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PostPosted: Tue Aug 26, 2014 11:33 am 
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Posts: 56044
Location: Pittsburgh, PA USA
The CDC has released the full sequence (at GISAID) of the hospitalized case in Ohio, A/Ohio/02/2014 . The new constellation has H1N1pdo09 NP and MP.

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PostPosted: Tue Aug 26, 2014 11:34 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
Isolate name:

A/Ohio/02/2014

Isolate ID:

EPI_ISL_165317
Passage details/history:

Original
Type:

A / H3N2
Lineage:



Sample information

Collection date:

2014-08-05
Host

Human
Additional host information:


Zip code:


Patient status:


Last vaccinated:


In-vivo pathogenicity test:


Location:

United States / Ohio
Additional location information:


Patient age:


Gender:


Outbreak:


Treatment:


Specimen source:




Institute information

Originating lab:
Ohio Department of Health Laboratories
Sample ID given by the sample provider:

2014004564 ORIGINAL
Address:
Ohio Department of Health Laboratories
8995 East Main St Building 22
Reynoldsburg, 43068
United States


Submitting lab:
Centers for Disease Control and Prevention
Sample ID given by the submitting laboratory:

2014767765
Authors:

Address:
Centers for Disease Control and Prevention
WHO Collaborating Center for Surveillance, Epidemiology and Control of Influenza, Influenza Division
1600 Clifton Road, N.E.
Atlanta, GA 30333
United States


Publication
Publication


In vivo antiviral resistance

Phenotype Genotype Unspecified Antiviral resistance tested by experimental procedures
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown

Antiviral resistance tested by sequence prediction
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown
Antiviral resistance tested by unknown method
Adamantanes:

Unknown
Oseltamivir:

Unknown
Zanamivir:

Unknown
Peramivir:

Unknown
Other:

Unknown

Additional information
Antigenic characterization:


Note:
Human case of H3N2v with NP and M genes from H1N1pdm09

Sequence

segment identifier length accession # INSDC Sequence
PB2 2014767765_257375_v1_1 2280 EPI539156
PB1 2014767765_257375_v1_2 2274 EPI539157
PA 2014767765_257375_v1_3 2079 EPI539158
HA 2014767765_257375_v1_4 1701 EPI539159
NP 2014767765_257375_v1_5 1497 EPI539160
NA 2014767765_257375_v1_6 1394 EPI539161
MP 2014767765_257375_v1_7 971 EPI539162
NS 2014767765_257375_v1_8 838 EPI539163

Submitter information

Submitter:

Garten, Rebecca
Submission Date:

2014-08-22
Last modifier:

Garten, Rebecca
Last modified:

2014-08-26
Address:
Centers for Disease Control and Prevention
WHO Collaborating Center for Surveillance, Epidemiology and Control of Influenza, Influenza Division
1600 Clifton Road, N.E.
Atlanta, GA 30333
United States

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PostPosted: Tue Aug 26, 2014 11:45 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI533919 A/swine/Iowa/A01481221/2014 (A/H3N2) segment 4 (HA) 3081.3 0.000000e+00 1691/1702 (99%)
EPI499641 A/swine/Iowa/A01290671/2013 (A/H3N2) segment 4 (HA) 3077.6 0.000000e+00 1689/1701 (99%)
EPI472192 A/swine/Iowa/A01432826/2013 (A/H3N2) segment 4 (HA) 3077.6 0.000000e+00 1689/1701 (99%)
EPI391396 A/swine/Iowa/A01203104/2011 (A/H3N2) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%)
EPI390890 A/swine/Iowa/A01243311/2012 (A/H3N2) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%)
EPI390887 A/swine/Iowa/A01203459/2012 (A/H3N2) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%)
EPI383557 A/swine/Minnesota/A01203412/2012 (A/H0) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%)
EPI390827 A/swine/Iowa/A01203304/2012 (A/H3N2) segment 4 (HA) 3048.1 0.000000e+00 1684/1701 (99%)
EPI383524 A/swine/Iowa/A01203492/2012 (A/H3N2) segment 4 (HA) 3048.1 0.000000e+00 1684/1701 (99%)
EPI416888 A/swine/Minnesota/A01442410/2012 (A/H3N2) segment 4 (HA) 3042.6 0.000000e+00 1683/1701 (98%)
EPI463694 A/swine/Illinois/A01271617/2012 (A/H3N2) segment 4 (HA) 3031.5 0.000000e+00 1681/1701 (98%)
EPI408382 A/swine/Illinois/A01271623/2012 (A/H3N2) segment 4 (HA) 3031.5 0.000000e+00 1681/1701 (98%)
EPI390886 A/swine/Iowa/A01203463/2012 (A/H3N2) segment 4 (HA) 3029.6 0.000000e+00 1680/1701 (98%)
EPI414162 A/swine/Iowa/A01203891/2012 (A/H0) segment 4 (HA) 3020.4 0.000000e+00 1679/1701 (98%)
EPI406582 A/swine/Iowa/A01203954/2012 (A/H3N2) segment 4 (HA) 3020.4 0.000000e+00 1679/1701 (98%)
EPI406555 A/swine/Iowa/A01203872/2012 (A/H3N2) segment 4 (HA) 3020.4 0.000000e+00 1679/1701 (98%)
EPI399408 A/swine/Minnesota/A01300160/2012 (A/H3N2) segment 4 (HA) 3020.4 0.000000e+00 1679/1701 (98%)
EPI406622 A/swine/Minnesota/A01271001/2012 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%)
EPI406611 A/swine/Minnesota/A01271014/2012 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%)
EPI406573 A/swine/Iowa/A01203943/2012 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%)
EPI406518 A/swine/Iowa/A01432077/2012 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%)
EPI399453 A/swine/Iowa/A01300195/2012 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%)
EPI399438 A/swine/Iowa/A01300194/2012 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%)
EPI414034 A/swine/Iowa/A01279512/2012 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1678/1702 (98%)
EPI408379 A/swine/Minnesota/A01271731/2012 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1677/1701 (98%)
EPI383523 A/swine/Iowa/A01203482/2012 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1677/1701 (98%)
EPI424012 A/swine/Minnesota/A01442898/2012 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%)
EPI406527 A/swine/Iowa/A01432072/2012 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%)
EPI398513 A/swine/Minnesota/A01301665/2012 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%)
EPI393232 A/swine/Iowa/A01203612/2012 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%)
EPI467460 A/swine/Minnesota/A01432932/2013 (A/H3N2) segment 4 (HA) 3000.1 0.000000e+00 1675/1701 (98%)
EPI406462 A/swine/Minnesota/A01271227/2012 (A/H3N2) segment 4 (HA) 3000.1 0.000000e+00 1675/1701 (98%)
EPI459624 A/swine/Iowa/A01432680/2013 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%)
EPI399515 A/swine/Minnesota/A01240792/2012 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%)
EPI378028 A/swine/Minnesota/4/2012 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%)
EPI453591 A/swine/Minnesota/A01379746/2013 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%)
