Rhiza Labs FluTracker Forum

The place to discuss the flu
It is currently Tue Oct 17, 2017 12:03 am

All times are UTC - 5 hours [ DST ]




Post new topic Reply to topic  [ 15 posts ]  Go to page Previous  1, 2
Author Message
PostPosted: Fri Aug 22, 2014 2:26 pm 
Offline

Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI516840 A/Iowa/04/2013 (A/H3N2) segment 3 (PA) 3973.3 0.000000e+00 2151/2151 (100%)
EPI482821 A/Iowa/04/2013 (A/H3N2) segment 3 (PA) 3956.6 0.000000e+00 2148/2151 (99%)
EPI397324 A/swine/Minnesota/4/2012 (A/H3N2) segment 3 (PA) 3879.1 0.000000e+00 2135/2152 (99%)
EPI526541 A/swine/Indiana/13TOSU1047/2013 (A/H1N2) segment 3 (PA) 3873.5 0.000000e+00 2134/2152 (99%)
EPI459221 A/swine/Minnesota/A01270355/2012 (A/H1N1) segment 3 (PA) 3868.0 0.000000e+00 2133/2152 (99%)
EPI459216 A/swine/Iowa/A01328941/2012 (A/H1N1) segment 3 (PA) 3868.0 0.000000e+00 2133/2152 (99%)
EPI459161 A/swine/Minnesota/A01279213/2012 (A/H1N1) segment 3 (PA) 3868.0 0.000000e+00 2133/2152 (99%)
EPI441156 A/swine/California/A00968789/2013 (A/H1N1) segment 3 (PA) 3862.5 0.000000e+00 2132/2152 (99%)
EPI526546 A/swine/Iowa/13TOSU0239/2013 (A/H1N1) segment 3 (PA) 3856.9 0.000000e+00 2132/2153 (99%)
EPI526526 A/swine/Iowa/13TOSU0240/2013 (A/H1N1) segment 3 (PA) 3856.9 0.000000e+00 2132/2153 (99%)
EPI443470 A/swine/Iowa/A01300194/2012 (A/H3N2) segment 3 (PA) 3856.9 0.000000e+00 2131/2152 (99%)
EPI526562 A/swine/Iowa/13TOSU0226/2013 (A/H1N1) segment 3 (PA) 3851.4 0.000000e+00 2131/2153 (98%)
EPI459178 A/swine/Iowa/A01432034/2012 (A/H1N2) segment 3 (PA) 3851.4 0.000000e+00 2130/2152 (98%)
EPI459089 A/swine/Minnesota/A01271731/2012 (A/H3N2) segment 3 (PA) 3851.4 0.000000e+00 2130/2152 (98%)
EPI433515 A/swine/Minnesota/A01267908/2012 (A/H1N1) segment 3 (PA) 3851.4 0.000000e+00 2130/2152 (98%)
EPI502415 A/swine/South Dakota/A01267922/2012 (A/H1N1) segment 3 (PA) 3845.8 0.000000e+00 2129/2152 (98%)
EPI416811 A/mink/South Dakota/A01279427/2012 (A/H1N1) segment 3 (PA) 3842.2 0.000000e+00 2128/2152 (98%)
EPI390769 A/swine/Illinois/A01049981/2011 (A/H1N1 pdm09) segment 3 (PA) 3834.8 0.000000e+00 2127/2152 (98%)
EPI390762 A/swine/Illinois/A01049980/2011 (A/H1N1) segment 3 (PA) 3834.8 0.000000e+00 2127/2152 (98%)
EPI538222 A/swine/Iowa/13H092/2013 (A/H3N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI538221 A/swine/Iowa/13H073/2013 (A/H3N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI538219 A/swine/Iowa/13H065/2013 (A/H3N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526577 A/swine/Indiana/13TOSU1143/2013 (A/H1N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526571 A/swine/Ohio/13TOSU2194/2013 (A/H3N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526563 A/swine/Ohio/13TOSU0736/2013 (A/H1N1) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526561 A/swine/Indiana/13TOSU1151/2013 (A/H1N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526554 A/swine/Ohio/13TOSU0733/2013 (A/H1N1) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526553 A/swine/Indiana/13TOSU0782/2013 (A/H1N1) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526552 A/swine/Indiana/13TOSU1145/2013 (A/H1N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526550 A/swine/Indiana/13TOSU1157/2013 (A/H1N1) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526549 A/swine/Indiana/13TOSU1051/2013 (A/H1N1) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526548 A/swine/Indiana/13TOSU1154/2013 (A/H1N1) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526533 A/swine/Indiana/13TOSU1158/2013 (A/H1N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526529 A/swine/Indiana/13TOSU1058/2013 (A/H1N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526519 A/swine/Indiana/13TOSU1160/2013 (A/H1N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526510 A/swine/Indiana/13TOSU1049/2013 (A/H1N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526507 A/swine/Indiana/13TOSU1052/2013 (A/H1N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526505 A/swine/Indiana/13TOSU1142/2013 (A/H1N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526504 A/swine/Indiana/13TOSU1148/2013 (A/H1N1) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526502 A/swine/Indiana/13TOSU1044/2013 (A/H1N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI526496 A/swine/Indiana/13TOSU1159/2013 (A/H1N1) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI464866 A/Ohio/05/2013 (A/H3N2) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI443440 A/swine/Minnesota/A01202597/2011 (A/H1N1) segment 3 (PA) 3823.7 0.000000e+00 2125/2152 (98%)
