey/Germany/R2474-L00899/2014 (A/H5N8) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%)
EPI548628 A/chicken/Netherlands/14015531/2014 (A/H5N8) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%)
EPI548428 A/turkey/Germany-MV/R2472/2014 (A/H5N8) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%)
EPI547685 A/Chicken/Netherlands/14015526/2014 (A/H5N8) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%)
EPI547677 A/duck/England/36254/14 (A/H5N8) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%)
EPI542634 A/mallard/Korea/W452/2014 (A/H5N8) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%)
EPI509757 A/baikal teal/Korea/Donglim3/2014 (A/H5N8) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%)
EPI509712 A/broiler duck/Korea/Buan2/2014 (A/H5N8) segment 8 (NS) 1543.1 0.000000e+00 837/838 (99%)
EPI553366 A/environment/Kagoshima/KU-ngr-H/2014 (A/H5N8) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%)
EPI548497 A/duck/Chiba/26-372-61/2014 (A/H5N8) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%)
EPI548489 A/duck/Chiba/26-372-48/2014 (A/H5N8) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%)
EPI553212 A/crane/Kagoshima/KU1/2014 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%)
EPI517165 A/Chicken/Kumamoto/1-7/2014 (A/H5N8) segment 8 (NS) 1532.0 0.000000e+00 835/838 (99%)
EPI553347 A/chicken/Miyazaki/7/2014 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI542998 A/duck/Beijing/FS01/2013 (A/H5N8) segment 8 (NS) 1515.4 0.000000e+00 830/835 (99%)
EPI543014 A/duck/Beijing/CT01/2014 (A/H5N8) segment 8 (NS) 1509.8 0.000000e+00 829/835 (99%)
EPI543006 A/duck/Beijing/FS01/2014 (A/H5N8) segment 8 (NS) 1504.3 0.000000e+00 828/835 (99%)
EPI553183 A/turkey/Italy/14VIR7898-10/2014 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 814/816 (99%)
EPI552780 A/chicken/Netherlands/emc-3/2014 (A/H5N8) segment 8 (NS) 1498.8 0.000000e+00 813/814 (99%)
EPI431452 A/duck/Hebei/2/2011 (A/H5N2) segment 8 (NS) 1487.7 0.000000e+00 822/830 (99%)
EPI403396 A/duck/Eastern China/1111/2011 (A/H5N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
EPI414242 A/duck/Jiangsu/1-15/2011 (A/H4N2) segment 8 (NS) 1482.1 0.000000e+00 826/838 (98%)
EPI552764 A/eurasian wigeon/Netherlands/emc-1/2014 (A/H5N8) segment 8 (NS) 1478.4 0.000000e+00 800/800 (100%)
EPI403397 A/goose/Eastern China/1112/2011 (A/H5N2) segment 8 (NS) 1476.6 0.000000e+00 826/839 (98%)
EPI475583 A/wild duck/Shandong/628/2011 (A/H5N1) segment 8 (NS) 1443.4 0.000000e+00 819/838 (97%)
EPI431460 A/duck/Hebei/3/2011 (A/H5N2) segment 8 (NS) 1434.1 0.000000e+00 814/832 (97%)
EPI399964 A/duck/Jiangsu/m234/2012 (A/H5N2) segment 8 (NS) 1423.0 0.000000e+00 814/836 (97%)
EPI552772 A/eurasian wigeon/Netherlands/emc-2/2014 (A/H5N8) segment 8 (NS) 1410.1 0.000000e+00 769/772 (99%)
EPI296628 A/mallard/Sweden/95/2005 (A/H7N7) segment 8 (NS) 1365.8 0.000000e+00 805/838 (96%)
EPI130868 A/duck/Nanchang/1944/1993 (A/H7N4) segment 8 (NS) 1365.8 0.000000e+00 805/838 (96%)
EPI89129 A/duck/Nanchang/1904/1992 (A/H7N1) segment 8 (NS) 1365.8 0.000000e+00 805/838 (96%)
EPI485927 A/mallard/Sweden/17/2002 (A/H10N4) segment 8 (NS) 1360.3 0.000000e+00 804/838 (95%)
EPI485684 A/mallard/Sweden/64/2003 (A/H7N7) segment 8 (NS) 1360.3 0.000000e+00 804/838 (95%)
EPI377644 A/mallard/Netherlands/14/2001 (A/H2N3) segment 8 (NS) 1360.3 0.000000e+00 804/838 (95%)
EPI251862 A/whitefronted goose/Netherlands/2/1999 (A/H6N2) segment 8 (NS) 1360.3 0.000000e+00 804/838 (95%)
EPI251854 A/whitefronted goose/Netherlands/1/1999 (A/H6N1) segment 8 (NS) 1360.3 0.000000e+00 804/838 (95%)
EPI251704 A/mallard/Sweden/4/2002 (A/H10N2) segment 8 (NS) 1360.3 0.000000e+00 805/839 (95%)
EPI251621 A/greylag goose/Netherlands/4/1999 (A/H6N1) segment 8 (NS) 1360.3 0.000000e+00 804/838 (95%)
EPI182085 A/black-headed gull/Netherlands/1/2005 (A/H6N8) segment 8 (NS) 1360.3 0.000000e+00 804/838 (95%)
EPI105878 A/duck/Primorie/3691/02 (A/H12N2) segment 8 (NS) 1360.3 0.000000e+00 798/829 (96%)
EPI514909 A/mallard/Sweden/146/2002 (A/H4N6) segment 8 (NS) 1354.7 0.000000e+00 804/839 (95%)
EPI514749 A/mallard/Sweden/4514/2004 (A/H4N6) segment 8 (NS) 1354.7 0.000000e+00 803/838 (95%)
EPI514157 A/mallard/Sweden/58359/2006 (A/H0) segment 8 (NS) 1354.7 0.000000e+00 803/838 (95%)
EPI447398 A/mallard/Italy/3401/2005 (A/H5N1) segment 8 (NS) 1354.7 0.000000e+00 803/838 (95%)
EPI447396 A/mallard/Italy/3401/2005 (A/H5N1) segment 8 (NS) 1354.7 0.000000e+00 803/838 (95%)
EPI327321 A/mallard/Italy/3401/2005 (A/H5N1) segment 8 (NS) 1354.7 0.000000e+00 803/838 (95%)
EPI60376 A/mallard/Italy/3401/2005 (A/H5N1) segment 8 (NS) 1354.7 0.000000e+00 803/838 (95%)