EPI433282 A/swine/Minnesota/A01280543/2013 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%)
EPI416882 A/swine/Illinois/A01244402/2012 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%)
EPI408385 A/swine/Minnesota/A01271443/2012 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1675/1702 (98%)
EPI406561 A/swine/Iowa/A01203936/2012 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%)
EPI391412 A/swine/Iowa/A01203248/2012 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1675/1702 (98%)
EPI439859 A/swine/Minnesota/A01432462/2013 (A/H3N2) segment 4 (HA) 2989.0 0.000000e+00 1673/1701 (98%)
EPI459630 A/swine/Iowa/A01432731/2013 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%)
EPI439850 A/swine/Minnesota/A01432433/2013 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%)
EPI492366 A/swine/Minnesota/A01392044/2013 (A/H3N2) segment 4 (HA) 2981.6 0.000000e+00 1672/1701 (98%)
EPI416921 A/swine/Minnesota/A01442411/2012 (A/H3N2) segment 4 (HA) 2981.6 0.000000e+00 1672/1701 (98%)
EPI446473 A/swine/Minnesota/A01432544/2013 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1671/1701 (98%)
EPI508878 A/swine/Minnesota/A01409771/2014 (A/H3N2) segment 4 (HA) 2976.1 0.000000e+00 1671/1701 (98%)
EPI487945 A/swine/Minnesota/A01392515/2013 (A/H3N2) segment 4 (HA) 2976.1 0.000000e+00 1671/1701 (98%)
EPI399450 A/swine/Minnesota/A01300992/2012 (A/H3N2) segment 4 (HA) 2976.1 0.000000e+00 1671/1701 (98%)
EPI508840 A/swine/Minnesota/A01410096/2014 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1670/1701 (98%)
EPI463726 A/swine/Iowa/A01432770/2013 (A/H3N2) segment 4 (HA) 2970.5 0.000000e+00 1670/1701 (98%)
EPI406537 A/swine/Minnesota/A01267989/2012 (A/H3N2) segment 4 (HA) 2970.5 0.000000e+00 1670/1701 (98%)
EPI502646 A/swine/South Dakota/A01366205/2013 (A/H3N2) segment 4 (HA) 2965.0 0.000000e+00 1669/1701 (98%)
EPI399294 A/swine/Minnesota/A01327922/2012 (A/H3N2) segment 4 (HA) 2965.0 0.000000e+00 1669/1701 (98%)
EPI399147 A/swine/Minnesota/A01327921/2012 (A/H3N2) segment 4 (HA) 2965.0 0.000000e+00 1669/1701 (98%)
EPI383529 A/swine/Minnesota/A01203517/2012 (A/H3N2) segment 4 (HA) 2965.0 0.000000e+00 1669/1701 (98%)
EPI484465 A/swine/Iowa/A01290414/2013 (A/H3N2) segment 4 (HA) 2953.9 0.000000e+00 1668/1702 (98%)
EPI467894 A/swine/Iowa/A01398028/2013 (A/H3N2) segment 4 (HA) 2953.9 0.000000e+00 1668/1702 (98%)
EPI401102 A/swine/Minnesota/A01301617/2012 (A/H3N2) segment 4 (HA) 2953.9 0.000000e+00 1668/1702 (98%)
EPI504891 A/swine/Iowa/A01290933/2013 (A/H3N2) segment 4 (HA) 2950.2 0.000000e+00 1666/1701 (97%)
EPI499897 A/swine/Minnesota/A01366004/2013 (A/H3N2) segment 4 (HA) 2948.4 0.000000e+00 1667/1702 (97%)
EPI472146 A/swine/Minnesota/A01397282/2013 (A/H3N2) segment 4 (HA) 2948.4 0.000000e+00 1666/1701 (97%)
EPI408401 A/swine/South Dakota/A01279279/2012 (A/H3N2) segment 4 (HA) 2948.4 0.000000e+00 1666/1701 (97%)
EPI538920 A/swine/Minnesota/A01501738/2014 (A/H3N2) segment 4 (HA) 2944.7 0.000000e+00 1665/1701 (97%)
EPI324852 A/swine/Minnesota/A01049346/2010 (A/H3N2) segment 4 (HA) 2937.3 0.000000e+00 1664/1701 (97%)
EPI399465 A/swine/Minnesota/A01300213/2012 (A/H3N2) segment 4 (HA) 2909.6 0.000000e+00 1659/1701 (97%)
EPI399351 A/swine/Minnesota/A01328451/2012 (A/H3N2) segment 4 (HA) 2848.7 0.000000e+00 1649/1702 (96%)
EPI399204 A/swine/Minnesota/A01125992/2012 (A/H3N2) segment 4 (HA) 2843.1 0.000000e+00 1648/1702 (96%)
EPI399030 A/swine/Minnesota/A01125993/2012 (A/H3N2) segment 4 (HA) 2843.1 0.000000e+00 1648/1702 (96%)
EPI489259 A/swine/Manitoba/02182/2008 (A/H3N2) segment 4 (HA) 2772.9 0.000000e+00 1635/1701 (96%)
EPI490235 A/swine/Manitoba/00446/2005 (A/H3N2) segment 4 (HA) 2760.0 0.000000e+00 1633/1702 (95%)
EPI489252 A/swine/Manitoba/01782/2007 (A/H3N2) segment 4 (HA) 2760.0 0.000000e+00 1634/1703 (95%)
EPI489182 A/swine/Manitoba/00446/2005 (A/H3N2) segment 4 (HA) 2760.0 0.000000e+00 1633/1702 (95%)
EPI489203 A/swine/Alberta/00805/2005 (A/H3N2) segment 4 (HA) 2754.5 0.000000e+00 1632/1702 (95%)
EPI489196 A/swine/Alberta/SG1405/2005 (A/H3N2) segment 4 (HA) 2754.5 0.000000e+00 1632/1702 (95%)
EPI489189 A/swine/British Columbia/00633/2005 (A/H3N2) segment 4 (HA) 2754.5 0.000000e+00 1633/1703 (95%)
EPI488564 A/swine/Minnesota/SG1238/2005 (A/H3N2) segment 4 (HA) 2754.5 0.000000e+00 1632/1702 (95%)
EPI488557 A/swine/Minnesota/SG1236/2005 (A/H3N2) segment 4 (HA) 2754.5 0.000000e+00 1632/1702 (95%)
EPI337441 A/swine/Minnesota/00611/2005 (A/H3N2) segment 4 (HA) 2754.5 0.000000e+00 1632/1702 (95%)
EPI103199 A/swine/Ontario/33853/2005 (A/H3N2) segment 4 (HA) 2748.9 0.000000e+00 1631/1702 (95%)
EPI103127 A/Ontario/RV1273/2005 (A/H3N2) segment 4 (HA) 2748.9 0.000000e+00 1631/1702 (95%)
EPI490416 A/swine/Iowa/SG1469/2004 (A/H3N2) segment 4 (HA) 2743.4 0.000000e+00 1630/1702 (95%)
EPI457162 A/swine/Nebraska/9330/2006 (A/H3N2) segment 4 (HA) 2743.4 0.000000e+00 1630/1702 (95%)
EPI314335 A/turkey/BC/1529-3/2005 (A/H3N2) segment 4 (HA) 2743.4 0.000000e+00 1631/1703 (95%)
EPI289638 A/swine/Minnesota/1300/2007 (A/H3N2) segment 4 (HA) 2743.4 0.000000e+00 1630/1702 (95%)
EPI314679 A/swine/QC/414/2009 (A/H3N2) segment 4 (HA) 2739.7 0.000000e+00 1630/1702 (95%)
EPI490809 A/swine/Quebec/01002/2006 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1629/1702 (95%)
EPI490805 A/swine/Quebec/01000/2006 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1629/1702 (95%)
EPI489224 A/swine/Manitoba/01179/2006 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1629/1702 (95%)
EPI384268 A/swine/Minnesota/A01201424/2010 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1626/1697 (95%)
EPI229372 A/turkey/OH/313053/2004 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1629/1702 (95%)
EPI158876 A/turkey/MN/366767/2005 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1629/1702 (95%)
EPI103145 A/swine/Alberta/14722/2005 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1629/1702 (95%)
EPI490853 A/swine/North Carolina/00950/2006 (A/H3N2) segment 4 (HA) 2732.3 0.000000e+00 1630/1704 (95%)
EPI490381 A/swine/North Carolina/SG1464/2004 (A/H3N2) segment 4 (HA) 2732.3 0.000000e+00 1628/1702 (95%)
EPI489210 A/swine/Quebec/01001/2006 (A/H3N2) segment 4 (HA) 2732.3 0.000000e+00 1628/1702 (95%)
EPI488550 A/swine/North Carolina/SG1230/2005 (A/H3N2) segment 4 (HA) 2732.3 0.000000e+00 1628/1702 (95%)
EPI103181 A/swine/Manitoba/12707/2005 (A/H3N2) segment 4 (HA) 2732.3 0.000000e+00 1628/1702 (95%)
EPI101389 A/turkey/Ohio/313053/04 (A/H3N2) segment 4 (HA) 2732.3 0.000000e+00 1628/1702 (95%)