EPI538220 A/swine/Iowa/13H076/2013 (A/H3N2) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526578 A/swine/Ohio/13TOSU0735/2013 (A/H1N1) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526574 A/swine/Indiana/13TOSU1149/2013 (A/H1N2) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526573 A/swine/Indiana/13TOSU1144/2013 (A/H1N2) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526560 A/swine/Indiana/13TOSU0802/2013 (A/H1N1) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526559 A/swine/Ohio/13TOSU1674/2013 (A/H1N1) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526555 A/swine/Ohio/13TOSU2106/2013 (A/H1N1) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526547 A/swine/Ohio/13TOSU1958/2013 (A/H1N1) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526545 A/swine/Indiana/13TOSU0815/2013 (A/H1N1) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526539 A/swine/Indiana/13TOSU0820/2013 (A/H1N1) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526528 A/swine/Indiana/13TOSU0680/2013 (A/H1N1) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526525 A/swine/Indiana/13TOSU1319/2013 (A/H3N2) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526522 A/swine/Ohio/13TOSU2115/2013 (A/H1N1) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526521 A/swine/Indiana/13TOSU1045/2013 (A/H1N2) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526518 A/swine/Indiana/13TOSU0796/2013 (A/H1N1) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526517 A/swine/Indiana/13TOSU1060/2013 (A/H1N2) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526511 A/swine/Indiana/13TOSU1056/2013 (A/H1N2) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526509 A/swine/Indiana/13TOSU0675/2013 (A/H1N1) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526499 A/swine/Indiana/13TOSU1155/2013 (A/H3N2) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526497 A/swine/Indiana/13TOSU1053/2013 (A/H1N2) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI486001 A/swine/Indiana/13TOSU1128/2013 (A/H3N2) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI471101 A/Arkansas/14/2013 (A/H1N1) segment 3 (PA) 3818.1 0.000000e+00 2124/2152 (98%)
EPI526532 A/swine/Indiana/13TOSU1048/2013 (A/H1N2) segment 3 (PA) 3812.6 0.000000e+00 2123/2152 (98%)
EPI526513 A/swine/Ohio/13TOSU1948/2013 (A/H1N1) segment 3 (PA) 3812.6 0.000000e+00 2123/2152 (98%)
EPI482781 A/Arkansas/15/2013 (A/H1N1) segment 3 (PA) 3812.6 0.000000e+00 2123/2152 (98%)
EPI465369 A/Indiana/11/2013 (A/H3N2) segment 3 (PA) 3812.6 0.000000e+00 2123/2152 (98%)
EPI459206 A/swine/Minnesota/A01203885/2012 (A/H1N1) segment 3 (PA) 3812.6 0.000000e+00 2124/2153 (98%)
EPI390731 A/swine/Iowa/A01049950/2011 (A/H1N1) segment 3 (PA) 3812.6 0.000000e+00 2123/2152 (98%)
EPI390713 A/swine/Iowa/A01049894/2011 (A/H1N1) segment 3 (PA) 3812.6 0.000000e+00 2123/2152 (98%)
EPI390708 A/swine/Minnesota/A01049893/2011 (A/H1N1) segment 3 (PA) 3812.6 0.000000e+00 2123/2152 (98%)
EPI526544 A/swine/Texas/13TOSU0035/2013 (A/H1N1) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI526540 A/swine/Ohio/13TOSU1020/2013 (A/H1N1) segment 3 (PA) 3807.1 0.000000e+00 2123/2153 (98%)
EPI526537 A/swine/Ohio/13TOSU1522/2013 (A/H1N1) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI526534 A/swine/Ohio/13TOSU1010/2013 (A/H1N1) segment 3 (PA) 3807.1 0.000000e+00 2123/2153 (98%)
EPI526530 A/swine/Ohio/13TOSU1529/2013 (A/H1N1) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI526524 A/swine/Ohio/13TOSU1541/2013 (A/H3N2) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI526516 A/swine/Indiana/13TOSU0504/2013 (A/H1N1) segment 3 (PA) 3807.1 0.000000e+00 2123/2153 (98%)
EPI507196 A/swine/Illinois/A01427335/2013 (A/H1N1) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI504867 A/swine/South Dakota/SJ1319788/2013 (A/H1N1) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI493704 A/swine/Iowa/13E088/2013 (A/H1N1) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI485998 A/swine/Indiana/13TOSU1122/2013 (A/H3N2) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI476710 A/swine/Michigan/A01259074/2013 (A/H3N2) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI468215 A/swine/Indiana/13TOSU486/2013 (A/H1N1) segment 3 (PA) 3807.1 0.000000e+00 2123/2153 (98%)
EPI467542 A/swine/Illinois/A00857317F/2012 (A/H1N1) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI467214 A/Indiana/21/2013 (A/H3N2) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI465361 A/Illinois/03/2013 (A/H3N2) segment 3 (PA) 3807.1 0.000000e+00 2116/2143 (98%)
EPI443430 A/swine/Minnesota/A01134332/2010 (A/H1N2) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI391560 A/swine/Illinois/A01104011/2012 (A/H1N1) segment 3 (PA) 3807.1 0.000000e+00 2122/2152 (98%)
EPI526495 A/swine/Indiana/13TOSU1043/2013 (A/H1N1) segment 3 (PA) 3801.5 0.000000e+00 2122/2153 (98%)
EPI398554 A/swine/Illinois/A01116190/2011 (A/H3N2) segment 3 (PA) 3801.5 0.000000e+00 2121/2152 (98%)
EPI531510 A/swine/Oklahoma/A01202498/2011 (A/H1N2) segment 3 (PA) 3796.0 0.000000e+00 2121/2153 (98%)
EPI526498 A/swine/Indiana/13TOSU1316/2013 (A/H1N1) segment 3 (PA) 3796.0 0.000000e+00 2120/2152 (98%)
EPI492662 A/swine/Illinois/A01227426/2013 (A/H1N1) segment 3 (PA) 3796.0 0.000000e+00 2121/2153 (98%)
EPI450174 A/swine/Ohio/12TOSU45/2012 (A/H1N1) segment 3 (PA) 3796.0 0.000000e+00 2120/2152 (98%)
EPI450173 A/swine/Ohio/12TOSU44/2012 (A/H1N1) segment 3 (PA) 3796.0 0.000000e+00 2120/2152 (98%)
EPI347051 A/Minnesota/24/2009 (A/H1N1 pdm09) segment 3 (PA) 3796.0 0.000000e+00 2120/2152 (98%)
EPI485938 A/swine/Michigan/A01259075/2013 (A/H1N1) segment 3 (PA) 3790.4 0.000000e+00 2120/2153 (98%)