EPI514916 A/mallard/Sweden/274/2002 (A/H4N2) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI514892 A/mallard/Sweden/1616/2002 (A/H4N6) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI514885 A/mallard/Sweden/1544/2002 (A/H4N6) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI514833 A/mallard/Sweden/1705/2002 (A/H4N6) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI514826 A/mallard/Sweden/1677/2002 (A/H4N6) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI514819 A/mallard/Sweden/1665/2002 (A/H4N6) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI514812 A/mallard/Sweden/1656/2002 (A/H4N6) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI514222 A/mallard/Sweden/52484/2006 (A/H4N6) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI485934 A/mallard/Sweden/39/2002 (A/H5N3) segment 8 (NS) 1349.2 0.000000e+00 803/839 (95%)
EPI372420 A/teal/Egypt/01207-NAMRU3/2007 (A/H10N7) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI327035 A/duck/Korea/JS49/2004 (A/H3N2) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI296525 A/mallard/Netherlands/02/2000 (A/H10N7) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI272784 A/mallard/PT/35910-2/2006 (A/H4N6) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI268644 A/wild duck/Shantou/311/2001 (A/H6N9) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI268623 A/mallard/Jiangxi/8341/2004 (A/H6N5) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI268610 A/duck/Shantou/1090/2001 (A/H6N2) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI251804 A/mallard/Sweden/8/2003 (A/H8N4) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI251738 A/mallard/Sweden/50/2002 (A/H3N8) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI238134 A/mallard/Netherlands/02/2000 (A/H10N7) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI224485 A/mallard/Netherlands/2/2005 (A/H5N2) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI174829 A/duck/Denmark/74-68425/2002 (A/H1N3) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI102384 A/duck/Taiwan/WB459/04 (A/H6N5) segment 8 (NS) 1349.2 0.000000e+00 802/838 (95%)
EPI21460 A/mallard/Italy/43/2001 (A/H7N3) segment 8 (NS) 1349.2 0.000000e+00 803/839 (95%)
EPI21458 A/mallard/Italy/33/01 (A/H7N3) segment 8 (NS) 1349.2 0.000000e+00 803/839 (95%)
EPI514930 A/mallard/Sweden/337/2002 (A/H4N6) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI514923 A/mallard/Sweden/310/2002 (A/H4N6) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI514878 A/mallard/Sweden/1195/2002 (A/H4N2) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI514871 A/mallard/Sweden/1194/2002 (A/H4N6) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI514857 A/mallard/Sweden/814/2002 (A/H4N9) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI485744 A/mallard/Sweden/49/2002 (A/H5N9) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI485572 A/mallard/Sweden/9/2003 (A/H2N5) segment 8 (NS) 1343.6 0.000000e+00 802/839 (95%)
EPI470704 A/wild waterfowl/Hong Kong/MPJ1815/2010 (A/H11N9) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI470665 A/eurasian wigeon/Hong Kong/MPK653/2009 (A/H11N9) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI470656 A/eurasian wigeon/Hong Kong/MPK655/2009 (A/H11N9) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI447410 A/mallard/Italy/3401/2005 (A/H5N1) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI447397 A/mallard/Italy/3401/2005 (A/H5N1) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI377922 A/mallard/Sweden/103/2005 (A/H2N9) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI377840 A/mallard/Sweden/9/2003 (A/H2N7) segment 8 (NS) 1343.6 0.000000e+00 802/839 (95%)
EPI377770 A/mallard/Sweden/30/2002 (A/H2N5) segment 8 (NS) 1343.6 0.000000e+00 802/839 (95%)
EPI377660 A/mallard/Sweden/6/2002 (A/H2N3) segment 8 (NS) 1343.6 0.000000e+00 802/839 (95%)
EPI377572 A/mallard/Sweden/88/2005 (A/H0) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI363531 A/duck/Guizhou/1426/2006 (A/H6N1) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI363523 A/duck/Guizhou/1084/2006 (A/H6N2) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI327037 A/environment/Korea/CSM08/2004 (A/H3N3) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI268622 A/mallard/Jiangxi/8346/2004 (A/H6N5) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI268526 A/mallard/Jiangxi/8264/2004 (A/H6N2) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI268502 A/duck/Hunan/491/2005 (A/H6N2) segment 8 (NS) 1343.6 0.000000e+00 802/839 (95%)
EPI268483 A/mallard/Jiangxi/227/2003 (A/H6N1) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI251773 A/mallard/Sweden/6/2002 (A/H2N3) segment 8 (NS) 1343.6 0.000000e+00 802/839 (95%)
EPI251753 A/mallard/Sweden/55/2002 (A/H11N2) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI243121 A/mallard/Denmark/64650/03 (A/H5N7) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)
EPI242039 A/R(duck/Mongolia/54/01-duck/Mongolia/47/01) (A/H5N1) segment 8 (NS) 1343.6 0.000000e+00 801/838 (95%)