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PostPosted: Tue Aug 26, 2014 11:47 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
niman wrote:
EPI533919 A/swine/Iowa/A01481221/2014 (A/H3N2) segment 4 (HA) 3081.3 0.000000e+00 1691/1702 (99%)
EPI499641 A/swine/Iowa/A01290671/2013 (A/H3N2) segment 4 (HA) 3077.6 0.000000e+00 1689/1701 (99%)
EPI472192 A/swine/Iowa/A01432826/2013 (A/H3N2) segment 4 (HA) 3077.6 0.000000e+00 1689/1701 (99%)
EPI391396 A/swine/Iowa/A01203104/2011 (A/H3N2) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%)
EPI390890 A/swine/Iowa/A01243311/2012 (A/H3N2) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%)
EPI390887 A/swine/Iowa/A01203459/2012 (A/H3N2) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%)
EPI383557 A/swine/Minnesota/A01203412/2012 (A/H0) segment 4 (HA) 3053.6 0.000000e+00 1685/1701 (99%)
EPI390827 A/swine/Iowa/A01203304/2012 (A/H3N2) segment 4 (HA) 3048.1 0.000000e+00 1684/1701 (99%)
EPI383524 A/swine/Iowa/A01203492/2012 (A/H3N2) segment 4 (HA) 3048.1 0.000000e+00 1684/1701 (99%)
EPI416888 A/swine/Minnesota/A01442410/2012 (A/H3N2) segment 4 (HA) 3042.6 0.000000e+00 1683/1701 (98%)
EPI463694 A/swine/Illinois/A01271617/2012 (A/H3N2) segment 4 (HA) 3031.5 0.000000e+00 1681/1701 (98%)
EPI408382 A/swine/Illinois/A01271623/2012 (A/H3N2) segment 4 (HA) 3031.5 0.000000e+00 1681/1701 (98%)
EPI390886 A/swine/Iowa/A01203463/2012 (A/H3N2) segment 4 (HA) 3029.6 0.000000e+00 1680/1701 (98%)
EPI414162 A/swine/Iowa/A01203891/2012 (A/H0) segment 4 (HA) 3020.4 0.000000e+00 1679/1701 (98%)
EPI406582 A/swine/Iowa/A01203954/2012 (A/H3N2) segment 4 (HA) 3020.4 0.000000e+00 1679/1701 (98%)
EPI406555 A/swine/Iowa/A01203872/2012 (A/H3N2) segment 4 (HA) 3020.4 0.000000e+00 1679/1701 (98%)
EPI399408 A/swine/Minnesota/A01300160/2012 (A/H3N2) segment 4 (HA) 3020.4 0.000000e+00 1679/1701 (98%)
EPI406622 A/swine/Minnesota/A01271001/2012 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%)
EPI406611 A/swine/Minnesota/A01271014/2012 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%)
EPI406573 A/swine/Iowa/A01203943/2012 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%)
EPI406518 A/swine/Iowa/A01432077/2012 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%)
EPI399453 A/swine/Iowa/A01300195/2012 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%)
EPI399438 A/swine/Iowa/A01300194/2012 (A/H3N2) segment 4 (HA) 3014.9 0.000000e+00 1678/1701 (98%)
EPI414034 A/swine/Iowa/A01279512/2012 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1678/1702 (98%)
EPI408379 A/swine/Minnesota/A01271731/2012 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1677/1701 (98%)
EPI383523 A/swine/Iowa/A01203482/2012 (A/H3N2) segment 4 (HA) 3009.3 0.000000e+00 1677/1701 (98%)
EPI424012 A/swine/Minnesota/A01442898/2012 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%)
EPI406527 A/swine/Iowa/A01432072/2012 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%)
EPI398513 A/swine/Minnesota/A01301665/2012 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%)
EPI393232 A/swine/Iowa/A01203612/2012 (A/H3N2) segment 4 (HA) 3003.8 0.000000e+00 1676/1701 (98%)
EPI467460 A/swine/Minnesota/A01432932/2013 (A/H3N2) segment 4 (HA) 3000.1 0.000000e+00 1675/1701 (98%)
EPI406462 A/swine/Minnesota/A01271227/2012 (A/H3N2) segment 4 (HA) 3000.1 0.000000e+00 1675/1701 (98%)
EPI459624 A/swine/Iowa/A01432680/2013 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%)
EPI399515 A/swine/Minnesota/A01240792/2012 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%)
EPI378028 A/swine/Minnesota/4/2012 (A/H3N2) segment 4 (HA) 2998.2 0.000000e+00 1675/1701 (98%)
EPI453591 A/swine/Minnesota/A01379746/2013 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%)
EPI433282 A/swine/Minnesota/A01280543/2013 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%)
EPI416882 A/swine/Illinois/A01244402/2012 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%)
EPI408385 A/swine/Minnesota/A01271443/2012 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1675/1702 (98%)
EPI406561 A/swine/Iowa/A01203936/2012 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1674/1701 (98%)
EPI391412 A/swine/Iowa/A01203248/2012 (A/H3N2) segment 4 (HA) 2992.7 0.000000e+00 1675/1702 (98%)
EPI439859 A/swine/Minnesota/A01432462/2013 (A/H3N2) segment 4 (HA) 2989.0 0.000000e+00 1673/1701 (98%)
EPI459630 A/swine/Iowa/A01432731/2013 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%)
EPI439850 A/swine/Minnesota/A01432433/2013 (A/H3N2) segment 4 (HA) 2987.2 0.000000e+00 1673/1701 (98%)
EPI492366 A/swine/Minnesota/A01392044/2013 (A/H3N2) segment 4 (HA) 2981.6 0.000000e+00 1672/1701 (98%)
EPI416921 A/swine/Minnesota/A01442411/2012 (A/H3N2) segment 4 (HA) 2981.6 0.000000e+00 1672/1701 (98%)
EPI446473 A/swine/Minnesota/A01432544/2013 (A/H3N2) segment 4 (HA) 2977.9 0.000000e+00 1671/1701 (98%)
EPI508878 A/swine/Minnesota/A01409771/2014 (A/H3N2) segment 4 (HA) 2976.1 0.000000e+00 1671/1701 (98%)
EPI487945 A/swine/Minnesota/A01392515/2013 (A/H3N2) segment 4 (HA) 2976.1 0.000000e+00 1671/1701 (98%)
EPI399450 A/swine/Minnesota/A01300992/2012 (A/H3N2) segment 4 (HA) 2976.1 0.000000e+00 1671/1701 (98%)
EPI508840 A/swine/Minnesota/A01410096/2014 (A/H3N2) segment 4 (HA) 2972.4 0.000000e+00 1670/1701 (98%)
EPI463726 A/swine/Iowa/A01432770/2013 (A/H3N2) segment 4 (HA) 2970.5 0.000000e+00 1670/1701 (98%)
EPI406537 A/swine/Minnesota/A01267989/2012 (A/H3N2) segment 4 (HA) 2970.5 0.000000e+00 1670/1701 (98%)
EPI502646 A/swine/South Dakota/A01366205/2013 (A/H3N2) segment 4 (HA) 2965.0 0.000000e+00 1669/1701 (98%)
EPI399294 A/swine/Minnesota/A01327922/2012 (A/H3N2) segment 4 (HA) 2965.0 0.000000e+00 1669/1701 (98%)
EPI399147 A/swine/Minnesota/A01327921/2012 (A/H3N2) segment 4 (HA) 2965.0 0.000000e+00 1669/1701 (98%)
EPI383529 A/swine/Minnesota/A01203517/2012 (A/H3N2) segment 4 (HA) 2965.0 0.000000e+00 1669/1701 (98%)
EPI484465 A/swine/Iowa/A01290414/2013 (A/H3N2) segment 4 (HA) 2953.9 0.000000e+00 1668/1702 (98%)
EPI467894 A/swine/Iowa/A01398028/2013 (A/H3N2) segment 4 (HA) 2953.9 0.000000e+00 1668/1702 (98%)
EPI401102 A/swine/Minnesota/A01301617/2012 (A/H3N2) segment 4 (HA) 2953.9 0.000000e+00 1668/1702 (98%)
EPI504891 A/swine/Iowa/A01290933/2013 (A/H3N2) segment 4 (HA) 2950.2 0.000000e+00 1666/1701 (97%)
EPI499897 A/swine/Minnesota/A01366004/2013 (A/H3N2) segment 4 (HA) 2948.4 0.000000e+00 1667/1702 (97%)
EPI472146 A/swine/Minnesota/A01397282/2013 (A/H3N2) segment 4 (HA) 2948.4 0.000000e+00 1666/1701 (97%)
EPI408401 A/swine/South Dakota/A01279279/2012 (A/H3N2) segment 4 (HA) 2948.4 0.000000e+00 1666/1701 (97%)
EPI538920 A/swine/Minnesota/A01501738/2014 (A/H3N2) segment 4 (HA) 2944.7 0.000000e+00 1665/1701 (97%)
EPI324852 A/swine/Minnesota/A01049346/2010 (A/H3N2) segment 4 (HA) 2937.3 0.000000e+00 1664/1701 (97%)
EPI399465 A/swine/Minnesota/A01300213/2012 (A/H3N2) segment 4 (HA) 2909.6 0.000000e+00 1659/1701 (97%)
EPI399351 A/swine/Minnesota/A01328451/2012 (A/H3N2) segment 4 (HA) 2848.7 0.000000e+00 1649/1702 (96%)
EPI399204 A/swine/Minnesota/A01125992/2012 (A/H3N2) segment 4 (HA) 2843.1 0.000000e+00 1648/1702 (96%)
EPI399030 A/swine/Minnesota/A01125993/2012 (A/H3N2) segment 4 (HA) 2843.1 0.000000e+00 1648/1702 (96%)
EPI489259 A/swine/Manitoba/02182/2008 (A/H3N2) segment 4 (HA) 2772.9 0.000000e+00 1635/1701 (96%)
EPI490235 A/swine/Manitoba/00446/2005 (A/H3N2) segment 4 (HA) 2760.0 0.000000e+00 1633/1702 (95%)
EPI489252 A/swine/Manitoba/01782/2007 (A/H3N2) segment 4 (HA) 2760.0 0.000000e+00 1634/1703 (95%)
EPI489182 A/swine/Manitoba/00446/2005 (A/H3N2) segment 4 (HA) 2760.0 0.000000e+00 1633/1702 (95%)
EPI489203 A/swine/Alberta/00805/2005 (A/H3N2) segment 4 (HA) 2754.5 0.000000e+00 1632/1702 (95%)
EPI489196 A/swine/Alberta/SG1405/2005 (A/H3N2) segment 4 (HA) 2754.5 0.000000e+00 1632/1702 (95%)
EPI489189 A/swine/British Columbia/00633/2005 (A/H3N2) segment 4 (HA) 2754.5 0.000000e+00 1633/1703 (95%)
EPI488564 A/swine/Minnesota/SG1238/2005 (A/H3N2) segment 4 (HA) 2754.5 0.000000e+00 1632/1702 (95%)
EPI488557 A/swine/Minnesota/SG1236/2005 (A/H3N2) segment 4 (HA) 2754.5 0.000000e+00 1632/1702 (95%)
EPI337441 A/swine/Minnesota/00611/2005 (A/H3N2) segment 4 (HA) 2754.5 0.000000e+00 1632/1702 (95%)
EPI103199 A/swine/Ontario/33853/2005 (A/H3N2) segment 4 (HA) 2748.9 0.000000e+00 1631/1702 (95%)
EPI103127 A/Ontario/RV1273/2005 (A/H3N2) segment 4 (HA) 2748.9 0.000000e+00 1631/1702 (95%)
EPI490416 A/swine/Iowa/SG1469/2004 (A/H3N2) segment 4 (HA) 2743.4 0.000000e+00 1630/1702 (95%)
EPI457162 A/swine/Nebraska/9330/2006 (A/H3N2) segment 4 (HA) 2743.4 0.000000e+00 1630/1702 (95%)
EPI314335 A/turkey/BC/1529-3/2005 (A/H3N2) segment 4 (HA) 2743.4 0.000000e+00 1631/1703 (95%)
EPI289638 A/swine/Minnesota/1300/2007 (A/H3N2) segment 4 (HA) 2743.4 0.000000e+00 1630/1702 (95%)
EPI314679 A/swine/QC/414/2009 (A/H3N2) segment 4 (HA) 2739.7 0.000000e+00 1630/1702 (95%)
EPI490809 A/swine/Quebec/01002/2006 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1629/1702 (95%)
EPI490805 A/swine/Quebec/01000/2006 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1629/1702 (95%)
EPI489224 A/swine/Manitoba/01179/2006 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1629/1702 (95%)
EPI384268 A/swine/Minnesota/A01201424/2010 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1626/1697 (95%)
EPI229372 A/turkey/OH/313053/2004 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1629/1702 (95%)
EPI158876 A/turkey/MN/366767/2005 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1629/1702 (95%)
EPI103145 A/swine/Alberta/14722/2005 (A/H3N2) segment 4 (HA) 2737.9 0.000000e+00 1629/1702 (95%)
EPI490853 A/swine/North Carolina/00950/2006 (A/H3N2) segment 4 (HA) 2732.3 0.000000e+00 1630/1704 (95%)
EPI490381 A/swine/North Carolina/SG1464/2004 (A/H3N2) segment 4 (HA) 2732.3 0.000000e+00 1628/1702 (95%)
EPI489210 A/swine/Quebec/01001/2006 (A/H3N2) segment 4 (HA) 2732.3 0.000000e+00 1628/1702 (95%)
EPI488550 A/swine/North Carolina/SG1230/2005 (A/H3N2) segment 4 (HA) 2732.3 0.000000e+00 1628/1702 (95%)
EPI103181 A/swine/Manitoba/12707/2005 (A/H3N2) segment 4 (HA) 2732.3 0.000000e+00 1628/1702 (95%)
EPI101389 A/turkey/Ohio/313053/04 (A/H3N2) segment 4 (HA) 2732.3 0.000000e+00 1628/1702 (95%)