_________________
www.twitter.com/hniman


Top
 Profile  
 
PostPosted: Fri Aug 22, 2014 2:27 pm 
Offline

Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI516837 A/Iowa/04/2013 (A/H3N2) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%)
EPI482818 A/Iowa/04/2013 (A/H3N2) segment 5 (NP) 2765.6 0.000000e+00 1497/1497 (100%)
EPI527989 A/swine/Ohio/13TOSU0888/2013 (A/H1N2) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%)
EPI527973 A/swine/Ohio/13TOSU0736/2013 (A/H1N1) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%)
EPI527928 A/swine/Indiana/13TOSU0782/2013 (A/H1N1) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%)
EPI527139 A/swine/Ohio/13TOSU1529/2013 (A/H1N1) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%)
EPI526888 A/swine/Indiana/13TOSU0796/2013 (A/H1N1) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%)
EPI493632 A/swine/Iowa/13E088/2013 (A/H1N1) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%)
EPI471103 A/Arkansas/14/2013 (A/H1N1) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%)
EPI459208 A/swine/Minnesota/A01203885/2012 (A/H1N1) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%)
EPI459091 A/swine/Minnesota/A01271731/2012 (A/H3N2) segment 5 (NP) 2726.8 0.000000e+00 1490/1497 (99%)
EPI527891 A/swine/Indiana/13TOSU1157/2013 (A/H1N1) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%)
EPI527857 A/swine/Indiana/13TOSU0815/2013 (A/H1N1) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%)
EPI526893 A/swine/Indiana/13TOSU1159/2013 (A/H1N1) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%)
EPI482778 A/Arkansas/15/2013 (A/H1N1) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%)
EPI459218 A/swine/Iowa/A01328941/2012 (A/H1N1) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%)
EPI459180 A/swine/Iowa/A01432034/2012 (A/H1N2) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%)
EPI441152 A/swine/South Dakota/A01267895/2012 (A/H1N1) segment 5 (NP) 2721.2 0.000000e+00 1489/1497 (99%)
EPI538983 A/swine/Iowa/13H092/2013 (A/H3N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%)
EPI538976 A/swine/Iowa/13H073/2013 (A/H3N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%)
EPI538969 A/swine/Iowa/13H076/2013 (A/H3N2) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%)
EPI528460 A/swine/Ohio/13TOSU0735/2013 (A/H1N1) segment 5 (NP) 2715.7 0.000000e+00 1489/1498 (99%)
EPI527935 A/swine/Ohio/13TOSU1674/2013 (A/H1N1) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%)
EPI527933 A/swine/Ohio/13TOSU0733/2013 (A/H1N1) segment 5 (NP) 2715.7 0.000000e+00 1489/1498 (99%)
EPI527888 A/swine/Indiana/13TOSU1051/2013 (A/H1N1) segment 5 (NP) 2715.7 0.000000e+00 1489/1498 (99%)
EPI527187 A/swine/Ohio/13TOSU1522/2013 (A/H1N1) segment 5 (NP) 2715.7 0.000000e+00 1489/1498 (99%)
EPI507418 A/swine/Illinois/A01427335/2013 (A/H1N1) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%)
EPI502405 A/swine/South Dakota/A01267922/2012 (A/H1N1) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%)
EPI459223 A/swine/Minnesota/A01270355/2012 (A/H1N1) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%)
EPI416813 A/mink/South Dakota/A01279427/2012 (A/H1N1) segment 5 (NP) 2715.7 0.000000e+00 1488/1497 (99%)
EPI397325 A/swine/Minnesota/4/2012 (A/H3N2) segment 5 (NP) 2715.7 0.000000e+00 1489/1498 (99%)
EPI538962 A/swine/Iowa/13H065/2013 (A/H3N2) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%)