Author:  niman [ Fri Mar 20, 2015 10:00 am ]
Post subject:  Re: H5N8 Healthy Wigeon Sequence from Sakha Russia

Highly pathogenic avian influenza,
Russia

Information received on 20/03/2015 from Dr Evgeny Nepoklonov, Deputy Head, Federal Service for Veterinary and Phytosanitary Surveillance, Ministry of Agriculture, Moscow, Russia

Report type Follow-up report No. 1 (Final report)
Date of start of the event 25/09/2014
Date of pre-confirmation of the event 11/12/2014
Report date 20/03/2015
Date submitted to OIE 20/03/2015
Date event resolved 03/10/2014
Reason for notification New strain of a listed disease
Manifestation of disease Sub-clinical infection
Causal agent Highly pathogenic avian influenza virus
Serotype H5N8
Nature of diagnosis Laboratory (basic), Laboratory (advanced)
This event pertains to a defined zone within the country
Related reports Immediate notification (25/12/2014)
Follow-up report No. 1 (20/03/2015)
Outbreaks There are no new outbreaks in this report
Epidemiology
Source of the outbreak(s) or origin of infection
seasonal migration of wild birds
Control measures
Measures applied
Control of wildlife reservoirs
Screening
No vaccination
No treatment of affected animals
Measures to be applied
No other measures
Diagnostic test results
Laboratory name and type Species Test Test date Result
Federal Scientific Centre of Virology and Biotechnology "Vector", Novosibirsk (National laboratory) Eurasian Wigeon virus isolation 11/12/2014 Positive
Federal Scientific Centre of Virology and Biotechnology "Vector", Novosibirsk (National laboratory) Eurasian Wigeon polymerase chain reaction (PCR) 11/12/2014 Positive
Future Reporting
The event is resolved. No more reports will be submitted.
http://www.oie.int/wahis_2/public/wahid ... rtid=17391

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