H3 sequence does NOT match prior human H3N2v cases.

_________________
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PostPosted: Tue Aug 26, 2014 11:51 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI533921 A/swine/Iowa/A01481221/2014 (A/H3N2) segment 6 (NA) 2558.7 0.000000e+00 1391/1394 (99%)
EPI499645 A/swine/Iowa/A01290671/2013 (A/H3N2) segment 6 (NA) 2542.1 0.000000e+00 1388/1394 (99%)
EPI472193 A/swine/Iowa/A01432826/2013 (A/H3N2) segment 6 (NA) 2536.6 0.000000e+00 1387/1394 (99%)
EPI391420 A/swine/Iowa/A01203104/2011 (A/H3N2) segment 6 (NA) 2525.5 0.000000e+00 1385/1394 (99%)
EPI390851 A/swine/Iowa/A01203304/2012 (A/H3N2) segment 6 (NA) 2525.5 0.000000e+00 1385/1394 (99%)
EPI416887 A/swine/Minnesota/A01442410/2012 (A/H3N2) segment 6 (NA) 2520.0 0.000000e+00 1384/1394 (99%)
EPI406621 A/swine/Minnesota/A01271001/2012 (A/H3N2) segment 6 (NA) 2520.0 0.000000e+00 1384/1394 (99%)
EPI383535 A/swine/Iowa/A01203492/2012 (A/H3N2) segment 6 (NA) 2520.0 0.000000e+00 1384/1394 (99%)
EPI390897 A/swine/Iowa/A01203459/2012 (A/H3N2) segment 6 (NA) 2514.4 0.000000e+00 1383/1394 (99%)
EPI390894 A/swine/Iowa/A01243311/2012 (A/H3N2) segment 6 (NA) 2514.4 0.000000e+00 1383/1394 (99%)
EPI459625 A/swine/Iowa/A01432680/2013 (A/H3N2) segment 6 (NA) 2508.9 0.000000e+00 1382/1394 (99%)
EPI406610 A/swine/Minnesota/A01271014/2012 (A/H3N2) segment 6 (NA) 2508.9 0.000000e+00 1382/1394 (99%)
EPI390896 A/swine/Iowa/A01203463/2012 (A/H3N2) segment 6 (NA) 2508.9 0.000000e+00 1382/1394 (99%)
EPI424011 A/swine/Minnesota/A01442898/2012 (A/H3N2) segment 6 (NA) 2505.2 0.000000e+00 1381/1394 (99%)
EPI467454 A/swine/Iowa/A01432902/2013 (A/H0) segment 6 (NA) 2503.3 0.000000e+00 1381/1394 (99%)
EPI459631 A/swine/Iowa/A01432731/2013 (A/H3N2) segment 6 (NA) 2503.3 0.000000e+00 1381/1394 (99%)
EPI406560 A/swine/Iowa/A01203936/2012 (A/H3N2) segment 6 (NA) 2503.3 0.000000e+00 1381/1394 (99%)
EPI406554 A/swine/Iowa/A01203872/2012 (A/H3N2) segment 6 (NA) 2503.3 0.000000e+00 1381/1394 (99%)
EPI472147 A/swine/Minnesota/A01397282/2013 (A/H3N2) segment 6 (NA) 2497.8 0.000000e+00 1380/1394 (98%)
EPI446472 A/swine/Minnesota/A01432544/2013 (A/H3N2) segment 6 (NA) 2497.8 0.000000e+00 1380/1394 (98%)
EPI406581 A/swine/Iowa/A01203954/2012 (A/H3N2) segment 6 (NA) 2497.8 0.000000e+00 1380/1394 (98%)
EPI406517 A/swine/Iowa/A01432077/2012 (A/H3N2) segment 6 (NA) 2497.8 0.000000e+00 1380/1394 (98%)
EPI399407 A/swine/Minnesota/A01300160/2012 (A/H3N2) segment 6 (NA) 2497.8 0.000000e+00 1380/1394 (98%)
EPI504892 A/swine/Iowa/A01290933/2013 (A/H3N2) segment 6 (NA) 2492.3 0.000000e+00 1379/1394 (98%)
EPI416881 A/swine/Illinois/A01244402/2012 (A/H3N2) segment 6 (NA) 2492.3 0.000000e+00 1379/1394 (98%)
EPI414036 A/swine/Iowa/A01279512/2012 (A/H3N2) segment 6 (NA) 2492.3 0.000000e+00 1379/1394 (98%)
EPI406526 A/swine/Iowa/A01432072/2012 (A/H3N2) segment 6 (NA) 2492.3 0.000000e+00 1379/1394 (98%)
EPI399437 A/swine/Iowa/A01300194/2012 (A/H3N2) segment 6 (NA) 2492.3 0.000000e+00 1379/1394 (98%)
EPI487946 A/swine/Minnesota/A01392515/2013 (A/H3N2) segment 6 (NA) 2486.7 0.000000e+00 1378/1394 (98%)
EPI467461 A/swine/Minnesota/A01432932/2013 (A/H3N2) segment 6 (NA) 2486.7 0.000000e+00 1378/1394 (98%)
EPI453590 A/swine/Minnesota/A01379746/2013 (A/H3N2) segment 6 (NA) 2486.7 0.000000e+00 1378/1394 (98%)
EPI406461 A/swine/Minnesota/A01271227/2012 (A/H3N2) segment 6 (NA) 2486.7 0.000000e+00 1378/1394 (98%)
EPI399452 A/swine/Iowa/A01300195/2012 (A/H3N2) segment 6 (NA) 2486.7 0.000000e+00 1378/1394 (98%)
EPI391437 A/swine/Iowa/A01203248/2012 (A/H3N2) segment 6 (NA) 2486.7 0.000000e+00 1378/1394 (98%)
EPI383559 A/swine/Minnesota/A01203412/2012 (A/H0) segment 6 (NA) 2486.7 0.000000e+00 1379/1395 (98%)
EPI492367 A/swine/Minnesota/A01392044/2013 (A/H3N2) segment 6 (NA) 2481.2 0.000000e+00 1377/1394 (98%)
EPI433284 A/swine/Minnesota/A01280543/2013 (A/H3N2) segment 6 (NA) 2481.2 0.000000e+00 1377/1394 (98%)
EPI408384 A/swine/Minnesota/A01271443/2012 (A/H3N2) segment 6 (NA) 2481.2 0.000000e+00 1377/1394 (98%)
EPI408378 A/swine/Minnesota/A01271731/2012 (A/H3N2) segment 6 (NA) 2481.2 0.000000e+00 1377/1394 (98%)
EPI463696 A/swine/Illinois/A01271617/2012 (A/H3N2) segment 6 (NA) 2475.6 0.000000e+00 1376/1394 (98%)
EPI408381 A/swine/Illinois/A01271623/2012 (A/H3N2) segment 6 (NA) 2475.6 0.000000e+00 1376/1394 (98%)
EPI399293 A/swine/Minnesota/A01327922/2012 (A/H3N2) segment 6 (NA) 2475.6 0.000000e+00 1376/1394 (98%)
EPI399146 A/swine/Minnesota/A01327921/2012 (A/H3N2) segment 6 (NA) 2475.6 0.000000e+00 1376/1394 (98%)
EPI383540 A/swine/Minnesota/A01203517/2012 (A/H3N2) segment 6 (NA) 2475.6 0.000000e+00 1376/1394 (98%)
EPI439858 A/swine/Minnesota/A01432462/2013 (A/H3N2) segment 6 (NA) 2473.8 0.000000e+00 1375/1394 (98%)
EPI393781 A/Ohio/74/2012 (A/H3N2) segment 6 (NA) 2471.9 0.000000e+00 1374/1392 (98%)
EPI446924 A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI446916 A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI446860 A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI446835 A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI414161 A/swine/Iowa/A01203891/2012 (A/H0) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI401703 A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI401688 A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI398671 A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI398544 A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI398536 A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397946 A/Ohio/84/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397904 A/Hawaii/03/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397626 A/Ohio/57/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397554 A/Ohio/86/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397425 A/Minnesota/15/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397387 A/Indiana/49/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397212 A/Indiana/115/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI396245 A/Indiana/125/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI396229 A/Indiana/147/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI396222 A/Indiana/57/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI396191 A/Ohio/77/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI395876 A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI395868 A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI394925 A/Illinois/11/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI394065 A/Indiana/60/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI393701 A/Ohio/64/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI393526 A/West Virginia/15/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI392710 A/Indiana/60/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI392707 A/Indiana/59/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI383539 A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI346492 A/West Virginia/06/2011 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI398512 A/swine/Minnesota/A01301665/2012 (A/H3N2) segment 6 (NA) 2466.4 0.000000e+00 1374/1394 (98%)
EPI383533 A/swine/Iowa/A01203482/2012 (A/H3N2) segment 6 (NA) 2466.4 0.000000e+00 1374/1394 (98%)
EPI509736 A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI492350 A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI446885 A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI446876 A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI446827 A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI446797 A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI443547 A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI443539 A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI443531 A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI443523 A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI443515 A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI443507 A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI433303 A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI433295 A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI426886 A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI414172 A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI404892 A/Iowa/16/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI401685 A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI401681 A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI400106 A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI400102 A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)