EPI527970 A/swine/Iowa/13TOSU0226/2013 (A/H1N1) segment 5 (NP) 2710.2 0.000000e+00 1488/1498 (99%)
EPI527886 A/swine/Indiana/13TOSU1154/2013 (A/H1N1) segment 5 (NP) 2710.2 0.000000e+00 1488/1498 (99%)
EPI527884 A/swine/Ohio/13TOSU1958/2013 (A/H1N1) segment 5 (NP) 2710.2 0.000000e+00 1488/1498 (99%)
EPI527861 A/swine/Iowa/13TOSU0239/2013 (A/H1N1) segment 5 (NP) 2710.2 0.000000e+00 1488/1498 (99%)
EPI527128 A/swine/Indiana/13TOSU0680/2013 (A/H1N1) segment 5 (NP) 2710.2 0.000000e+00 1488/1498 (99%)
EPI527108 A/swine/Iowa/13TOSU0240/2013 (A/H1N1) segment 5 (NP) 2710.2 0.000000e+00 1488/1498 (99%)
EPI527018 A/swine/Ohio/13TOSU1948/2013 (A/H1N1) segment 5 (NP) 2710.2 0.000000e+00 1488/1498 (99%)
EPI526958 A/swine/Indiana/13TOSU1148/2013 (A/H1N1) segment 5 (NP) 2710.2 0.000000e+00 1488/1498 (99%)
EPI459142 A/swine/Minnesota/A01279213/2012 (A/H1N1) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%)
EPI441158 A/swine/California/A00968789/2013 (A/H1N1) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%)
EPI433516 A/swine/Minnesota/A01267908/2012 (A/H1N1) segment 5 (NP) 2710.2 0.000000e+00 1487/1497 (99%)
EPI528464 A/swine/Texas/13TOSU0050/2013 (A/H1N1) segment 5 (NP) 2704.6 0.000000e+00 1487/1498 (99%)
EPI527198 A/swine/Indiana/13TOSU0820/2013 (A/H1N1) segment 5 (NP) 2704.6 0.000000e+00 1487/1498 (99%)
EPI527102 A/swine/Ohio/13TOSU2106/2013 (A/H1N1) segment 5 (NP) 2704.6 0.000000e+00 1487/1498 (99%)
EPI527066 A/swine/Ohio/13TOSU2115/2013 (A/H1N1) segment 5 (NP) 2704.6 0.000000e+00 1487/1498 (99%)
EPI527942 A/swine/Indiana/13TOSU0802/2013 (A/H1N1) segment 5 (NP) 2699.1 0.000000e+00 1487/1499 (99%)
EPI526987 A/swine/Indiana/13TOSU0675/2013 (A/H1N1) segment 5 (NP) 2699.1 0.000000e+00 1487/1499 (99%)
EPI527982 A/swine/Ohio/13TOSU1238/2013 (A/H3N2) segment 5 (NP) 2693.5 0.000000e+00 1486/1499 (99%)
EPI527854 A/swine/Texas/13TOSU0035/2013 (A/H1N1) segment 5 (NP) 2688.0 0.000000e+00 1485/1499 (99%)
EPI526916 A/swine/Indiana/13TOSU1316/2013 (A/H1N1) segment 5 (NP) 2688.0 0.000000e+00 1486/1500 (99%)
EPI504909 A/swine/South Dakota/SJ1319788/2013 (A/H1N1) segment 5 (NP) 2682.5 0.000000e+00 1483/1498 (98%)
EPI424051 A/swine/Iowa/A01202576/2011 (A/H1N2) segment 5 (NP) 2676.9 0.000000e+00 1481/1497 (98%)
EPI502598 A/swine/Minnesota/A01203313/2012 (A/H1N1) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%)
EPI493681 A/swine/Iowa/13E078/2013 (A/H1N1) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%)
EPI493656 A/swine/Iowa/13E100/2013 (A/H1N1) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%)
EPI468717 A/swine/Minnesota/A01301732/2012 (A/H1N1) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%)
EPI465157 A/swine/Minnesota/A00907734/2011 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%)
EPI465153 A/swine/Minnesota/A00907733/2011 (A/H3N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%)
EPI441123 A/swine/Minnesota/A01202471/2011 (A/H1N2) segment 5 (NP) 2671.4 0.000000e+00 1480/1497 (98%)
EPI443421 A/swine/Iowa/A01267774/2012 (A/H1N2) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%)
EPI414227 A/swine/Minnesota/A01240127/2011 (A/H3N2) segment 5 (NP) 2665.8 0.000000e+00 1479/1497 (98%)
EPI489073 A/swine/Arkansas/SG1376/2011 (A/H1N2) segment 5 (NP) 2660.3 0.000000e+00 1479/1498 (98%)
EPI465124 A/swine/Illinois/A01202825/2011 (A/H3N2) segment 5 (NP) 2660.3 0.000000e+00 1478/1497 (98%)
EPI443431 A/swine/Minnesota/A01134332/2010 (A/H1N2) segment 5 (NP) 2660.3 0.000000e+00 1479/1498 (98%)
