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 Forum: General Discussion   Topic: Fujian H5N2 In Nebraska Matches Iowa Sub-clade

Posted: Thu Oct 15, 2015 11:26 am 

Replies: 9
Views: 2078


EPI662732 A/chicken/Nebraska/15-017990-5/2015 (A/H5N2) segment 6 (NA) 2604.9 0.000000e+00 1410/1410 (100%) EPI662696 A/chicken/Nebraska/15-017897-1/2015 (A/H5N2) segment 6 (NA) 2604.9 0.000000e+00 1410/1410 (100%) EPI620459 A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 6 (NA) 2599.4 0.000000e+00 1409...

 Forum: General Discussion   Topic: Fujian H5N2 In Nebraska Matches Iowa Sub-clade

Posted: Thu Oct 15, 2015 11:25 am 

Replies: 9
Views: 2078


EPI662730 A/chicken/Nebraska/15-017990-5/2015 (A/H5N2) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI662694 A/chicken/Nebraska/15-017897-1/2015 (A/H5N2) segment 4 (HA) 3147.8 0.000000e+00 1704/1704 (100%) EPI620422 A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 4 (HA) 3147.8 0.000000e+00 1704...

 Forum: General Discussion   Topic: Fujian H5N2 In Nebraska Matches Iowa Sub-clade

Posted: Thu Oct 15, 2015 11:22 am 

Replies: 9
Views: 2078


Isolate name: A/chicken/Nebraska/15-017990-5/2015 Isolate ID: EPI_ISL_199552 Passage details/history: Type: A / H5N2 Lineage: Sample information Collection date: 2015-05-29 Host Gallus gallus Additional host information: Domestic status: Is vaccinated: Location: United States / Nebraska / Dixon Coun...

 Forum: General Discussion   Topic: Fujian H5N2 In Nebraska Matches Iowa Sub-clade

Posted: Thu Oct 15, 2015 11:19 am 

Replies: 9
Views: 2078


Newly released APHIS Fujian H5N2 sequences from Nebraska match novel sub-clade in Iowa.

 Forum: General Discussion   Topic: Fujian H5N2 Dixon County Nebraska Matches

Posted: Thu Oct 15, 2015 9:56 am 

Replies: 10
Views: 2627


edit Name Isolate ID Subtype Passage PB2 PB1 PA HA NP NA MP NS HE P3 Collection date editNameIsolate IDSubtypePassagePB2PB1PAHANPNAMPNSHEP3Collection date A/chicken/Wisconsin/15-012160-1/2015 EPI_ISL_199554 H5N2 2287 2290 2182 1744 1524 1426 987 850 --- --- 2015-04-13 A/chicken/Wisconsin/15-011595-1...

 Forum: General Discussion   Topic: Fujian H5N2 Dixon County Nebraska Matches

Posted: Wed Oct 14, 2015 12:03 pm 

Replies: 10
Views: 2627


EPI620461 A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI620447 A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI620440 A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 8 (NS) 1537.5 0.000000e+00 836/838 (99%) EPI620433 A/t...

 Forum: General Discussion   Topic: Fujian H5N2 Dixon County Nebraska Matches

Posted: Wed Oct 14, 2015 12:01 pm 

Replies: 10
Views: 2627


EPI620458 A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI620451 A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI620437 A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 5 (NP) 2760.0 0.000000e+00 1496/1497 (99%) EPI6204...

 Forum: General Discussion   Topic: Fujian H5N2 Dixon County Nebraska Matches

Posted: Wed Oct 14, 2015 11:59 am 

Replies: 10
Views: 2627


EPI620404 A/chicken/Iowa/14399-4/2015 (A/H5N2) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI620403 A/chicken/Iowa/14322-6/2015 (A/H5N2) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI620402 A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 3 (PA) 3962.2 0.000000e+00 2149/2151 (99%) EPI6204...

 Forum: General Discussion   Topic: Fujian H5N2 Dixon County Nebraska Matches

Posted: Wed Oct 14, 2015 11:58 am 

Replies: 10
Views: 2627


EPI620456 A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 2 (PB1) 4189.3 0.000000e+00 2272/2274 (99%) EPI620435 A/turkey/Iowa/14319-1/2015 (A/H5N2) segment 2 (PB1) 4189.3 0.000000e+00 2272/2274 (99%) EPI620428 A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 2 (PB1) 4189.3 0.000000e+00 2272/2274 (99%) EPI62...

 Forum: General Discussion   Topic: Fujian H5N2 Dixon County Nebraska Matches

Posted: Wed Oct 14, 2015 11:55 am 

Replies: 10
Views: 2627


EPI620455 A/chicken/Iowa/14589-1/2015 (A/H5N2) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI620427 A/turkey/Iowa/14318-1/2015 (A/H5N2) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) EPI620420 A/chicken/Iowa/13542-2/2015 (A/H5N2) segment 1 (PB2) 4211.5 0.000000e+00 2280/2280 (100%) E...
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