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PostPosted: Tue Aug 26, 2014 11:52 am 
Offline

Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
niman wrote:
EPI533921 A/swine/Iowa/A01481221/2014 (A/H3N2) segment 6 (NA) 2558.7 0.000000e+00 1391/1394 (99%)
EPI499645 A/swine/Iowa/A01290671/2013 (A/H3N2) segment 6 (NA) 2542.1 0.000000e+00 1388/1394 (99%)
EPI472193 A/swine/Iowa/A01432826/2013 (A/H3N2) segment 6 (NA) 2536.6 0.000000e+00 1387/1394 (99%)
EPI391420 A/swine/Iowa/A01203104/2011 (A/H3N2) segment 6 (NA) 2525.5 0.000000e+00 1385/1394 (99%)
EPI390851 A/swine/Iowa/A01203304/2012 (A/H3N2) segment 6 (NA) 2525.5 0.000000e+00 1385/1394 (99%)
EPI416887 A/swine/Minnesota/A01442410/2012 (A/H3N2) segment 6 (NA) 2520.0 0.000000e+00 1384/1394 (99%)
EPI406621 A/swine/Minnesota/A01271001/2012 (A/H3N2) segment 6 (NA) 2520.0 0.000000e+00 1384/1394 (99%)
EPI383535 A/swine/Iowa/A01203492/2012 (A/H3N2) segment 6 (NA) 2520.0 0.000000e+00 1384/1394 (99%)
EPI390897 A/swine/Iowa/A01203459/2012 (A/H3N2) segment 6 (NA) 2514.4 0.000000e+00 1383/1394 (99%)
EPI390894 A/swine/Iowa/A01243311/2012 (A/H3N2) segment 6 (NA) 2514.4 0.000000e+00 1383/1394 (99%)
EPI459625 A/swine/Iowa/A01432680/2013 (A/H3N2) segment 6 (NA) 2508.9 0.000000e+00 1382/1394 (99%)
EPI406610 A/swine/Minnesota/A01271014/2012 (A/H3N2) segment 6 (NA) 2508.9 0.000000e+00 1382/1394 (99%)
EPI390896 A/swine/Iowa/A01203463/2012 (A/H3N2) segment 6 (NA) 2508.9 0.000000e+00 1382/1394 (99%)
EPI424011 A/swine/Minnesota/A01442898/2012 (A/H3N2) segment 6 (NA) 2505.2 0.000000e+00 1381/1394 (99%)
EPI467454 A/swine/Iowa/A01432902/2013 (A/H0) segment 6 (NA) 2503.3 0.000000e+00 1381/1394 (99%)
EPI459631 A/swine/Iowa/A01432731/2013 (A/H3N2) segment 6 (NA) 2503.3 0.000000e+00 1381/1394 (99%)
EPI406560 A/swine/Iowa/A01203936/2012 (A/H3N2) segment 6 (NA) 2503.3 0.000000e+00 1381/1394 (99%)
EPI406554 A/swine/Iowa/A01203872/2012 (A/H3N2) segment 6 (NA) 2503.3 0.000000e+00 1381/1394 (99%)
EPI472147 A/swine/Minnesota/A01397282/2013 (A/H3N2) segment 6 (NA) 2497.8 0.000000e+00 1380/1394 (98%)
EPI446472 A/swine/Minnesota/A01432544/2013 (A/H3N2) segment 6 (NA) 2497.8 0.000000e+00 1380/1394 (98%)
EPI406581 A/swine/Iowa/A01203954/2012 (A/H3N2) segment 6 (NA) 2497.8 0.000000e+00 1380/1394 (98%)
EPI406517 A/swine/Iowa/A01432077/2012 (A/H3N2) segment 6 (NA) 2497.8 0.000000e+00 1380/1394 (98%)
EPI399407 A/swine/Minnesota/A01300160/2012 (A/H3N2) segment 6 (NA) 2497.8 0.000000e+00 1380/1394 (98%)
EPI504892 A/swine/Iowa/A01290933/2013 (A/H3N2) segment 6 (NA) 2492.3 0.000000e+00 1379/1394 (98%)
EPI416881 A/swine/Illinois/A01244402/2012 (A/H3N2) segment 6 (NA) 2492.3 0.000000e+00 1379/1394 (98%)
EPI414036 A/swine/Iowa/A01279512/2012 (A/H3N2) segment 6 (NA) 2492.3 0.000000e+00 1379/1394 (98%)
EPI406526 A/swine/Iowa/A01432072/2012 (A/H3N2) segment 6 (NA) 2492.3 0.000000e+00 1379/1394 (98%)
EPI399437 A/swine/Iowa/A01300194/2012 (A/H3N2) segment 6 (NA) 2492.3 0.000000e+00 1379/1394 (98%)
EPI487946 A/swine/Minnesota/A01392515/2013 (A/H3N2) segment 6 (NA) 2486.7 0.000000e+00 1378/1394 (98%)
EPI467461 A/swine/Minnesota/A01432932/2013 (A/H3N2) segment 6 (NA) 2486.7 0.000000e+00 1378/1394 (98%)
EPI453590 A/swine/Minnesota/A01379746/2013 (A/H3N2) segment 6 (NA) 2486.7 0.000000e+00 1378/1394 (98%)
EPI406461 A/swine/Minnesota/A01271227/2012 (A/H3N2) segment 6 (NA) 2486.7 0.000000e+00 1378/1394 (98%)
EPI399452 A/swine/Iowa/A01300195/2012 (A/H3N2) segment 6 (NA) 2486.7 0.000000e+00 1378/1394 (98%)
EPI391437 A/swine/Iowa/A01203248/2012 (A/H3N2) segment 6 (NA) 2486.7 0.000000e+00 1378/1394 (98%)
EPI383559 A/swine/Minnesota/A01203412/2012 (A/H0) segment 6 (NA) 2486.7 0.000000e+00 1379/1395 (98%)
EPI492367 A/swine/Minnesota/A01392044/2013 (A/H3N2) segment 6 (NA) 2481.2 0.000000e+00 1377/1394 (98%)
EPI433284 A/swine/Minnesota/A01280543/2013 (A/H3N2) segment 6 (NA) 2481.2 0.000000e+00 1377/1394 (98%)
EPI408384 A/swine/Minnesota/A01271443/2012 (A/H3N2) segment 6 (NA) 2481.2 0.000000e+00 1377/1394 (98%)
EPI408378 A/swine/Minnesota/A01271731/2012 (A/H3N2) segment 6 (NA) 2481.2 0.000000e+00 1377/1394 (98%)
EPI463696 A/swine/Illinois/A01271617/2012 (A/H3N2) segment 6 (NA) 2475.6 0.000000e+00 1376/1394 (98%)
EPI408381 A/swine/Illinois/A01271623/2012 (A/H3N2) segment 6 (NA) 2475.6 0.000000e+00 1376/1394 (98%)
EPI399293 A/swine/Minnesota/A01327922/2012 (A/H3N2) segment 6 (NA) 2475.6 0.000000e+00 1376/1394 (98%)
EPI399146 A/swine/Minnesota/A01327921/2012 (A/H3N2) segment 6 (NA) 2475.6 0.000000e+00 1376/1394 (98%)
EPI383540 A/swine/Minnesota/A01203517/2012 (A/H3N2) segment 6 (NA) 2475.6 0.000000e+00 1376/1394 (98%)
EPI439858 A/swine/Minnesota/A01432462/2013 (A/H3N2) segment 6 (NA) 2473.8 0.000000e+00 1375/1394 (98%)
EPI393781 A/Ohio/74/2012 (A/H3N2) segment 6 (NA) 2471.9 0.000000e+00 1374/1392 (98%)
EPI446924 A/swine/Ohio/12TOSU50/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI446916 A/swine/Ohio/12TOSU52/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI446860 A/swine/Ohio/12TOSU421/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI446835 A/swine/Ohio/12TOSU433/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI414161 A/swine/Iowa/A01203891/2012 (A/H0) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI401703 A/swine/Ohio/12TOSU527/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI401688 A/swine/Ohio/12TOSU522/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI398671 A/swine/North Carolina/A01270394/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI398544 A/swine/Ohio/A00152576/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI398536 A/swine/Ohio/A01208457/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397946 A/Ohio/84/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397904 A/Hawaii/03/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397626 A/Ohio/57/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397554 A/Ohio/86/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397425 A/Minnesota/15/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397387 A/Indiana/49/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI397212 A/Indiana/115/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI396245 A/Indiana/125/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI396229 A/Indiana/147/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI396222 A/Indiana/57/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI396191 A/Ohio/77/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI395876 A/swine/Ohio/12TOSU447/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI395868 A/swine/Ohio/12TOSU450/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI394925 A/Illinois/11/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI394065 A/Indiana/60/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI393701 A/Ohio/64/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI393526 A/West Virginia/15/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI392710 A/Indiana/60/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI392707 A/Indiana/59/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI383539 A/swine/Indiana/A01203509/2012 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI346492 A/West Virginia/06/2011 (A/H3N2) segment 6 (NA) 2470.1 0.000000e+00 1375/1394 (98%)
EPI398512 A/swine/Minnesota/A01301665/2012 (A/H3N2) segment 6 (NA) 2466.4 0.000000e+00 1374/1394 (98%)
EPI383533 A/swine/Iowa/A01203482/2012 (A/H3N2) segment 6 (NA) 2466.4 0.000000e+00 1374/1394 (98%)
EPI509736 A/swine/Iowa/13H075/2013 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI492350 A/swine/Indiana/A00968364/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI446885 A/swine/Ohio/12TOSU409/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI446876 A/swine/Ohio/12TOSU439/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI446827 A/swine/Ohio/12TOSU338/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI446797 A/swine/Ohio/12TOSU333/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI443547 A/swine/Ohio/12TOSU318/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI443539 A/swine/Ohio/12TOSU176/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI443531 A/swine/Ohio/12TOSU129/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI443523 A/swine/Ohio/12TOSU308/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI443515 A/swine/Ohio/12TOSU138/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI443507 A/swine/Ohio/12TOSU175/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI433303 A/swine/Ohio/12TOSU363/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI433295 A/swine/Ohio/12TOSU370/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI426886 A/swine/Iowa/A01432271/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI414172 A/swine/Indiana/A00968398/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI404892 A/Iowa/16/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI401685 A/swine/Ohio/12TOSU484/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI401681 A/swine/Ohio/12TOSU483/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI400106 A/swine/Indiana/A00968308/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)
EPI400102 A/swine/Indiana/A00968397/2012 (A/H3N2) segment 6 (NA) 2464.6 0.000000e+00 1374/1394 (98%)