EPI441143 A/swine/Wisconsin/A01203142/2012 (A/H1N1) segment 5 (NP) 2660.3 0.000000e+00 1478/1497 (98%)
EPI441138 A/swine/Iowa/A01203125/2012 (A/H1N2) segment 5 (NP) 2660.3 0.000000e+00 1478/1497 (98%)
EPI489143 A/swine/North Carolina/SG1391/2011 (A/H1N2) segment 5 (NP) 2654.8 0.000000e+00 1478/1498 (98%)
EPI347197 A/swine/Ohio/FAH10-1/2010 (A/H1N2) segment 5 (NP) 2654.8 0.000000e+00 1476/1495 (98%)
EPI506434 A/swine/Indiana/A00968332/2011 (A/H1N2) segment 5 (NP) 2649.2 0.000000e+00 1478/1499 (98%)
EPI490780 A/swine/Arkansas/SG1382/2011 (A/H1N2) segment 5 (NP) 2649.2 0.000000e+00 1477/1498 (98%)
EPI489157 A/swine/Indiana/04254/2011 (A/H1N2) segment 5 (NP) 2649.2 0.000000e+00 1478/1499 (98%)
EPI489094 A/swine/Arkansas/SG1383/2011 (A/H1N2) segment 5 (NP) 2649.2 0.000000e+00 1477/1498 (98%)
EPI489087 A/swine/Arkansas/SG1378/2011 (A/H1N2) segment 5 (NP) 2649.2 0.000000e+00 1477/1498 (98%)
EPI459214 A/swine/Illinois/A01134580/2011 (A/H1N2) segment 5 (NP) 2649.2 0.000000e+00 1478/1499 (98%)
EPI433475 A/swine/Indiana/A01203372/2012 (A/H3N2) segment 5 (NP) 2649.2 0.000000e+00 1477/1498 (98%)
EPI390742 A/swine/Indiana/A01049953/2011 (A/H1N2) segment 5 (NP) 2649.2 0.000000e+00 1478/1499 (98%)
EPI490775 A/swine/Arkansas/SG1381/2011 (A/H1N2) segment 5 (NP) 2643.7 0.000000e+00 1476/1498 (98%)
EPI459137 A/swine/South Dakota/A01279279/2012 (A/H3N2) segment 5 (NP) 2643.7 0.000000e+00 1475/1497 (98%)
EPI393321 A/swine/Illinois/A01047363/2011 (A/H1N2) segment 5 (NP) 2643.7 0.000000e+00 1476/1498 (98%)
EPI390709 A/swine/Minnesota/A01049893/2011 (A/H1N1) segment 5 (NP) 2643.7 0.000000e+00 1476/1498 (98%)
EPI384067 A/swine/Minnesota/A01116381/2011 (A/H3N2) segment 5 (NP) 2640.0 0.000000e+00 1475/1498 (98%)
EPI506470 A/swine/Iowa/A01300451/2012 (A/H3N2) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%)
EPI506442 A/swine/Iowa/A01300445/2012 (A/H3N2) segment 5 (NP) 2638.1 0.000000e+00 1474/1497 (98%)
EPI490770 A/swine/Arkansas/SG1379/2011 (A/H1N2) segment 5 (NP) 2638.1 0.000000e+00 1475/1498 (98%)
EPI489101 A/swine/Arkansas/SG1384/2011 (A/H1N2) segment 5 (NP) 2638.1 0.000000e+00 1475/1498 (98%)
EPI489080 A/swine/Arkansas/SG1377/2011 (A/H1N2) segment 5 (NP) 2638.1 0.000000e+00 1475/1498 (98%)
EPI489066 A/swine/Arkansas/SG1375/2011 (A/H1N2) segment 5 (NP) 2638.1 0.000000e+00 1475/1498 (98%)
EPI451197 A/swine/Ohio/A01116889/2011 (A/H1N2) segment 5 (NP) 2638.1 0.000000e+00 1475/1498 (98%)
EPI401661 A/swine/Minnesota/12/2012 (A/H1N2) segment 5 (NP) 2638.1 0.000000e+00 1475/1498 (98%)
EPI459233 A/swine/Nebraska/A01270646/2012 (A/H1N2) segment 5 (NP) 2632.6 0.000000e+00 1473/1497 (98%)
EPI391578 A/swine/Illinois/A00857318a/2012 (A/H3N2) segment 5 (NP) 2632.6 0.000000e+00 1474/1498 (98%)
EPI391551 A/swine/Illinois/A00857131/2011 (A/H1N2) segment 5 (NP) 2632.6 0.000000e+00 1475/1499 (98%)
EPI295325 A/swine/Minnesota/165A/2009 (A/H1N1 pdm09) segment 5 (NP) 2632.6 0.000000e+00 1474/1498 (98%)
EPI295292 A/swine/Minnesota/074A/2009 (A/H1N1 pdm09) segment 5 (NP) 2632.6 0.000000e+00 1474/1498 (98%)
EPI295284 A/swine/Minnesota/074A/2009 (A/H1N1 pdm09) segment 5 (NP) 2632.6 0.000000e+00 1474/1498 (98%)
EPI255003 A/New York/7019/2009 (A/H1N1 pdm09) segment 5 (NP) 2632.6 0.000000e+00 1474/1498 (98%)
EPI251914 A/Wisconsin/55/2009 (A/H1N1 pdm09) segment 5 (NP) 2632.6 0.000000e+00 1474/1498 (98%)
EPI247979 A/Wisconsin/629-D00802/2009 (A/H1N1 pdm09) segment 5 (NP) 2632.6 0.000000e+00 1474/1498 (98%)

_________________
www.twitter.com/hniman


Top
 Profile  
 
PostPosted: Fri Aug 22, 2014 2:30 pm 
Offline

Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
EPI516838 A/Iowa/04/2013 (A/H3N2) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%)
EPI482819 A/Iowa/04/2013 (A/H3N2) segment 8 (NS) 1548.6 0.000000e+00 838/838 (100%)
EPI538986 A/swine/Iowa/13H092/2013 (A/H3N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI538979 A/swine/Iowa/13H073/2013 (A/H3N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI538972 A/swine/Iowa/13H076/2013 (A/H3N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI538965 A/swine/Iowa/13H065/2013 (A/H3N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI528434 A/swine/Indiana/13TOSU1042/2013 (A/H3N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI528004 A/swine/Ohio/13TOSU1221/2013 (A/H3N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI527966 A/swine/Indiana/13TOSU0802/2013 (A/H1N1) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI527931 A/swine/Indiana/13TOSU0782/2013 (A/H1N1) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI527914 A/swine/Indiana/13TOSU1051/2013 (A/H1N1) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI527909 A/swine/Indiana/13TOSU1154/2013 (A/H1N1) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI527869 A/swine/Indiana/13TOSU1050/2013 (A/H3N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI527214 A/swine/Indiana/13TOSU0820/2013 (A/H1N1) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI527169 A/swine/Indiana/13TOSU1048/2013 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI527165 A/swine/Indiana/13TOSU1058/2013 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI527078 A/swine/Indiana/13TOSU1060/2013 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI527035 A/swine/Indiana/13TOSU1056/2013 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI526944 A/swine/Indiana/13TOSU1053/2013 (A/H1N2) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI526908 A/swine/Indiana/13TOSU1159/2013 (A/H1N1) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI507421 A/swine/Illinois/A01427335/2013 (A/H1N1) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI441161 A/swine/California/A00968789/2013 (A/H1N1) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI441153 A/swine/South Dakota/A01267895/2012 (A/H1N1) segment 8 (NS) 1526.5 0.000000e+00 834/838 (99%)
EPI528485 A/swine/Ohio/13TOSU0735/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI528444 A/swine/Ohio/13TOSU2194/2013 (A/H3N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI527997 A/swine/Ohio/13TOSU0736/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI527960 A/swine/Ohio/13TOSU1674/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI527957 A/swine/Ohio/13TOSU0733/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI527904 A/swine/Ohio/13TOSU1958/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI527881 A/swine/Indiana/13TOSU0815/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI527211 A/swine/Ohio/13TOSU1522/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI527167 A/swine/Ohio/13TOSU1529/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI527164 A/swine/Indiana/13TOSU0680/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI527038 A/swine/Ohio/13TOSU1948/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI527033 A/swine/Indiana/13TOSU0675/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI526946 A/swine/Indiana/13TOSU1316/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI526906 A/swine/Indiana/13TOSU0796/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI482779 A/Arkansas/15/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI471106 A/Arkansas/14/2013 (A/H1N1) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI465359 A/Illinois/03/2013 (A/H3N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI464864 A/Ohio/05/2013 (A/H3N2) segment 8 (NS) 1520.9 0.000000e+00 833/838 (99%)
EPI527123 A/swine/Ohio/13TOSU2106/2013 (A/H1N1) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI527082 A/swine/Ohio/13TOSU2115/2013 (A/H1N1) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI493684 A/swine/Iowa/13E078/2013 (A/H1N1) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI493659 A/swine/Iowa/13E100/2013 (A/H1N1) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI493635 A/swine/Iowa/13E088/2013 (A/H1N1) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI459222 A/swine/Minnesota/A01270355/2012 (A/H1N1) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI459217 A/swine/Iowa/A01328941/2012 (A/H1N1) segment 8 (NS) 1515.4 0.000000e+00 832/838 (99%)