N2 matches 2012 cases

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PostPosted: Tue Aug 26, 2014 11:55 am 
Offline

Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI533920 A/swine/Iowa/A01481221/2014 (A/H3N2) segment 7 (MP) 1788.7 0.000000e+00 970/971 (99%)
EPI449017 A/swine/Wyoming/A01379346/2013 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI433321 A/swine/Wyoming/A01444560/2013 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI427146 A/swine/Maryland/A01444460/2013 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI427131 A/swine/Wyoming/A01444562/2013 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI406513 A/swine/Iowa/A01432069/2012 (A/H1N1) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI395845 A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI391459 A/swine/Wisconsin/A01203142/2012 (A/H1N1) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI390882 A/swine/Michigan/A01203374/2012 (A/H1N1) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI390675 A/swine/Indiana/A01243254/2012 (A/H1N1) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI383548 A/swine/Iowa/A01203503/2012 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI347602 A/Iowa/07/2011 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI346435 A/Iowa/08/2011 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI346427 A/Iowa/07/2011 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI346419 A/Iowa/09/2011 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI341736 A/swine/Iowa/A01049970/2011 (A/H1N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI342699 A/Iowa/09/2011 (A/H3N2) segment 7 (MP) 1773.9 0.000000e+00 966/969 (99%)
EPI499646 A/swine/Iowa/A01290671/2013 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI492963 A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI492380 A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI489727 A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI472194 A/swine/Iowa/A01432826/2013 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI461427 A/swine/Ohio/11SW233/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI461420 A/swine/Ohio/11SW149/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI461386 A/swine/Ohio/11SW238/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459607 A/swine/Ohio/11SW144/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459599 A/swine/Ohio/11SW121/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459591 A/swine/Ohio/11SW127/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459573 A/swine/Ohio/11SW230/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459535 A/swine/Ohio/11SW349/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459520 A/swine/Ohio/11SW223/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459499 A/swine/Ohio/11SW111/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459488 A/swine/Ohio/11SW133/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459466 A/swine/Ohio/11SW344/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI457158 A/swine/Korea/CY03-19/2012 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI457150 A/swine/Korea/CY03-18/2012 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI457142 A/swine/Korea/CY03-17/2012 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI457134 A/swine/Korea/CY03-16/2012 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI457126 A/swine/Korea/CY03-15/2012 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI457118 A/swine/Korea/CY03-14/2012 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI453430 A/swine/Korea/D79/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI441649 A/swine/Iowa/A01445788/2013 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI441498 A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI433310 A/swine/Iowa/A01444786/2013 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI433271 A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI426874 A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415974 A/swine/Ohio/11SW232/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415966 A/swine/Ohio/11SW347/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415958 A/swine/Ohio/11SW240/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415950 A/swine/Ohio/11SW239/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415942 A/swine/Ohio/11SW237/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415926 A/swine/Ohio/11SW235/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415918 A/swine/Ohio/11SW234/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415904 A/swine/Ohio/11SW231/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415896 A/swine/Ohio/11SW229/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415888 A/swine/Ohio/11SW228/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415880 A/swine/Ohio/11SW227/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415871 A/swine/Ohio/11SW226/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415862 A/swine/Ohio/11SW225/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415853 A/swine/Ohio/11SW224/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415846 A/swine/Ohio/11SW221/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415838 A/swine/Ohio/11SW220/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415830 A/swine/Ohio/11SW218/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415812 A/swine/Ohio/11SW216/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415804 A/swine/Ohio/11SW215/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415796 A/swine/Ohio/11SW213/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415779 A/swine/Ohio/11SW210/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415771 A/swine/Ohio/11SW209/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415762 A/swine/Ohio/11SW207/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415745 A/swine/Ohio/11SW205/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415737 A/swine/Ohio/11SW204/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415720 A/swine/Ohio/11SW202/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415685 A/swine/Ohio/11SW196/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415617 A/swine/Ohio/11SW184/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415573 A/swine/Ohio/11SW175/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415556 A/swine/Ohio/11SW173/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415548 A/swine/Ohio/11SW172/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415497 A/swine/Ohio/11SW163/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415481 A/swine/Ohio/11SW146/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415473 A/swine/Ohio/11SW140/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415465 A/swine/Ohio/11SW139/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415457 A/swine/Ohio/11SW138/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415449 A/swine/Ohio/11SW137/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415441 A/swine/Ohio/11SW136/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415433 A/swine/Ohio/11SW135/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415425 A/swine/Ohio/11SW134/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415415 A/swine/Ohio/11SW96/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415411 A/swine/Ohio/11SW132/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415403 A/swine/Ohio/11SW131/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415395 A/swine/Ohio/11SW130/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415387 A/swine/Ohio/11SW129/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415379 A/swine/Ohio/11SW128/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415371 A/swine/Ohio/11SW126/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415365 A/swine/Ohio/11SW125/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415357 A/swine/Ohio/11SW124/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415349 A/swine/Ohio/11SW123/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415341 A/swine/Ohio/11SW122/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415313 A/swine/Ohio/11SW95/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415289 A/swine/Ohio/11SW87/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415257 A/swine/Ohio/11SW114/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)