EPI502431 A/swine/Indiana/A01260109/2012 (A/H1N1) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI468241 A/swine/Illinois/A01327868/2012 (A/H3N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI459207 A/swine/Minnesota/A01203885/2012 (A/H1N1) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI459090 A/swine/Minnesota/A01271731/2012 (A/H3N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI397667 A/Minnesota/14/2012 (A/H1N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI395301 A/Minnesota/14/2012 (A/H1N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI393704 A/Minnesota/12/2012 (A/H1N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI393181 A/swine/Illinois/A01240774/2011 (A/H3N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI389987 A/swine/Illinois/A01240784/2011 (A/H3N2) segment 8 (NS) 1509.8 0.000000e+00 831/838 (99%)
EPI527918 A/swine/Indiana/13TOSU1157/2013 (A/H1N1) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%)
EPI527882 A/swine/Iowa/13TOSU0239/2013 (A/H1N1) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%)
EPI527876 A/swine/Texas/13TOSU0035/2013 (A/H1N1) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%)
EPI527124 A/swine/Iowa/13TOSU0240/2013 (A/H1N1) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%)
EPI526990 A/swine/Indiana/13TOSU1148/2013 (A/H1N1) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%)
EPI468237 A/swine/Illinois/A01327396/2012 (A/H3N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%)
EPI465149 A/swine/Ilinois/A01240775/2011 (A/H3N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%)
EPI459202 A/swine/Iowa/A01203809/2012 (A/H1N1) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%)
EPI459141 A/swine/Minnesota/A01279213/2012 (A/H1N1) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%)
EPI459109 A/swine/Illinois/A01203923/2012 (A/H1N1) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%)
EPI351676 A/swine/Iowa/A01202709/2011 (A/H3N2) segment 8 (NS) 1504.3 0.000000e+00 830/838 (99%)
EPI527863 A/swine/Ohio/13TOSU1020/2013 (A/H1N1) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%)
EPI527207 A/swine/Ohio/13TOSU1010/2013 (A/H1N1) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%)
EPI527077 A/swine/Indiana/13TOSU0504/2013 (A/H1N1) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%)
EPI502406 A/swine/South Dakota/A01267922/2012 (A/H1N1) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%)
EPI468194 A/swine/Indiana/13TOSU486/2013 (A/H1N1) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%)
EPI459179 A/swine/Iowa/A01432034/2012 (A/H1N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%)
EPI443443 A/swine/Minnesota/A01202597/2011 (A/H1N1) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%)
EPI401665 A/swine/Minnesota/A01301731/2012 (A/H1N2) segment 8 (NS) 1498.8 0.000000e+00 830/839 (98%)
EPI401635 A/swine/Iowa/A01202774/2011 (A/H1N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%)
EPI397326 A/swine/Minnesota/4/2012 (A/H3N2) segment 8 (NS) 1498.8 0.000000e+00 829/838 (98%)
EPI531513 A/swine/Oklahoma/A01202498/2011 (A/H1N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%)
EPI528474 A/swine/Indiana/13TOSU1998/2013 (A/H1N1) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%)
EPI527962 A/swine/Indiana/13TOSU1989/2013 (A/H1N1) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%)
EPI527921 A/swine/Indiana/13TOSU1988/2013 (A/H1N1) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%)
EPI527168 A/swine/Indiana/13TOSU1996/2013 (A/H1N1) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%)
EPI527076 A/swine/Indiana/13TOSU1993/2013 (A/H1N1) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%)
EPI526949 A/swine/Indiana/13TOSU1994/2013 (A/H1N1) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%)
EPI492619 A/swine/Illinois/A01227426/2013 (A/H1N1) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%)
EPI397306 A/swine/Minnesota/2/2012 (A/H3N2) segment 8 (NS) 1493.2 0.000000e+00 828/838 (98%)
EPI492229 A/swine/Oklahoma/02083/2008 (A/H1N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
EPI490718 A/swine/Oklahoma/02530/2009 (A/H3N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
EPI489172 A/swine/Minnesota/SG1402/2011 (A/H1N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
EPI488822 A/swine/Oklahoma/02056/2008 (A/H1N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
EPI488815 A/swine/Oklahoma/02107/2008 (A/H1N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
EPI443417 A/swine/Minnesota/18/2012 (A/H3N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
EPI398556 A/swine/Illinois/A01116190/2011 (A/H3N2) segment 8 (NS) 1487.7 0.000000e+00 828/839 (98%)
EPI220928 A/swine/Texas/050593/2008 (A/H1N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
EPI220895 A/swine/Oklahoma/032726/2008 (A/H1N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
EPI220871 A/swine/Oklahoma/020734-3/2008 (A/H1N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
EPI220855 A/swine/Oklahoma/016179-9/2008 (A/H1N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
EPI220839 A/swine/Oklahoma/011521-5/2008 (A/H1N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)
EPI220831 A/swine/Oklahoma/011521-4/2008 (A/H1N2) segment 8 (NS) 1487.7 0.000000e+00 827/838 (98%)

_________________
www.twitter.com/hniman


Top
 Profile  
 
PostPosted: Tue Aug 26, 2014 8:36 am 
Offline

Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
CDC: Variant H3N2 case reported in Ohio

Ohio last week reported a case of variant H3N2 (H3N2v) influenza in a person who had had close contact with pigs, the US Centers for Disease Control and Prevention (CDC) reported on Aug 22, marking what appears to be the first such US case this summer.

The infected person was hospitalized but has recovered completely, the CDC said in its weekly FluView surveillance report.

Public health and agriculture officials are investigating the extent of disease among humans and swine and have found no ongoing transmission of the virus or increases in flu-like illness, the CDC said.

H3N2v surfaced in 2011, with 12 cases, and took off in the summer of 2012, with 309 cases, followed by 19 cases last year, according to the CDC. Nearly all of them involved people who had contact with swine at county and state fairs.

Most illnesses have been mild, but 17 people were hospitalized in 2012 and 2013, and there was one death in 2012, according to the CDC. H3N2v viruses have spread from person to person in a few instances, but there has been no sustained transmission.

The CDC said it sequenced the Ohio patient's virus and found it has a slightly different combination of internal genes than H3N2v viruses reported in previous years. The Ohio isolate contained both the nucleoprotein (NP) and matrix (M) genes from the 2009 H1N1virus, whereas the earlier isolates contained only the M gene from 2009 H1N1.

"However, this H3N2v virus has the same genetic composition as influenza viruses previously isolated from swine in the U.S. this summer," the agency said.
Aug 22 CDC FluView report
CDC H3N2v case-count table

http://www.cidrap.umn.edu/news-perspect ... ug-25-2014

_________________
www.twitter.com/hniman


Top
 Profile  
 
PostPosted: Tue Aug 26, 2014 11:46 am 
Offline

Joined: Wed Aug 19, 2009 10:42 am
Posts: 56044
Location: Pittsburgh, PA USA
Sequence thread

viewtopic.php?f=5&t=12136

_________________
www.twitter.com/hniman


Top
 Profile  
 
Display posts from previous:  Sort by  
Post new topic Reply to topic  [ 15 posts ]  Go to page Previous  1, 2

All times are UTC - 5 hours [ DST ]


Who is online

Users browsing this forum: Yahoo [Bot] and 65 guests


You cannot post new topics in this forum
You cannot reply to topics in this forum
You cannot edit your posts in this forum
You cannot delete your posts in this forum
You cannot post attachments in this forum

Search for:
Jump to:  
cron
Powered by phpBB® Forum Software © phpBB Group