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PostPosted: Tue Aug 26, 2014 11:56 am 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
niman wrote:
EPI533920 A/swine/Iowa/A01481221/2014 (A/H3N2) segment 7 (MP) 1788.7 0.000000e+00 970/971 (99%)
EPI449017 A/swine/Wyoming/A01379346/2013 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI433321 A/swine/Wyoming/A01444560/2013 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI427146 A/swine/Maryland/A01444460/2013 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI427131 A/swine/Wyoming/A01444562/2013 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI406513 A/swine/Iowa/A01432069/2012 (A/H1N1) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI395845 A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI391459 A/swine/Wisconsin/A01203142/2012 (A/H1N1) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI390882 A/swine/Michigan/A01203374/2012 (A/H1N1) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI390675 A/swine/Indiana/A01243254/2012 (A/H1N1) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI383548 A/swine/Iowa/A01203503/2012 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI347602 A/Iowa/07/2011 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI346435 A/Iowa/08/2011 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI346427 A/Iowa/07/2011 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI346419 A/Iowa/09/2011 (A/H3N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI341736 A/swine/Iowa/A01049970/2011 (A/H1N2) segment 7 (MP) 1777.6 0.000000e+00 968/971 (99%)
EPI342699 A/Iowa/09/2011 (A/H3N2) segment 7 (MP) 1773.9 0.000000e+00 966/969 (99%)
EPI499646 A/swine/Iowa/A01290671/2013 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI492963 A/swine/Minnesota/A01394248/2013 (A/H1N1) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI492380 A/swine/Minnesota/A01392079/2013 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI489727 A/swine/Minnesota/A01394021/2013 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI472194 A/swine/Iowa/A01432826/2013 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI461427 A/swine/Ohio/11SW233/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI461420 A/swine/Ohio/11SW149/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI461386 A/swine/Ohio/11SW238/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459607 A/swine/Ohio/11SW144/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459599 A/swine/Ohio/11SW121/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459591 A/swine/Ohio/11SW127/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459573 A/swine/Ohio/11SW230/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459535 A/swine/Ohio/11SW349/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459520 A/swine/Ohio/11SW223/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459499 A/swine/Ohio/11SW111/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459488 A/swine/Ohio/11SW133/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI459466 A/swine/Ohio/11SW344/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI457158 A/swine/Korea/CY03-19/2012 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI457150 A/swine/Korea/CY03-18/2012 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI457142 A/swine/Korea/CY03-17/2012 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI457134 A/swine/Korea/CY03-16/2012 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI457126 A/swine/Korea/CY03-15/2012 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI457118 A/swine/Korea/CY03-14/2012 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI453430 A/swine/Korea/D79/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI441649 A/swine/Iowa/A01445788/2013 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI441498 A/swine/Ohio/A01349140/2013 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI433310 A/swine/Iowa/A01444786/2013 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI433271 A/swine/Ohio/A01280357/2013 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI426874 A/swine/Ohio/A01280112/2013 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415974 A/swine/Ohio/11SW232/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415966 A/swine/Ohio/11SW347/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415958 A/swine/Ohio/11SW240/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415950 A/swine/Ohio/11SW239/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415942 A/swine/Ohio/11SW237/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415926 A/swine/Ohio/11SW235/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415918 A/swine/Ohio/11SW234/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415904 A/swine/Ohio/11SW231/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415896 A/swine/Ohio/11SW229/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415888 A/swine/Ohio/11SW228/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415880 A/swine/Ohio/11SW227/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415871 A/swine/Ohio/11SW226/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415862 A/swine/Ohio/11SW225/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415853 A/swine/Ohio/11SW224/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415846 A/swine/Ohio/11SW221/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415838 A/swine/Ohio/11SW220/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415830 A/swine/Ohio/11SW218/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415812 A/swine/Ohio/11SW216/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415804 A/swine/Ohio/11SW215/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415796 A/swine/Ohio/11SW213/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415779 A/swine/Ohio/11SW210/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415771 A/swine/Ohio/11SW209/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415762 A/swine/Ohio/11SW207/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415745 A/swine/Ohio/11SW205/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415737 A/swine/Ohio/11SW204/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415720 A/swine/Ohio/11SW202/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415685 A/swine/Ohio/11SW196/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415617 A/swine/Ohio/11SW184/2011 (A/H0) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415573 A/swine/Ohio/11SW175/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415556 A/swine/Ohio/11SW173/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415548 A/swine/Ohio/11SW172/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415497 A/swine/Ohio/11SW163/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415481 A/swine/Ohio/11SW146/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415473 A/swine/Ohio/11SW140/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415465 A/swine/Ohio/11SW139/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415457 A/swine/Ohio/11SW138/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415449 A/swine/Ohio/11SW137/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415441 A/swine/Ohio/11SW136/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415433 A/swine/Ohio/11SW135/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415425 A/swine/Ohio/11SW134/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415415 A/swine/Ohio/11SW96/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415411 A/swine/Ohio/11SW132/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415403 A/swine/Ohio/11SW131/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415395 A/swine/Ohio/11SW130/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415387 A/swine/Ohio/11SW129/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415379 A/swine/Ohio/11SW128/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415371 A/swine/Ohio/11SW126/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415365 A/swine/Ohio/11SW125/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415357 A/swine/Ohio/11SW124/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415349 A/swine/Ohio/11SW123/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415341 A/swine/Ohio/11SW122/2011 (A/H1N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415313 A/swine/Ohio/11SW95/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415289 A/swine/Ohio/11SW87/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)
EPI415257 A/swine/Ohio/11SW114/2011 (A/H3N2) segment 7 (MP) 1772.1 0.000000e+00 967/971 (99%)

MP matches 2011 cases

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PostPosted: Tue Aug 26, 2014 12:00 pm 
Offline

Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI401708 A/swine/Minnesota/A01301731/2012 (A/H1N2) segment 1 (PB2) 4128.4 0.000000e+00 2265/2280 (99%)
EPI397669 A/Minnesota/14/2012 (A/H1N2) segment 1 (PB2) 4122.8 0.000000e+00 2264/2280 (99%)
EPI441124 A/swine/Indiana/A01202631/2011 (A/H1N2) segment 1 (PB2) 4100.7 0.000000e+00 2260/2280 (99%)
EPI395304 A/Minnesota/14/2012 (A/H1N2) segment 1 (PB2) 4098.8 0.000000e+00 2251/2267 (99%)
EPI342606 A/swine/NY/A01104005/2011 (A/H3N2) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%)
EPI384167 A/swine/Iowa/A01202573/2011 (A/H3N2) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%)
EPI383834 A/swine/Iowa/A01202530/2011 (A/H3N2) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%)
EPI384177 A/swine/Indiana/A01202621/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI384162 A/swine/Iowa/A01202529/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI369042 A/swine/Illinois/A00857138b/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI369034 A/swine/Illinois/A00857138a/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI369019 A/swine/Illinois/A00857300/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI351659 A/swine/Iowa/A01202659/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI351650 A/swine/Iowa/A01202640/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI344394 A/Indiana/10/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI398547 A/swine/Illinois/A01240908/2011 (A/H3N2) segment 1 (PB2) 4076.7 0.000000e+00 2255/2280 (98%)
EPI433564 A/swine/Indiana/A01327215/2012 (A/H3N2) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%)
EPI395841 A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%)
EPI384217 A/swine/Illinois/A01241842/2012 (A/H3N2) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%)
EPI384157 A/swine/Iowa/A01202639/2011 (A/H3N2) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%)
EPI384152 A/swine/Iowa/A01241840/2012 (A/H3N2) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%)
EPI345358 A/Indiana/10/2011 (A/H3N2) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%)
EPI433559 A/swine/Indiana/A01327213/2012 (A/H3N2) segment 1 (PB2) 4069.3 0.000000e+00 2254/2280 (98%)
EPI465141 A/swine/Illinois/A01240835/2012 (A/H3N2) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%)
EPI424024 A/swine/Indiana/A00968365/2012 (A/H1N1) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%)
EPI385912 A/swine/Illinois/A01241871/2012 (A/H3N2) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%)
EPI384054 A/swine/Ohio/A01203186/2012 (A/H3N2) segment 1 (PB2) 4063.7 0.000000e+00 2253/2280 (98%)
EPI465131 A/swine/Iowa/A01202878/2011 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%)
EPI453424 A/swine/Korea/D79/2011 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%)
EPI453423 A/swine/Korea/A18/2011 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%)
EPI384192 A/swine/Iowa/A01202879/2011 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%)
EPI346437 A/Iowa/08/2011 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%)
EPI346429 A/Iowa/07/2011 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%)
EPI459550 A/swine/Ohio/11SW116/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI459522 A/swine/Ohio/11SW177/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI459490 A/swine/Ohio/11SW162/2011 (A/H1N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI453422 A/swine/Korea/KSB/2012 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415827 A/swine/Ohio/11SW217/2011 (A/H0) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415665 A/swine/Ohio/11SW191/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415657 A/swine/Ohio/11SW189/2011 (A/H0) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415589 A/swine/Ohio/11SW178/2011 (A/H0) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415571 A/swine/Ohio/11SW174/2011 (A/H1N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415546 A/swine/Ohio/11SW171/2011 (A/H0) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415528 A/swine/Ohio/11SW169/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415511 A/swine/Ohio/11SW166/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415339 A/swine/Ohio/11SW98/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415331 A/swine/Ohio/11SW97/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415311 A/swine/Ohio/11SW94/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415303 A/swine/Ohio/11SW93/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415295 A/swine/Ohio/11SW87/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415287 A/swine/Ohio/11SW119/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415271 A/swine/Ohio/11SW115/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415263 A/swine/Ohio/11SW114/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI397665 A/Michigan/23/2012 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI397663 A/Michigan/19/2012 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI390744 A/swine/Indiana/A01049964/2011 (A/H1N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI389974 A/swine/Illinois/A01202978/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI383847 A/swine/Texas/A01104013/2012 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI346421 A/Iowa/09/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI344402 A/Indiana/08/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI333194 A/Indiana/08/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI475533 A/swine/Illinois/A01327184/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI475529 A/swine/Indiana/A01243254/2012 (A/H1N1) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI475518 A/swine/Illinois/A01327629/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI457287 A/swine/Korea/CY03-14/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI457152 A/swine/Korea/CY03-19/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI457144 A/swine/Korea/CY03-18/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI457136 A/swine/Korea/CY03-17/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI457128 A/swine/Korea/CY03-16/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI457120 A/swine/Korea/CY03-15/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415793 A/swine/Ohio/11SW211/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415777 A/swine/Ohio/11SW209/2011 (A/H0) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415718 A/swine/Ohio/11SW201/2011 (A/H0) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415699 A/swine/Ohio/11SW197/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415683 A/swine/Ohio/11SW195/2011 (A/H0) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415647 A/swine/Ohio/11SW187/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415639 A/swine/Ohio/11SW186/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415631 A/swine/Ohio/11SW185/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415613 A/swine/Ohio/11SW183/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415605 A/swine/Ohio/11SW180/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415597 A/swine/Ohio/11SW179/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415495 A/swine/Ohio/11SW161/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415279 A/swine/Ohio/11SW118/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415239 A/swine/Ohio/11SW109/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI397307 A/swine/Ohio/1/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI396306 A/Michigan/20/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI369061 A/swine/Illinois/A00857304b/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI369053 A/swine/Illinois/A00857304a/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI335607 A/Pennsylvania/09/2011 (A/H3N2) segment 1 (PB2) 4047.1 0.000000e+00 2250/2280 (98%)
EPI489076 A/swine/Arkansas/SG1376/2011 (A/H1N2) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%)
EPI461422 A/swine/Ohio/11SW233/2011 (A/H0) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%)
EPI459468 A/swine/Ohio/11SW214/2011 (A/H3N2) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%)
EPI459200 A/swine/Iowa/A01203809/2012 (A/H1N1) segment 1 (PB2) 4045.3 0.000000e+00 2251/2281 (98%)
EPI459107 A/swine/Illinois/A01203923/2012 (A/H1N1) segment 1 (PB2) 4045.3 0.000000e+00 2251/2281 (98%)
EPI441149 A/swine/South Dakota/A01267895/2012 (A/H1N1) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%)
EPI397327 A/swine/Ohio/6/2012 (A/H3N2) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%)
EPI384059 A/swine/Illinois/A01241469/2012 (A/H3N2) segment 1 (PB2) 4045.3 0.000000e+00 2251/2281 (98%)
EPI506422 A/swine/Indiana/A00968351/2011 (A/H1N1) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%)
EPI475554 A/swine/Michigan/A01203374/2012 (A/H1N1) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%)
EPI461388 A/swine/Ohio/11SW208/2011 (A/H3N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%)

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PostPosted: Tue Aug 26, 2014 12:01 pm 
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Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
niman wrote:
EPI401708 A/swine/Minnesota/A01301731/2012 (A/H1N2) segment 1 (PB2) 4128.4 0.000000e+00 2265/2280 (99%)
EPI397669 A/Minnesota/14/2012 (A/H1N2) segment 1 (PB2) 4122.8 0.000000e+00 2264/2280 (99%)
EPI441124 A/swine/Indiana/A01202631/2011 (A/H1N2) segment 1 (PB2) 4100.7 0.000000e+00 2260/2280 (99%)
EPI395304 A/Minnesota/14/2012 (A/H1N2) segment 1 (PB2) 4098.8 0.000000e+00 2251/2267 (99%)
EPI342606 A/swine/NY/A01104005/2011 (A/H3N2) segment 1 (PB2) 4095.1 0.000000e+00 2259/2280 (99%)
EPI384167 A/swine/Iowa/A01202573/2011 (A/H3N2) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%)
EPI383834 A/swine/Iowa/A01202530/2011 (A/H3N2) segment 1 (PB2) 4084.1 0.000000e+00 2257/2280 (98%)
EPI384177 A/swine/Indiana/A01202621/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI384162 A/swine/Iowa/A01202529/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI369042 A/swine/Illinois/A00857138b/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI369034 A/swine/Illinois/A00857138a/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI369019 A/swine/Illinois/A00857300/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI351659 A/swine/Iowa/A01202659/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI351650 A/swine/Iowa/A01202640/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI344394 A/Indiana/10/2011 (A/H3N2) segment 1 (PB2) 4078.5 0.000000e+00 2256/2280 (98%)
EPI398547 A/swine/Illinois/A01240908/2011 (A/H3N2) segment 1 (PB2) 4076.7 0.000000e+00 2255/2280 (98%)
EPI433564 A/swine/Indiana/A01327215/2012 (A/H3N2) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%)
EPI395841 A/mink/Wisconsin/31512-7/2012 (A/H3N2) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%)
EPI384217 A/swine/Illinois/A01241842/2012 (A/H3N2) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%)
EPI384157 A/swine/Iowa/A01202639/2011 (A/H3N2) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%)
EPI384152 A/swine/Iowa/A01241840/2012 (A/H3N2) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%)
EPI345358 A/Indiana/10/2011 (A/H3N2) segment 1 (PB2) 4073.0 0.000000e+00 2255/2280 (98%)
EPI433559 A/swine/Indiana/A01327213/2012 (A/H3N2) segment 1 (PB2) 4069.3 0.000000e+00 2254/2280 (98%)
EPI465141 A/swine/Illinois/A01240835/2012 (A/H3N2) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%)
EPI424024 A/swine/Indiana/A00968365/2012 (A/H1N1) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%)
EPI385912 A/swine/Illinois/A01241871/2012 (A/H3N2) segment 1 (PB2) 4067.4 0.000000e+00 2254/2280 (98%)
EPI384054 A/swine/Ohio/A01203186/2012 (A/H3N2) segment 1 (PB2) 4063.7 0.000000e+00 2253/2280 (98%)
EPI465131 A/swine/Iowa/A01202878/2011 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%)
EPI453424 A/swine/Korea/D79/2011 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%)
EPI453423 A/swine/Korea/A18/2011 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%)
EPI384192 A/swine/Iowa/A01202879/2011 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%)
EPI346437 A/Iowa/08/2011 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%)
EPI346429 A/Iowa/07/2011 (A/H3N2) segment 1 (PB2) 4061.9 0.000000e+00 2253/2280 (98%)
EPI459550 A/swine/Ohio/11SW116/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI459522 A/swine/Ohio/11SW177/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI459490 A/swine/Ohio/11SW162/2011 (A/H1N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI453422 A/swine/Korea/KSB/2012 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415827 A/swine/Ohio/11SW217/2011 (A/H0) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415665 A/swine/Ohio/11SW191/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415657 A/swine/Ohio/11SW189/2011 (A/H0) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415589 A/swine/Ohio/11SW178/2011 (A/H0) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415571 A/swine/Ohio/11SW174/2011 (A/H1N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415546 A/swine/Ohio/11SW171/2011 (A/H0) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415528 A/swine/Ohio/11SW169/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415511 A/swine/Ohio/11SW166/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415339 A/swine/Ohio/11SW98/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415331 A/swine/Ohio/11SW97/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415311 A/swine/Ohio/11SW94/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415303 A/swine/Ohio/11SW93/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415295 A/swine/Ohio/11SW87/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415287 A/swine/Ohio/11SW119/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415271 A/swine/Ohio/11SW115/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI415263 A/swine/Ohio/11SW114/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI397665 A/Michigan/23/2012 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI397663 A/Michigan/19/2012 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI390744 A/swine/Indiana/A01049964/2011 (A/H1N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI389974 A/swine/Illinois/A01202978/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI383847 A/swine/Texas/A01104013/2012 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI346421 A/Iowa/09/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI344402 A/Indiana/08/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI333194 A/Indiana/08/2011 (A/H3N2) segment 1 (PB2) 4056.4 0.000000e+00 2252/2280 (98%)
EPI475533 A/swine/Illinois/A01327184/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI475529 A/swine/Indiana/A01243254/2012 (A/H1N1) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI475518 A/swine/Illinois/A01327629/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI457287 A/swine/Korea/CY03-14/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI457152 A/swine/Korea/CY03-19/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI457144 A/swine/Korea/CY03-18/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI457136 A/swine/Korea/CY03-17/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI457128 A/swine/Korea/CY03-16/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI457120 A/swine/Korea/CY03-15/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415793 A/swine/Ohio/11SW211/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415777 A/swine/Ohio/11SW209/2011 (A/H0) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415718 A/swine/Ohio/11SW201/2011 (A/H0) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415699 A/swine/Ohio/11SW197/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415683 A/swine/Ohio/11SW195/2011 (A/H0) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415647 A/swine/Ohio/11SW187/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415639 A/swine/Ohio/11SW186/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415631 A/swine/Ohio/11SW185/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415613 A/swine/Ohio/11SW183/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415605 A/swine/Ohio/11SW180/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415597 A/swine/Ohio/11SW179/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415495 A/swine/Ohio/11SW161/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415279 A/swine/Ohio/11SW118/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI415239 A/swine/Ohio/11SW109/2011 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI397307 A/swine/Ohio/1/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI396306 A/Michigan/20/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI369061 A/swine/Illinois/A00857304b/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI369053 A/swine/Illinois/A00857304a/2012 (A/H3N2) segment 1 (PB2) 4050.8 0.000000e+00 2251/2280 (98%)
EPI335607 A/Pennsylvania/09/2011 (A/H3N2) segment 1 (PB2) 4047.1 0.000000e+00 2250/2280 (98%)
EPI489076 A/swine/Arkansas/SG1376/2011 (A/H1N2) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%)
EPI461422 A/swine/Ohio/11SW233/2011 (A/H0) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%)
EPI459468 A/swine/Ohio/11SW214/2011 (A/H3N2) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%)
EPI459200 A/swine/Iowa/A01203809/2012 (A/H1N1) segment 1 (PB2) 4045.3 0.000000e+00 2251/2281 (98%)
EPI459107 A/swine/Illinois/A01203923/2012 (A/H1N1) segment 1 (PB2) 4045.3 0.000000e+00 2251/2281 (98%)
EPI441149 A/swine/South Dakota/A01267895/2012 (A/H1N1) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%)
EPI397327 A/swine/Ohio/6/2012 (A/H3N2) segment 1 (PB2) 4045.3 0.000000e+00 2250/2280 (98%)
EPI384059 A/swine/Illinois/A01241469/2012 (A/H3N2) segment 1 (PB2) 4045.3 0.000000e+00 2251/2281 (98%)
EPI506422 A/swine/Indiana/A00968351/2011 (A/H1N1) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%)
EPI475554 A/swine/Michigan/A01203374/2012 (A/H1N1) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%)
EPI461388 A/swine/Ohio/11SW208/2011 (A/H3N2) segment 1 (PB2) 4039.7 0.000000e+00 2249/2280 (98%)

PB2 matches 2011 cases

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